Spo23188.1 (mRNA) | SpinachBase

Overview


Name	Spo23188.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Pentatricopeptide repeat-containing protein, putative
Location	chr3 : 66986768 .. 66988390 (+)
Sequence length	1623

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCTCTCGCATTTTGCCTCGTCGATTAATCACATTCTCAAAGCTCATTTCTTCATCTTCATCACCTCAATTCCCAAATTTCATCACTCCACTTAAAAACCCAGATTTTTCAGCTGCCATTCATCTAGGAATTCCGAAACCAGAATTGTTTTACAGGTCAATTCATGGGTCTTCTATGAATACCCAAGTTGCGTCGAAAGCAAAAGCGAAAACAGAGGAAGAAAACCATTCGCCAGAATTAGCTCATCAAATTAGCAAAGATTCTGAGAAAATCTGCAAAATGCTGTTAAATTTACCTAAAGATTCAAGCATTGAATCAACCCTAGAAAGTTGCGGAGTAGAAGAAATCACACCCATGTTAGCTTTAGAGGTTTTGAAGAAGCTAAGTAACGCAGGTGTTCTTGCTCTTGGTTTTTTCAGGTGGGCAGAAAAGCAAAAGGGGTTTAAATACACAAATGAGGGTTACAATGCGTTGATTGATTCTTTAGGTAAGATTAGACAGTTTAAGATGATTTGGGTGTTGGTCGATTCAATGAAAAATAAAGGGGTTTTGACAAAATACACATTTAATTTGATTATTAGGAGATATGCTAGGGCTAAGAAGGTTGACGAAGCAGTCGCCGCATTTGAGAGGATGGAACAGTTCGGAATGACGGTTGATTCCTCGGATTTTAATCAATTCCTTAATACGTTGTGCAAATCTCGACAAGTTAACACTGCACACCAGGTGTTTGATAAAATGAAAAAGACAAGGTTTGTGCCGGATAAGAAATCCTACACCATACTGTTGGAAGGATGGGGTGAACAGCAGAATTTACTGAAACTTGATGAAGTTTATAGGGAAATGATAGAGGAAGGGTTTGAGCCGGATGTTGTGGCGTATGGAATTATCATGAATGCATACTGTAAAGCAAGGAAAGTTAGTGAAGCAGTGGAGAAATTAAGGGAAATGGAAGCAAAGGGCATTGAGCCTAGTCAACATATCTTTTGTATTTTGATCAATGGTTTAGGATCGAATAAGAGACTCGATGAAGCTTTGAAGTATTTCGAGATGTCTAAGGTTGGTGGTGCTGTTAGTGAAGCACCCACTTATAACGCAGTGGTTGGTTCATATTGTTGGTCATTGAGGTTTGATGATGCATTCCGGATGGTTGATAAAATGAGGAGATGTGGGGTTGGTCCAAATTCAAGAACTTATGGCATAATTATTCATCATATGATAAAGGCTGGAAAAGACAAAGAAGCTTATTCAGTGTTTATGAGAATGAACAATGATAAAGATTGTGATCCTACAGCAAGCACATATGAAATTGTATTAAGAATGTTCTGCAACAAAGGTGAAGTAGATAAGGCAATGAAGGTTTGGAAAGAGATGAAGGCCAAGGGGGTTCTTCCGGGTATGCATATGTTTGCTACAATGATAAACAGTTTCAGGCATGCTAAGAAATTGGAAGGCGCGTGCAAGTTTTTTGAAGAAATGATGGATCTTGGCATTAGGCCTCCTGCTTTGGTTTTCGACCAACTCAAACAGGCTTTACTTGACGAGGGTAAGAAAGATGCTGCTCTAAGTTTGACTCAGAAGCTTAATGCAATAAGGTTCACCCCAATTGTTGGCTGA

mRNA sequence

ATGGCGTTCTCTCGCATTTTGCCTCGTCGATTAATCACATTCTCAAAGCTCATTTCTTCATCTTCATCACCTCAATTCCCAAATTTCATCACTCCACTTAAAAACCCAGATTTTTCAGCTGCCATTCATCTAGGAATTCCGAAACCAGAATTGTTTTACAGGTCAATTCATGGGTCTTCTATGAATACCCAAGTTGCGTCGAAAGCAAAAGCGAAAACAGAGGAAGAAAACCATTCGCCAGAATTAGCTCATCAAATTAGCAAAGATTCTGAGAAAATCTGCAAAATGCTGTTAAATTTACCTAAAGATTCAAGCATTGAATCAACCCTAGAAAGTTGCGGAGTAGAAGAAATCACACCCATGTTAGCTTTAGAGGTTTTGAAGAAGCTAAGTAACGCAGGTGTTCTTGCTCTTGGTTTTTTCAGGTGGGCAGAAAAGCAAAAGGGGTTTAAATACACAAATGAGGGTTACAATGCGTTGATTGATTCTTTAGGTAAGATTAGACAGTTTAAGATGATTTGGGTGTTGGTCGATTCAATGAAAAATAAAGGGGTTTTGACAAAATACACATTTAATTTGATTATTAGGAGATATGCTAGGGCTAAGAAGGTTGACGAAGCAGTCGCCGCATTTGAGAGGATGGAACAGTTCGGAATGACGGTTGATTCCTCGGATTTTAATCAATTCCTTAATACGTTGTGCAAATCTCGACAAGTTAACACTGCACACCAGGTGTTTGATAAAATGAAAAAGACAAGGTTTGTGCCGGATAAGAAATCCTACACCATACTGTTGGAAGGATGGGGTGAACAGCAGAATTTACTGAAACTTGATGAAGTTTATAGGGAAATGATAGAGGAAGGGTTTGAGCCGGATGTTGTGGCGTATGGAATTATCATGAATGCATACTGTAAAGCAAGGAAAGTTAGTGAAGCAGTGGAGAAATTAAGGGAAATGGAAGCAAAGGGCATTGAGCCTAGTCAACATATCTTTTGTATTTTGATCAATGGTTTAGGATCGAATAAGAGACTCGATGAAGCTTTGAAGTATTTCGAGATGTCTAAGGTTGGTGGTGCTGTTAGTGAAGCACCCACTTATAACGCAGTGGTTGGTTCATATTGTTGGTCATTGAGGTTTGATGATGCATTCCGGATGGTTGATAAAATGAGGAGATGTGGGGTTGGTCCAAATTCAAGAACTTATGGCATAATTATTCATCATATGATAAAGGCTGGAAAAGACAAAGAAGCTTATTCAGTGTTTATGAGAATGAACAATGATAAAGATTGTGATCCTACAGCAAGCACATATGAAATTGTATTAAGAATGTTCTGCAACAAAGGTGAAGTAGATAAGGCAATGAAGGTTTGGAAAGAGATGAAGGCCAAGGGGGTTCTTCCGGGTATGCATATGTTTGCTACAATGATAAACAGTTTCAGGCATGCTAAGAAATTGGAAGGCGCGTGCAAGTTTTTTGAAGAAATGATGGATCTTGGCATTAGGCCTCCTGCTTTGGTTTTCGACCAACTCAAACAGGCTTTACTTGACGAGGGTAAGAAAGATGCTGCTCTAAGTTTGACTCAGAAGCTTAATGCAATAAGGTTCACCCCAATTGTTGGCTGA

Coding sequence (CDS)

ATGGCGTTCTCTCGCATTTTGCCTCGTCGATTAATCACATTCTCAAAGCTCATTTCTTCATCTTCATCACCTCAATTCCCAAATTTCATCACTCCACTTAAAAACCCAGATTTTTCAGCTGCCATTCATCTAGGAATTCCGAAACCAGAATTGTTTTACAGGTCAATTCATGGGTCTTCTATGAATACCCAAGTTGCGTCGAAAGCAAAAGCGAAAACAGAGGAAGAAAACCATTCGCCAGAATTAGCTCATCAAATTAGCAAAGATTCTGAGAAAATCTGCAAAATGCTGTTAAATTTACCTAAAGATTCAAGCATTGAATCAACCCTAGAAAGTTGCGGAGTAGAAGAAATCACACCCATGTTAGCTTTAGAGGTTTTGAAGAAGCTAAGTAACGCAGGTGTTCTTGCTCTTGGTTTTTTCAGGTGGGCAGAAAAGCAAAAGGGGTTTAAATACACAAATGAGGGTTACAATGCGTTGATTGATTCTTTAGGTAAGATTAGACAGTTTAAGATGATTTGGGTGTTGGTCGATTCAATGAAAAATAAAGGGGTTTTGACAAAATACACATTTAATTTGATTATTAGGAGATATGCTAGGGCTAAGAAGGTTGACGAAGCAGTCGCCGCATTTGAGAGGATGGAACAGTTCGGAATGACGGTTGATTCCTCGGATTTTAATCAATTCCTTAATACGTTGTGCAAATCTCGACAAGTTAACACTGCACACCAGGTGTTTGATAAAATGAAAAAGACAAGGTTTGTGCCGGATAAGAAATCCTACACCATACTGTTGGAAGGATGGGGTGAACAGCAGAATTTACTGAAACTTGATGAAGTTTATAGGGAAATGATAGAGGAAGGGTTTGAGCCGGATGTTGTGGCGTATGGAATTATCATGAATGCATACTGTAAAGCAAGGAAAGTTAGTGAAGCAGTGGAGAAATTAAGGGAAATGGAAGCAAAGGGCATTGAGCCTAGTCAACATATCTTTTGTATTTTGATCAATGGTTTAGGATCGAATAAGAGACTCGATGAAGCTTTGAAGTATTTCGAGATGTCTAAGGTTGGTGGTGCTGTTAGTGAAGCACCCACTTATAACGCAGTGGTTGGTTCATATTGTTGGTCATTGAGGTTTGATGATGCATTCCGGATGGTTGATAAAATGAGGAGATGTGGGGTTGGTCCAAATTCAAGAACTTATGGCATAATTATTCATCATATGATAAAGGCTGGAAAAGACAAAGAAGCTTATTCAGTGTTTATGAGAATGAACAATGATAAAGATTGTGATCCTACAGCAAGCACATATGAAATTGTATTAAGAATGTTCTGCAACAAAGGTGAAGTAGATAAGGCAATGAAGGTTTGGAAAGAGATGAAGGCCAAGGGGGTTCTTCCGGGTATGCATATGTTTGCTACAATGATAAACAGTTTCAGGCATGCTAAGAAATTGGAAGGCGCGTGCAAGTTTTTTGAAGAAATGATGGATCTTGGCATTAGGCCTCCTGCTTTGGTTTTCGACCAACTCAAACAGGCTTTACTTGACGAGGGTAAGAAAGATGCTGCTCTAAGTTTGACTCAGAAGCTTAATGCAATAAGGTTCACCCCAATTGTTGGCTGA

Protein sequence

MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSIHGSSMNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITPMLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSMKNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAVSEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFRHAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIVG

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo23188	Spo23188	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo23188.1	Spo23188.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23188.1.exon.1	Spo23188.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23188.1.CDS.1	Spo23188.1.CDS.1	CDS

Homology

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BLAST of Spo23188.1 vs. NCBI nr
Match: gi|902208469|gb|KNA15957.1| (hypothetical protein SOVF_093560 [Spinacia oleracea])

HSP 1 Score: 1076.2 bits (2782), Expect = 0.000e+0
Identity = 538/540 (99.63%), Postives = 540/540 (100.00%), Query Frame = 1

		  
Query: 1   MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSIHGSS 60
           MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSIHGSS
Sbjct: 1   MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSIHGSS 60

Query: 61  MNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITP 120
           MNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITP
Sbjct: 61  MNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITP 120

Query: 121 MLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSM 180
           MLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSM
Sbjct: 121 MLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSM 180

Query: 181 KNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVN 240
           KNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVN
Sbjct: 181 KNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVN 240

Query: 241 TAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIM 300
           TAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIM
Sbjct: 241 TAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIM 300

Query: 301 NAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAV 360
           NAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAV
Sbjct: 301 NAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAV 360

Query: 361 SEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSV 420
           SEAPTYNAVVGSYCWSLRFDDAFRMVD+MRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSV
Sbjct: 361 SEAPTYNAVVGSYCWSLRFDDAFRMVDEMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSV 420

Query: 421 FMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFR 480
           FMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINS+R
Sbjct: 421 FMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSYR 480

Query: 481 HAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIVG 540
           HAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIVG
Sbjct: 481 HAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIVG 540

[Close]

BLAST of Spo23188.1 vs. NCBI nr
Match: gi|731340995|ref|XP_010681691.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 780.8 bits (2015), Expect = 1.600e-222
Identity = 393/547 (71.85%), Postives = 455/547 (83.18%), Query Frame = 1

		  
Query: 1   MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPD----FS-----AAIHLGIPKPEL 60
           M FSRI+ R+ +  SKL SSS S    N  TPLK  D    FS       +H  I   + 
Sbjct: 1   MGFSRIVTRQFMKLSKLNSSSFSHS-QNLTTPLKISDLWSIFSPTATYTCLHQEIRIQKP 60

Query: 61  FYRSIHGSSMNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLE 120
           FY  IHGSSMNTQ+ +       EE+  P++ +QI+KDSEKICK+LL LPK+SSIESTLE
Sbjct: 61  FYCLIHGSSMNTQLIT-----ITEESSLPKITNQINKDSEKICKLLLALPKNSSIESTLE 120

Query: 121 SCGVEEITPMLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFK 180
             G+EEITP+L LEVLKKLSNAGVLALGFFRWAE QKGFKYT + YNALIDSLGKI+QFK
Sbjct: 121 RSGIEEITPILVLEVLKKLSNAGVLALGFFRWAENQKGFKYTTDSYNALIDSLGKIKQFK 180

Query: 181 MIWVLVDSMKNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLN 240
           MIWVL+DSMK KG+LTKYTF L+IRRYARA+KV +AV  FE+MEQFGMT D SDFN+FL+
Sbjct: 181 MIWVLIDSMKIKGILTKYTFTLVIRRYARARKVVDAVKTFEKMEQFGMTRDLSDFNRFLD 240

Query: 241 TLCKSRQVNTAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEP 300
           T+CKSRQV +AHQVFD+MKK +FVPD+KSYTILLEGWG+QQNLLKL+EVYREM +EGFEP
Sbjct: 241 TMCKSRQVKSAHQVFDEMKKRKFVPDQKSYTILLEGWGQQQNLLKLEEVYREMKDEGFEP 300

Query: 301 DVVAYGIIMNAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYF 360
           DVVAYGIIMNAYCKA KV++AVEK REMEAKG+EPS HIFCILINGLGS+KRL EALK+F
Sbjct: 301 DVVAYGIIMNAYCKAGKVTQAVEKFREMEAKGVEPSPHIFCILINGLGSDKRLGEALKFF 360

Query: 361 EMSKVGGAVSEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKA 420
           EMSK  G   EAPTYNAVVGSYCW +RFDDAF+++D+M++C VGPNSRTY II+HH+IKA
Sbjct: 361 EMSKANGVKPEAPTYNAVVGSYCWLMRFDDAFQILDEMKKCKVGPNSRTYDIILHHLIKA 420

Query: 421 GKDKEAYSVFMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHM 480
           GK +EAYSVFMRMNND+ CDP  STY I++RMFC KGE+D A+KVW +MK KG+LPGMHM
Sbjct: 421 GKYEEAYSVFMRMNNDQGCDPIESTYTIIIRMFCGKGELDMAVKVWNQMKGKGILPGMHM 480

Query: 481 FATMINSFRHAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLN 539
           FAT+INSFRHA KLE ACKFFEEM+D GIRPPA VF  LKQALL++GKKDAAL L +KL+
Sbjct: 481 FATLINSFRHANKLEDACKFFEEMLDFGIRPPAPVFSNLKQALLNDGKKDAALVLVRKLD 540

[Close]

BLAST of Spo23188.1 vs. NCBI nr
Match: gi|870856536|gb|KMT08163.1| (hypothetical protein BVRB_6g142860 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 750.4 bits (1936), Expect = 2.200e-213
Identity = 363/478 (75.94%), Postives = 420/478 (87.87%), Query Frame = 1

		  
Query: 61  MNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITP 120
           MNTQ+ +       EE+  P++ +QI+KDSEKICK+LL LPK+SSIESTLE  G+EEITP
Sbjct: 1   MNTQLIT-----ITEESSLPKITNQINKDSEKICKLLLALPKNSSIESTLERSGIEEITP 60

Query: 121 MLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSM 180
           +L LEVLKKLSNAGVLALGFFRWAE QKGFKYT + YNALIDSLGKI+QFKMIWVL+DSM
Sbjct: 61  ILVLEVLKKLSNAGVLALGFFRWAENQKGFKYTTDSYNALIDSLGKIKQFKMIWVLIDSM 120

Query: 181 KNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVN 240
           K KG+LTKYTF L+IRRYARA+KV +AV  FE+MEQFGMT D SDFN+FL+T+CKSRQV 
Sbjct: 121 KIKGILTKYTFTLVIRRYARARKVVDAVKTFEKMEQFGMTRDLSDFNRFLDTMCKSRQVK 180

Query: 241 TAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIM 300
           +AHQVFD+MKK +FVPD+KSYTILLEGWG+QQNLLKL+EVYREM +EGFEPDVVAYGIIM
Sbjct: 181 SAHQVFDEMKKRKFVPDQKSYTILLEGWGQQQNLLKLEEVYREMKDEGFEPDVVAYGIIM 240

Query: 301 NAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAV 360
           NAYCKA KV++AVEK REMEAKG+EPS HIFCILINGLGS+KRL EALK+FEMSK  G  
Sbjct: 241 NAYCKAGKVTQAVEKFREMEAKGVEPSPHIFCILINGLGSDKRLGEALKFFEMSKANGVK 300

Query: 361 SEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSV 420
            EAPTYNAVVGSYCW +RFDDAF+++D+M++C VGPNSRTY II+HH+IKAGK +EAYSV
Sbjct: 301 PEAPTYNAVVGSYCWLMRFDDAFQILDEMKKCKVGPNSRTYDIILHHLIKAGKYEEAYSV 360

Query: 421 FMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFR 480
           FMRMNND+ CDP  STY I++RMFC KGE+D A+KVW +MK KG+LPGMHMFAT+INSFR
Sbjct: 361 FMRMNNDQGCDPIESTYTIIIRMFCGKGELDMAVKVWNQMKGKGILPGMHMFATLINSFR 420

Query: 481 HAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPI 539
           HA KLE ACKFFEEM+D GIRPPA VF  LKQALL++GKKDAAL L +KL+AIR TPI
Sbjct: 421 HANKLEDACKFFEEMLDFGIRPPAPVFSNLKQALLNDGKKDAALVLVRKLDAIRLTPI 473

[Close]

BLAST of Spo23188.1 vs. NCBI nr
Match: gi|657993866|ref|XP_008389228.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like [Malus domestica])

HSP 1 Score: 618.6 bits (1594), Expect = 1.000e-173
Identity = 310/549 (56.47%), Postives = 398/549 (72.50%), Query Frame = 1

		  
Query: 1   MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPD---------FSAAIHLGIPKPEL 60
           M  SRI P        L+S  S     N   P +NP          F  AIH G+ KP++
Sbjct: 1   MGLSRIFP--------LVSKLSKNFIRNRTLPTENPSGFLCNRTASFHRAIHDGLEKPQV 60

Query: 61  FYRSIHGSSMNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLE 120
               +H +   T +    K               +S+D+EKICK+L     +S IES L+
Sbjct: 61  ----LHDAGDKTPLLKNPK---------------VSEDAEKICKILSTSSSNSPIESFLD 120

Query: 121 SCGVEEITPMLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFK 180
              VE  +P L +EVLKKLSNAGVLAL FFRWAEKQKGFK+T E YNALI++LGKI+QFK
Sbjct: 121 GASVEA-SPTLVVEVLKKLSNAGVLALSFFRWAEKQKGFKHTTESYNALIEALGKIKQFK 180

Query: 181 MIWVLVDSMKNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLN 240
           M+W LV+ MK KG+L+K TF LI RRYAR KKV EA+ AFE+M +FGM V+ SDFN+ ++
Sbjct: 181 MMWELVNEMKIKGMLSKETFALISRRYARVKKVKEAIDAFEKMAKFGMKVEGSDFNRLID 240

Query: 241 TLCKSRQVNTAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEP 300
           TL KSRQV  A +VFDKMKK RF PD KSYTILLEGWG++QN L+L+EVYREM +EGF+ 
Sbjct: 241 TLSKSRQVERAQEVFDKMKKRRFEPDIKSYTILLEGWGQEQNFLRLNEVYREMKDEGFDA 300

Query: 301 DVVAYGIIMNAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYF 360
           DVV Y I++NA+CKA+K  EA++  REMEAK I+ + HIFCILINGLGS KRL EAL++F
Sbjct: 301 DVVTYAILINAHCKAKKYDEAIDLFREMEAKNIKATPHIFCILINGLGSEKRLSEALEFF 360

Query: 361 EMSKVGGAVSEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKA 420
           E++K  G   EAPTYNA+VGSYCWS+R  DAFR+VD+MR+CG+GPN+RTY II+HH++KA
Sbjct: 361 ELNKASGFKPEAPTYNALVGSYCWSMRMQDAFRVVDEMRKCGIGPNARTYDIILHHLVKA 420

Query: 421 GKDKEAYSVFMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHM 480
            + ++AYS+F +M+ D  C+PT STYEI++RMFCN+  +D A++VW +MK +GVLPGMHM
Sbjct: 421 RRTEQAYSIFQQMSRDPGCEPTVSTYEIMVRMFCNEERMDMALQVWDQMKTRGVLPGMHM 480

Query: 481 FATMINSFRHAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLN 540
           FAT+INS  H  KL+ ACK+F+EM+D GIRPPA +F  LKQ+LLD G+KD  +SL  K++
Sbjct: 481 FATLINSLCHGNKLDDACKYFQEMLDAGIRPPAQLFSNLKQSLLDGGRKDVVISLGLKID 521

[Close]

BLAST of Spo23188.1 vs. NCBI nr
Match: gi|694330949|ref|XP_009356158.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 618.2 bits (1593), Expect = 1.300e-173
Identity = 310/541 (57.30%), Postives = 399/541 (73.75%), Query Frame = 1

		  
Query: 1   MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSIHGSS 60
           M  SRI P        L+S  S     N   P +NP           +   F+R+IH   
Sbjct: 1   MGLSRIFP--------LVSKLSKNFIRNRTLPTENPSGFLC-----NRTASFHRAIHDGL 60

Query: 61  MNTQVASKAKAKTEEENHSPELAH-QISKDSEKICKMLLNLPKDSSIESTLESCGVEEIT 120
               V   A  KT      P L + ++S+D+EKICK+L     +S IES L+   VE  +
Sbjct: 61  EKPLVIDDAGDKT------PLLKNPEVSEDAEKICKILSTRSSNSPIESFLDGASVEA-S 120

Query: 121 PMLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDS 180
           P L +EVLKKLSN+GVLAL FFRWAEKQKGFK++ E YNALI++LGKI+QFKM+W LV+ 
Sbjct: 121 PTLVVEVLKKLSNSGVLALSFFRWAEKQKGFKHSTESYNALIEALGKIKQFKMMWELVNE 180

Query: 181 MKNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQV 240
           MK KG+L+K TF LI RRYARAKKV EA+ AFE+M +FGM V+ SDFN+ ++TL KSRQV
Sbjct: 181 MKIKGMLSKETFALISRRYARAKKVKEAIDAFEKMAKFGMKVEGSDFNRLIDTLSKSRQV 240

Query: 241 NTAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGII 300
             A +VFDKMKK RF PD KSYTILLEGWG++QN L+L+EVYREM +EGF+PDVV Y I+
Sbjct: 241 ERAQEVFDKMKKRRFEPDIKSYTILLEGWGQEQNFLRLNEVYREMKDEGFDPDVVTYAIL 300

Query: 301 MNAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGA 360
           +NA+CKA+K  EA++  REMEAK I+ + HIFCILINGLGS KRL EAL++FE++K  G 
Sbjct: 301 INAHCKAKKYDEAIDLFREMEAKNIKATPHIFCILINGLGSEKRLSEALEFFELNKASGF 360

Query: 361 VSEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYS 420
           + EAPTYNA+VGSYCWS+R  D FR+VD+MR+CG+GPN+RTY II+HH++KA + ++AYS
Sbjct: 361 IPEAPTYNALVGSYCWSMRMQDTFRVVDEMRKCGIGPNARTYDIILHHLVKARRTEQAYS 420

Query: 421 VFMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSF 480
           +F +M+ +  C+PT STYEI++RMFCN+  VD AM+VW +MK +GVLPGMHMF+T+INS 
Sbjct: 421 IFQQMSREPGCEPTVSTYEIMVRMFCNEERVDMAMQVWDQMKTRGVLPGMHMFSTLINSL 480

Query: 481 RHAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIV 540
            H  KL+ ACK+F+EM+D GIRPPA +F  LKQALLD G+KD  +SL  K++ +R TP+V
Sbjct: 481 CHGNKLDDACKYFQEMLDAGIRPPAQLFSNLKQALLDGGRKDVVISLGLKIDRLRKTPLV 521

[Close]

BLAST of Spo23188.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAY5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093560 PE=4 SV=1)

HSP 1 Score: 1076.2 bits (2782), Expect = 0.000e+0
Identity = 538/540 (99.63%), Postives = 540/540 (100.00%), Query Frame = 1

		  
Query: 1   MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSIHGSS 60
           MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSIHGSS
Sbjct: 1   MAFSRILPRRLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSIHGSS 60

Query: 61  MNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITP 120
           MNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITP
Sbjct: 61  MNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITP 120

Query: 121 MLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSM 180
           MLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSM
Sbjct: 121 MLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSM 180

Query: 181 KNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVN 240
           KNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVN
Sbjct: 181 KNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVN 240

Query: 241 TAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIM 300
           TAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIM
Sbjct: 241 TAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIM 300

Query: 301 NAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAV 360
           NAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAV
Sbjct: 301 NAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAV 360

Query: 361 SEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSV 420
           SEAPTYNAVVGSYCWSLRFDDAFRMVD+MRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSV
Sbjct: 361 SEAPTYNAVVGSYCWSLRFDDAFRMVDEMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSV 420

Query: 421 FMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFR 480
           FMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINS+R
Sbjct: 421 FMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSYR 480

Query: 481 HAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIVG 540
           HAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIVG
Sbjct: 481 HAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIVG 540

[Close]

BLAST of Spo23188.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C829_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g142860 PE=4 SV=1)

HSP 1 Score: 750.4 bits (1936), Expect = 1.600e-213
Identity = 363/478 (75.94%), Postives = 420/478 (87.87%), Query Frame = 1

		  
Query: 61  MNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITP 120
           MNTQ+ +       EE+  P++ +QI+KDSEKICK+LL LPK+SSIESTLE  G+EEITP
Sbjct: 1   MNTQLIT-----ITEESSLPKITNQINKDSEKICKLLLALPKNSSIESTLERSGIEEITP 60

Query: 121 MLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSM 180
           +L LEVLKKLSNAGVLALGFFRWAE QKGFKYT + YNALIDSLGKI+QFKMIWVL+DSM
Sbjct: 61  ILVLEVLKKLSNAGVLALGFFRWAENQKGFKYTTDSYNALIDSLGKIKQFKMIWVLIDSM 120

Query: 181 KNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVN 240
           K KG+LTKYTF L+IRRYARA+KV +AV  FE+MEQFGMT D SDFN+FL+T+CKSRQV 
Sbjct: 121 KIKGILTKYTFTLVIRRYARARKVVDAVKTFEKMEQFGMTRDLSDFNRFLDTMCKSRQVK 180

Query: 241 TAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIM 300
           +AHQVFD+MKK +FVPD+KSYTILLEGWG+QQNLLKL+EVYREM +EGFEPDVVAYGIIM
Sbjct: 181 SAHQVFDEMKKRKFVPDQKSYTILLEGWGQQQNLLKLEEVYREMKDEGFEPDVVAYGIIM 240

Query: 301 NAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAV 360
           NAYCKA KV++AVEK REMEAKG+EPS HIFCILINGLGS+KRL EALK+FEMSK  G  
Sbjct: 241 NAYCKAGKVTQAVEKFREMEAKGVEPSPHIFCILINGLGSDKRLGEALKFFEMSKANGVK 300

Query: 361 SEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSV 420
            EAPTYNAVVGSYCW +RFDDAF+++D+M++C VGPNSRTY II+HH+IKAGK +EAYSV
Sbjct: 301 PEAPTYNAVVGSYCWLMRFDDAFQILDEMKKCKVGPNSRTYDIILHHLIKAGKYEEAYSV 360

Query: 421 FMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFR 480
           FMRMNND+ CDP  STY I++RMFC KGE+D A+KVW +MK KG+LPGMHMFAT+INSFR
Sbjct: 361 FMRMNNDQGCDPIESTYTIIIRMFCGKGELDMAVKVWNQMKGKGILPGMHMFATLINSFR 420

Query: 481 HAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPI 539
           HA KLE ACKFFEEM+D GIRPPA VF  LKQALL++GKKDAAL L +KL+AIR TPI
Sbjct: 421 HANKLEDACKFFEEMLDFGIRPPAPVFSNLKQALLNDGKKDAALVLVRKLDAIRLTPI 473

[Close]

BLAST of Spo23188.1 vs. UniProtKB/TrEMBL
Match: F6HFJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04690 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 1.600e-170
Identity = 309/538 (57.43%), Postives = 390/538 (72.49%), Query Frame = 1

		  
Query: 10  RLITFSKLISSSSSPQFPNFITPLKNPDFSAAIHLGIPK-------PELFYRSIHGSSMN 69
           R + FS  I  +S+P   +F   L + DF     +           P  F RSIHG S+ 
Sbjct: 5   RFLKFSPKILKTSNPFTISFHLLLADADFVRLESIKHENENSCGFSPFSFCRSIHGGSIR 64

Query: 70  TQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITPML 129
            Q  ++    T          H I++D+ K+CK+L     +SSIES L    V+ ++P L
Sbjct: 65  NQACTETTDATN---------HHIAQDTGKLCKLLCT-HSNSSIESLLNGASVD-VSPTL 124

Query: 130 ALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSMKN 189
            LEVLKKLSN+GV+AL FFRWAEKQKGFKY+ E YNALI++LGKI+QFKMIW LV+ M++
Sbjct: 125 VLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRS 184

Query: 190 KGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTA 249
           KG+LT+ TF LI RRYARA+KV EAV  FE+ME+FG+    SDFN+ L+ LCKSR V  A
Sbjct: 185 KGLLTQETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERA 244

Query: 250 HQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNA 309
            +VFDKMK  +F PD KSYTILLEGWG++QNLL+LDEVYREM +EGFEPD V YGI++NA
Sbjct: 245 QEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINA 304

Query: 310 YCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAVSE 369
           +CKAR+   AVE   +MEA    P+ HI+C LINGLGS +RL EAL++FE SK  G   E
Sbjct: 305 HCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPE 364

Query: 370 APTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFM 429
           APTYNAVVGSYC S+R DDA+R+VD+MR+CGVGP +RTY II+HH+IKA + KEAY VF 
Sbjct: 365 APTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQ 424

Query: 430 RMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFRHA 489
            M+++  C+P+ STYEIV+RMFCN+  VD A++VW EMKAKGVLPGMHMF+T+INS  + 
Sbjct: 425 GMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYE 484

Query: 490 KKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPIVG 541
            KL+ ACK+F EM+D+GIRPPA +F  LKQ LLDEGK+D  L L QKL+ IR T ++G
Sbjct: 485 NKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDKIRTTQVIG 531

[Close]

BLAST of Spo23188.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KUY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571490 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 9.000e-169
Identity = 295/488 (60.45%), Postives = 375/488 (76.84%), Query Frame = 1

		  
Query: 53  YRSIHGSSMNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLES 112
           +RS H    +++   KA  K+  E+       +I++D+EK CK++   P +S IES L+ 
Sbjct: 63  HRSTHHRIEHSKQDLKASQKSIVESD------EIAQDAEKFCKLISKNP-NSCIESLLDG 122

Query: 113 CGVEEITPMLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKM 172
             +E ++P L +EVLKKLSNAG LAL FFRWAEKQKGFK+T E YN LI++LGKI+QF +
Sbjct: 123 APME-LSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNV 182

Query: 173 IWVLVDSMKNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNT 232
           IW LV  MK KG+L++ TF LI RRYARA+KV EAV +FE+ME+FG  +  SDFN+ L+T
Sbjct: 183 IWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDT 242

Query: 233 LCKSRQVNTAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPD 292
           LCKSR V  A +VFDKMK  RF PD KSYTILLEGWG+ QNLLKL+EVYREM +EGFEPD
Sbjct: 243 LCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPD 302

Query: 293 VVAYGIIMNAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFE 352
           VV +GI++NA+CKARK  EA+    EMEAK I+PS H+FC LINGLGS KRL EAL++FE
Sbjct: 303 VVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFE 362

Query: 353 MSKVGGAVSEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAG 412
             K+ G   EAPTYNAVVG+YCWS++   A+RMVD+MR+ GVGPNSRTY II+HH+IK  
Sbjct: 363 QLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGR 422

Query: 413 KDKEAYSVFMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMF 472
           K KEAYSVF RM+ +  C+PT STY+I++RMFCN+  VD A+++W EMKAKGVLPGMH+F
Sbjct: 423 KSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLF 482

Query: 473 ATMINSFRHAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNA 532
           +T+INS  H  KLE AC +F+EM+D+GIRPPA +F  LKQALLD+G+KD AL + +K+  
Sbjct: 483 STLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKK 542

Query: 533 IRFTPIVG 541
           +R  P+VG
Sbjct: 543 LRKAPLVG 542

[Close]

BLAST of Spo23188.1 vs. UniProtKB/TrEMBL
Match: A0A061E7F9_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_010824 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 7.600e-168
Identity = 294/490 (60.00%), Postives = 377/490 (76.94%), Query Frame = 1

		  
Query: 51  LFYRSIHGSSMNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTL 110
           + YRSIH   M  ++  +   K   E        ++ +D+ KICK LL+   D  ++  L
Sbjct: 62  MIYRSIHEDLMPKKLPFEPYEKKPAEP-------KLEEDAAKICK-LLSSRSDIHVDKLL 121

Query: 111 ESCGVEEITPMLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQF 170
           E+  +E ++P L  EVLK+LSNAGV+A+ FF WAEKQKGFKY  E YNALI++LGKI+QF
Sbjct: 122 ENASIE-VSPSLVAEVLKRLSNAGVIAMSFFTWAEKQKGFKYNTESYNALIEALGKIKQF 181

Query: 171 KMIWVLVDSMKNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFL 230
           K+IW L++ MK+  +L+K TF LI RRYARA+KV+EA+ AFERME+FG  +D+SDFN+ +
Sbjct: 182 KLIWNLLNDMKSSKLLSKDTFALISRRYARARKVEEAIEAFERMEEFGFKLDTSDFNRLI 241

Query: 231 NTLCKSRQVNTAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFE 290
           +TL KSR V  A++VFDKMKK RFVPD KSYTILLEGWG++ NLL+LDEVYREM +EGFE
Sbjct: 242 DTLSKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYREMKDEGFE 301

Query: 291 PDVVAYGIIMNAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKY 350
           PDVV YGI++NAYCKA+K + AVE   EMEAK  +PS H+FC LINGLGS KRL EAL++
Sbjct: 302 PDVVTYGILINAYCKAKKYNRAVELFHEMEAKNCKPSPHVFCTLINGLGSEKRLSEALEF 361

Query: 351 FEMSKVGGAVSEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIK 410
           FE SK  G   EAPTYN++VG+YCWS++ DDAFR++ +MRR  VGPNSRTY II+HH+IK
Sbjct: 362 FERSKSCGFAPEAPTYNSLVGAYCWSMQMDDAFRVIGEMRRNLVGPNSRTYDIILHHLIK 421

Query: 411 AGKDKEAYSVFMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMH 470
           A + KEAY VF +M ++  C PT STYEI++RMFCN+ +VD AM VW +MKA+GVLPGMH
Sbjct: 422 ARRMKEAYLVFQKMTSEPGCVPTVSTYEIIVRMFCNEEQVDMAMLVWAQMKAEGVLPGMH 481

Query: 471 MFATMINSFRHAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKL 530
           MF+ +INS  H  KL+ ACK+F+EM+D GIRPPA +F  LKQALLDEGKKD AL+L +K+
Sbjct: 482 MFSDLINSLCHNSKLDDACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKKDTALNLARKI 541

Query: 531 NAIRFTPIVG 541
           + +R  P+VG
Sbjct: 542 DKLRKMPLVG 542

[Close]

BLAST of Spo23188.1 vs. ExPASy Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 3.400e-161
Identity = 296/544 (54.41%), Postives = 380/544 (69.85%), Query Frame = 1

		  
Query: 1   MAFSRILPRRLITFSKL----ISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSI 60
           M FSR      +  S+     ISSSSSP   +     K  +F+             Y S 
Sbjct: 1   MVFSRFFRVTGVNLSRRVYSRISSSSSPSLESIPWIHKASNFT------------LYGSF 60

Query: 61  HGSSMNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVE 120
           H SS+ TQV+                A+  S+D+E+ICK+L     DS +E+ L    V+
Sbjct: 61  HASSVETQVS----------------ANDASQDAERICKILTKFT-DSKVETLLNEASVK 120

Query: 121 EITPMLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVL 180
            ++P L  EVLKKLSNAGVLAL  F+WAE QKGFK+T   YNALI+SLGKI+QFK+IW L
Sbjct: 121 -LSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 180

Query: 181 VDSMKNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKS 240
           VD MK K +L+K TF LI RRYARA+KV EA+ AF +ME+FG  ++SSDFN+ L+TL KS
Sbjct: 181 VDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS 240

Query: 241 RQVNTAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAY 300
           R V  A +VFDKMKK RF PD KSYTILLEGWG++ NLL++DEV REM +EGFEPDVVAY
Sbjct: 241 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 300

Query: 301 GIIMNAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKV 360
           GII+NA+CKA+K  EA+    EME +  +PS HIFC LINGLGS K+L++AL++FE SK 
Sbjct: 301 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 360

Query: 361 GGAVSEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKE 420
            G   EAPTYNA+VG+YCWS R +DA++ VD+MR  GVGPN+RTY II+HH+I+  + KE
Sbjct: 361 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 420

Query: 421 AYSVFMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMI 480
           AY V+  M+    C+PT STYEI++RMFCNK  +D A+K+W EMK KGVLPGMHMF+++I
Sbjct: 421 AYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 480

Query: 481 NSFRHAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFT 540
            +  H  KL+ AC++F EM+D+GIRPP  +F +LKQ LLDEG+KD    L  K++ +R T
Sbjct: 481 TALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKT 510

[Close]

BLAST of Spo23188.1 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 359.0 bits (920), Expect = 9.100e-98
Identity = 175/460 (38.04%), Postives = 297/460 (64.57%), Query Frame = 1

		  
Query: 79  SPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITPMLALEVLKKLSNAGVLAL 138
           S E    ++  ++ I K+L++ P+   ++S L+  G+  ++  +  +VL +  NAG+L  
Sbjct: 61  SSEQVRDVADVAKNISKVLMSSPQ-LVLDSALDQSGLR-VSQEVVEDVLNRFRNAGLLTY 120

Query: 139 GFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSMKNKGVLTKYTFNLIIRRY 198
            FF+W+EKQ+ ++++   Y+ +I+S  KIRQ+K++W L+++M+ K +L   TF +++R+Y
Sbjct: 121 RFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKY 180

Query: 199 ARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKMKKTRFVPDK 258
           ARA+KVDEA+ AF  ME++ +  +   FN  L+ LCKS+ V  A +VF+ M+  RF PD 
Sbjct: 181 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDS 240

Query: 259 KSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKVSEAVEKLRE 318
           K+Y+ILLEGWG++ NL K  EV+REMI+ G  PD+V Y I+++  CKA +V EA+  +R 
Sbjct: 241 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS 300

Query: 319 MEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAVSEAPTYNAVVGSYCWSLR 378
           M+    +P+  I+ +L++  G+  RL+EA+  F   +  G  ++   +N+++G++C + R
Sbjct: 301 MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 360

Query: 379 FDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDKDCDPTASTYE 438
             + +R++ +M+  GV PNS++  II+ H+I+ G+  EA+ VF +M   K C+P A TY 
Sbjct: 361 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM--IKVCEPDADTYT 420

Query: 439 IVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFRHAKKLEGACKFFEEMMDL 498
           +V++MFC K E++ A KVWK M+ KGV P MH F+ +IN     +  + AC   EEM+++
Sbjct: 421 MVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEM 480

Query: 499 GIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPI 539
           GIRP  + F +L+Q L+ E ++D    L +K+N +   P+
Sbjct: 481 GIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEPL 515

[Close]

BLAST of Spo23188.1 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.100e-62
Identity = 141/432 (32.64%), Postives = 238/432 (55.09%), Query Frame = 1

		  
Query: 76  ENHSPELAHQISKDSEKICKMLLN----LPKDSSIESTLESCGVEEITPMLALEVLKKLS 135
           E H  E A ++    EKI ++L N    +PK   +E  L   G++ + P L + VL +  
Sbjct: 57  EKHEDEFAGEV----EKIYRILRNHHSRVPK---LELALNESGID-LRPGLIIRVLSRCG 116

Query: 136 NAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSMK--NKGVLTKY 195
           +AG L   FF WA KQ G+ ++ E   +++  L K+RQF  +W L++ M+  N  ++   
Sbjct: 117 DAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPE 176

Query: 196 TFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKM 255
            F +++RR+A A  V +AV   + M ++G+  D   F   L+ LCK+  V  A +VF+ M
Sbjct: 177 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 236

Query: 256 KKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKV 315
           ++ +F P+ + +T LL GW  +  L++  EV  +M E G EPD+V +  +++ Y  A K+
Sbjct: 237 RE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 296

Query: 316 SEAVEKLREMEAKGIEPSQHIFCILINGL-GSNKRLDEALKYFEMSKVGGAVSEAPTYNA 375
           ++A + + +M  +G EP+ + + +LI  L  + KR+DEA++ F   +  G  ++  TY A
Sbjct: 297 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 356

Query: 376 VVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDK 435
           ++  +C     D  + ++D MR+ GV P+  TY  I+    K  + +E   +  +M   +
Sbjct: 357 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR-R 416

Query: 436 DCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFRHAKKLEGA 495
            C P    Y +V+R+ C  GEV +A+++W EM+A G+ PG+  F  MIN F     L  A
Sbjct: 417 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 476

Query: 496 CKFFEEMMDLGI 501
           C  F+EM+  GI
Sbjct: 477 CNHFKEMVSRGI 478

[Close]

BLAST of Spo23188.1 vs. ExPASy Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.900e-56
Identity = 115/443 (25.96%), Postives = 242/443 (54.63%), Query Frame = 1

		  
Query: 88  KDSEKICKMLLNL-PKDSSIESTLESCGVEEITPMLALEVLKKLSNAGVLALGFFRWAEK 147
           ++ E++CK++  L   D ++E+ L+   ++ ++  L +EVL++  +A   A  FF WA +
Sbjct: 129 EEVERVCKVIDELFALDRNMEAVLDEMKLD-LSHDLIVEVLERFRHARKPAFRFFCWAAE 188

Query: 148 QKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSMKNKGVLTKYTFNLIIRRYARAKKVDE 207
           ++GF + +  YN+++  L K RQF+ +  +++ M  KG+LT  TF + ++ +A AK+  +
Sbjct: 189 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 248

Query: 208 AVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKMKKTRFVPDKKSYTILLE 267
           AV  FE M+++   +     N  L++L +++    A  +FDK+K+ RF P+  +YT+LL 
Sbjct: 249 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLN 308

Query: 268 GWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKVSEAVEKLREMEAKGIEP 327
           GW   +NL++   ++ +MI++G +PD+VA+ +++    ++RK S+A++    M++KG  P
Sbjct: 309 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 368

Query: 328 SQHIFCILINGLGSNKRLDEALKYFEMSKVGGAVSEAPTYNAVVGSYCWSLRFDDAFRMV 387
           +   + I+I        ++ A++YF+     G   +A  Y  ++  +    + D  + ++
Sbjct: 369 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 428

Query: 388 DKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDKDCDPTASTYEIVLRMFCN 447
            +M+  G  P+ +TY  +I  M      + A  ++ +M  + + +P+  T+ ++++ +  
Sbjct: 429 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN-EIEPSIHTFNMIMKSYFM 488

Query: 448 KGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFRHAKKLEGACKFFEEMMDLGIRPPALV 507
               +    VW+EM  KG+ P  + +  +I       K   AC++ EEM+D G++ P + 
Sbjct: 489 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 548

Query: 508 FDQLKQALLDEGKKDAALSLTQK 530
           +++        G+ +    L Q+
Sbjct: 549 YNKFAADFHRGGQPEIFEELAQR 568

[Close]

BLAST of Spo23188.1 vs. ExPASy Swiss-Prot
Match: PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.600e-56
Identity = 138/455 (30.33%), Postives = 234/455 (51.43%), Query Frame = 1

		  
Query: 79  SPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITPMLALEVLKKLSNAGVLAL 138
           SP+L ++IS+    +     N PKD  +E TL +     ++  L  +VLK+  N G  A 
Sbjct: 34  SPDLVNEISR----VLSDHRN-PKDD-LEHTLVAYS-PRVSSNLVEQVLKRCKNLGFPAH 93

Query: 139 GFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIW-VLVDSMK-NKGVLTKYTFNLIIR 198
            FF WA +   F ++ E Y+ L++ LG  +QF ++W  L+++ + N   ++   F ++ R
Sbjct: 94  RFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFR 153

Query: 199 RYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKMKKTRFVP 258
            Y+RA    EA  AF RM +FG+     D +Q L++LC  + VN A + F K K    VP
Sbjct: 154 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 213

Query: 259 DKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKVSEAVEKL 318
             K+Y+IL+ GW   ++     +V+ EM+E     D++AY  +++A CK+  V    +  
Sbjct: 214 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 273

Query: 319 REMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAVSEAPTYNAVVGSYCWS 378
           +EM   G++P  + F I I+       +  A K  +  K    V    T+N ++ + C +
Sbjct: 274 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 333

Query: 379 LRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDKDCDPTAST 438
            + DDA+ ++D+M + G  P++ TY  I+ +     +   A  +  RM+  K C P   T
Sbjct: 334 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK-CLPDRHT 393

Query: 439 YEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSF-RHAKKLEGACKFFEEM 498
           Y +VL++    G  D+A ++W+ M  +   P +  +  MI+   R   KLE AC++FE M
Sbjct: 394 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 453

Query: 499 MDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKL 531
           +D GI P +   + L+  L+  G+ D    L  K+
Sbjct: 454 IDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480

[Close]

BLAST of Spo23188.1 vs. TAIR (Arabidopsis)
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 569.7 bits (1467), Expect = 1.900e-162
Identity = 296/544 (54.41%), Postives = 380/544 (69.85%), Query Frame = 1

		  
Query: 1   MAFSRILPRRLITFSKL----ISSSSSPQFPNFITPLKNPDFSAAIHLGIPKPELFYRSI 60
           M FSR      +  S+     ISSSSSP   +     K  +F+             Y S 
Sbjct: 1   MVFSRFFRVTGVNLSRRVYSRISSSSSPSLESIPWIHKASNFT------------LYGSF 60

Query: 61  HGSSMNTQVASKAKAKTEEENHSPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVE 120
           H SS+ TQV+                A+  S+D+E+ICK+L     DS +E+ L    V+
Sbjct: 61  HASSVETQVS----------------ANDASQDAERICKILTKFT-DSKVETLLNEASVK 120

Query: 121 EITPMLALEVLKKLSNAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVL 180
            ++P L  EVLKKLSNAGVLAL  F+WAE QKGFK+T   YNALI+SLGKI+QFK+IW L
Sbjct: 121 -LSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 180

Query: 181 VDSMKNKGVLTKYTFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKS 240
           VD MK K +L+K TF LI RRYARA+KV EA+ AF +ME+FG  ++SSDFN+ L+TL KS
Sbjct: 181 VDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS 240

Query: 241 RQVNTAHQVFDKMKKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAY 300
           R V  A +VFDKMKK RF PD KSYTILLEGWG++ NLL++DEV REM +EGFEPDVVAY
Sbjct: 241 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 300

Query: 301 GIIMNAYCKARKVSEAVEKLREMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKV 360
           GII+NA+CKA+K  EA+    EME +  +PS HIFC LINGLGS K+L++AL++FE SK 
Sbjct: 301 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 360

Query: 361 GGAVSEAPTYNAVVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKE 420
            G   EAPTYNA+VG+YCWS R +DA++ VD+MR  GVGPN+RTY II+HH+I+  + KE
Sbjct: 361 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 420

Query: 421 AYSVFMRMNNDKDCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMI 480
           AY V+  M+    C+PT STYEI++RMFCNK  +D A+K+W EMK KGVLPGMHMF+++I
Sbjct: 421 AYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 480

Query: 481 NSFRHAKKLEGACKFFEEMMDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFT 540
            +  H  KL+ AC++F EM+D+GIRPP  +F +LKQ LLDEG+KD    L  K++ +R T
Sbjct: 481 TALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKT 510

[Close]

BLAST of Spo23188.1 vs. TAIR (Arabidopsis)
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 359.0 bits (920), Expect = 5.100e-99
Identity = 175/460 (38.04%), Postives = 297/460 (64.57%), Query Frame = 1

		  
Query: 79  SPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITPMLALEVLKKLSNAGVLAL 138
           S E    ++  ++ I K+L++ P+   ++S L+  G+  ++  +  +VL +  NAG+L  
Sbjct: 61  SSEQVRDVADVAKNISKVLMSSPQ-LVLDSALDQSGLR-VSQEVVEDVLNRFRNAGLLTY 120

Query: 139 GFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSMKNKGVLTKYTFNLIIRRY 198
            FF+W+EKQ+ ++++   Y+ +I+S  KIRQ+K++W L+++M+ K +L   TF +++R+Y
Sbjct: 121 RFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKY 180

Query: 199 ARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKMKKTRFVPDK 258
           ARA+KVDEA+ AF  ME++ +  +   FN  L+ LCKS+ V  A +VF+ M+  RF PD 
Sbjct: 181 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDS 240

Query: 259 KSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKVSEAVEKLRE 318
           K+Y+ILLEGWG++ NL K  EV+REMI+ G  PD+V Y I+++  CKA +V EA+  +R 
Sbjct: 241 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS 300

Query: 319 MEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAVSEAPTYNAVVGSYCWSLR 378
           M+    +P+  I+ +L++  G+  RL+EA+  F   +  G  ++   +N+++G++C + R
Sbjct: 301 MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 360

Query: 379 FDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDKDCDPTASTYE 438
             + +R++ +M+  GV PNS++  II+ H+I+ G+  EA+ VF +M   K C+P A TY 
Sbjct: 361 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM--IKVCEPDADTYT 420

Query: 439 IVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFRHAKKLEGACKFFEEMMDL 498
           +V++MFC K E++ A KVWK M+ KGV P MH F+ +IN     +  + AC   EEM+++
Sbjct: 421 MVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEM 480

Query: 499 GIRPPALVFDQLKQALLDEGKKDAALSLTQKLNAIRFTPI 539
           GIRP  + F +L+Q L+ E ++D    L +K+N +   P+
Sbjct: 481 GIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEPL 515

[Close]

BLAST of Spo23188.1 vs. TAIR (Arabidopsis)
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 241.5 bits (615), Expect = 1.200e-63
Identity = 141/432 (32.64%), Postives = 238/432 (55.09%), Query Frame = 1

		  
Query: 76  ENHSPELAHQISKDSEKICKMLLN----LPKDSSIESTLESCGVEEITPMLALEVLKKLS 135
           E H  E A ++    EKI ++L N    +PK   +E  L   G++ + P L + VL +  
Sbjct: 57  EKHEDEFAGEV----EKIYRILRNHHSRVPK---LELALNESGID-LRPGLIIRVLSRCG 116

Query: 136 NAGVLALGFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSMK--NKGVLTKY 195
           +AG L   FF WA KQ G+ ++ E   +++  L K+RQF  +W L++ M+  N  ++   
Sbjct: 117 DAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPE 176

Query: 196 TFNLIIRRYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKM 255
            F +++RR+A A  V +AV   + M ++G+  D   F   L+ LCK+  V  A +VF+ M
Sbjct: 177 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 236

Query: 256 KKTRFVPDKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKV 315
           ++ +F P+ + +T LL GW  +  L++  EV  +M E G EPD+V +  +++ Y  A K+
Sbjct: 237 RE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 296

Query: 316 SEAVEKLREMEAKGIEPSQHIFCILINGL-GSNKRLDEALKYFEMSKVGGAVSEAPTYNA 375
           ++A + + +M  +G EP+ + + +LI  L  + KR+DEA++ F   +  G  ++  TY A
Sbjct: 297 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 356

Query: 376 VVGSYCWSLRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDK 435
           ++  +C     D  + ++D MR+ GV P+  TY  I+    K  + +E   +  +M   +
Sbjct: 357 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR-R 416

Query: 436 DCDPTASTYEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFRHAKKLEGA 495
            C P    Y +V+R+ C  GEV +A+++W EM+A G+ PG+  F  MIN F     L  A
Sbjct: 417 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 476

Query: 496 CKFFEEMMDLGI 501
           C  F+EM+  GI
Sbjct: 477 CNHFKEMVSRGI 478

[Close]

BLAST of Spo23188.1 vs. TAIR (Arabidopsis)
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 220.7 bits (561), Expect = 2.200e-57
Identity = 115/443 (25.96%), Postives = 242/443 (54.63%), Query Frame = 1

		  
Query: 88  KDSEKICKMLLNL-PKDSSIESTLESCGVEEITPMLALEVLKKLSNAGVLALGFFRWAEK 147
           ++ E++CK++  L   D ++E+ L+   ++ ++  L +EVL++  +A   A  FF WA +
Sbjct: 129 EEVERVCKVIDELFALDRNMEAVLDEMKLD-LSHDLIVEVLERFRHARKPAFRFFCWAAE 188

Query: 148 QKGFKYTNEGYNALIDSLGKIRQFKMIWVLVDSMKNKGVLTKYTFNLIIRRYARAKKVDE 207
           ++GF + +  YN+++  L K RQF+ +  +++ M  KG+LT  TF + ++ +A AK+  +
Sbjct: 189 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 248

Query: 208 AVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKMKKTRFVPDKKSYTILLE 267
           AV  FE M+++   +     N  L++L +++    A  +FDK+K+ RF P+  +YT+LL 
Sbjct: 249 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLN 308

Query: 268 GWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKVSEAVEKLREMEAKGIEP 327
           GW   +NL++   ++ +MI++G +PD+VA+ +++    ++RK S+A++    M++KG  P
Sbjct: 309 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 368

Query: 328 SQHIFCILINGLGSNKRLDEALKYFEMSKVGGAVSEAPTYNAVVGSYCWSLRFDDAFRMV 387
           +   + I+I        ++ A++YF+     G   +A  Y  ++  +    + D  + ++
Sbjct: 369 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 428

Query: 388 DKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDKDCDPTASTYEIVLRMFCN 447
            +M+  G  P+ +TY  +I  M      + A  ++ +M  + + +P+  T+ ++++ +  
Sbjct: 429 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN-EIEPSIHTFNMIMKSYFM 488

Query: 448 KGEVDKAMKVWKEMKAKGVLPGMHMFATMINSFRHAKKLEGACKFFEEMMDLGIRPPALV 507
               +    VW+EM  KG+ P  + +  +I       K   AC++ EEM+D G++ P + 
Sbjct: 489 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 548

Query: 508 FDQLKQALLDEGKKDAALSLTQK 530
           +++        G+ +    L Q+
Sbjct: 549 YNKFAADFHRGGQPEIFEELAQR 568

[Close]

BLAST of Spo23188.1 vs. TAIR (Arabidopsis)
Match: AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 219.5 bits (558), Expect = 4.900e-57
Identity = 138/455 (30.33%), Postives = 234/455 (51.43%), Query Frame = 1

		  
Query: 79  SPELAHQISKDSEKICKMLLNLPKDSSIESTLESCGVEEITPMLALEVLKKLSNAGVLAL 138
           SP+L ++IS+    +     N PKD  +E TL +     ++  L  +VLK+  N G  A 
Sbjct: 34  SPDLVNEISR----VLSDHRN-PKDD-LEHTLVAYS-PRVSSNLVEQVLKRCKNLGFPAH 93

Query: 139 GFFRWAEKQKGFKYTNEGYNALIDSLGKIRQFKMIW-VLVDSMK-NKGVLTKYTFNLIIR 198
            FF WA +   F ++ E Y+ L++ LG  +QF ++W  L+++ + N   ++   F ++ R
Sbjct: 94  RFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFR 153

Query: 199 RYARAKKVDEAVAAFERMEQFGMTVDSSDFNQFLNTLCKSRQVNTAHQVFDKMKKTRFVP 258
            Y+RA    EA  AF RM +FG+     D +Q L++LC  + VN A + F K K    VP
Sbjct: 154 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 213

Query: 259 DKKSYTILLEGWGEQQNLLKLDEVYREMIEEGFEPDVVAYGIIMNAYCKARKVSEAVEKL 318
             K+Y+IL+ GW   ++     +V+ EM+E     D++AY  +++A CK+  V    +  
Sbjct: 214 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 273

Query: 319 REMEAKGIEPSQHIFCILINGLGSNKRLDEALKYFEMSKVGGAVSEAPTYNAVVGSYCWS 378
           +EM   G++P  + F I I+       +  A K  +  K    V    T+N ++ + C +
Sbjct: 274 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 333

Query: 379 LRFDDAFRMVDKMRRCGVGPNSRTYGIIIHHMIKAGKDKEAYSVFMRMNNDKDCDPTAST 438
            + DDA+ ++D+M + G  P++ TY  I+ +     +   A  +  RM+  K C P   T
Sbjct: 334 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK-CLPDRHT 393

Query: 439 YEIVLRMFCNKGEVDKAMKVWKEMKAKGVLPGMHMFATMINSF-RHAKKLEGACKFFEEM 498
           Y +VL++    G  D+A ++W+ M  +   P +  +  MI+   R   KLE AC++FE M
Sbjct: 394 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 453

Query: 499 MDLGIRPPALVFDQLKQALLDEGKKDAALSLTQKL 531
           +D GI P +   + L+  L+  G+ D    L  K+
Sbjct: 454 IDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480

The following BLAST results are available for this feature:

BLAST of Spo23188.1 vs. NCBI nr
BLAST of Spo23188.1 vs. UniProtKB/TrEMBL
BLAST of Spo23188.1 vs. ExPASy Swiss-Prot
BLAST of Spo23188.1 vs. TAIR (Arabidopsis)

BLAST of Spo23188.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902208469\|gb\|KNA15957.1\|	0.0e+0	99.6	hypothetical protein SOVF_0935...	[more]
gi\|731340995\|ref\|XP_010681691.1\|	1.6e-222	71.8	PREDICTED: pentatricopeptide r...	[more]
gi\|870856536\|gb\|KMT08163.1\|	2.2e-213	75.9	hypothetical protein BVRB_6g14...	[more]
gi\|657993866\|ref\|XP_008389228.1\|	1.0e-173	56.4	PREDICTED: pentatricopeptide r...	[more]
gi\|694330949\|ref\|XP_009356158.1\|	1.3e-173	57.3	PREDICTED: pentatricopeptide r...	[more]

BLAST of Spo23188.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RAY5_SPIOL	0.0e+0	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8C829_BETVU	1.6e-213	75.9	Uncharacterized protein OS=Bet...	[more]
F6HFJ5_VITVI	1.6e-170	57.4	Putative uncharacterized prote...	[more]
A0A0A0KUY5_CUCSA	9.0e-169	60.4	Uncharacterized protein OS=Cuc...	[more]
A0A061E7F9_THECC	7.6e-168	60.0	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo23188.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
PP112_ARATH	3.4e-161	54.4	Pentatricopeptide repeat-conta...	[more]
PP129_ARATH	9.1e-98	38.0	Pentatricopeptide repeat-conta...	[more]
PP275_ARATH	2.1e-62	32.6	Pentatricopeptide repeat-conta...	[more]
PP293_ARATH	3.9e-56	25.9	Pentatricopeptide repeat-conta...	[more]
PPR78_ARATH	8.6e-56	30.3	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo23188.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT1G71060.1	1.9e-162	54.4	Tetratricopeptide repeat (TPR)...	[more]
AT1G77360.1	5.1e-99	38.0	Tetratricopeptide repeat (TPR)...	[more]
AT3G49730.1	1.2e-63	32.6	Tetratricopeptide repeat (TPR)...	[more]
AT3G62470.1	2.2e-57	25.9	Pentatricopeptide repeat (PPR)...	[more]
AT1G52640.1	4.9e-57	30.3	Pentatricopeptide repeat (PPR)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 472..500 score: 0.0014coord: 157..185 score: 0.025coord: 189..218 score: 2.
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 428..461 score: 3.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 365..408 score: 8.0E-10coord: 226..267 score: 4.5E-9coord: 291..338 score: 1.5
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 330..353 score: 6.7E-4coord: 365..397 score: 2.4E-5coord: 436..467 score: 2.0E-8coord: 157..185 score: 0.0012coord: 189..222 score: 1.4E-6coord: 226..257 score: 2.0E-6coord: 294..327 score: 2.3E-8coord: 471..502 score: 2.4E-6coord: 260..293 score: 3.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 503..537 score: 5.481coord: 153..183 score: 6.851coord: 362..396 score: 10.928coord: 327..361 score: 7.728coord: 222..256 score: 10.643coord: 292..326 score: 12.858coord: 468..502 score: 10.117coord: 433..467 score: 12.66coord: 187..221 score: 10.764coord: 397..432 score: 8.133coord: 257..291 score: 10
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 198..354 score: 7.
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 42..535 score: 1.3E
None	No IPR available	PANTHER	PTHR24015:SF261	SUBFAMILY NOT NAMED	coord: 42..535 score: 1.3E
None	No IPR available	unknown	SSF81901	HCP-like	coord: 263..353 score: 4.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding