Spo10248.1 (mRNA) | SpinachBase

Overview


Name	Spo10248.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Gamma-secretase subunit Aph-1, putative
Location	chr3 : 15830311 .. 15839609 (+)
Sequence length	1272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTGTTGACTGTACATTCTCCCCAAAGCATCACCTTCTTCATCTGGGGGGATAGAGAGAGAAAGTAAGAAAGAGAAAGAAGGAGATGACGGTAGCAGCAGGCATTGGGTACGCATTAATAGCATTAGGCCCTTCATTATCACTCTTCATCTCTGTCATCGCCAAAAAACCCTTCTTGATCCTCACTGTTCTCTCCAGGTAAATTTTCACCATTTTTGGTACTTTTGGGCACTTTTCTTTTACACTGCATTTGAGCTCATATTATACGAAATTGAATCCAGAAAATGAATTTGGTAGTTGTCAATTTTATTGGGTATTTTTCAGATTCTTAATTACCCCTAATTTTGTTATTATTGATTGTAATGTCAATTGTATGTGTTATATAGAGGGTTTTCCAATAGAAGAGACTATTCTGTCTTCTTGGTTGTTGTGGTTCCTTAGTTTTCTGTTGCATTGTTGCATTTTTCATCCAGAAGGGTTGTGATTTGTTTGGGTGAAGTTCTTCTTTGTACTGGGTTGTGGTGGTTAGTATTTTACCCCATTTCGGTAGGCCTTAGGGTTTATGTGCTATTTTTCCATGTCTATGAAGTCGATAGTCTATACAGGGAGAAGTGATCTCAATTAGTATAAATTCAAAAAAAACGAAATAAAAAAGCTCAATCTGGCAAACTACCTGAAATATCCTTTTGGGATGAAATGCAATGACTTTGAGACAGTAAGAGTGTAAGAACGAGATGCGAGTACGATGAAACTTATGCTCGATTCTTGACTGCTTGCTGTGAGGTTTTTTTTACCGGATTAAATGGCTAGAGAGGATTTTGTTTGTTCTAGAACGGATCTTATAAGTTATAGCCTTAGCTATTTCTTATGTACACATGACGGAGGATGTATAATTTGTTTGGCTACTGTCTTTTTCGTTGTTATGTTAAGGGCTTTCTTATTTTCCATGTCCTGTTTCGTATTTCTAATTCTTCAAACTTATCATCTACTATTTGTTGGCTAGAGCTAGGATATTACGAACAATCCTAATCTGTTGTAATTGTTCATTGAACTTGATTAAACAGACATTGAGCATGGTCTTGAAATAGTCCTTAGTTTCCCTGCACATTAAGTCACATTGTCCTGTTCAACATAAATTTCAATTAAAACGATTTCACCAAACTTCTGTCTTACTACCAGTTGCTATATTGATTTTCTTCCTACTCACTCAAATATGTTGGGGTATGCTAGGTAATTCAATCATGATCCACTACTCCATACTTCTTTAGGAAAGCAATTTTTTTGTGGATGTCAGGGCATCTAAAAAACAATATATCTAACTATTCTTTCTGCATTTCCTCGAAAGAAAAACAAAAAAGAAATCTACTAATGAATATCCTTAAGGTATTTTGTACTGGAAGTGTGGACCATATGATTTGGATACTTTGTTTTGCCCAATTGACCTCATGTTTAAAAAATTAAAACAAAATATTTTTGCAGCTTTCAATTATTTTACTTCTTCTGTCGCTTATTTTTTTAAAAGCGGGTTTGGCTCGGATATTAAGACTAGCAATAAAGTAGAATAAAATAATTGGATGTCGATAGTGAGAGAGAAAATATAGGAAGTGTTACGGTGGAGAGAGAAGAGTTGAACCCATCTTGATGGTGTTGTTTTTGACACGACCCAAAAAAAAAGCATGAAGAGTATTTTGGGACTACAGGAAAGGAAAAATGGAAGGAGTAAGATGTAAGGGATGAGAGCACATTTATCCAACTTGTGTTAAAAGATGGGTTTTTTTCTTCTAATGTGGTGTTCTGTAAAGATAGTTTGCTTCACTGGTTGAATTTTTCTCCATTATAAAGATTTAATACCAATTCACGATCCCTAGAGGTTTTGTCTTGGTACAACTGAGAGATATCCGGCTGCCTGAGAATTATGGTTTGTTTATGACCTGAATAAAGGATTAAGTCATTGAGCTCTTCATTTCCTTTGGGCATAATATCTTTAGCTAAGTGATAAAATTTGATAGTTGGAACAGAAGCATTCAGTCTTTGGAGCATCTTTTTCGGGGGATAAGGATAACAGGAACTCAAACTTATGTGAAAGAAATTTGCTGACTGAGAAATTTTGTGTAGCCTGCCTAAGGCATTATCTGAGGTATTGAATAACCAACTTAGATCCACTTCTGAGTAACCTTTGATGTGAATAGCCGCCTTAGATTCACTTCTTAGTATACTGAAGAGTGAAGATACACATGGACTTTCCGTTCTTATTGCTTAATGCCATTACTCCAATGTTACTCCAATACCATTCCAGAGGTATTGTATAGCCACCTTATTGCTTATCATGTCATCTGTTCAATGTTTATAAAGAGGTTTCTATGGTGGAATATGTGGGGGAGGGTCAGATACATTGCATCATTACCTGTGCAGCGAAGATGTTCTTTTGGCCTTAACCCTACAATTGTAAATAGGTTTTTGCATTAAAGACCCTTAGGCAATCAACTGACTTATTACTTAATAATAGAAAACATTTAGCGACACATTTGCATTATACCATCGTAATCATTTCCTTTCTTTAAAAAGTCATCTGTGATTCTTTGTCCACTTGACTTGATCTTGAGACGTTTTCTCGCTGTACACAATTATTAGCAATTTCAACTTCATTTTGAAAGCTGCAGAGAACTATCCAAACTAACTGAATCTTTCCATATCTGCGAACTGACCCAAAAAAGTAGTTTTTTTCTTCTTCTAATCCTTGTATTTTATCATGGAAAAACTGAAGTCCTTATAGTCAGGATTTCTGACTATTGCTTAGCAACTTTGTACTGCAACTGGAAAATGGGAATTGCTTTATAGAAGTAGTCTAAAAGTTGGTGGATTGAACACTTAGGATTTTAACTAATGCTTGACATAATGTAGGTAGACCCATTTGATGCAACTTTGAGACATTAGCTTTAGTTCTGGACATGCGTTATCTAGATCTTGCTCTATGATGTAGCATAGTGAGAGTTTCTTTCAAGAAGCACTTTGCTAAAGAGTTTCTCTTAAGTAACTTGGACGAGGACTGATCATTTCCATTTTACAACAGCCATAGCCAAGCTACAGGCGTTGGTTTATTTTTAAATCTGGGGATACTCTGTTCTCTTTCTTGAAAACTGAAGTTACTCTAAGCTTTTAAGGAGTTAGATGGGAATTTTGATGCTCTGACCCTATGCAAATGATTCAAGGTAGAGGCCAATCTTATTACCTGATCAGTTTGATTTTGTCATAATTGTACGTGGTAGAGATTGACTCTAGGAGATGCCATGATGGTGAGCTGTATGAAAGAACCTTTCATATTTACCCTTAGGGTCTGAATTCGCTTTTTAGTCCTTGTCTTGCAGTATTACAATCTCCATTGTCCAGACTAGAAGGTTGTTAGGTTATTTTTTGAGTTCTTGTAAGTAGCTGCGTCGTAGTAGTATTTGGGTTCTGAATCTGATAGGGAAGTGAAGATGCCCTCAGTGGCATCAGTTTTTGTCTCACTTGTCGTTTATTTGAATTGCAGTACACTACTATGGCTGGTGAGTTTGATTATACTTTCAGGGCTTTGGAGGGGTTTCCTTCCTTTCAAGTCTACATCATGGTGGCCGTACGGAATTCTTGTCTTTACATCTGTTTGCTTTCAGGAAGGGCTTCGGATTCTTCTGTGGAAAGCTTACCTGTATGTAACTAAGTTGCCTCTAGTTTTAAATTTCCCTGCTAATGGCTACTTTGTTTTTTTAATTTGTTTTTCATTTTTATTATTATGCACTTACTCTGCCCATGTCACTTGTACATTCTTAGGTATCATGACTATCATCACTGTTTCTAAATTTGTTGAGTTATTTATCTCTTTTGCAAGGGTGAGCACCTATACAACATAGTTTCTGTAATCCTTTGATAGCTCTGAAACTTTTGGCCCATCTTCCAATTCTTCATCAATCACAATATTTTTCTATAAGAAAAGTACGTAACAGAAGAAATGAGAAATCCACATAAAAGAATTGAAGGACATAATTGTACTTGAGTAAATGTTTTGCGTTATGAGGTGACAGAAGGATATATTCGGCAATAATGGTAGTGCATTAGTTGCCTTTGGAGTAAGTCATAAATATGTTTTGCAGTTTGGTCGGAACTCAGCAATTTCTATACCTTAGCACAAGCCTTACTGTGAATGTGTAGTCCAATGACACACTAGTTGTACAGAATTAGATGAAAGTATGCTGTAAATTGGAATGAGAGTTTCCTGGTTGCAGTTAGTGTATAAAAAGGCGCGAAAAAGGCGCGCCTAGGCTCTAAGGCGCAAGGCGTTTGGAGCCATCGCCTTTTATTGTCTGGGCGAGGCGATTTTGATGAGGCGCACCTAAGGCGCACCTCCTGAGGAAAACACCATTTTTTTTTACTTTTTATTAGGGCGCCTCACTTCAATGAGGCGCGCCTAAGGCGCTGGGAACTCTAAATCGCCTTGGTGCGCCTTGAGCCTTTTTATACATTGGTTGCAGTGTGTTTGACGCCCTACAAGGGGTAGCTGCTAGTTTTGATGCAGGGATTTGTCTGTCTTATGATGATTTTGTTGCTGGCAGAAGTAATAATCATTGGTCATTTTCTTTCTTCCTGCAATGTATATGATTTGTGTGAATTTCAAAGAGAATGTTTATTCACGCTGTGTCGCTGTCCACTATTTCTCCCCTATAATAAGTAACTATTATCTTTCGAGACTTAAGTCGGTCTCTCTCTCCCTCTCCAAGGATGAGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGATTTTAATATTTCTAAGATAATACAATATCGACGTCATTACCAATTTACCATATGGGCAAGCTATGTCAACCTCGATCAAAGTAGCTAAGATTAGGAACTTTTTTTCTTTATTTAATTGCAGCTTTGCTTTGTGCTGATATTCCATAACATGTTATATAGATGTCAACAAGAGTAAAAGTTACGTTCCAAGGGTGCCTCCTATGCACCAAGTATGTCTTTGCAATTACTCTTATTTTACCTCTAACAGAGTTTAGTGTGTAAACTGTAAAGAATCTAAAGACTATCATCAAATATTTGAGCCTTCCCTTTTTTTGGTTGGTGGGGGAAGATCTGATGAGAGTAATCGACAGTGGGGAGTTTGATGGACCCGAGAGCGCTATACCGATTTCGTTGTTATAATGATAATTGGATATCATGGGATGAACCAAATCATTTTGGCATGAAACTAGTGTTTTTGAATGCTTTCCGCTACTTAAAAATAGTATAATCACATGTGAAGGCTGTGGCATAGGATTGCAAATAAGCTTTTAGTCCAAACAGTTTTGGGTTACTGACTCTTACTGTGTGATGTACTTTGATTTTGTTTCCGTAAACACCTTTGTGAAATATATTTAAGGTAAAGTTATACCTGATACTTATTGTTGTCTTGAAAATTCTTACATATTATCACTCATCTTCTTCCCTGTAACCTTGCACAGGAGGTTGGAGGACATGTTGGATGCATTTGCTGATAGGCTTTCGAAACCTCGCTTGTTTCTGACAGATAAGATGCAAATTGCTCTAGGTAAGCAGGAAATTTTTGTTATATGGATAAATACCCATCAATGCATTTCTATGATAATCCAATATGAACTTTGGGCTTTGATCTCACAAAAATGTTGTATGGATTTTATTCTCTTATGATTTCTTGTATGTTGTCGGTCTCCGTGTTGTACGTGGTCCTTTTGCAGCTGGTTTTTCCTTGTTTTTGACCTCAGAGTTCACGTTATTAGTTGAAAGTCTTGAGACTCCTCTTCCCTCTTTCTGTTATTCTCTAGAACTGTGTACCTATCTATAGGCCGTCAAAATGCGACCCTATCCGAAAACCGACCCGAACACGACCCAAAAATTTTGGGTCTTGAACAAGAATTTGTGACCCGTAACCCATTTTATCCGAACTCGAGCAGCCCGAAAAGTAATGGGTCAAAATCCGACCAAAACCGTTTTTGACCCAACCGATTGAAAATCATTGTATTTATAGTAATAAATGAGATTATGAGGAATTTTAAGCATAATAAACACGCTGATGTTACTATTGTTGGGTGTAATATGATTTTAATTTGAATTATACGCCATTTAATGGTTGAATTTGACTAAATATAAACTTGTGTAGGAAAATTTGTTAATTTGTGCCCGTATTTTGTATATTTATTACCTAAATTAATGAAAATGTAATACGTGTTTTAAAATCTCTAAACCCGAACCTGAAAGTGATCGATCCGAATTAACCAGAACTCGAAAATAATTTTTTACAAACCGACCCGGCCGACCTGTTTGACAGGTCTACCTATCTACCTGTGAGAGGAGAGGGGGAATTTGTTGTGTTCTTGAACTTTAACTGTTGCAGACCTTGCCTTAGGAATCACTGGTTCTGTGAAGGGAATCTGACTTATGGCTGTCAGAATTGAGGAGACTGTCTTGGGGATGTTGAACAATAGAACCTAGATATTTCACCTGCTGAGTTTTGGAGAAGAAGCCAGTCTATTTCTGATGATCTCGGTTCGTATCTTCTCTGTGGACTCGTGGAGACTTAAGTGCATTCTATAATCCTGCTAAATTATGCTAATTGTCGACAACTGATGGTGGAAAAACTTATTCTCTGGTAGCCAGATAAATGTTTTGATTGATTTTATTTTGTGCCATTGGTGGTTTCTGGCTTTTGTTCCTTGAGATGCTAAAATAAGTGCATTATGGAGATACATCTTGCTGTTTCTATGTATAGACGTCAATTATTCCTTTCCCTCCTGGCAATGGTTCCTTTTTATATATAAATATGATGCAGTCGTCCTTTTTTTTTGTTGTTGAACAGACTATCCTCTCTAATCCGGTTCATCTGTTTTTTCTCAAATCAATTGCAAGCAGCTGGTGGCTTAGGTCATGGTGTGGCTCATGCTGTTTTTTTCTGCCTTAGCCTCTTGACACCTTCATTTGGACCAGCAACTTATTATGCTGATAGATGCACGTGGATGCCTTTCTTTCTTATTTCTGGTGAGTCGGAACTTAATAGATTTCCTTTCAGTTTGTAGATACACCTACTTATGCGTGGAACCTGCTGAAGGCTCTCTAATTATCTCTTTTTGGTGGTTTTGGAAACTGGAAATCACCTGGGGGGTCGGACTTTCCTGTGGATGACCTATAAGACAGTGGTTCTCTCAATATTTAGAAATTAGAAAATGCCTGCAGCTTTCCCCCCTGCCTAAAGAAAACAGAAAAAAGAAAAATTTATCCAACATTTTCAGGTTCGAAGGTTAAACTCACAGATTCAATAAAAAAATCTACTCGTACTTGTATTTTTTTAGTTTAATTTTACTTTGCTTGATGGTGGTAGGGCAGTGTAAAACTTTGAATACTTTGCTATTAGGAAATTCAAGCTCGGAAATACTACTTTTGTCTGTAATGCATCTAAAGAAAATTTTGGATGAAAATCATGATCGTTTTTCCCTGAAATCATATTTCAAGTACTTCTAATATTCTTTTATGACTGATACTTTTTGACTTGGAAAAATACCTTTCTATTCAGTCAAACATCAATATATCTCACCCTGCAACTCCTTATTTCATTCAAGTAAGGGTGTTTATTTGTGTGTCTGTACTGTTGGAATAGGGATAAGTAGCTAACTAGCTATGAGGTGTTAACTTCACATTTGTTTATTTACTTTGGCTATCATCTGAAACACCCATGTGTGTGGTTGGCAGGTTATTGCTTTGGTTGATATATACAATTCCTGATATTTTTCTAAAGGTGAAACTTTTTGCTTTGTACATGGCAGCAATTATTGCTCTAGCATTTGTTACAATTCATACCTTCTCAATGGTCATTGCCTTCAATGGATATGCTGAATCGAAGAGAGTTGATCAGTATTTTGTTCCCGTAGTTCATCTGATTGCCGGAATGCTGGTATACATGCATCCCTCTTCTAAACTTTCAGCATACACTTTTATTTATAGAGATATGACGAATAAAGTGTGCATTTTTCTGCATGACATCTACGTTATTATGCCAATCAGCAAAATATGATCATTTTTCTGTTTTTGAATTTTGAGATCTCCATTATGACTGTTCATTGTAAGCTCTATGCTATGCTAGTTGTTGAGGAGATTACTTGTTATGGGATCCAAAACGTTTGGTCATGGGTTCATCTAATCAGAACGAGTAGAGTTGACGGAGATTAGAGAGAAGGTAAAAGGAGGGGAGTATATTACCTTCATTATGAGGTAGGAATGATGGATATATCTCAGAGAAATCCACTCTCTAGGATACTTAAGAAAATTCATGTCAAAATTCAAATAAAATTAGTTTTTAATATATATACGAAGTATTTATCAAAGCGCCTTTGACTCGCTGAGATGTCTATACTTCTTTCAATTTGACTGAAGGTTTAGACTGTTGACTTTTTTTGGTGTGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGTGCTTGATGAAGAAAATTCCAAGTACATTTGATTGTATCTCAGACTCAGGTGGAGGCACCATTTGATCTTTGAAGTAATAACCATAGACACATATAGGTGCAACTTTCTATTGAGTGCTGTGAATCTGTGATTAATGTCTTCCTCAAAATTAGATTTTATCGTGTTTCAGTTTATTGTGTTTCATTGCAAATTATCTGTTGACATGAACAAAAAACTTGCTGTTTTTTTTTTGCAGACGCTCATTAATTTTGCTCCTGGAGGGTGCATGATTTCCATTCCCTTGCTATATTTTATGGCTGCATTGACACTGATTCATTGTGGGAAGATGGCGTGGCGAAGAATGGTTGATGAACAGCGTAGAGGGATTACTTTGCAGTAGCTGTACGTTGTCTTTCGTGCAAATTCATCTGGTATTACTTTGCCAGTCCCACAATGCTCCTTAATTAAACCATACTCTTCGAGTCCCACTACAGAATCTTCTTCCAATGAATTAGCGAATCTGTATCTTTATACATTGTTCCTCTATTGAGCAACTCGATCTCCAGTTGTTGGCGGGTTAAACGGTCAGATGTTTTAAGGTTCAGGTAGAAGGCTGCTAAATGGGTGCAGTTTATAATAGTAATTTACCTCAGGATGTATACTTTTAACAATTACAGTCAACATGTAAATTTCACAATTAGACGACTAATTTGGTAACATATGTTTCTTACTAATAATACCATGTAAATGTTGTTGTAAACTCCAAATCTTTTAACATGCTCCTATTTTTTGGTTCTCGTATGCAATTTCTTGCGGAGGACTAATTTAGTT

mRNA sequence

ATTTTTTGTTGACTGTACATTCTCCCCAAAGCATCACCTTCTTCATCTGGGGGGATAGAGAGAGAAAGTAAGAAAGAGAAAGAAGGAGATGACGGTAGCAGCAGGCATTGGGTACGCATTAATAGCATTAGGCCCTTCATTATCACTCTTCATCTCTGTCATCGCCAAAAAACCCTTCTTGATCCTCACTGTTCTCTCCAGTACACTACTATGGCTGGTGAGTTTGATTATACTTTCAGGGCTTTGGAGGGGTTTCCTTCCTTTCAAGTCTACATCATGGTGGCCGTACGGAATTCTTGTCTTTACATCTGTTTGCTTTCAGGAAGGGCTTCGGATTCTTCTGTGGAAAGCTTACCTGAGGTTGGAGGACATGTTGGATGCATTTGCTGATAGGCTTTCGAAACCTCGCTTGTTTCTGACAGATAAGATGCAAATTGCTCTAGCTGGTGGCTTAGGTCATGGTGTGGCTCATGCTGTTTTTTTCTGCCTTAGCCTCTTGACACCTTCATTTGGACCAGCAACTTATTATGCTGATAGATGCACGTGGATGCCTTTCTTTCTTATTTCTGCAATTATTGCTCTAGCATTTGTTACAATTCATACCTTCTCAATGGTCATTGCCTTCAATGGATATGCTGAATCGAAGAGAGTTGATCAGTATTTTGTTCCCGTAGTTCATCTGATTGCCGGAATGCTGACGCTCATTAATTTTGCTCCTGGAGGGTGCATGATTTCCATTCCCTTGCTATATTTTATGGCTGCATTGACACTGATTCATTGTGGGAAGATGGCGTGGCGAAGAATGGTTGATGAACAGCGTAGAGGGATTACTTTGCAGTAGCTGTACGTTGTCTTTCGTGCAAATTCATCTGGTATTACTTTGCCAGTCCCACAATGCTCCTTAATTAAACCATACTCTTCGAGTCCCACTACAGAATCTTCTTCCAATGAATTAGCGAATCTGTATCTTTATACATTGTTCCTCTATTGAGCAACTCGATCTCCAGTTGTTGGCGGGTTAAACGGTCAGATGTTTTAAGGTTCAGGTAGAAGGCTGCTAAATGGGTGCAGTTTATAATAGTAATTTACCTCAGGATGTATACTTTTAACAATTACAGTCAACATGTAAATTTCACAATTAGACGACTAATTTGGTAACATATGTTTCTTACTAATAATACCATGTAAATGTTGTTGTAAACTCCAAATCTTTTAACATGCTCCTATTTTTTGGTTCTCGTATGCAATTTCTTGCGGAGGACTAATTTAGTT

Coding sequence (CDS)

ATGACGGTAGCAGCAGGCATTGGGTACGCATTAATAGCATTAGGCCCTTCATTATCACTCTTCATCTCTGTCATCGCCAAAAAACCCTTCTTGATCCTCACTGTTCTCTCCAGTACACTACTATGGCTGGTGAGTTTGATTATACTTTCAGGGCTTTGGAGGGGTTTCCTTCCTTTCAAGTCTACATCATGGTGGCCGTACGGAATTCTTGTCTTTACATCTGTTTGCTTTCAGGAAGGGCTTCGGATTCTTCTGTGGAAAGCTTACCTGAGGTTGGAGGACATGTTGGATGCATTTGCTGATAGGCTTTCGAAACCTCGCTTGTTTCTGACAGATAAGATGCAAATTGCTCTAGCTGGTGGCTTAGGTCATGGTGTGGCTCATGCTGTTTTTTTCTGCCTTAGCCTCTTGACACCTTCATTTGGACCAGCAACTTATTATGCTGATAGATGCACGTGGATGCCTTTCTTTCTTATTTCTGCAATTATTGCTCTAGCATTTGTTACAATTCATACCTTCTCAATGGTCATTGCCTTCAATGGATATGCTGAATCGAAGAGAGTTGATCAGTATTTTGTTCCCGTAGTTCATCTGATTGCCGGAATGCTGACGCTCATTAATTTTGCTCCTGGAGGGTGCATGATTTCCATTCCCTTGCTATATTTTATGGCTGCATTGACACTGATTCATTGTGGGAAGATGGCGTGGCGAAGAATGGTTGATGAACAGCGTAGAGGGATTACTTTGCAGTAG

Protein sequence

MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFKSTSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFNGYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMVDEQRRGITLQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo10248	Spo10248	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo10248.1	Spo10248.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10248.1.exon.1	Spo10248.1.exon.1	exon
Spo10248.1.exon.2	Spo10248.1.exon.2	exon
Spo10248.1.exon.3	Spo10248.1.exon.3	exon
Spo10248.1.exon.4	Spo10248.1.exon.4	exon
Spo10248.1.exon.5	Spo10248.1.exon.5	exon
Spo10248.1.exon.6	Spo10248.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10248.1.utr5p.1	Spo10248.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10248.1.CDS.1	Spo10248.1.CDS.1	CDS
Spo10248.1.CDS.2	Spo10248.1.CDS.2	CDS
Spo10248.1.CDS.3	Spo10248.1.CDS.3	CDS
Spo10248.1.CDS.4	Spo10248.1.CDS.4	CDS
Spo10248.1.CDS.5	Spo10248.1.CDS.5	CDS
Spo10248.1.CDS.6	Spo10248.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10248.1.utr3p.1	Spo10248.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo10248.1 vs. NCBI nr
Match: gi|902157617|gb|KNA06140.1| (hypothetical protein SOVF_183830 [Spinacia oleracea])

HSP 1 Score: 491.9 bits (1265), Expect = 6.700e-136
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK
Sbjct: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG
Sbjct: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV
Sbjct: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240

Query: 241 DEQRRGITLQ 251
           DEQRRGITLQ
Sbjct: 241 DEQRRGITLQ 250

[Close]

BLAST of Spo10248.1 vs. NCBI nr
Match: gi|731322328|ref|XP_010671828.1| (PREDICTED: gamma-secretase subunit APH1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 466.1 bits (1198), Expect = 3.900e-128
Identity = 232/250 (92.80%), Postives = 244/250 (97.60%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAG+GYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK
Sbjct: 1   MTVAAGVGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           ST+WWPY ILVFTSVCFQEGLRILLWKAY RLE MLDAFADRLSKPRLF+TDKMQIALAG
Sbjct: 61  STAWWPYAILVFTSVCFQEGLRILLWKAYKRLEGMLDAFADRLSKPRLFMTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHG+AHAVFFCLSLLTP+FGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGLAHAVFFCLSLLTPAFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAESKR+DQYFVP +HLIAGMLTLINFAPGGC+ISIPLLYF+AALTL+HCGKM WRR+V
Sbjct: 181 GYAESKRLDQYFVPTIHLIAGMLTLINFAPGGCIISIPLLYFVAALTLMHCGKMVWRRLV 240

Query: 241 DEQRRGITLQ 251
           DE+R GITLQ
Sbjct: 241 DERRTGITLQ 250

[Close]

BLAST of Spo10248.1 vs. NCBI nr
Match: gi|694372756|ref|XP_009363655.1| (PREDICTED: gamma-secretase subunit APH1-like [Pyrus x bretschneideri])

HSP 1 Score: 406.8 bits (1044), Expect = 2.800e-110
Identity = 194/245 (79.18%), Postives = 226/245 (92.24%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+AAGIGYAL+ALGPSLSLF+SVI+KKPFL+LTVLSSTLLWL+SLI+LSGLWR FLP K
Sbjct: 1   MTIAAGIGYALLALGPSLSLFVSVISKKPFLVLTVLSSTLLWLISLIVLSGLWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           S++WWPYGIL+FTSV FQEGLR+L WK Y +LED LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  SSAWWPYGILIFTSVVFQEGLRVLFWKVYKKLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++ DRC+ +PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDRCSKIPFFLLSALIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVPVVHL+AGM+TL+NFA GGC+I IPLL+F+A LTL+HCGKM WRR+ 
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGMVTLVNFASGGCIIGIPLLFFIAILTLLHCGKMVWRRLT 240

Query: 241 DEQRR 246
           + + R
Sbjct: 241 ENRHR 245

[Close]

BLAST of Spo10248.1 vs. NCBI nr
Match: gi|657960986|ref|XP_008372075.1| (PREDICTED: gamma-secretase subunit APH1-like [Malus domestica])

HSP 1 Score: 405.6 bits (1041), Expect = 6.300e-110
Identity = 193/245 (78.78%), Postives = 226/245 (92.24%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+AAGIGYAL+ALGPSLSLF+SVI+KKPFL+LTVLSSTLLWL+SLI+LSGLWR FLP K
Sbjct: 1   MTIAAGIGYALLALGPSLSLFVSVISKKPFLVLTVLSSTLLWLISLIVLSGLWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           S++WWPYGIL+FTSV FQEGLR+L WK Y +LED LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  SSAWWPYGILIFTSVVFQEGLRVLFWKVYKKLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++ DRC+ +PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDRCSKIPFFLLSALIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVPVVHL+AG++TL+NFA GGC+I IPLL+F+A LTL+HCGKM WRR+ 
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGLVTLVNFASGGCIIGIPLLFFIAILTLLHCGKMVWRRLT 240

Query: 241 DEQRR 246
           + + R
Sbjct: 241 ENRHR 245

[Close]

BLAST of Spo10248.1 vs. NCBI nr
Match: gi|694434301|ref|XP_009344376.1| (PREDICTED: gamma-secretase subunit APH1-like [Pyrus x bretschneideri])

HSP 1 Score: 405.2 bits (1040), Expect = 8.200e-110
Identity = 193/245 (78.78%), Postives = 226/245 (92.24%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+AAGIGYAL+ALGPSLSLF+SVI+KKPFL+LTVLSSTLLWL+SLI+LSGLWR FLP K
Sbjct: 1   MTIAAGIGYALVALGPSLSLFVSVISKKPFLVLTVLSSTLLWLISLIVLSGLWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           S++WWPYGIL+FTSV FQEGLR+L WK Y +LED LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  SSAWWPYGILIFTSVVFQEGLRVLFWKVYKKLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++ DRC+ +PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDRCSKIPFFLLSALIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVPVVHL+AGM+TL++FA GGC+I IPLL+F+A LTL+HCGKM WRR+ 
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGMVTLVDFASGGCIIGIPLLFFIAILTLLHCGKMVWRRLT 240

Query: 241 DEQRR 246
           + + R
Sbjct: 241 ENRHR 245

[Close]

BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFX4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_183830 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 4.600e-136
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK
Sbjct: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG
Sbjct: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV
Sbjct: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240

Query: 241 DEQRRGITLQ 251
           DEQRRGITLQ
Sbjct: 241 DEQRRGITLQ 250

[Close]

BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CW85_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g054960 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 2.700e-128
Identity = 232/250 (92.80%), Postives = 244/250 (97.60%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAG+GYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK
Sbjct: 1   MTVAAGVGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           ST+WWPY ILVFTSVCFQEGLRILLWKAY RLE MLDAFADRLSKPRLF+TDKMQIALAG
Sbjct: 61  STAWWPYAILVFTSVCFQEGLRILLWKAYKRLEGMLDAFADRLSKPRLFMTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHG+AHAVFFCLSLLTP+FGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGLAHAVFFCLSLLTPAFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAESKR+DQYFVP +HLIAGMLTLINFAPGGC+ISIPLLYF+AALTL+HCGKM WRR+V
Sbjct: 181 GYAESKRLDQYFVPTIHLIAGMLTLINFAPGGCIISIPLLYFVAALTLMHCGKMVWRRLV 240

Query: 241 DEQRRGITLQ 251
           DE+R GITLQ
Sbjct: 241 DERRTGITLQ 250

[Close]

BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: M5XTL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010446mg PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.300e-109
Identity = 191/245 (77.96%), Postives = 223/245 (91.02%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+AAGIGYAL+ALGPSLSLF+SVI+KKPFL+LTVLSSTLLWL SLI+LSG+WR FLP K
Sbjct: 1   MTIAAGIGYALLALGPSLSLFVSVISKKPFLVLTVLSSTLLWLTSLIVLSGIWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           S++WWPY IL+FTSV FQEGLR+L WK Y RLED LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  SSTWWPYSILIFTSVAFQEGLRVLFWKVYKRLEDTLDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFC+SLLTP+FGP T++ DRC+ +PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPGTFFVDRCSKIPFFLLSALIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVP+VHL+AGM+TL+NFA GGC+I IPLLYF+A LTL+HCGKM WRR+ 
Sbjct: 181 GYAERNKVDQLFVPIVHLVAGMVTLVNFASGGCIIGIPLLYFIAILTLLHCGKMVWRRLT 240

Query: 241 DEQRR 246
           + + R
Sbjct: 241 ENRGR 245

[Close]

BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: A0A061ERN6_THECC (Processing isoform 1 OS=Theobroma cacao GN=TCM_020119 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.400e-108
Identity = 193/247 (78.14%), Postives = 224/247 (90.69%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTV AGIGYAL+ALGPSLSLF+SVI+KKPFLILT+LSSTL+WL+SLIILSG+WR FLP K
Sbjct: 1   MTVTAGIGYALLALGPSLSLFVSVISKKPFLILTLLSSTLVWLISLIILSGIWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           ST+WWP+ IL+F+SV FQEGLR+L WK Y RLED+LDAFADR+SKPRL+LTDKMQIALAG
Sbjct: 61  STTWWPFAILIFSSVAFQEGLRLLFWKVYKRLEDILDAFADRVSKPRLYLTDKMQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFC+SLLTP+FGPATY+ DRC+ +PFFL+SAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCVSLLTPAFGPATYFVDRCSQIPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQ FVP VHL AGM+TLINFA GGC+I IPLL+ MA LTL+HCG+M WR + 
Sbjct: 181 GYAEGNKVDQLFVPSVHLAAGMMTLINFASGGCIIGIPLLFLMAILTLMHCGRMVWRSLT 240

Query: 241 DEQRRGI 248
           + QR+G+
Sbjct: 241 ENQRQGM 247

[Close]

BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Match: B9HH67_POPTR (Gamma-secretase subunit APH1-like family protein OS=Populus trichocarpa GN=POPTR_0007s02080g PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.800e-108
Identity = 194/244 (79.51%), Postives = 223/244 (91.39%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYAL+ALGPSLSLFISVI+KKPFLILTVLSSTLLWL+SLI+L+G+WR FLP K
Sbjct: 1   MTVAAGIGYALLALGPSLSLFISVISKKPFLILTVLSSTLLWLMSLIVLAGVWRAFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           ST+WWP+ IL+ TSV FQEGLRIL WK Y RLED+LDAFADRL+KPRLFLTDKM IALAG
Sbjct: 61  STTWWPFAILILTSVSFQEGLRILFWKVYKRLEDILDAFADRLAKPRLFLTDKMLIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT++ D+C+ +PFFL+SAIIALAFVTIHT SMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDKCSQLPFFLVSAIIALAFVTIHTCSMVIAFN 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYAE  +VDQYFVP VHL+AGM+TL+NFA GGC++ IPLLYFMA LTL+HCGKM WRR+ 
Sbjct: 181 GYAEGNKVDQYFVPAVHLVAGMVTLVNFASGGCVVGIPLLYFMAILTLLHCGKMVWRRLS 240

Query: 241 DEQR 245
           + ++
Sbjct: 241 ETRQ 244

[Close]

BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1_ARATH (Gamma-secretase subunit APH1-like OS=Arabidopsis thaliana GN=At2g31440 PE=2 SV=2)

HSP 1 Score: 390.6 bits (1002), Expect = 1.300e-107
Identity = 189/245 (77.14%), Postives = 220/245 (89.80%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYAL+ALGPSLSLF+SVI++KPFLILTVLSSTLLWLVSLIILSGLWR FLP K
Sbjct: 1   MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           +  WWPY +LV TSVCFQEGLR L WK Y RLED+LD+FADR+S+PRLFLTDK+QIALAG
Sbjct: 61  ANVWWPYALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT+Y +RC+ +PFFLISAIIALAFVTIHTFSMVIAF 
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYA+  +VDQ  VPV+HL AGMLTL+NFA  GC+I +PLLY +A+LTL+HCGKM W+R++
Sbjct: 181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLL 240

Query: 241 DEQRR 246
           + + +
Sbjct: 241 ESRNQ 245

[Close]

BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1_DROME (Gamma-secretase subunit Aph-1 OS=Drosophila melanogaster GN=aph-1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.300e-17
Identity = 68/208 (32.69%), Postives = 106/208 (50.96%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT+    G   IA GP  +LF+  IA  P  I+ ++++   WL+SL+I S LW   +P K
Sbjct: 1   MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLI-SSLWYALIPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQI-ALA 120
              +  +G++   SVCFQE  R ++++     E  L A A+        +TD   I A  
Sbjct: 61  --EFLAFGVVF--SVCFQEAFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 120

Query: 121 GGLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAF 180
            GLG G+   +F  +++L    GP T      T + FF+ SA  AL+ + +HTF  VI F
Sbjct: 121 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFF 180

Query: 181 NGYAESKRVDQYFVPVVHLIAGMLTLIN 208
           N +  +  +   +V   HL   ++TL+N
Sbjct: 181 NAFDTNNYIHIGYVVFSHLFVSLITLLN 197

[Close]

BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1B_HUMAN (Gamma-secretase subunit APH-1B OS=Homo sapiens GN=APH1B PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 4.200e-13
Identity = 65/214 (30.37%), Postives = 101/214 (47.20%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLW---RGFL 60
           MT A   G A IA GP+L+L++  IA +P  I+ +++    WLVSL+I S +W   R  +
Sbjct: 1   MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60

Query: 61  PFKSTSWWPYGIL--VFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQ 120
             K      Y ++   F SV  QE  R   +K   +  + L +     + P + L     
Sbjct: 61  DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGLKSINPGETAPSMRL----- 120

Query: 121 IALAGGLGHGVAHAVFFCLSLLTPSFGPAT--YYADRCTWMPFFLISAIIALAFVTIHTF 180
           +A   GLG G+   VF  ++ L+ S GP T   + D      FFL SA + L  + +H F
Sbjct: 121 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDS---PQFFLYSAFMTLVIILLHVF 180

Query: 181 SMVIAFNGYAESKRVDQYFVPVVHLIAGMLTLIN 208
             ++ F+G  + K      V + HL+    T I+
Sbjct: 181 WGIVFFDGCEKKKWGILLIVLLTHLLVSAQTFIS 206

[Close]

BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1B_MOUSE (Gamma-secretase subunit APH-1B OS=Mus musculus GN=Aph1b PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.100e-13
Identity = 63/216 (29.17%), Postives = 101/216 (46.76%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MT A   G A IA GP+L+L++  IA  P  ++ +++    WLVSL++ S  W       
Sbjct: 1   MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60

Query: 61  STSWWP-------YGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDK 120
                P       +G+L+  SVC QE  R+  +K   +  + L +     + P + L   
Sbjct: 61  DNRDGPVQNYLLIFGVLL--SVCIQELFRLAYYKLLKKASEGLKSINPEETAPSMRL--- 120

Query: 121 MQIALAGGLGHGVAHAVFFCLSLLTPSFGPAT--YYADRCTWMPFFLISAIIALAFVTIH 180
             +A   GLG G+   VF  ++ L+ S GP T   + D      FFL SA + L  + +H
Sbjct: 121 --LAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDS---PQFFLNSAFMTLVVIMLH 180

Query: 181 TFSMVIAFNGYAESKRVDQYFVPVVHLIAGMLTLIN 208
            F  V+ F+G  ++K      V + HL+    T ++
Sbjct: 181 VFWGVVFFDGCEKNKWYTLLTVLLTHLVVSTQTFLS 206

[Close]

BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Match: APH1B_PONAB (Gamma-secretase subunit APH-1B OS=Pongo abelii GN=APH1B PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.300e-13
Identity = 64/214 (29.91%), Postives = 101/214 (47.20%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLW---RGFL 60
           MT A   G A IA GP+L+L++  IA +P  I+ +++    WLVSL+I S +W   R  +
Sbjct: 1   MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60

Query: 61  PFKSTSWWPYGIL--VFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQ 120
             K      Y ++   F SV  QE  R   ++   +  + L +     + P + L     
Sbjct: 61  DNKDGPTQKYLLIFGTFVSVYIQEMFRFAYYRLLKKASEGLKSINPGETAPSMRL----- 120

Query: 121 IALAGGLGHGVAHAVFFCLSLLTPSFGPAT--YYADRCTWMPFFLISAIIALAFVTIHTF 180
           +A   GLG G+   VF  ++ L+ S GP T   + D      FFL SA + L  + +H F
Sbjct: 121 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDS---PQFFLYSAFMTLVIILLHVF 180

Query: 181 SMVIAFNGYAESKRVDQYFVPVVHLIAGMLTLIN 208
             ++ F+G  + K      V + HL+    T I+
Sbjct: 181 WGIVFFDGCEKKKWGILLIVLLTHLLVSAQTFIS 206

[Close]

BLAST of Spo10248.1 vs. TAIR (Arabidopsis)
Match: AT2G31440.1 (INVOLVED IN: positive regulation of catalytic activity, protein processing)

HSP 1 Score: 390.6 bits (1002), Expect = 7.400e-109
Identity = 189/245 (77.14%), Postives = 220/245 (89.80%), Query Frame = 1


		  
Query: 1   MTVAAGIGYALIALGPSLSLFISVIAKKPFLILTVLSSTLLWLVSLIILSGLWRGFLPFK 60
           MTVAAGIGYAL+ALGPSLSLF+SVI++KPFLILTVLSSTLLWLVSLIILSGLWR FLP K
Sbjct: 1   MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLK 60

Query: 61  STSWWPYGILVFTSVCFQEGLRILLWKAYLRLEDMLDAFADRLSKPRLFLTDKMQIALAG 120
           +  WWPY +LV TSVCFQEGLR L WK Y RLED+LD+FADR+S+PRLFLTDK+QIALAG
Sbjct: 61  ANVWWPYALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120

Query: 121 GLGHGVAHAVFFCLSLLTPSFGPATYYADRCTWMPFFLISAIIALAFVTIHTFSMVIAFN 180
           GLGHGVAHAVFFCLSLLTP+FGPAT+Y +RC+ +PFFLISAIIALAFVTIHTFSMVIAF 
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180

Query: 181 GYAESKRVDQYFVPVVHLIAGMLTLINFAPGGCMISIPLLYFMAALTLIHCGKMAWRRMV 240
           GYA+  +VDQ  VPV+HL AGMLTL+NFA  GC+I +PLLY +A+LTL+HCGKM W+R++
Sbjct: 181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLL 240

Query: 241 DEQRR 246
           + + +
Sbjct: 241 ESRNQ 245

The following BLAST results are available for this feature:

BLAST of Spo10248.1 vs. NCBI nr
BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
BLAST of Spo10248.1 vs. TAIR (Arabidopsis)

BLAST of Spo10248.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902157617\|gb\|KNA06140.1\|	6.7e-136	100.	hypothetical protein SOVF_1838...	[more]
gi\|731322328\|ref\|XP_010671828.1\|	3.9e-128	92.8	PREDICTED: gamma-secretase sub...	[more]
gi\|694372756\|ref\|XP_009363655.1\|	2.8e-110	79.1	PREDICTED: gamma-secretase sub...	[more]
gi\|657960986\|ref\|XP_008372075.1\|	6.3e-110	78.7	PREDICTED: gamma-secretase sub...	[more]
gi\|694434301\|ref\|XP_009344376.1\|	8.2e-110	78.7	PREDICTED: gamma-secretase sub...	[more]

BLAST of Spo10248.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QFX4_SPIOL	4.6e-136	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CW85_BETVU	2.7e-128	92.8	Uncharacterized protein OS=Bet...	[more]
M5XTL9_PRUPE	6.3e-109	77.9	Uncharacterized protein OS=Pru...	[more]
A0A061ERN6_THECC	1.4e-108	78.1	Processing isoform 1 OS=Theobr...	[more]
B9HH67_POPTR	1.8e-108	79.5	Gamma-secretase subunit APH1-l...	[more]

BLAST of Spo10248.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
APH1_ARATH	1.3e-107	77.1	Gamma-secretase subunit APH1-l...	[more]
APH1_DROME	1.3e-17	32.6	Gamma-secretase subunit Aph-1 ...	[more]
APH1B_HUMAN	4.2e-13	30.3	Gamma-secretase subunit APH-1B...	[more]
APH1B_MOUSE	7.1e-13	29.1	Gamma-secretase subunit APH-1B...	[more]
APH1B_PONAB	9.3e-13	29.9	Gamma-secretase subunit APH-1B...	[more]

BLAST of Spo10248.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G31440.1	7.4e-109	77.1	INVOLVED IN: positive regulati...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009294	Gamma-secretase subunit Aph-1	PANTHER	PTHR12889	GAMMA-SECRETASE SUBUNIT APH-1	coord: 2..245 score: 1.6E
IPR009294	Gamma-secretase subunit Aph-1	PFAM	PF06105	Aph-1	coord: 2..235 score: 5.3
None	No IPR available	PANTHER	PTHR12889:SF0	GAMMA-SECRETASE SUBUNIT APH-1	coord: 2..245 score: 1.6E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0016485	protein processing
biological_process	GO:0007219	Notch signaling pathway
cellular_component	GO:0016021	integral component of membrane