Spo05119.1 (mRNA)

Overview
NameSpo05119.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionZinc finger CCCH domain-containing protein 56
Locationchr3 : 9339938 .. 9344374 (+)
Sequence length1912
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATTACTTCATATCACATGGGATTTGTTGTAGTAATAATTTTTTGGTAAAACTCAGTCAAACCGTACAGAATTAGAACCAAAAAAAAAAAATCTAGTGCTATATTATCCGCCATCTTCTGATTCTTCTCTGCTCCTCTTCATCACTACAACTCTACAAGTCTACAACAAACAAATCCCATACACCATTGTTGATCATGGATTCCTGGTAATCTCACTTTCTCTGTAAGTTTCCCACAAGTTCTCTGTAACTTAAGATTCTCTAATATCTCCTCGATTTTCGCAAACTCCCAATTTTGAAGGTAGGGGTGGGTGGAATCTGCTTATCTTATCTTACAATTATGCTAAAGTTTTCATTTGAGTACTTGAAAATGTGATATTTTCCTTGAATTTCATGTGCATTTTGCAGTTTAAGTTGAAATTTTCTCAACTGTAATTTCTGGGTTTTCATTTTGCTGCTGGTGACTGGTGACTGGTGGGCTCTTCTGCATTCAATTCATCTTTTTTTTATCTGATTTAGTTTAATTTAAGGTGGTGTACGAAATTCCCCAAAAATCTTAGCTTTAATTTTGCTCAATTTTGATGTTGACGAAAAATTAGGGCTTTTGGGTTTCGTCTTCGCAATTGGGGTTTAGAGAATTAGGTTTTCTATCTAGGGGATTGATTTTTGCACTTTTGGGATGGATTTTGGAACTGAATCAGGGTTTTCGGAAATGGGTGGAGCATTTGACAATTGGGGTGGTGTTGGTCCAAATGATCAGGCAATTTGGGCAACTGAAGATGAGTATAGAAATTGGAATAATAGTGAAACAACCAGTTACCACCTACCTCCACTGCTCCGTATGGGATCAGGTGGCGGAGCTGAGCCTCCCAATAAAAAGACTAGGAGCTCCTCCCAGAGTGGCGGCGATGCTGCGGCGAGCCGCTCAAAAGCAATTGGGAAGATGTTTTACAAGACTAAGTTATGCTGTAAGTTTCGTGCCGGGGTTTGCCCTTATGTCACTAACTGTAATTTTGCTCATGGCCTGGAAGAGCTCCGGAAACCGCCACCAAACTGGCAAGAGATTGTGGCGGCGCACGAGGAGGAGAGGGGTGTTACCGTCGAACAAAGAGAGGAGCACCAGATACCTACAATTAGCACCTCTGAATTGAGGAATGAATCTCCTAGGACCTATAAAGGGAGGCATTGTAAGAAGTTTTACACTGAAGAGGGTTGCCCTTATGGAGAAAATTGCACCTTTCTTCATGATGAACAATCTAGAGCTAGAGAGAGTGTGGCAATAAGTGTGAATCCCACCGTTGGCGGCGGCACCGCTTATGGTGCTAATGGTCCTACTCAGAAGCCTTCGAATTGGAAGACCAGGATTTGTAACAAGTGGGAGACTACTGGTAGCTGCCCATTTGGGAGCAAGTGCCATTTTGCCCATGGATTAGCAGGTATTATTCATCCGCTTCCAAGATTGTTGTTTAATTGTACTTATTGTTTGATATGTATTCGTTGCATTCACTGTGGAGATAAAACTTGCTATGAGCTTAGAAAATTGCTTTGTCTTCTTTTGTTAAACTTAATTTTGAGTGCCATCATGAATTCATTTATGCTCATCTTTTCTAGACAAAAAGTGGGAAATGCACTCCATGTTTCCAAATCAGGGTGAAACACATTTCTTTTGGGTTCAAATGGGGGCTTAGGAATACATGTAACAGACATTTTCTTAAATAGTAGCGACATGATTCCTGAACTACAGCCATATAAGGGAGCTCCGGAGCTGATTCATCCTTACATTTACTTGTTCTTATACGTAGCCTGGCTGTCCTGGCGTTCCTTTCATTCTAATTTGAAAGCAATCTTTCTCCTGCTAAATTGCATCTTTCTCTAACTTGTTTTACTTTCCTCCCACTTCCCACCCGGGACTCTAGTCATATATCATCAATTCAATAACATGGTTTTTAATTGATATACACTCATTAAATTAATGTCTTCAATTTGAAGGGATGGTTATTTGATAACTTCCCCTTGGCCATTTCGTGTTATGTGCAAGGGTTTGGCAAATATTGGGAAGGTGATCTTGAATCTTGATGAAAAGACTTTTATCTAATTTTGGCCTCCATTTAACTTCAATTGTGCATAGTTTCATGACTCCTATTTGATCTCATTGGTAATTTGCTCATTGTAGTAAATTAGTAATAAGCATAGTGGGCAGTCTTCTACTCTACTTCAAACCATGTCACCCAAGAGGCTGGATTCTGTGGTAATGTATTTGCTACTTATCCAGTCGAACTGATTTTGAGTTGTATGACCATAAGCACTGATGGAAAATTATCAGAGAAATGTTTTCTTCTGTGTCACAAAAGTTCATGCTGATTTGTTTTGTCATTAACATATTCCACCATGGCATCATATGTGAAGTCATGCTATTAGTTTATAACCAATCTGGGGAGATTATTTTAGTTCTTTGTATTAGCAGAAGTTGGACTTGAGTTCCTTCAGTAGATGGTGGTTCTGAATAATCGACAGTAAACTTGATGATAAATTCAATTCTGATTTCGAATTGTCAATATGCTCTTCATGGTTAGTTTCTAATTGTAGTATATTGAGAAGATGATTTTTATGAAGTCACCTCTTTGATTCGTAAAAACTTCCATGGAGTTTATAGAACAGATGTACTCTCTTCCATAGCATTTGATAGCCATCAGATGATCAGAAAATACTGTCTGGTTCGATTTAACATCTATGGCATGTCTACTTTTTTGCACCTTGTAATTTGTAAATCAATGAGTTTACCTCATGAAAGATCTTAGTTTACTTTCCTGATTTCCTTTGAAGTTCTGTTGGTTTGTATATGTGAGTCTCTGACAGTTTGTCCATGTATATTGGTGCATTCACATTTTCCATAGCTTCAGGAAAAAGTATCTCTAACTTAAATTAACACATGATTAAAGCGGAGGACCTTTGTGCGTGTATACGTAGGGAGTTCTGTACTCTGTTCTAAAGACTTTAGCTAAAAGCTGACACTTGATTTCTCTCCTCGAACACCCAAAAAGACTGTTTGTCTGTGCTGTGGGCCTCTGGTTTGGAGAGAGAGGAGGGCACTGAAAAGAATAACCCAAAGAATCTAAGAGCAAGTTGTGAAAGGTTTACAGATGATTAAAAGCTTGTATCTCTAGTTAAGTCTTAGCTCACAAGGGGTCATGCATTTCTAAGTAACTGAACAACCTTAAATTTGCTTTTGTTGACTAACTTACCAAAATTTCTTTATGAGATATGCCTGAGAGTCAAAGGATGTTGAATATCTCTTTGACATACTGTGTAATCAAGTACATTGTTTTGGATATGTAGACTGGTCATTTATTGCATCTGTACGAAATTGGATGCTAGGATATTTCTGTCTATCGTAGATGCTTTCTTCTATTCCTCTTGGATATATCGCAATTAGAACTGTGCACACAGACCTCCTGGCTAAGAACCTCTGTAAGATACAATATATACTAGTGCGTAACTTATTGTGGGTGCCAAGAATCGACAGGATTAACAAATTAGTGCTTAGTATCAGTTCTTTTTGACATCGTAGAGGGTTCCTTCTGTGGATATGGATCATGTATCTTTCTGTTCTTGGAATGTTTACCCCTTTAACTAACAAGTCTCATTTCTGTTTTTGGCCGTCGAAATTTATGAACTATTTGTACATTCAGAACTTTTTCATTCTACCCTTACTTTCCCTTGACTTAGAATTCCAAGGAAAACCATCTTGTATATGTTTGAGACATTAAATTTTAAATAGTGAAAAATAGTTACGGAGGACTGGGACAGGGAAAATGTTGTACAATAGTGGCTAATATCGTATTGTTGTGTGGCAGAGTTGCACAAATTCAGTGGACTGGACGGGGAAGGTAGAGACTCCCCTATGCCGGCAGAAACAAAGCCAAGTGGTATGACAACAAAAACAGATACATTAACATCTCCAAACTTATTAACCCTCCCTCGTCAGGAGTATCACCATGTTGGAATTCCTTCACAGAGGTCGTCAAGTGTGCCTCAGGCGGTTGGGCAGAGAGCTGCCCATAAATGGAAGGGACCTGACAAGATTAGCAGGATATACGGTGATTGGATTGACGACATTGAATAATAACTTTACTATTATATATCTCCATCAAGGTTCCCATTTAAGTTTATGCTTATAGATAGAGGGGGGTTATTATGAATCTGTTCTGTAGAAGTATGTATTTTGTGTAATGAGCTTGTTCTAAATATGTCAGACTCTGATGTTCAAAACCCAAGGCTGAAACTTTCTATGTCATGTGTTTTCTCTAATAAACTGTATCAATCTTGTACTTCACTAGTTATCGTTGTTCTTAACTTAGTGCAGAGCAGTGCAGTGTTAAAGAAGATCGGGAGATTTTTCTCGAATTTCATACTTTTGTAGAACCATGTTAACCAGCT

mRNA sequence

AGATTACTTCATATCACATGGGATTTGTTGTAGTAATAATTTTTTGGTAAAACTCAGTCAAACCGTACAGAATTAGAACCAAAAAAAAAAAATCTAGTGCTATATTATCCGCCATCTTCTGATTCTTCTCTGCTCCTCTTCATCACTACAACTCTACAAGTCTACAACAAACAAATCCCATACACCATTGTTGATCATGGATTCCTGGTAATCTCACTTTCTCTGTAAGTTTCCCACAAGTTCTCTGTAACTTAAGATTCTCTAATATCTCCTCGATTTTCGCAAACTCCCAATTTTGAAGTTTAAGTTGAAATTTTCTCAACTGTAATTTCTGGGTTTTCATTTTGCTGCTGGTGACTGGTGACTGGTGGGCTCTTCTGCATTCAATTCATCTTTTTTTTATCTGATTTAGTTTAATTTAAGGTGGTGTACGAAATTCCCCAAAAATCTTAGCTTTAATTTTGCTCAATTTTGATGTTGACGAAAAATTAGGGCTTTTGGGTTTCGTCTTCGCAATTGGGGTTTAGAGAATTAGGTTTTCTATCTAGGGGATTGATTTTTGCACTTTTGGGATGGATTTTGGAACTGAATCAGGGTTTTCGGAAATGGGTGGAGCATTTGACAATTGGGGTGGTGTTGGTCCAAATGATCAGGCAATTTGGGCAACTGAAGATGAGTATAGAAATTGGAATAATAGTGAAACAACCAGTTACCACCTACCTCCACTGCTCCGTATGGGATCAGGTGGCGGAGCTGAGCCTCCCAATAAAAAGACTAGGAGCTCCTCCCAGAGTGGCGGCGATGCTGCGGCGAGCCGCTCAAAAGCAATTGGGAAGATGTTTTACAAGACTAAGTTATGCTGTAAGTTTCGTGCCGGGGTTTGCCCTTATGTCACTAACTGTAATTTTGCTCATGGCCTGGAAGAGCTCCGGAAACCGCCACCAAACTGGCAAGAGATTGTGGCGGCGCACGAGGAGGAGAGGGGTGTTACCGTCGAACAAAGAGAGGAGCACCAGATACCTACAATTAGCACCTCTGAATTGAGGAATGAATCTCCTAGGACCTATAAAGGGAGGCATTGTAAGAAGTTTTACACTGAAGAGGGTTGCCCTTATGGAGAAAATTGCACCTTTCTTCATGATGAACAATCTAGAGCTAGAGAGAGTGTGGCAATAAGTGTGAATCCCACCGTTGGCGGCGGCACCGCTTATGGTGCTAATGGTCCTACTCAGAAGCCTTCGAATTGGAAGACCAGGATTTGTAACAAGTGGGAGACTACTGGTAGCTGCCCATTTGGGAGCAAGTGCCATTTTGCCCATGGATTAGCAGAGTTGCACAAATTCAGTGGACTGGACGGGGAAGGTAGAGACTCCCCTATGCCGGCAGAAACAAAGCCAAGTGGTATGACAACAAAAACAGATACATTAACATCTCCAAACTTATTAACCCTCCCTCGTCAGGAGTATCACCATGTTGGAATTCCTTCACAGAGGTCGTCAAGTGTGCCTCAGGCGGTTGGGCAGAGAGCTGCCCATAAATGGAAGGGACCTGACAAGATTAGCAGGATATACGGTGATTGGATTGACGACATTGAATAATAACTTTACTATTATATATCTCCATCAAGGTTCCCATTTAAGTTTATGCTTATAGATAGAGGGGGGTTATTATGAATCTGTTCTGTAGAAGTATGTATTTTGTGTAATGAGCTTGTTCTAAATATGTCAGACTCTGATGTTCAAAACCCAAGGCTGAAACTTTCTATGTCATGTGTTTTCTCTAATAAACTGTATCAATCTTGTACTTCACTAGTTATCGTTGTTCTTAACTTAGTGCAGAGCAGTGCAGTGTTAAAGAAGATCGGGAGATTTTTCTCGAATTTCATACTTTTGTAGAACCATGTTAACCAGCT

Coding sequence (CDS)

ATGGATTTTGGAACTGAATCAGGGTTTTCGGAAATGGGTGGAGCATTTGACAATTGGGGTGGTGTTGGTCCAAATGATCAGGCAATTTGGGCAACTGAAGATGAGTATAGAAATTGGAATAATAGTGAAACAACCAGTTACCACCTACCTCCACTGCTCCGTATGGGATCAGGTGGCGGAGCTGAGCCTCCCAATAAAAAGACTAGGAGCTCCTCCCAGAGTGGCGGCGATGCTGCGGCGAGCCGCTCAAAAGCAATTGGGAAGATGTTTTACAAGACTAAGTTATGCTGTAAGTTTCGTGCCGGGGTTTGCCCTTATGTCACTAACTGTAATTTTGCTCATGGCCTGGAAGAGCTCCGGAAACCGCCACCAAACTGGCAAGAGATTGTGGCGGCGCACGAGGAGGAGAGGGGTGTTACCGTCGAACAAAGAGAGGAGCACCAGATACCTACAATTAGCACCTCTGAATTGAGGAATGAATCTCCTAGGACCTATAAAGGGAGGCATTGTAAGAAGTTTTACACTGAAGAGGGTTGCCCTTATGGAGAAAATTGCACCTTTCTTCATGATGAACAATCTAGAGCTAGAGAGAGTGTGGCAATAAGTGTGAATCCCACCGTTGGCGGCGGCACCGCTTATGGTGCTAATGGTCCTACTCAGAAGCCTTCGAATTGGAAGACCAGGATTTGTAACAAGTGGGAGACTACTGGTAGCTGCCCATTTGGGAGCAAGTGCCATTTTGCCCATGGATTAGCAGAGTTGCACAAATTCAGTGGACTGGACGGGGAAGGTAGAGACTCCCCTATGCCGGCAGAAACAAAGCCAAGTGGTATGACAACAAAAACAGATACATTAACATCTCCAAACTTATTAACCCTCCCTCGTCAGGAGTATCACCATGTTGGAATTCCTTCACAGAGGTCGTCAAGTGTGCCTCAGGCGGTTGGGCAGAGAGCTGCCCATAAATGGAAGGGACCTGACAAGATTAGCAGGATATACGGTGATTGGATTGACGACATTGAATAA

Protein sequence

MDFGTESGFSEMGGAFDNWGGVGPNDQAIWATEDEYRNWNNSETTSYHLPPLLRMGSGGGAEPPNKKTRSSSQSGGDAAASRSKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERGVTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFSGLDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDIE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo05119Spo05119gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo05119.1Spo05119.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05119.1.exon.1Spo05119.1.exon.1exon
Spo05119.1.exon.2Spo05119.1.exon.2exon
Spo05119.1.exon.3Spo05119.1.exon.3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05119.1.utr5p.1Spo05119.1.utr5p.1five_prime_UTR
Spo05119.1.utr5p.2Spo05119.1.utr5p.2five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05119.1.CDS.1Spo05119.1.CDS.1CDS
Spo05119.1.CDS.2Spo05119.1.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05119.1.utr3p.1Spo05119.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo05119.1 vs. NCBI nr
Match: gi|731320947|ref|XP_010671084.1| (PREDICTED: zinc finger CCCH domain-containing protein 56-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 553.1 bits (1424), Expect = 3.300e-154
Identity = 275/351 (78.35%), Postives = 297/351 (84.62%), Query Frame = 1 

		  

Query: 1   MDFGTESGFS----EMGGAFDNWGGVGPNDQAIWATEDEYRNWNNSETTSYHLPP--LLR 60
           M+FG E+GF     +MGGAFD WGG G NDQAIWATEDEYRNWN SET S +  P  LLR
Sbjct: 1   MEFGAEAGFPGGVPDMGGAFDLWGGGGLNDQAIWATEDEYRNWNGSETPSGNFSPHPLLR 60

Query: 61  MGSGGGAEPPNKKTRSSSQSGGDAAASRSKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAH 120
            GSG G EPPNKK RSS    GD+  SRSKAIG+MFYKTKLCCKFRAGVCPY+TNCNFAH
Sbjct: 61  SGSGAGGEPPNKKNRSSQS--GDSGGSRSKAIGRMFYKTKLCCKFRAGVCPYITNCNFAH 120

Query: 121 GLEELRKPPPNWQEIVAAHEEERGVTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFY 180
           GLEELRKPPPNWQ+IVAAHEEERGVTVEQREEHQIPTIST++ R ES R+YKGRHCKKFY
Sbjct: 121 GLEELRKPPPNWQDIVAAHEEERGVTVEQREEHQIPTISTTDSRVESQRSYKGRHCKKFY 180

Query: 181 TEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWE 240
           TEEGCPYG+NCTFLHDEQSR+RESVAISV+PTVGG  A+GANGP QKPSNWKTRICNKWE
Sbjct: 181 TEEGCPYGDNCTFLHDEQSRSRESVAISVSPTVGG--AFGANGPIQKPSNWKTRICNKWE 240

Query: 241 TTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLT 300
           TTGSCPFGSKCHFAHGLAELHKF G  ++GE RDS +P ETK SGM TK DT  + +L T
Sbjct: 241 TTGSCPFGSKCHFAHGLAELHKFGGGLMEGEVRDSSLPPETKASGMATKPDTSATQSLST 300

Query: 301 LPRQEYHHV--GIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDIE 342
            PRQE+HHV  GIPSQRSS+V Q  G R A KWKGPDKISRIYGDWIDDIE
Sbjct: 301 -PRQEFHHVGLGIPSQRSSNVTQGAGPRPAQKWKGPDKISRIYGDWIDDIE 346
[Close]
BLAST of Spo05119.1 vs. NCBI nr
Match: gi|902202848|gb|KNA14384.1| (hypothetical protein SOVF_107930 [Spinacia oleracea])

HSP 1 Score: 551.6 bits (1420), Expect = 9.700e-154
Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 1 

		  

Query: 79  AASRSKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERG 138
           AA   +AIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERG
Sbjct: 51  AAMLRRAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERG 110

Query: 139 VTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQSRARES 198
           VTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQSRARES
Sbjct: 111 VTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQSRARES 170

Query: 199 VAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFS 258
           VAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFS
Sbjct: 171 VAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFS 230

Query: 259 GLDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQR 318
           GLDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQR
Sbjct: 231 GLDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQR 290

Query: 319 AAHKWKGPDKISRIYGDWIDDIE 342
           AAHKWKGPDKISRIYGDWIDDIE
Sbjct: 291 AAHKWKGPDKISRIYGDWIDDIE 313
[Close]
BLAST of Spo05119.1 vs. NCBI nr
Match: gi|698536913|ref|XP_009764664.1| (PREDICTED: zinc finger CCCH domain-containing protein 56-like [Nicotiana sylvestris])

HSP 1 Score: 424.1 bits (1089), Expect = 2.300e-115
Identity = 221/361 (61.22%), Postives = 257/361 (71.19%), Query Frame = 1 

		  

Query: 1   MDFGTESGFS---------EMGGAFDNWGGVGPNDQAIWATEDEYRNWN---NSETTSYH 60
           MDF  E+ F+           G  FDNWG  G +DQA+WATED+YR+WN   +SET S  
Sbjct: 1   MDFMGEASFAGGNMIPDSTSNGSGFDNWGP-GFSDQAVWATEDDYRDWNTGPSSETPS-- 60

Query: 61  LPPLLRMGSGGGAEPPNKKTRSSSQSGGDAAASRSKAIGKMFYKTKLCCKFRAGVCPYVT 120
                   +  G+EPP+KK+RSS Q       SRSKAIGKMF+KTKLCCKFRAGVCPY+ 
Sbjct: 61  ------SSNRSGSEPPHKKSRSS-QGADSHVTSRSKAIGKMFFKTKLCCKFRAGVCPYIN 120

Query: 121 NCNFAHGLEELRKPPPNWQEIVAAHEEERG---VTVEQREEHQIPTISTSELRNESPRTY 180
           NCNFAHG+EELRKPPPNWQEIVA HE E G   V +E REEHQIPT+S+ ELR E+ R++
Sbjct: 121 NCNFAHGIEELRKPPPNWQEIVAEHESEHGGGGVMLESREEHQIPTVSSPELRIETQRSF 180

Query: 181 KGRHCKKFYTEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGANGPTQKPSNW 240
           KGRHCKKFYTEEGCPYG+ CTFLHDEQSRARESVAISV PTV GG    A G   KPSNW
Sbjct: 181 KGRHCKKFYTEEGCPYGDTCTFLHDEQSRARESVAISVTPTV-GGFGNNAAGANLKPSNW 240

Query: 241 KTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRDS-PMPAETKPSGMTTKT 300
           KTRICNKWETTG CPFGSKCHFAHG AELHK+ G  ++ EG+D    P + +  G + KT
Sbjct: 241 KTRICNKWETTGYCPFGSKCHFAHGAAELHKYGGGLMEMEGKDPLSTPPDLRQGGGSLKT 300

Query: 301 DTLTSPNLLTLPRQEYHHV--GIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDI 342
              T P+ ++ P  + +H+  G+  QR S V Q  G R   KWKGPDKIS+IYGDWIDDI
Sbjct: 301 TESTVPSTISAPHTDVYHLGPGVQVQRPSGVVQGAGHRVIQKWKGPDKISKIYGDWIDDI 350
[Close]
BLAST of Spo05119.1 vs. NCBI nr
Match: gi|720076951|ref|XP_010240878.1| (PREDICTED: zinc finger CCCH domain-containing protein 56 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 423.3 bits (1087), Expect = 4.000e-115
Identity = 221/369 (59.89%), Postives = 270/369 (73.17%), Query Frame = 1 

		  

Query: 1   MDFGTESGFS--EMG---------GAFDNWGGVGPNDQAIWATEDEYRNWN---NSETTS 60
           MD+G E+GFS   +G         G  DNW   G NDQAIWATED+Y  WN   +++T S
Sbjct: 1   MDYGGEAGFSGGNVGQIIPEIPGSGGVDNWIP-GLNDQAIWATEDDYGVWNGDASADTPS 60

Query: 61  YHLPPLLRMGSGGGAEPPNKKTRSS----SQSGGDA------AASRSKAIGKMFYKTKLC 120
                  +  +  G+EPPNKK+R+S    SQ  G +      +++RSKAIGKMF+KTKLC
Sbjct: 61  NSNYDGRQSQTRSGSEPPNKKSRNSQVGDSQGSGFSRDRDLPSSNRSKAIGKMFFKTKLC 120

Query: 121 CKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERGVTVEQREEHQIPTISTSE 180
           CKFRAG CPY+TNCNFAHG+EELRKPPPNWQEIVAA +E+RGV+ E REEHQIP++S+S 
Sbjct: 121 CKFRAGTCPYITNCNFAHGIEELRKPPPNWQEIVAAQDEDRGVSSEPREEHQIPSLSSSG 180

Query: 181 LRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGAN 240
           L  E+ R+YKGRHCKKFYT+EGCPYG+NCTFLHDEQS+ARESVAIS+ PT+G G     N
Sbjct: 181 LGGETQRSYKGRHCKKFYTDEGCPYGDNCTFLHDEQSKARESVAISLGPTIGSGYGNSGN 240

Query: 241 GPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRD-SPMPAET 300
           GP QKPSNWKTRICNKWE TG CPFGSKCHFAHGL ELH++ G  ++ EGRD S  P ++
Sbjct: 241 GPNQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVEVEGRDSSSAPPDS 300

Query: 301 KPSGMTTKTDTLT-SPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQRAAHKWKGPDKISRI 342
           K   + +KT T T   ++ ++P  +  ++GIP QR+S + Q  GQR   KWKGPDKISRI
Sbjct: 301 KQVAVASKTQTDTVVASMASVPHSDV-YMGIPPQRTSVLNQRPGQRPLQKWKGPDKISRI 360
[Close]
BLAST of Spo05119.1 vs. NCBI nr
Match: gi|1009157792|ref|XP_015896943.1| (PREDICTED: zinc finger CCCH domain-containing protein 12 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 422.5 bits (1085), Expect = 6.800e-115
Identity = 212/357 (59.38%), Postives = 262/357 (73.39%), Query Frame = 1 

		  

Query: 1   MDFGTESGFSE-------MGGAFDNWGGVGPNDQAIWATEDEYRNWNNSETT----SYHL 60
           M++G + GFS         G   +NWGG    DQ +WATED+YR WNN + +    S   
Sbjct: 1   MEYGRDGGFSSGNVVQIMTGSGGENWGG---GDQVVWATEDDYRVWNNGDASGDAFSNSS 60

Query: 61  PPLLRMGSGGGAEPPNKKTRSSSQSGGDAAASRSKAIGKMFYKTKLCCKFRAGVCPYVTN 120
               +  +  G+EPPNKK+++S       +++RSKAIGKMF+KTKLCCKFRAG CPY+TN
Sbjct: 61  YEQRQSQTRSGSEPPNKKSKNSQDV---TSSNRSKAIGKMFFKTKLCCKFRAGTCPYITN 120

Query: 121 CNFAHGLEELRKPPPNWQEIVAAHEEERGVTVEQREEHQIPTISTSELRNESPRTYKGRH 180
           CNFAH +EELR+PPPNWQEIVAAHEE++ V+ E REE QIP+I +S    E+ R+YKGRH
Sbjct: 121 CNFAHSIEELRRPPPNWQEIVAAHEEDKAVSSEPREEFQIPSIGSSNFAVETQRSYKGRH 180

Query: 181 CKKFYTEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGANGPT-QKPSNWKTR 240
           CKKFYTEEGCPYG+NCTFLHDEQS+ RESVAIS+ P   GG A  A+G T  KPSNWKTR
Sbjct: 181 CKKFYTEEGCPYGDNCTFLHDEQSKNRESVAISLGPGGYGGAAAAASGGTNNKPSNWKTR 240

Query: 241 ICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRDSPMPAETKPSGMTTKT--DT 300
           ICNKWE TG CPFGSKCHFAHG+AELH++ G  +D E RDS + ++ K  G+ +KT  DT
Sbjct: 241 ICNKWELTGYCPFGSKCHFAHGVAELHRYGGGLVDNEVRDSSVSSDNKQVGVPSKTPADT 300

Query: 301 LTSPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDIE 342
           + S ++ ++P  + +H+G+PSQRSS V Q  GQR   KWKGPDKISRIYGDWIDDIE
Sbjct: 301 VVS-SVPSVPHPDVYHIGVPSQRSSVVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 350
[Close]
BLAST of Spo05119.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXK5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049590 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 2.300e-154
Identity = 275/351 (78.35%), Postives = 297/351 (84.62%), Query Frame = 1 

		  

Query: 1   MDFGTESGFS----EMGGAFDNWGGVGPNDQAIWATEDEYRNWNNSETTSYHLPP--LLR 60
           M+FG E+GF     +MGGAFD WGG G NDQAIWATEDEYRNWN SET S +  P  LLR
Sbjct: 1   MEFGAEAGFPGGVPDMGGAFDLWGGGGLNDQAIWATEDEYRNWNGSETPSGNFSPHPLLR 60

Query: 61  MGSGGGAEPPNKKTRSSSQSGGDAAASRSKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAH 120
            GSG G EPPNKK RSS    GD+  SRSKAIG+MFYKTKLCCKFRAGVCPY+TNCNFAH
Sbjct: 61  SGSGAGGEPPNKKNRSSQS--GDSGGSRSKAIGRMFYKTKLCCKFRAGVCPYITNCNFAH 120

Query: 121 GLEELRKPPPNWQEIVAAHEEERGVTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFY 180
           GLEELRKPPPNWQ+IVAAHEEERGVTVEQREEHQIPTIST++ R ES R+YKGRHCKKFY
Sbjct: 121 GLEELRKPPPNWQDIVAAHEEERGVTVEQREEHQIPTISTTDSRVESQRSYKGRHCKKFY 180

Query: 181 TEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWE 240
           TEEGCPYG+NCTFLHDEQSR+RESVAISV+PTVGG  A+GANGP QKPSNWKTRICNKWE
Sbjct: 181 TEEGCPYGDNCTFLHDEQSRSRESVAISVSPTVGG--AFGANGPIQKPSNWKTRICNKWE 240

Query: 241 TTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLT 300
           TTGSCPFGSKCHFAHGLAELHKF G  ++GE RDS +P ETK SGM TK DT  + +L T
Sbjct: 241 TTGSCPFGSKCHFAHGLAELHKFGGGLMEGEVRDSSLPPETKASGMATKPDTSATQSLST 300

Query: 301 LPRQEYHHV--GIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDIE 342
            PRQE+HHV  GIPSQRSS+V Q  G R A KWKGPDKISRIYGDWIDDIE
Sbjct: 301 -PRQEFHHVGLGIPSQRSSNVTQGAGPRPAQKWKGPDKISRIYGDWIDDIE 346
[Close]
BLAST of Spo05119.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R614_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_107930 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 6.700e-154
Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 1 

		  

Query: 79  AASRSKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERG 138
           AA   +AIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERG
Sbjct: 51  AAMLRRAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERG 110

Query: 139 VTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQSRARES 198
           VTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQSRARES
Sbjct: 111 VTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQSRARES 170

Query: 199 VAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFS 258
           VAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFS
Sbjct: 171 VAISVNPTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFS 230

Query: 259 GLDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQR 318
           GLDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQR
Sbjct: 231 GLDGEGRDSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSSVPQAVGQR 290

Query: 319 AAHKWKGPDKISRIYGDWIDDIE 342
           AAHKWKGPDKISRIYGDWIDDIE
Sbjct: 291 AAHKWKGPDKISRIYGDWIDDIE 313
[Close]
BLAST of Spo05119.1 vs. UniProtKB/TrEMBL
Match: M1CK60_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026937 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.400e-114
Identity = 219/361 (60.66%), Postives = 257/361 (71.19%), Query Frame = 1 

		  

Query: 1   MDFGTESGFS---------EMGGAFDNWGGVGPN--DQAIWATEDEYRNWNNS---ETTS 60
           MDF  E+GF+           GG +D+WG   PN  DQA+WATED+Y+ WN     ET S
Sbjct: 1   MDFTGEAGFAGGNVIPDSTAGGGGYDSWG---PNFSDQAVWATEDDYKAWNTGPFCETPS 60

Query: 61  YHLPPLLRMGSGGGAEPPNKKTRSSSQSGGDA-AASRSKAIGKMFYKTKLCCKFRAGVCP 120
                     +  G+EPPNKK+R+   S       S SKAIGKMF+KTKLCCKFRAGVCP
Sbjct: 61  NSSQDGRHSQNRSGSEPPNKKSRNVQDSDARIIVTSSSKAIGKMFFKTKLCCKFRAGVCP 120

Query: 121 YVTNCNFAHGLEELRKPPPNWQEIVAAHEEERGVTVEQREEHQIPTISTSELRNESPRTY 180
           YVTNCNFAHG+EELRKPPPNWQEIVAAHE ERGV VE REEHQIP +S+ +LR ES R+ 
Sbjct: 121 YVTNCNFAHGIEELRKPPPNWQEIVAAHENERGVMVELREEHQIPILSSPDLRGESQRSA 180

Query: 181 KGRHCKKFYTEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGANGPTQKPSNW 240
           KGRHCKKFYTEEGCPYG++CTFLHDEQSR+RESVAISV PTV GG    A G TQKPSNW
Sbjct: 181 KGRHCKKFYTEEGCPYGDSCTFLHDEQSRSRESVAISVTPTV-GGFGNNATGATQKPSNW 240

Query: 241 KTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRD-SPMPAETKPSGMTTKT 300
           KTRICNKWETTG CPFGSKCHFAHG+AEL+KF G   + +G+D   +P E K  G+ ++ 
Sbjct: 241 KTRICNKWETTGYCPFGSKCHFAHGVAELNKFGGGPAETDGKDYVSVPPELKQGGVPSRA 300

Query: 301 DTLTSPNLLTLPRQEYHHV--GIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDI 342
              T P+ +     + +H+  G+  QR + +    GQR   KWKGPDKIS+IYGDWIDDI
Sbjct: 301 TESTVPSTIPALHTDVYHLGQGVQVQRPTGIADRPGQRFFKKWKGPDKISKIYGDWIDDI 357
[Close]
BLAST of Spo05119.1 vs. UniProtKB/TrEMBL
Match: A0A0V0IL16_SOLCH (Putative zinc finger CCCH domain-containing protein 56-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 3.100e-114
Identity = 219/361 (60.66%), Postives = 256/361 (70.91%), Query Frame = 1 

		  

Query: 1   MDFGTESGFS---------EMGGAFDNWGGVGPN--DQAIWATEDEYRNWNNS---ETTS 60
           MDF  E+GF+           GG +D+WG   PN  DQA+WATED+Y+ WN     ET S
Sbjct: 1   MDFTGEAGFAGGNVIPDSTAGGGGYDSWG---PNYSDQAVWATEDDYKAWNTGPFCETPS 60

Query: 61  YHLPPLLRMGSGGGAEPPNKKTRSSSQSGGDA-AASRSKAIGKMFYKTKLCCKFRAGVCP 120
                     +  G+EPPNKK+R+   S       S SKAIGKMF+KTKLCCKFRAGVCP
Sbjct: 61  NSSQDGRHSQNRSGSEPPNKKSRNVQDSDARIIVTSSSKAIGKMFFKTKLCCKFRAGVCP 120

Query: 121 YVTNCNFAHGLEELRKPPPNWQEIVAAHEEERGVTVEQREEHQIPTISTSELRNESPRTY 180
           YVTNCNFAHG+EELRKPPPNWQEIVAAHE ERGV VE REEHQIP +S+ +LR ES R+ 
Sbjct: 121 YVTNCNFAHGIEELRKPPPNWQEIVAAHENERGVMVELREEHQIPILSSPDLRGESQRSA 180

Query: 181 KGRHCKKFYTEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGANGPTQKPSNW 240
           KGRHCKKFYTEEGCPYG++CTFLHDEQSR+RESVAISV PTV GG    A G TQKPSNW
Sbjct: 181 KGRHCKKFYTEEGCPYGDSCTFLHDEQSRSRESVAISVTPTV-GGFGNNATGATQKPSNW 240

Query: 241 KTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRD-SPMPAETKPSGMTTKT 300
           KTRICNKWETTG CPFGSKCHFAHG+AEL+KF G   + +G+D   +P E K  G+ ++ 
Sbjct: 241 KTRICNKWETTGYCPFGSKCHFAHGVAELNKFGGGPAETDGKDYVSVPPELKQGGVPSRA 300

Query: 301 DTLTSPNLLTLPRQEYHHV--GIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDI 342
              T P+       + +H+  G+  QR + +    GQR   KWKGPDKIS+IYGDWIDDI
Sbjct: 301 TESTVPSTTPALHTDVYHLGQGVQVQRPTGIADRPGQRFFKKWKGPDKISKIYGDWIDDI 357
[Close]
BLAST of Spo05119.1 vs. UniProtKB/TrEMBL
Match: K4C8Z2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 4.000e-114
Identity = 220/361 (60.94%), Postives = 258/361 (71.47%), Query Frame = 1 

		  

Query: 1   MDFGTESGF--------SEMG-GAFDNWGGVGPN--DQAIWATEDEYRNWNNS---ETTS 60
           MDF  E+GF        S  G G +D+WG   PN  DQA+WATED+Y+ WN+    ET S
Sbjct: 1   MDFTGEAGFAGGNVIPDSTAGVGGYDSWG---PNFSDQAVWATEDDYKAWNSGPYCETPS 60

Query: 61  YHLPPLLRMGSGGGAEPPNKKTRSSSQSGGDA-AASRSKAIGKMFYKTKLCCKFRAGVCP 120
                     +  G+EPPNKK+R+   S       S SKAIGKMF+KTKLCCKFRAGVCP
Sbjct: 61  NSSQDGRHSQNRSGSEPPNKKSRNVQDSDARIIVTSSSKAIGKMFFKTKLCCKFRAGVCP 120

Query: 121 YVTNCNFAHGLEELRKPPPNWQEIVAAHEEERGVTVEQREEHQIPTISTSELRNESPRTY 180
           YVTNCNFAHG+EELRKPPPNWQEIVAAHE ERGV VE REEHQIP +S+ +LR ES R+ 
Sbjct: 121 YVTNCNFAHGIEELRKPPPNWQEIVAAHENERGVMVELREEHQIPILSSPDLRGESQRSA 180

Query: 181 KGRHCKKFYTEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGANGPTQKPSNW 240
           KGRHCKKFYTEEGCPYG++CTFLHDEQSR+RESVAISV PTV GG    A G TQKPSNW
Sbjct: 181 KGRHCKKFYTEEGCPYGDSCTFLHDEQSRSRESVAISVTPTV-GGFGNNATGATQKPSNW 240

Query: 241 KTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRD-SPMPAETKPSGMTTKT 300
           KTRICNKWETTG CPFGSKCHFAHG+AEL+KF G   + +G+D   +P E K  G+ ++ 
Sbjct: 241 KTRICNKWETTGYCPFGSKCHFAHGVAELNKFGGGPAETDGKDYVSVPPELKQGGVPSRA 300

Query: 301 DTLTSPNLLTLPRQEYHHV--GIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDI 342
              T P+ +     + +H+  G+  QR + +    GQR   KWKGPDKIS+IYGDWIDDI
Sbjct: 301 TESTVPSTIPALHTDVYHLGQGVQVQRPTGIADRPGQRFFQKWKGPDKISKIYGDWIDDI 357
[Close]
BLAST of Spo05119.1 vs. ExPASy Swiss-Prot
Match: C3H56_ORYSJ (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN=Os08g0159800 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.000e-99
Identity = 196/367 (53.41%), Postives = 233/367 (63.49%), Query Frame = 1 

		  

Query: 17  DNWGGVGPN--DQAIWATEDEYRNWNNSETTSYHLPPLLRMGSGGGAE-------PPNKK 76
           D W        D  IWATED+Y +  N++            G GGG+        PP KK
Sbjct: 17  DAWANAAAQGGDAGIWATEDDYNSQWNAD------------GGGGGSSRAGSEQPPPGKK 76

Query: 77  TRSSSQSGGDAAASRSKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQ 136
           +R      G    S+S+AIGKMF+KTKLCCKFRAG CPYVTNCNFAHG+EELRKPPPNWQ
Sbjct: 77  SRGGGGGEGGGNTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPNWQ 136

Query: 137 EIVAAHEEERGVTVEQREEHQIPTISTSELR------------NESPRTYKGRHCKKFYT 196
           EIVAAHEE      E REEHQIP +++S                 S R YKGRHCKKFYT
Sbjct: 137 EIVAAHEE----ATEAREEHQIPIMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYT 196

Query: 197 EEGCPYGENCTFLHDEQSRARESVAISVNPTVGGG----------------TAYGANGPT 256
           +EGCPYG+ CTFLHDEQS+ARESVAIS++P+VGGG                +A   NGP 
Sbjct: 197 DEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAASASAAAGNGPM 256

Query: 257 QKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRDSPMPAETKPSG 316
           QKPSNWKTRICNKWE TG CPFGSKCHFAHG AELHK+ G  +D + RD+    ++K + 
Sbjct: 257 QKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRDAAATPDSKQAV 316

Query: 317 MTTKTDTLTSPNLLT-LPRQEYHHVGIPSQRSSSVPQAVG--QRAAHKWKGPDKISRIYG 342
           ++ K    T+    T LP  + +H+G+ +QRS+   Q  G  QR   KWKGPDKISRIYG
Sbjct: 317 VSAKAPAETAAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISRIYG 367
[Close]
BLAST of Spo05119.1 vs. ExPASy Swiss-Prot
Match: C3H12_ARATH (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.000e-94
Identity = 208/379 (54.88%), Postives = 239/379 (63.06%), Query Frame = 1 

		  

Query: 17  DNWGGVGPN--DQAIWATEDEY-RNWN-NSETTSYHLPPLLRMGSGGGAEPPNKKTR--- 76
           DNW    PN  D A+WATED+Y R W  N + TS         G   G  PPNKKTR   
Sbjct: 24  DNWF---PNLGDSAVWATEDDYNRAWAMNPDNTS---------GDNNG--PPNKKTRGSP 83

Query: 77  -SSSQSGGDAAASRSKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQE 136
            SSS +   AA++R+KAIGKMF+KTKLCCKFRAG CPY+TNCNFAH +EELR+PPPNWQE
Sbjct: 84  SSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQE 143

Query: 137 IVAAHEEER---------GVTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGC 196
           IVAAHEEER          V    REE QIP++ +S    ES R++KGRHCKKFYTEEGC
Sbjct: 144 IVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTA--ESGRSFKGRHCKKFYTEEGC 203

Query: 197 PYGENCTFLHDEQSRARESVAISVNP--------------------------TVGGGTAY 256
           PYGE+CTFLHDE SR RESVAIS+ P                           +GGG   
Sbjct: 204 PYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGS 263

Query: 257 GANGPTQ--KPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRDSPM 316
           G+    Q  KPSNWKTRICNKWE TG CPFG+KCHFAHG AELH+F G  ++ EG+D   
Sbjct: 264 GSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVS 323

Query: 317 P-AETK-----PSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQR-SSSVPQAVGQRAAHK 342
           P  +TK     P G+ + T TL SP +       Y H G+  QR SS+V Q  G R   K
Sbjct: 324 PNPDTKQTVQNPKGL-SDTTTLLSPGVPHNADASY-HTGVALQRASSAVTQKPGIRTHQK 383
[Close]
BLAST of Spo05119.1 vs. ExPASy Swiss-Prot
Match: C3H39_ARATH (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.100e-39
Identity = 99/290 (34.14%), Postives = 139/290 (47.93%), Query Frame = 1 

		  

Query: 83  SKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIV----AAHEEERG 142
           +K    +FYKT++C KFRAG C     CNFAHG+E+LR+PP NWQEIV    A  + ER 
Sbjct: 97  NKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERE 156

Query: 143 VTVE-QREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQS---- 202
              E +RE   +  +  +   ++     + + C+KF   E CPYG+ C F+H++ S    
Sbjct: 157 RERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFRE 216

Query: 203 ---RARESVAISVNPTVGGGTAYGA-------------------NGPTQKPSNWKTRICN 262
              + RES  ISV  T     +  A                   NG   K   WKTR+C 
Sbjct: 217 DSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCM 276

Query: 263 KWETTGSCPFGSKCHFAHGLAELHKFSG-LDGEGRDSPMPAETKPSGMTTKTDTLTSPNL 322
           K++ TG CPFG KCHFAHG AELH   G ++GE  ++   A      +    +      +
Sbjct: 277 KFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAMNA--VASVNKQAVVPANEAFAMKPI 336

Query: 323 LTLPRQEYHHVGIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDI 341
                       + +  S    +   ++   KW    KI+RIYGDWIDD+
Sbjct: 337 ----------TQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDL 374
[Close]
BLAST of Spo05119.1 vs. ExPASy Swiss-Prot
Match: C3H28_ARATH (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g35430 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.600e-31
Identity = 86/202 (42.57%), Postives = 103/202 (50.99%), Query Frame = 1 

		  

Query: 165 YKGRHCKKFYTEEGCPYG-ENCTFLHD-------------------EQSRARESVAISVN 224
           +K + C KF     CPY   +C F H                    E SR RES A+S+ 
Sbjct: 72  FKTKLCFKFRAGT-CPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLG 131

Query: 225 PTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDG 284
           P        G    T K  NWKTRICNKW+TTG CPFGS CHFAHG +ELH F G  ++G
Sbjct: 132 PR-------GNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEG 191

Query: 285 EGR-DSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSS--VPQAVGQRA 342
           E +  +    +TK  G      +L SP             G+ SQR+SS    +  G R 
Sbjct: 192 ECKIGTSATLDTKQRGQVDTVTSLVSP-------------GVSSQRTSSAVTQKPNGVRT 251
[Close]
BLAST of Spo05119.1 vs. ExPASy Swiss-Prot
Match: C3H44_ORYSJ (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.200e-12
Identity = 47/122 (38.52%), Postives = 61/122 (50.00%), Query Frame = 1 

		  

Query: 166 KGRHCKKFYTEEGCPYGENCTFLHDEQSRARESVAISVNPTVGGGTAYGA---------- 225
           K + C KF++  GCP+G +C FLH+     + +  +    T  GGTA  A          
Sbjct: 34  KLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKM----TSHGGTAVAAPPGRMPLGPG 93

Query: 226 --NGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFSGLDGEGRDSPMPAET 276
             NGP    S+ KTR+CNK+ T   C +GSKCHFAHG  EL K   LD      P P  +
Sbjct: 94  APNGPPT--SSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPMLLD---NSMPHPMGS 146
[Close]
BLAST of Spo05119.1 vs. TAIR (Arabidopsis)
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein)

HSP 1 Score: 346.7 bits (888), Expect = 1.700e-95
Identity = 208/379 (54.88%), Postives = 239/379 (63.06%), Query Frame = 1 

		  

Query: 17  DNWGGVGPN--DQAIWATEDEY-RNWN-NSETTSYHLPPLLRMGSGGGAEPPNKKTR--- 76
           DNW    PN  D A+WATED+Y R W  N + TS         G   G  PPNKKTR   
Sbjct: 24  DNWF---PNLGDSAVWATEDDYNRAWAMNPDNTS---------GDNNG--PPNKKTRGSP 83

Query: 77  -SSSQSGGDAAASRSKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQE 136
            SSS +   AA++R+KAIGKMF+KTKLCCKFRAG CPY+TNCNFAH +EELR+PPPNWQE
Sbjct: 84  SSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQE 143

Query: 137 IVAAHEEER---------GVTVEQREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGC 196
           IVAAHEEER          V    REE QIP++ +S    ES R++KGRHCKKFYTEEGC
Sbjct: 144 IVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTA--ESGRSFKGRHCKKFYTEEGC 203

Query: 197 PYGENCTFLHDEQSRARESVAISVNP--------------------------TVGGGTAY 256
           PYGE+CTFLHDE SR RESVAIS+ P                           +GGG   
Sbjct: 204 PYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGS 263

Query: 257 GANGPTQ--KPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDGEGRDSPM 316
           G+    Q  KPSNWKTRICNKWE TG CPFG+KCHFAHG AELH+F G  ++ EG+D   
Sbjct: 264 GSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVS 323

Query: 317 P-AETK-----PSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQR-SSSVPQAVGQRAAHK 342
           P  +TK     P G+ + T TL SP +       Y H G+  QR SS+V Q  G R   K
Sbjct: 324 PNPDTKQTVQNPKGL-SDTTTLLSPGVPHNADASY-HTGVALQRASSAVTQKPGIRTHQK 383
[Close]
BLAST of Spo05119.1 vs. TAIR (Arabidopsis)
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein)

HSP 1 Score: 162.9 bits (411), Expect = 3.400e-40
Identity = 99/290 (34.14%), Postives = 139/290 (47.93%), Query Frame = 1 

		  

Query: 83  SKAIGKMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIV----AAHEEERG 142
           +K    +FYKT++C KFRAG C     CNFAHG+E+LR+PP NWQEIV    A  + ER 
Sbjct: 97  NKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERE 156

Query: 143 VTVE-QREEHQIPTISTSELRNESPRTYKGRHCKKFYTEEGCPYGENCTFLHDEQS---- 202
              E +RE   +  +  +   ++     + + C+KF   E CPYG+ C F+H++ S    
Sbjct: 157 RERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFRE 216

Query: 203 ---RARESVAISVNPTVGGGTAYGA-------------------NGPTQKPSNWKTRICN 262
              + RES  ISV  T     +  A                   NG   K   WKTR+C 
Sbjct: 217 DSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCM 276

Query: 263 KWETTGSCPFGSKCHFAHGLAELHKFSG-LDGEGRDSPMPAETKPSGMTTKTDTLTSPNL 322
           K++ TG CPFG KCHFAHG AELH   G ++GE  ++   A      +    +      +
Sbjct: 277 KFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAMNA--VASVNKQAVVPANEAFAMKPI 336

Query: 323 LTLPRQEYHHVGIPSQRSSSVPQAVGQRAAHKWKGPDKISRIYGDWIDDI 341
                       + +  S    +   ++   KW    KI+RIYGDWIDD+
Sbjct: 337 ----------TQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDL 374
[Close]
BLAST of Spo05119.1 vs. TAIR (Arabidopsis)
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 136.7 bits (343), Expect = 2.600e-32
Identity = 86/202 (42.57%), Postives = 103/202 (50.99%), Query Frame = 1 

		  

Query: 165 YKGRHCKKFYTEEGCPYG-ENCTFLHD-------------------EQSRARESVAISVN 224
           +K + C KF     CPY   +C F H                    E SR RES A+S+ 
Sbjct: 72  FKTKLCFKFRAGT-CPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLG 131

Query: 225 PTVGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKFSG--LDG 284
           P        G    T K  NWKTRICNKW+TTG CPFGS CHFAHG +ELH F G  ++G
Sbjct: 132 PR-------GNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEG 191

Query: 285 EGR-DSPMPAETKPSGMTTKTDTLTSPNLLTLPRQEYHHVGIPSQRSSS--VPQAVGQRA 342
           E +  +    +TK  G      +L SP             G+ SQR+SS    +  G R 
Sbjct: 192 ECKIGTSATLDTKQRGQVDTVTSLVSP-------------GVSSQRTSSAVTQKPNGVRT 251
[Close]
BLAST of Spo05119.1 vs. TAIR (Arabidopsis)
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 56.6 bits (135), Expect = 3.400e-8
Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 1 

		  

Query: 207 VGGGTAYGANGPTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHK 257
           +GGG   G+ G     SN+KT+IC ++ + G+C FG +CHFAHG AEL K
Sbjct: 196 LGGGGGMGSEGKPHPGSNFKTKICERF-SKGNCTFGDRCHFAHGEAELRK 244
[Close]
BLAST of Spo05119.1 vs. TAIR (Arabidopsis)
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 52.8 bits (125), Expect = 5.000e-7
Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 1 

		  

Query: 226 KTRICNKWETTGSCPFGSKCHFAHGLAEL 255
           KT +CNKW+ TG+CP+G  C FAHG+ EL
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKEL 252
The following BLAST results are available for this feature:
BLAST of Spo05119.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731320947|ref|XP_010671084.1|3.3e-15478.3PREDICTED: zinc finger CCCH do... [more]
gi|902202848|gb|KNA14384.1|9.7e-15498.4hypothetical protein SOVF_1079... [more]
gi|698536913|ref|XP_009764664.1|2.3e-11561.2PREDICTED: zinc finger CCCH do... [more]
gi|720076951|ref|XP_010240878.1|4.0e-11559.8PREDICTED: zinc finger CCCH do... [more]
gi|1009157792|ref|XP_015896943.1|6.8e-11559.3PREDICTED: zinc finger CCCH do... [more]
back to top
BLAST of Spo05119.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8CXK5_BETVU2.3e-15478.3Uncharacterized protein OS=Bet... [more]
A0A0K9R614_SPIOL6.7e-15498.4Uncharacterized protein OS=Spi... [more]
M1CK60_SOLTU1.4e-11460.6Uncharacterized protein OS=Sol... [more]
A0A0V0IL16_SOLCH3.1e-11460.6Putative zinc finger CCCH doma... [more]
K4C8Z2_SOLLC4.0e-11460.9Uncharacterized protein OS=Sol... [more]
back to top
BLAST of Spo05119.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
C3H56_ORYSJ1.0e-9953.4Zinc finger CCCH domain-contai... [more]
C3H12_ARATH3.0e-9454.8Zinc finger CCCH domain-contai... [more]
C3H39_ARATH6.1e-3934.1Zinc finger CCCH domain-contai... [more]
C3H28_ARATH4.6e-3142.5Zinc finger CCCH domain-contai... [more]
C3H44_ORYSJ2.2e-1238.5Zinc finger CCCH domain-contai... [more]
back to top
BLAST of Spo05119.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G32360.11.7e-9554.8Zinc finger (CCCH-type) family... [more]
AT3G19360.13.4e-4034.1Zinc finger (CCCH-type) family... [more]
AT2G35430.12.6e-3242.5Zinc finger C-x8-C-x5-C-x3-H t... [more]
AT3G12130.13.4e-850.0KH domain-containing protein /... [more]
AT1G68200.15.0e-762.0Zinc finger C-x8-C-x5-C-x3-H t... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3D4.10.1000.10coord: 88..123
score: 7.6E-15coord: 163..192
score: 3.3E-9coord: 220..255
score: 4.4
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 91..115
score: 2.8E-7coord: 225..250
score: 6.2
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 224..251
score: 1.1E-8coord: 164..191
score: 0.32coord: 90..116
score: 0.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 90..117
score: 13.141coord: 224..252
score: 15.563coord: 164..192
score: 13
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 163..192
score: 1.44E-7coord: 221..255
score: 6.54E-10coord: 87..121
score: 1.5
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 26..340
score: 1.9
NoneNo IPR availablePANTHERPTHR12547:SF18PROTEIN TIS11coord: 26..340
score: 1.9

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding