Spo27024.1 (mRNA) | SpinachBase

Overview


Name	Spo27024.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	(Germin-like protein) (Precursor)
Location	SpoScf_01486 : 54121 .. 54747 (+)
Sequence length	627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAACCTTGTAGCTTTCTTCGCCTTCACTCTTTTGGTTTCTCTTTGTCAAGCTATCGAGCTCGACTTTTGTGTAGGAGATACTACTCTCCCTAGGGGACCTGAAGGATTCGCTTGCAAGGATCCCGCTAACGTCACTACAGATGATTTTGTTTTCACAGGCTTTCGTCATGAAAGCTTCACTGCAAACCTATTTAGAAGTAATGTCACTTTAGGGTTTGTGGATAATTTCCCAGCTTTGAATGGCCTAGGTATTTCCATGGCAAGGTTAGACTTTGCTGTAGGTGGTGTTATCCCAGTACACTCCCACCGAACATCTGAAGTTATAATCGTGACCAGAGGATCAATAATTGCGGGATTCATTGACGCAAGCAATAATGCATTCTACAGAAGGCTCGAGGTTGGAGACGTTATGATCTTCCCACAAGCCATGCTTCATTTTCAAATCAACGTTGGTAGAACTCCGGCTACTGCAATTGTTAGCTTGAACGGTGCTAACCCAGCTGTCCAATTCACAACCACCTCCTTATTCGCCGGCAATTTACCTGCCGATATTGCTCAACAGATCACTCTTCTAAGTCAGGACGAGGTGATGAGGATGAAAAGGTTATTTGGCACTGCTTAG

mRNA sequence

ATGAATAACCTTGTAGCTTTCTTCGCCTTCACTCTTTTGGTTTCTCTTTGTCAAGCTATCGAGCTCGACTTTTGTGTAGGAGATACTACTCTCCCTAGGGGACCTGAAGGATTCGCTTGCAAGGATCCCGCTAACGTCACTACAGATGATTTTGTTTTCACAGGCTTTCGTCATGAAAGCTTCACTGCAAACCTATTTAGAAGTAATGTCACTTTAGGGTTTGTGGATAATTTCCCAGCTTTGAATGGCCTAGGTATTTCCATGGCAAGGTTAGACTTTGCTGTAGGTGGTGTTATCCCAGTACACTCCCACCGAACATCTGAAGTTATAATCGTGACCAGAGGATCAATAATTGCGGGATTCATTGACGCAAGCAATAATGCATTCTACAGAAGGCTCGAGGTTGGAGACGTTATGATCTTCCCACAAGCCATGCTTCATTTTCAAATCAACGTTGGTAGAACTCCGGCTACTGCAATTGTTAGCTTGAACGGTGCTAACCCAGCTGTCCAATTCACAACCACCTCCTTATTCGCCGGCAATTTACCTGCCGATATTGCTCAACAGATCACTCTTCTAAGTCAGGACGAGGTGATGAGGATGAAAAGGTTATTTGGCACTGCTTAG

Coding sequence (CDS)

ATGAATAACCTTGTAGCTTTCTTCGCCTTCACTCTTTTGGTTTCTCTTTGTCAAGCTATCGAGCTCGACTTTTGTGTAGGAGATACTACTCTCCCTAGGGGACCTGAAGGATTCGCTTGCAAGGATCCCGCTAACGTCACTACAGATGATTTTGTTTTCACAGGCTTTCGTCATGAAAGCTTCACTGCAAACCTATTTAGAAGTAATGTCACTTTAGGGTTTGTGGATAATTTCCCAGCTTTGAATGGCCTAGGTATTTCCATGGCAAGGTTAGACTTTGCTGTAGGTGGTGTTATCCCAGTACACTCCCACCGAACATCTGAAGTTATAATCGTGACCAGAGGATCAATAATTGCGGGATTCATTGACGCAAGCAATAATGCATTCTACAGAAGGCTCGAGGTTGGAGACGTTATGATCTTCCCACAAGCCATGCTTCATTTTCAAATCAACGTTGGTAGAACTCCGGCTACTGCAATTGTTAGCTTGAACGGTGCTAACCCAGCTGTCCAATTCACAACCACCTCCTTATTCGCCGGCAATTTACCTGCCGATATTGCTCAACAGATCACTCTTCTAAGTCAGGACGAGGTGATGAGGATGAAAAGGTTATTTGGCACTGCTTAG

Protein sequence

MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAGFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPADIAQQITLLSQDEVMRMKRLFGTA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo27024	Spo27024	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo27024.1	Spo27024.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27024.1.exon.1	Spo27024.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27024.1.CDS.1	Spo27024.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo27024.1 vs. NCBI nr
Match: gi|902210708|gb|KNA16511.1| (hypothetical protein SOVF_088480 [Spinacia oleracea])

HSP 1 Score: 408.7 bits (1049), Expect = 6.200e-111
Identity = 206/208 (99.04%), Postives = 206/208 (99.04%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           M NLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 209
           NLPADIAQQITLLS DEVMRMKRLFGTA
Sbjct: 181 NLPADIAQQITLLSHDEVMRMKRLFGTA 208

[Close]

BLAST of Spo27024.1 vs. NCBI nr
Match: gi|594553152|gb|AHM10392.1| (GLP [Spinacia oleracea])

HSP 1 Score: 408.7 bits (1049), Expect = 6.200e-111
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           M NLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVD+FPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDSFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 209
           NLPADIAQQITLLSQDEVMRMKRLFGTA
Sbjct: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 208

[Close]

BLAST of Spo27024.1 vs. NCBI nr
Match: gi|902168695|gb|KNA07543.1| (hypothetical protein SOVF_170820 [Spinacia oleracea])

HSP 1 Score: 396.0 bits (1016), Expect = 4.100e-107
Identity = 202/209 (96.65%), Postives = 204/209 (97.61%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLC-QAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHE 60
           MNNLVAFF FTLLVSL  QAIELDFCVGDTTLPRGP+GFACKDPANVTTDDFVFTGFRHE
Sbjct: 1   MNNLVAFFTFTLLVSLSDQAIELDFCVGDTTLPRGPKGFACKDPANVTTDDFVFTGFRHE 60

Query: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120
           SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA
Sbjct: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120

Query: 121 GFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180
           GFIDA+NNAFYRRLEVGDVMIFPQ MLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA
Sbjct: 121 GFIDATNNAFYRRLEVGDVMIFPQTMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180

Query: 181 GNLPADIAQQITLLSQDEVMRMKRLFGTA 209
           GNLPA IAQQITLLSQDEVMRMKRLFGTA
Sbjct: 181 GNLPAHIAQQITLLSQDEVMRMKRLFGTA 209

[Close]

BLAST of Spo27024.1 vs. NCBI nr
Match: gi|902168694|gb|KNA07542.1| (hypothetical protein SOVF_170810 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 379.8 bits (974), Expect = 3.100e-102
Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           MNNLVAFF FTL+VSLCQAIELDFCVGDTTLPRGPEGFACKD ANVTTDDFVFTGFRHES
Sbjct: 1   MNNLVAFFTFTLMVSLCQAIELDFCVGDTTLPRGPEGFACKDSANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQ+MLHFQINVGRT ATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQSMLHFQINVGRTSATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQDE 198
           NLPADIAQQITLLSQ E
Sbjct: 181 NLPADIAQQITLLSQGE 197

[Close]

BLAST of Spo27024.1 vs. NCBI nr
Match: gi|902176656|gb|KNA08808.1| (hypothetical protein SOVF_159240 [Spinacia oleracea])

HSP 1 Score: 341.3 bits (874), Expect = 1.200e-90
Identity = 171/208 (82.21%), Postives = 184/208 (88.46%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           MNNLV FFA +LLV +  AIELDFCVGDTTLPRGP+G+ACKDPANVTTDDFVFTGFR E 
Sbjct: 1   MNNLVVFFALSLLVYVSHAIELDFCVGDTTLPRGPQGYACKDPANVTTDDFVFTGFRGER 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
            T N+FR NVTL FV+ FPALNGLGISMARLDF VGGVIPVHSHRTSE+I V RGSIIAG
Sbjct: 61  TTTNMFRYNVTLAFVNQFPALNGLGISMARLDFGVGGVIPVHSHRTSEIITVIRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASN A+YRRLEVGDVMIFPQ+MLHFQINVG TPATAIVSLNGANPAVQFT  SLFAG
Sbjct: 121 FIDASNTAYYRRLEVGDVMIFPQSMLHFQINVGTTPATAIVSLNGANPAVQFTMDSLFAG 180

Query: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 209
           NLPA+IA+QITLLS +EV RM+R F  A
Sbjct: 181 NLPANIAEQITLLSNEEVTRMRRSFDNA 208

[Close]

BLAST of Spo27024.1 vs. UniProtKB/TrEMBL
Match: W8S9T6_SPIOL (GLP OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 4.300e-111
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           M NLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVD+FPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDSFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 209
           NLPADIAQQITLLSQDEVMRMKRLFGTA
Sbjct: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 208

[Close]

BLAST of Spo27024.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAI3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088480 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 4.300e-111
Identity = 206/208 (99.04%), Postives = 206/208 (99.04%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           M NLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 209
           NLPADIAQQITLLS DEVMRMKRLFGTA
Sbjct: 181 NLPADIAQQITLLSHDEVMRMKRLFGTA 208

[Close]

BLAST of Spo27024.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLH3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_170820 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 2.900e-107
Identity = 202/209 (96.65%), Postives = 204/209 (97.61%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLC-QAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHE 60
           MNNLVAFF FTLLVSL  QAIELDFCVGDTTLPRGP+GFACKDPANVTTDDFVFTGFRHE
Sbjct: 1   MNNLVAFFTFTLLVSLSDQAIELDFCVGDTTLPRGPKGFACKDPANVTTDDFVFTGFRHE 60

Query: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120
           SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA
Sbjct: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120

Query: 121 GFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180
           GFIDA+NNAFYRRLEVGDVMIFPQ MLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA
Sbjct: 121 GFIDATNNAFYRRLEVGDVMIFPQTMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180

Query: 181 GNLPADIAQQITLLSQDEVMRMKRLFGTA 209
           GNLPA IAQQITLLSQDEVMRMKRLFGTA
Sbjct: 181 GNLPAHIAQQITLLSQDEVMRMKRLFGTA 209

[Close]

BLAST of Spo27024.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJX0_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_170810 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.100e-102
Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           MNNLVAFF FTL+VSLCQAIELDFCVGDTTLPRGPEGFACKD ANVTTDDFVFTGFRHES
Sbjct: 1   MNNLVAFFTFTLMVSLCQAIELDFCVGDTTLPRGPEGFACKDSANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQ+MLHFQINVGRT ATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQSMLHFQINVGRTSATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQDE 198
           NLPADIAQQITLLSQ E
Sbjct: 181 NLPADIAQQITLLSQGE 197

[Close]

BLAST of Spo27024.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQ38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_159240 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 8.400e-91
Identity = 171/208 (82.21%), Postives = 184/208 (88.46%), Query Frame = 1


		  
Query: 1   MNNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           MNNLV FFA +LLV +  AIELDFCVGDTTLPRGP+G+ACKDPANVTTDDFVFTGFR E 
Sbjct: 1   MNNLVVFFALSLLVYVSHAIELDFCVGDTTLPRGPQGYACKDPANVTTDDFVFTGFRGER 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
            T N+FR NVTL FV+ FPALNGLGISMARLDF VGGVIPVHSHRTSE+I V RGSIIAG
Sbjct: 61  TTTNMFRYNVTLAFVNQFPALNGLGISMARLDFGVGGVIPVHSHRTSEIITVIRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASN A+YRRLEVGDVMIFPQ+MLHFQINVG TPATAIVSLNGANPAVQFT  SLFAG
Sbjct: 121 FIDASNTAYYRRLEVGDVMIFPQSMLHFQINVGTTPATAIVSLNGANPAVQFTMDSLFAG 180

Query: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 209
           NLPA+IA+QITLLS +EV RM+R F  A
Sbjct: 181 NLPANIAEQITLLSNEEVTRMRRSFDNA 208

[Close]

BLAST of Spo27024.1 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 7.400e-48
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1


		  
Query: 8   FAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLFR 67
           F F LL+S   A   DFCV D   P GP GF+CK PA+V  +DFVF+G      T+N+ +
Sbjct: 12  FTFFLLLSSSNAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGLGIAGNTSNIIK 71

Query: 68  SNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDASN 127
           + VT  FV  FP +NGLGIS+ARLD AVGGV+P H+H   SEV+IV +G+I AGF+ + N
Sbjct: 72  AAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASDN 131

Query: 128 NAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPADI 187
             + + LE GD+M+FPQ +LHFQ+N G  PA A  S   A+P +Q    +LF  +LP ++
Sbjct: 132 TPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKNDLPTEV 191

Query: 188 AQQITLLSQDEVMRMKRLFG 207
             Q T L   ++ ++K + G
Sbjct: 192 IAQTTFLDAAQIKKLKGVLG 211

[Close]

BLAST of Spo27024.1 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.200e-45
Identity = 90/201 (44.78%), Postives = 127/201 (63.18%), Query Frame = 1


		  
Query: 7   FFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLF 66
           FF F LL+S   A   DFCV D   P GP G++CK PA VT +DFV++G      T N+ 
Sbjct: 6   FFTFFLLLSSSHASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNII 65

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   FP +NGLGIS+ARLD   GGVIP H+H   SEV++V +G+IIAGF+ + 
Sbjct: 66  KAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD 125

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L+ GD+M+FPQ +LHFQ+N G TPA A  S +  +P +Q    +LF  +LP +
Sbjct: 126 NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKNDLPTE 185

Query: 187 IAQQITLLSQDEVMRMKRLFG 207
           +  Q T L   ++ ++K + G
Sbjct: 186 LIAQTTFLDAAQIKKLKGVLG 206

[Close]

BLAST of Spo27024.1 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.000e-45
Identity = 89/201 (44.28%), Postives = 128/201 (63.68%), Query Frame = 1


		  
Query: 7   FFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLF 66
           FF F LL+S   A   DFCV D   P GP G++CK PA VT +DFV++G      T N+F
Sbjct: 6   FFTFFLLLSTSHASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIF 65

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   FP +NGLGIS+ARLD   GGV+P H+H   SEV++V +G+IIAGF+ + 
Sbjct: 66  KAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD 125

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L+ GD+++FPQ +LHFQ+N G TPA A  S +  +P +Q    +LF  +L  +
Sbjct: 126 NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKNDLATE 185

Query: 187 IAQQITLLSQDEVMRMKRLFG 207
           +  Q TLL   ++ ++K + G
Sbjct: 186 LIAQTTLLDAPQIKKLKGVLG 206

[Close]

BLAST of Spo27024.1 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.000e-44
Identity = 86/201 (42.79%), Postives = 130/201 (64.68%), Query Frame = 1


		  
Query: 7   FFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLF 66
           FF  +L+ ++  A   DFCV D   P+ P G++CK+P  VT +DF FTG      T+N+ 
Sbjct: 8   FFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNII 67

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   +  +NGLG+S+ARLD A GGVIP+H+H   SEV++V +G+I AGFI ++
Sbjct: 68  KAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSA 127

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L  GD M+FPQ +LHFQ+N G+ PA A V+   ++P +Q    +LFA +LP++
Sbjct: 128 NKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSE 187

Query: 187 IAQQITLLSQDEVMRMKRLFG 207
           + +  T LS  EV ++K + G
Sbjct: 188 LVEATTFLSDAEVKKLKGVLG 208

[Close]

BLAST of Spo27024.1 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.500e-44
Identity = 87/201 (43.28%), Postives = 129/201 (64.18%), Query Frame = 1


		  
Query: 7   FFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLF 66
           FF  +L  S+  A   DFCV D   P+ P G++CK+P  VT +DF F+G      T+N+ 
Sbjct: 8   FFILSLFSSISFASVQDFCVADPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVI 67

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   F  LNGL +S+ARLD A GGVIP+H+H   SEV++V +G+I AGFI ++
Sbjct: 68  KAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSA 127

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L  GD M+FPQ +LHFQ+N G+ PA A V+   ++P +Q    +LFA +LP++
Sbjct: 128 NKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSE 187

Query: 187 IAQQITLLSQDEVMRMKRLFG 207
           + +  T LS +EV ++K + G
Sbjct: 188 LVEATTFLSDEEVKKLKGVLG 208

[Close]

BLAST of Spo27024.1 vs. TAIR (Arabidopsis)
Match: AT5G20630.1 (germin 3)

HSP 1 Score: 179.1 bits (453), Expect = 2.800e-45
Identity = 86/201 (42.79%), Postives = 130/201 (64.68%), Query Frame = 1


		  
Query: 7   FFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLF 66
           FF  +L+ ++  A   DFCV D   P+ P G++CK+P  VT +DF FTG      T+N+ 
Sbjct: 8   FFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNII 67

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   +  +NGLG+S+ARLD A GGVIP+H+H   SEV++V +G+I AGFI ++
Sbjct: 68  KAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSA 127

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L  GD M+FPQ +LHFQ+N G+ PA A V+   ++P +Q    +LFA +LP++
Sbjct: 128 NKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSE 187

Query: 187 IAQQITLLSQDEVMRMKRLFG 207
           + +  T LS  EV ++K + G
Sbjct: 188 LVEATTFLSDAEVKKLKGVLG 208

[Close]

BLAST of Spo27024.1 vs. TAIR (Arabidopsis)
Match: AT1G72610.1 (germin-like protein 1)

HSP 1 Score: 166.4 bits (420), Expect = 1.900e-41
Identity = 87/204 (42.65%), Postives = 120/204 (58.82%), Query Frame = 1


		  
Query: 4   LVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTA 63
           L   F  +LL +L  A   DFCV +      P G+ C  P +V   DFVF+G      T 
Sbjct: 2   LRTIFLLSLLFALSNASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTT 61

Query: 64  NLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHR-TSEVIIVTRGSIIAGFI 123
           N+  + VT  F   FP LNGLG+S ARLD A  GVIP+H+H   SEV+ V  GSI AGF+
Sbjct: 62  NIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFV 121

Query: 124 DASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNL 183
            ++N  + + L+ G VM+FPQ +LHFQIN G++ A+A+V+ N ANP +Q    +LFA +L
Sbjct: 122 SSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANSL 181

Query: 184 PADIAQQITLLSQDEVMRMKRLFG 207
           P ++    T L    V ++K + G
Sbjct: 182 PTELVVGTTFLDATTVKKLKGVLG 205

[Close]

BLAST of Spo27024.1 vs. TAIR (Arabidopsis)
Match: AT3G04200.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 7.400e-30
Identity = 73/191 (38.22%), Postives = 105/191 (54.97%), Query Frame = 1


		  
Query: 23  DFCVGDTTLPRG-PEGFACKDPANVTTDDFVFTGFRHESFTANLFRSNVTLGFVDNFPAL 82
           DFCV  +   R    G  CKDP +VT +DF ++G      T N   SNVT   V+  P L
Sbjct: 33  DFCVAASETNRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGL 92

Query: 83  NGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDA---SNNAFYRRLEVGD 142
           N LG+S+ARLDFA GG  P H H R +E+++VT+G ++ GF+ +   +N  FY+ L+ GD
Sbjct: 93  NTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGD 152

Query: 143 VMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGN--LPADIAQQITLLSQ 202
           V +FP  ++HFQ+NV RT A A       NP       ++F  N  +P ++  +   L  
Sbjct: 153 VFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQLDV 212

Query: 203 DEVMRMKRLFG 207
             V  +  +FG
Sbjct: 213 KLVRFLHIVFG 223

[Close]

BLAST of Spo27024.1 vs. TAIR (Arabidopsis)
Match: AT5G38960.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-29
Identity = 70/192 (36.46%), Postives = 105/192 (54.69%), Query Frame = 1


		  
Query: 23  DFCVGDTTLPRG--PEGFACKDPANVTTDDFVFTGFRHESFT-ANLFRSNVTLGFVDNFP 82
           DFC+G  T        G  CKDP  VT DDF F+G      T ++   SNVT   V+  P
Sbjct: 30  DFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIP 89

Query: 83  ALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDA--SNNAFYRRLEVG 142
            LN LGIS+ R+D+ + G  P H+H R +E+++V  G++  GF  +   N  F + L  G
Sbjct: 90  GLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKG 149

Query: 143 DVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD--IAQQITLLS 202
           DV +FP+ ++HFQ+N+G+ PA A  SL+  NP V     +LF    P D  +  +   L 
Sbjct: 150 DVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLD 209

Query: 203 QDEVMRMKRLFG 207
              ++++++ FG
Sbjct: 210 PKVIIQLQKKFG 221

[Close]

BLAST of Spo27024.1 vs. TAIR (Arabidopsis)
Match: AT5G38910.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-29
Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 1


		  
Query: 23  DFCVGDTTLPRGP--EGFACKDPANVTTDDFVFTGFRHESFTAN-LFRSNVTLGFVDNFP 82
           DFCVG  T   G    G  CKDP  VT +DF FTG  HE+   N    SNVT   V+N P
Sbjct: 30  DFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGL-HEARPPNPKTGSNVTAVNVNNLP 89

Query: 83  ALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS--NNAFYRRLEVG 142
            LN LGIS+ R+D+ V G  P H+H R SEV+ V  G++  GF+ ++  N  F + L  G
Sbjct: 90  GLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNPENRLFSKTLYEG 149

Query: 143 DVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           DV +FPQ ++HFQ+NVG+ PA A   L+  NP V     ++F  N   D
Sbjct: 150 DVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQID 197

The following BLAST results are available for this feature:

BLAST of Spo27024.1 vs. NCBI nr
BLAST of Spo27024.1 vs. UniProtKB/TrEMBL
BLAST of Spo27024.1 vs. ExPASy Swiss-Prot
BLAST of Spo27024.1 vs. TAIR (Arabidopsis)

BLAST of Spo27024.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210708\|gb\|KNA16511.1\|	6.2e-111	99.0	hypothetical protein SOVF_0884...	[more]
gi\|594553152\|gb\|AHM10392.1\|	6.2e-111	99.0	GLP [Spinacia oleracea]	[more]
gi\|902168695\|gb\|KNA07543.1\|	4.1e-107	96.6	hypothetical protein SOVF_1708...	[more]
gi\|902168694\|gb\|KNA07542.1\|	3.1e-102	96.9	hypothetical protein SOVF_1708...	[more]
gi\|902176656\|gb\|KNA08808.1\|	1.2e-90	82.2	hypothetical protein SOVF_1592...	[more]

BLAST of Spo27024.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
W8S9T6_SPIOL	4.3e-111	99.0	GLP OS=Spinacia oleracea PE=2 ...	[more]
A0A0K9RAI3_SPIOL	4.3e-111	99.0	Uncharacterized protein OS=Spi...	[more]
A0A0K9QLH3_SPIOL	2.9e-107	96.6	Uncharacterized protein OS=Spi...	[more]
A0A0K9QJX0_SPIOL	2.1e-102	96.9	Uncharacterized protein (Fragm...	[more]
A0A0K9QQ38_SPIOL	8.4e-91	82.2	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo27024.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ABP20_PRUPE	7.4e-48	46.5	Auxin-binding protein ABP20 OS...	[more]
AB19A_PRUPE	1.2e-45	44.7	Auxin-binding protein ABP19a O...	[more]
AB19B_PRUPE	2.0e-45	44.2	Auxin-binding protein ABP19b O...	[more]
GL33_ARATH	5.0e-44	42.7	Germin-like protein subfamily ...	[more]
GLP1_SINAL	6.5e-44	43.2	Germin-like protein 1 OS=Sinap...	[more]

BLAST of Spo27024.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G20630.1	2.8e-45	42.7	germin 3	[more]
AT1G72610.1	1.9e-41	42.6	germin-like protein 1	[more]
AT3G04200.1	7.4e-30	38.2	RmlC-like cupins superfamily p...	[more]
AT5G38960.1	1.7e-29	36.4	RmlC-like cupins superfamily p...	[more]
AT5G38910.1	1.7e-29	44.3	RmlC-like cupins superfamily p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 131..151 score: 2.3E-13coord: 164..179 score: 2.3E-13coord: 101..121 score: 2.3
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 68..197 score: 4.0
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 63..199 score: 4.4
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 21..203 score: 5.27
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 22..203 score: 2.2
None	No IPR available	PANTHER	PTHR31238	FAMILY NOT NAMED	coord: 3..206 score: 5.9
None	No IPR available	PANTHER	PTHR31238:SF21	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 3..206 score: 5.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0045735	nutrient reservoir activity