Spo24558.1 (mRNA) | SpinachBase

Overview


Name	Spo24558.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Blue copper protein
Location	chr3 : 58434928 .. 58435917 (-)
Sequence length	858

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAATTAACTGGATAAGCATCATATTAGTCAACAAAACCATGTTAACTTTCAAGTTGTAGCTGTCAATTATTGACTTGTTTCCTATATAATGTTGCATCATGGCCCCTTTGATTTAAGCTAAGCGTACATTCTCTATCTACTTGTTTTCAGCATCTTTAGTTTGAGAGATATCAGAGAGATATGGCATTGGCAGCAGCATTTCTTCTATTCCTCCTGGCCGCGCCGTCGGTCTTTGCCACCAATTACCCGGTTGTTTGGGATCTAACCACCAACTACTCGTCTTGGGCCACCAGACCGCTGATTGCTGGTGATACGCTTAGTAAGTCTTCTTTGCTTTGCTATGTGGCTTTAACCTTTACACATAACTGTACATTCCATGAATATCATGCATAAGTTGAAACACTATTAAAAAAAATTGCTTAATAATTGGTTGGGTGTTGACAAATACCAGCATTCAGCTACAGTAGCGGCAGTCACAATGTGGAAGTTGTAAACAAAAATGCCTACGATAGTTGTTCTTCTAGCAATGCCCTACAGACACACACTGGTGGAACAAACATTATTACCTTAGCCGAGGGTCCAACGTACTTCATCTGTGGCTTCCCTACCCACTGTACTAATGGCATGAAGCTACAAATAACTGCCAGAGCTTCAAGTTCCACACCTTCATCAACGAACACCACCGGCTCAACTCCTGCTGCGGGTAGCACCGGAGCCGCTGGACTTTCAAGCGTGACTCCTTTGATGTTTGGTTTTCCACTTGTTTTGTTTGCTTTAACGAGCTAGAGAAGAGGCAGTGCAGATGATATAAGGAGTTTGTTGTGGATTTAATTTCAAAAGAGATGTATATCGTATTTAACTAGTGTCGTTTTTAAAATTTCATCTCATTTTGTAATTCTTTGTTAGTATGCACTCTGTAATTTTTTATGATCTAATATGATGCATTCAGCTATTACTAGCTTTTGAATTATTTCATAACAATAGCAC

mRNA sequence

ATTTAATTAACTGGATAAGCATCATATTAGTCAACAAAACCATGTTAACTTTCAAGTTGTAGCTGTCAATTATTGACTTGTTTCCTATATAATGTTGCATCATGGCCCCTTTGATTTAAGCTAAGCGTACATTCTCTATCTACTTGTTTTCAGCATCTTTAGTTTGAGAGATATCAGAGAGATATGGCATTGGCAGCAGCATTTCTTCTATTCCTCCTGGCCGCGCCGTCGGTCTTTGCCACCAATTACCCGGTTGTTTGGGATCTAACCACCAACTACTCGTCTTGGGCCACCAGACCGCTGATTGCTGGTGATACGCTTACATTCAGCTACAGTAGCGGCAGTCACAATGTGGAAGTTGTAAACAAAAATGCCTACGATAGTTGTTCTTCTAGCAATGCCCTACAGACACACACTGGTGGAACAAACATTATTACCTTAGCCGAGGGTCCAACGTACTTCATCTGTGGCTTCCCTACCCACTGTACTAATGGCATGAAGCTACAAATAACTGCCAGAGCTTCAAGTTCCACACCTTCATCAACGAACACCACCGGCTCAACTCCTGCTGCGGGTAGCACCGGAGCCGCTGGACTTTCAAGCGTGACTCCTTTGATGTTTGGTTTTCCACTTGTTTTGTTTGCTTTAACGAGCTAGAGAAGAGGCAGTGCAGATGATATAAGGAGTTTGTTGTGGATTTAATTTCAAAAGAGATGTATATCGTATTTAACTAGTGTCGTTTTTAAAATTTCATCTCATTTTGTAATTCTTTGTTAGTATGCACTCTGTAATTTTTTATGATCTAATATGATGCATTCAGCTATTACTAGCTTTTGAATTATTTCATAACAATAGCAC

Coding sequence (CDS)

ATGGCATTGGCAGCAGCATTTCTTCTATTCCTCCTGGCCGCGCCGTCGGTCTTTGCCACCAATTACCCGGTTGTTTGGGATCTAACCACCAACTACTCGTCTTGGGCCACCAGACCGCTGATTGCTGGTGATACGCTTACATTCAGCTACAGTAGCGGCAGTCACAATGTGGAAGTTGTAAACAAAAATGCCTACGATAGTTGTTCTTCTAGCAATGCCCTACAGACACACACTGGTGGAACAAACATTATTACCTTAGCCGAGGGTCCAACGTACTTCATCTGTGGCTTCCCTACCCACTGTACTAATGGCATGAAGCTACAAATAACTGCCAGAGCTTCAAGTTCCACACCTTCATCAACGAACACCACCGGCTCAACTCCTGCTGCGGGTAGCACCGGAGCCGCTGGACTTTCAAGCGTGACTCCTTTGATGTTTGGTTTTCCACTTGTTTTGTTTGCTTTAACGAGCTAG

Protein sequence

MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVVNKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSSTNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24558	Spo24558	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24558.1	Spo24558.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24558.1.utr5p.1	Spo24558.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24558.1.CDS.2	Spo24558.1.CDS.2	CDS
Spo24558.1.CDS.1	Spo24558.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24558.1.utr3p.1	Spo24558.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24558.1.exon.2	Spo24558.1.exon.2	exon
Spo24558.1.exon.1	Spo24558.1.exon.1	exon

Homology

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BLAST of Spo24558.1 vs. NCBI nr
Match: gi|902217262|gb|KNA17649.1| (hypothetical protein SOVF_078030 [Spinacia oleracea])

HSP 1 Score: 299.7 bits (766), Expect = 3.000e-78
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60
           MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV
Sbjct: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60

Query: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS 120
           NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS
Sbjct: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS 120

Query: 121 TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS 158
           TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS
Sbjct: 121 TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS 157

[Close]

BLAST of Spo24558.1 vs. NCBI nr
Match: gi|731341567|ref|XP_010681961.1| (PREDICTED: uclacyanin-2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 149.8 bits (377), Expect = 3.900e-33
Identity = 87/157 (55.41%), Postives = 104/157 (66.24%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60
           M    A L+ LLAAPSVFA  YPVVW+L  +YSSWA RPL A DTL F+YS+ +HN+ VV
Sbjct: 1   MKFVTAILVILLAAPSVFALEYPVVWNLGNDYSSWADRPLTANDTLLFTYSN-AHNLLVV 60

Query: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSS---T 120
           N+  YD+C  SNA+ +HT G  +I L  GP YFICG   HCT GM+LQ+    S+S   T
Sbjct: 61  NRGDYDNCVPSNAITSHTDGRTVIPLTPGPMYFICGIGNHCTQGMRLQVNVSTSASGGTT 120

Query: 121 PSSTNTT--GSTPAAGSTGAAGLSSVTPLMFGFPLVL 153
           PSST  T   S+  AGS GA GLS  T +MFG PL L
Sbjct: 121 PSSTAGTPPSSSTPAGSNGATGLSMATHVMFGLPLAL 156

[Close]

BLAST of Spo24558.1 vs. NCBI nr
Match: gi|645253256|ref|XP_008232494.1| (PREDICTED: uclacyanin-2-like [Prunus mume])

HSP 1 Score: 102.8 bits (255), Expect = 5.500e-19
Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWA-TRPLIAGDTLTFSYSSGSH 60
           MA+A A ++ LLAAP+V+   + V     W+   +Y +WA ++    GDTL F+Y + SH
Sbjct: 1   MAIATALVILLLAAPAVYGVQHTVGDTDGWESNVDYVTWAASKTFTVGDTLLFTYGA-SH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
           +V+ VN+  Y SCSSSNA+ TH+ G   I L++ GP YFIC  P HC +GMKL +T  A+
Sbjct: 61  SVDQVNQAGYSSCSSSNAIGTHSDGNTSIPLSQAGPVYFICPTPGHCASGMKLTVTVVAA 120

Query: 121 SSTPSSTNTTGSTPA 130
            S P+++ TT S PA
Sbjct: 121 GSPPTTSPTTPSPPA 134

[Close]

BLAST of Spo24558.1 vs. NCBI nr
Match: gi|694395807|ref|XP_009373210.1| (PREDICTED: uclacyanin-3 [Pyrus x bretschneideri])

HSP 1 Score: 102.4 bits (254), Expect = 7.100e-19
Identity = 78/176 (44.32%), Postives = 102/176 (57.95%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWA-TRPLIAGDTLTFSYSSGSH 60
           MA+A A L+ LLAAP+V+   + V     W  + +Y SWA +     GDTL F+Y S SH
Sbjct: 1   MAIATALLILLLAAPTVYGVQHIVGDASGWSTSVDYDSWAASNSFTVGDTLVFNYGS-SH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
            V++VN+  Y SCSSSN+L+T+  G   ITL++ GP YFIC    HC NGMKL +   A+
Sbjct: 61  KVDIVNQADYASCSSSNSLKTYDDGATTITLSQPGPAYFICPSAGHCANGMKLSVNVVAA 120

Query: 121 -------SSTPSSTNTT-GSTPA-----AGSTGAAGLSSVTPLMFGFPLVLFALTS 158
                  S+TP ST TT GS P+         GAA  +S+   M GFPLVL  L +
Sbjct: 121 GTPSGTPSTTPPSTPTTPGSNPSPPPPPPPPKGAA--NSLDMNMLGFPLVLATLVA 173

[Close]

BLAST of Spo24558.1 vs. NCBI nr
Match: gi|697127476|ref|XP_009617784.1| (PREDICTED: uclacyanin-3-like [Nicotiana tomentosiformis])

HSP 1 Score: 100.5 bits (249), Expect = 2.700e-18
Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 1


		  
Query: 4   AAAFLLFLL-AAPSVFATNYPVV----WDLTTNYSSWATRPLI-AGDTLTFSYSSGSHNV 63
           A A LLFLL A+P  FA N+ V     W  T +YS+WA       GDTL F+Y  GSH+V
Sbjct: 5   AVATLLFLLVASPVAFAANHVVGGSGGWSQTGDYSTWAAGETFNVGDTLEFNYG-GSHSV 64

Query: 64  EVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARASSS 123
           +V++K+ Y++C++ NAL++H+ G   I L++ GP YF C    HC +GMKL +  + SSS
Sbjct: 65  DVISKDDYENCNTGNALESHSDGKTTIKLSKAGPMYFTCSAFGHCQSGMKLAVDVKDSSS 124

Query: 124 TPSSTNTTGSTPAAGST 134
           TPS+ +TT STP+  ST
Sbjct: 125 TPSTPSTTPSTPSTPST 140

[Close]

BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFB0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_078030 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.100e-78
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60
           MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV
Sbjct: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60

Query: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS 120
           NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS
Sbjct: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS 120

Query: 121 TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS 158
           TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS
Sbjct: 121 TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS 157

[Close]

BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2K0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g144730 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.700e-33
Identity = 87/157 (55.41%), Postives = 104/157 (66.24%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60
           M    A L+ LLAAPSVFA  YPVVW+L  +YSSWA RPL A DTL F+YS+ +HN+ VV
Sbjct: 1   MKFVTAILVILLAAPSVFALEYPVVWNLGNDYSSWADRPLTANDTLLFTYSN-AHNLLVV 60

Query: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSS---T 120
           N+  YD+C  SNA+ +HT G  +I L  GP YFICG   HCT GM+LQ+    S+S   T
Sbjct: 61  NRGDYDNCVPSNAITSHTDGRTVIPLTPGPMYFICGIGNHCTQGMRLQVNVSTSASGGTT 120

Query: 121 PSSTNTT--GSTPAAGSTGAAGLSSVTPLMFGFPLVL 153
           PSST  T   S+  AGS GA GLS  T +MFG PL L
Sbjct: 121 PSSTAGTPPSSSTPAGSNGATGLSMATHVMFGLPLAL 156

[Close]

BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: M5X4F6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016927mg PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.200e-18
Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWA-TRPLIAGDTLTFSYSSGSH 60
           MA+A A ++ LLAAP+V+   + V     W+   +Y +WA ++    GDTL F+Y + SH
Sbjct: 1   MAIATALVILLLAAPAVYGVQHTVGDTAGWESNVDYVTWAASKTFTVGDTLLFTYGA-SH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
           +V+ VN+  Y SCSSSNA+ TH+ G   I L++ GP YFIC  P HC +GMK+ +T  A+
Sbjct: 61  SVDQVNQAGYSSCSSSNAIGTHSDGNTSIPLSQAGPVYFICPTPGHCASGMKVTVTVVAA 120

Query: 121 SSTPSSTNTTGSTPAAGSTGAAGLSSVTP 144
            S P+++ TT S P   ST +   S+ +P
Sbjct: 121 GSPPTTSPTTPSPPT--STPSPPTSTPSP 146

[Close]

BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MZW4_GOSAR (Blue copper OS=Gossypium arboreum GN=F383_32300 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.200e-17
Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWAT-RPLIAGDTLTFSYSSGSH 60
           M LAAA L  LLAAP+ FA  Y V     W  T +Y SW   +    GDTL F+Y  GSH
Sbjct: 1   MGLAAALLFLLLAAPAAFAEQYTVGDSSGWTTTGDYQSWVQGKTFTVGDTLLFTYG-GSH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
           +VE V+K+ YD+C++ NA+++++ G  +ITL+  G  YFIC    HC  GMKL I   A+
Sbjct: 61  SVEEVSKSDYDNCNTGNAIKSYSDGNTVITLSNPGAMYFICPTIGHCAGGMKLAINVVAA 120

Query: 121 S-------STPSSTNTTGSTPAAGST 134
           S       STPS + T   TP +G T
Sbjct: 121 SGNSPSTPSTPSGSTTPSGTPPSGGT 145

[Close]

BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: F4YAW2_GOSHI (Copper binding protein 3 OS=Gossypium hirsutum GN=BCP3 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.200e-17
Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 1


		  
Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWAT-RPLIAGDTLTFSYSSGSH 60
           M LAAA L  LLAAP+ FA  Y V     W  T +Y SW   +    GDTL F+Y  GSH
Sbjct: 1   MGLAAALLFLLLAAPAAFAEQYTVGDSSGWTTTGDYQSWVQGKTFTVGDTLLFTYG-GSH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
           +VE V+K+ YD+C++ NA+++++ G  +ITL+  G  YFIC    HC  GMKL I   A+
Sbjct: 61  SVEEVSKSDYDNCNTGNAIKSYSDGNTVITLSNPGAMYFICPTIGHCAGGMKLAINVVAA 120

Query: 121 S-------STPSSTNTTGSTPAAGST 134
           S       STPS + T   TP +G T
Sbjct: 121 SGNSPSTPSTPSGSTTPSGTPPSGGT 145

[Close]

BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.400e-14
Identity = 62/155 (40.00%), Postives = 89/155 (57.42%), Query Frame = 1


		  
Query: 2   ALAAAFLLFLL--AAPSVFATNYPVV----WDLTTNYSSWATRPLIA-GDTLTFSYSSGS 61
           AL   FLL ++  A PS+ AT Y V     W +  +YS+WA+    A GD+L F+Y +G+
Sbjct: 6   ALVLCFLLAIINMALPSL-ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGA 65

Query: 62  HNVEVVNKNAYDSCSSSNALQTH-TGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARA 121
           H V+ V ++ Y SC+S N++ T  TG T I     G  YFICG P H T GMKL I  +A
Sbjct: 66  HTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKA 125

Query: 122 SSSTPSSTNTTGS-----TPAAGSTGAAGLSSVTP 144
           SS + ++ + T S     +P++  T AA  ++ TP
Sbjct: 126 SSGSSAAPSATPSSSGKGSPSSDDTPAATTTTTTP 159

[Close]

BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.800e-14
Identity = 60/137 (43.80%), Postives = 75/137 (54.74%), Query Frame = 1


		  
Query: 3   LAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNV 62
           +AAA LLFL A P+VFA  + V     W    +Y+ W T +    GDTL F Y   SH+V
Sbjct: 5   VAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGL-SHSV 64

Query: 63  EVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQI---TARA 122
            VV+K  YD+C SS A Q    G   I L   G  +F+C    HC NGMKL +    A  
Sbjct: 65  SVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAP 124

Query: 123 SSSTPSSTNTTGSTPAA 131
           S STPSS  +T STP++
Sbjct: 125 SPSTPSSPPSTPSTPSS 140

[Close]

BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.400e-11
Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = 1


		  
Query: 7   FLLFLLAAPSVFATNYPVVWDLTTN-------YSSWAT-RPLIAGDTLTFSYSSGSHNVE 66
           FL+ + AA  VFA +Y V  D           Y++WAT +    GD L F +++G H+V 
Sbjct: 10  FLVLVFAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVA 69

Query: 67  VVNKNAYDSCSSSNALQTHT-GGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSST 126
           VV++ A+++C     +   T     I+    GP YFIC    HC  G KL IT  A+ +T
Sbjct: 70  VVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGAT 129

Query: 127 PSSTNTTGSTPAAGSTGAAG 138
             +T   G+TPA GST + G
Sbjct: 130 GGATPGAGATPAPGSTPSTG 149

[Close]

BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 7.200e-11
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 1


		  
Query: 6   AFLLFLLAAPSVFATNYPV----VWDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNVEVV 65
           A  + LL A  V A  Y V    +W  T N   W   +   AGD L F+Y+   HNV  V
Sbjct: 20  AVSVLLLQADYVQAATYTVGDSGIW--TFNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKV 79

Query: 66  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITA 112
           +  +Y++C +    + +T G + ITL++G  +FIC FP HC + MK+ +TA
Sbjct: 80  DSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKIAVTA 128

[Close]

BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.000e-9
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 1


		  
Query: 29  TTNYSSW-ATRPLIAGDTLTFSYSSGSHNVEVVNKNAYDSCSSSNALQTHTGGTNIITLA 88
           T   S W A +   AGD L F Y+   HNV  V    Y SC++S   +    G + ITL+
Sbjct: 42  TFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLS 101

Query: 89  EGPTYFICGFPTHCTNGMKLQITA 112
            G  YFIC  P HC  G+K+ +TA
Sbjct: 102 RGTNYFICSVPGHCQGGLKIAVTA 125

[Close]

BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT1G72230.1 (Cupredoxin superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.700e-16
Identity = 56/142 (39.44%), Postives = 77/142 (54.23%), Query Frame = 1


		  
Query: 8   LLFLLAAPSVFATNYPVVWDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNVEVVNKNAYD 67
           + F + AP+  A+ +PV W L  +YSS AT +    GDT+ F+Y +G H V+ V+++ Y 
Sbjct: 14  IFFNVFAPASSAS-HPVEWSLGKDYSSLATGKSFAVGDTIVFNYGAG-HTVDEVSESDYK 73

Query: 68  SCSSSNALQTHTGGTNIITL-AEGPTYFICGFPTHCTNGMKLQITARASSSTPSSTNTTG 127
           SC+  NA+ + + GT  I L   GP YFICG P HCT GMKL +   A+SS         
Sbjct: 74  SCTLGNAISSDSSGTTSIALKTPGPHYFICGIPGHCTGGMKLSVIVPAASS--------- 133

Query: 128 STPAAGSTGAAGLSSVTPLMFG 148
                GSTG       TP+  G
Sbjct: 134 ----GGSTGDGTTDKNTPVQDG 140

[Close]

BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT3G60280.1 (uclacyanin 3)

HSP 1 Score: 80.5 bits (197), Expect = 1.000e-15
Identity = 60/137 (43.80%), Postives = 75/137 (54.74%), Query Frame = 1


		  
Query: 3   LAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNV 62
           +AAA LLFL A P+VFA  + V     W    +Y+ W T +    GDTL F Y   SH+V
Sbjct: 5   VAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGL-SHSV 64

Query: 63  EVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQI---TARA 122
            VV+K  YD+C SS A Q    G   I L   G  +F+C    HC NGMKL +    A  
Sbjct: 65  SVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAP 124

Query: 123 SSSTPSSTNTTGSTPAA 131
           S STPSS  +T STP++
Sbjct: 125 SPSTPSSPPSTPSTPSS 140

[Close]

BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT1G22480.1 (Cupredoxin superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.600e-15
Identity = 52/134 (38.81%), Postives = 74/134 (55.22%), Query Frame = 1


		  
Query: 3   LAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNVEVVN 62
           L    L+F + A +  A+   V W L T+Y+   T +    GDT+ F+Y +G H V+ V+
Sbjct: 5   LGCLVLIFSMVAQASSAS-LTVNWSLGTDYTPLTTGKTFSVGDTIVFNYGAG-HTVDEVS 64

Query: 63  KNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARASSSTPSS 122
           +N Y SC+  N++ + + GT  I L   GP YFICG P HC  GMKL +T  ++SS   +
Sbjct: 65  ENDYKSCTLGNSITSDSSGTTTIALTTTGPRYFICGIPGHCAAGMKLAVTVASNSSNGVA 124

Query: 123 TNTTGSTPAAGSTG 135
             TT  TP  G  G
Sbjct: 125 GGTTTPTPFTGGGG 136

[Close]

BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT3G60270.1 (Cupredoxin superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 4.800e-13
Identity = 54/139 (38.85%), Postives = 72/139 (51.80%), Query Frame = 1


		  
Query: 2   ALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWATRPLI-AGDTLTFSYSSGSHN 61
           A A   LL L+A P+VFA  + V     W +   Y+SW +      GDTL F Y   SH+
Sbjct: 6   ATALLLLLLLVAVPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGP-SHS 65

Query: 62  VEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKL--QITARA 121
           V VVNK  YD C +S   Q+ + G   I L + G  +F+C  P HC+ GMKL  Q+ A  
Sbjct: 66  VAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVLAAV 125

Query: 122 SSSTPSSTNTTGSTPAAGS 133
           S   P S +    +P+A S
Sbjct: 126 SLEPPPSPSAPSPSPSAPS 143

[Close]

BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT5G20230.1 (blue-copper-binding protein)

HSP 1 Score: 70.9 bits (172), Expect = 8.100e-13
Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = 1


		  
Query: 7   FLLFLLAAPSVFATNYPVVWDLTTN-------YSSWAT-RPLIAGDTLTFSYSSGSHNVE 66
           FL+ + AA  VFA +Y V  D           Y++WAT +    GD L F +++G H+V 
Sbjct: 10  FLVLVFAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVA 69

Query: 67  VVNKNAYDSCSSSNALQTHT-GGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSST 126
           VV++ A+++C     +   T     I+    GP YFIC    HC  G KL IT  A+ +T
Sbjct: 70  VVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGAT 129

Query: 127 PSSTNTTGSTPAAGSTGAAG 138
             +T   G+TPA GST + G
Sbjct: 130 GGATPGAGATPAPGSTPSTG 149

The following BLAST results are available for this feature:

BLAST of Spo24558.1 vs. NCBI nr
BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
BLAST of Spo24558.1 vs. TAIR (Arabidopsis)

BLAST of Spo24558.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902217262\|gb\|KNA17649.1\|	3.0e-78	100.	hypothetical protein SOVF_0780...	[more]
gi\|731341567\|ref\|XP_010681961.1\|	3.9e-33	55.4	PREDICTED: uclacyanin-2-like [...	[more]
gi\|645253256\|ref\|XP_008232494.1\|	5.5e-19	45.1	PREDICTED: uclacyanin-2-like [...	[more]
gi\|694395807\|ref\|XP_009373210.1\|	7.1e-19	44.3	PREDICTED: uclacyanin-3 [Pyrus...	[more]
gi\|697127476\|ref\|XP_009617784.1\|	2.7e-18	46.7	PREDICTED: uclacyanin-3-like [...	[more]

BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RFB0_SPIOL	2.1e-78	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C2K0_BETVU	2.7e-33	55.4	Uncharacterized protein OS=Bet...	[more]
M5X4F6_PRUPE	7.2e-18	42.2	Uncharacterized protein OS=Pru...	[more]
A0A0B0MZW4_GOSAR	1.2e-17	44.5	Blue copper OS=Gossypium arbor...	[more]
F4YAW2_GOSHI	1.2e-17	44.5	Copper binding protein 3 OS=Go...	[more]

BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
BCP_PEA	1.4e-14	40.0	Blue copper protein OS=Pisum s...	[more]
BCB3_ARATH	1.8e-14	43.8	Uclacyanin-3 OS=Arabidopsis th...	[more]
BCB1_ARATH	1.4e-11	36.4	Blue copper protein OS=Arabido...	[more]
BABL_ARATH	7.2e-11	36.9	Basic blue protein OS=Arabidop...	[more]
BABL_LILLO	1.0e-9	40.4	Chemocyanin OS=Lilium longiflo...	[more]

BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G72230.1	2.7e-16	39.4	Cupredoxin superfamily protein	[more]
AT3G60280.1	1.0e-15	43.8	uclacyanin 3	[more]
AT1G22480.1	6.6e-15	38.8	Cupredoxin superfamily protein	[more]
AT3G60270.1	4.8e-13	38.8	Cupredoxin superfamily protein	[more]
AT5G20230.1	8.1e-13	36.4	blue-copper-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 48..109 score: 7.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 27..105 score: 5.0
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 20..113 score: 26
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 26..117 score: 1.4
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 26..111 score: 1.37
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 1..143 score: 3.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031410	cytoplasmic vesicle
molecular_function	GO:0009055	electron transfer activity