Spo24805.1 (mRNA)

Overview
NameSpo24805.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionOrigin recognition complex subunit 4
Locationchr3 : 91931115 .. 91934275 (-)
Sequence length396
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGAATCCCGGTGAAGAAGCCCTAGCTCTACTCAGAACCAGAATCTGCGACCCCAACGCCTTTTTTTCTCTCCTCCCCCCTTCTCCAGATACCAATTTTAGGTAATTCATTCTTCTCCTCAATCATCTTATGAATCTGTATTTATTTAATTGCTCATTTACTCTCAATTTCTTTCAGTTGATATAATTGAATGCAATCTGTATTTTCAATTTTGCAGTAAATTGAAATTTATAGTATCTAGCTCAATCACTGAGGCGTGCAATAATTCCGTCTTGCTTCTTGGTCCCCGTGGTTGTGGCAAAACCGCGGTCTGTACTTCATTCTCTTTCATGGGTATTAATTTGATTGTTGATTTACCTGTTCGCTGAATTTGATGATGTTTTTTTTTTGTTTGGGAGTAGGTTTTGGAGCTTGTTCTTAAAGATCTATTGGCTGAATATCCAGATATGATAACAGTGGTAATGTTCTACACCCAATTCCTATTAATATATGCAAAATTCATACTCGTATTATTGATTTTATGGTTGAAAAATCAATAATTAATTAATTTCATTATGTACTCCCTAATATGCTAATAATGATGATATATTGGTGAAAAGTTATAGGAAATAGGAGTGATGAGTGTTTGGTGCCTAACAGTTCAAACTTTTGATGGTTAAACATACAAGTCCGTTGTTGAACTATCAACTTTAAAAGATCTTTAATTTTACTTGGTTTCATTGTACTTCATGTACAAGGTTCATAGTTGAAGAAGTGTTGGGATAATCTCCCCAAATACCAAATAATTAAGTATTATTCTCATATAATGAAAAAGGAAATGAAAATTAATAATATGAATTTTGTAGTGGAGTGCTTTAGACATGGTCTAGATATTTCCATTGGTGGTAGACTTTTCTTGCCAAGACAAAACTCGAAGAAGGTGGGCCTAGGGTGTTCTTAACAGCCGTAGAAGCTTTTTTGTTCCTATTATCAACAAAGTCTACAACTTGTAGAAGTGTGTAGAAGCTTCAGAGGTTGGGTATTATGAAAGGGAGTTTTCTCAACCGGTAGGGTGAATGAAGGGTGTGTGCAAGAAGAAGTAGTCACACTAGAAGTCAGTGAGTGTGTGTTACCAATCGCGGGGGTGCACAAAATCAATAGTGTGAGGGACTACTTGGTTTATGAGGTAAACACAATATTAGTGTGAGGTGTAATTTTTAGGATTAGTGAAATTACCATGGGGTTCATTGTAGACTATCCTAAAAATACGTTGTATCTAATGCAATATTACTGTGAGGTGTAATTTTTAGGATTAGTGAAATTGCCATGGGTTCATTGTAGAGTGTAGATTATCCTAAGAATACGTTGTATCTAATATTGTAGTAGTTGTGGGATTTTAAATATTATGTTTACTTTAAATAAAGGAAACAAAACCATTCTCCTCTATTGTGTTTGGTTTATTAACTTTTTTTTTGTAGTGAACTCTCACCTCCTTCAATAAGTCCTTCCTCTCTTCACTGTCCAACCACAATTATCTTTACTCTTAAATCCTCCCTCTTCTCCTTGCTACCTTCCATGATCTTTTCTCCACCGACCTTTTAGATAATGTGTTTTCTGGTTAGGAGAGGGCTGGATTAAGACAATGTTTTTCGTTTGGAAGCAGTTTGGGTTGTGTTTGCAAGGAGGTGGTGGGTTGATGCCGGTGTTAGCCATTCTTGGTGAGGGTGAGTGGCTCTAATGGCGACTGGCGAAGATGTATGTTTGTTGAAGTCTATGAACAACACGGTGGGTGGGTTAGGATACTGAAGATGGACAGGGATGATGCGATGGTGCACCAGAGATAAGGGAACCTATGTTACTTGGACTCTTCATTTTACCTCAAGTACCCGTGTCGGATCCTCCACACTCGGACATGGGTATGGACACCGGATACTTCATTTTGGACCAAATTCATGTTTTTTTTTTCCCACAAAAGCCGAGTCAGACACTTTGACACGTACCCGTATCCGACATGGGTACCCGAATCCAAGTAACATAGAAGGGAACATATCTTTTGAAGAACCTATGGGAGGCTATGATCAACTTACATGAGGATTTCTTTTTCGCAGTTTATTACCTTTCCCTTCCCTAAGACCCCGTACCAAACAACCCCGACATCTGCTTTGTTGGGGTTTCACCATTGGTTTTTAGTTAGATGAAATATTAGTATTTTTTGGTTTATAGTTCTAGGGTATGTGTTATTCAGGCTTCAGACGGAGAATATTTTGGTTTCAAATTTTAGATACTTTATAGGGTAGAAAAAAGTTATGTGTATTGAGGTTGGGGTGGGATGGGTGTAGGACAGGGTGGTTTGAGATGGGATAGGGTTGGTGCTGAGGATTAGGTATGGCACATTACGTGTCCCTGCTTCATCACTTGTAGTTAAAAGTTTCCATACCCTTCTAACCATGAGGCCATTTCTATACTATCAAGGTAACTATCAAGGTGGCCGCAGGGTGGAATTGGAATCCTCAGATACTCTCATTGTCATCTCTTTATTTTATGTGAGATCAACATAAGTTTTTGCTGTTTTTATCCCCTGGTGGACCTTCTAGCTACTGGCGTACTGATATTTTTTTCTCTATCATACATATTTGAGTTTCTTTTAAGTAATAGTCTTTTGGAGCAATGATATAGTACACAAATTTAGGTTTTGATGTGCTTGTTTTTCAGCAATTTGCTTGTGATTTCAAAGTTTAATTTGGATAGTAGTTTTTGTTCAACTTTTGTGTTCACTACTTCACTGAGATGGAAGGTTTTTAAGTTAGGATTTCTGATATCCTCTCTTGAAAGAGTAGTTGTTAAATTTGATTGCTGAGTGTGAAAAAAGTAGTTGATTGATTAAAAAAAAACTTAAAAAGAAAGAAAAAGGATGTGAAGGGTTTAATAAAAATTGTGTCCTCTTTGGTTAGTTACTTGTTTGTCAGTTCCCCCTTCCTTTTCGTTGGTTGGTTATCTTGCTAAGTGTTAAAGTATCAGCTTTACATTTTTTGCAGATTAAATTGAATGGGCTTTTGCATAGTGATGATAATTGCGCCCTTAAGGTACGACTTAATATGCTGCATATTTTTCATGATCTTGTTAAGTTCAATGTTTGTGAATACCATGAGATTGAGTGTTCTACATCATCTTCCTAG

mRNA sequence

ATGGAAAAGAATCCCGGTGAAGAAGCCCTAGCTCTACTCAGAACCAGAATCTGCGACCCCAACGCCTTTTTTTCTCTCCTCCCCCCTTCTCCAGATACCAATTTTAGTAAATTGAAATTTATAGTATCTAGCTCAATCACTGAGGCGTGCAATAATTCCGTCTTGCTTCTTGGTCCCCGTGGTTGTGGCAAAACCGCGGTTTTGGAGCTTGTTCTTAAAGATCTATTGGCTGAATATCCAGATATGATAACAGTGATTAAATTGAATGGGCTTTTGCATAGTGATGATAATTGCGCCCTTAAGGTACGACTTAATATGCTGCATATTTTTCATGATCTTGTTAAGTTCAATGTTTGTGAATACCATGAGATTGAGTGTTCTACATCATCTTCCTAG

Coding sequence (CDS)

ATGGAAAAGAATCCCGGTGAAGAAGCCCTAGCTCTACTCAGAACCAGAATCTGCGACCCCAACGCCTTTTTTTCTCTCCTCCCCCCTTCTCCAGATACCAATTTTAGTAAATTGAAATTTATAGTATCTAGCTCAATCACTGAGGCGTGCAATAATTCCGTCTTGCTTCTTGGTCCCCGTGGTTGTGGCAAAACCGCGGTTTTGGAGCTTGTTCTTAAAGATCTATTGGCTGAATATCCAGATATGATAACAGTGATTAAATTGAATGGGCTTTTGCATAGTGATGATAATTGCGCCCTTAAGGTACGACTTAATATGCTGCATATTTTTCATGATCTTGTTAAGTTCAATGTTTGTGAATACCATGAGATTGAGTGTTCTACATCATCTTCCTAG

Protein sequence

MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRGCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLVKFNVCEYHEIECSTSSS
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo24805Spo24805gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo24805.1Spo24805.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24805.1.CDS.4Spo24805.1.CDS.4CDS
Spo24805.1.CDS.3Spo24805.1.CDS.3CDS
Spo24805.1.CDS.2Spo24805.1.CDS.2CDS
Spo24805.1.CDS.1Spo24805.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24805.1.exon.4Spo24805.1.exon.4exon
Spo24805.1.exon.3Spo24805.1.exon.3exon
Spo24805.1.exon.2Spo24805.1.exon.2exon
Spo24805.1.exon.1Spo24805.1.exon.1exon


Homology
[Close]
BLAST of Spo24805.1 vs. NCBI nr
Match: gi|902157557|gb|KNA06135.1| (hypothetical protein SOVF_183890 isoform B [Spinacia oleracea])

HSP 1 Score: 208.0 bits (528), Expect = 1.000e-50
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 1 

		  

Query: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60
           MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR
Sbjct: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60

Query: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
           GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALK     L + H L+
Sbjct: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKEIARQLCVEHQLL 114
[Close]
BLAST of Spo24805.1 vs. NCBI nr
Match: gi|902157556|gb|KNA06134.1| (hypothetical protein SOVF_183890 isoform A [Spinacia oleracea])

HSP 1 Score: 208.0 bits (528), Expect = 1.000e-50
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 1 

		  

Query: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60
           MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR
Sbjct: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60

Query: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
           GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALK     L + H L+
Sbjct: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKEIARQLCVEHQLL 114
[Close]
BLAST of Spo24805.1 vs. NCBI nr
Match: gi|731341029|ref|XP_010681709.1| (PREDICTED: origin recognition complex subunit 4 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 169.5 bits (428), Expect = 4.000e-39
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 1 

		  

Query: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60
           ME+ P EEAL LLR+R+CDP+A FSLL  S D+N+SKLKFI+SSSI EACNNSVLLLGPR
Sbjct: 1   MEETPAEEALILLRSRLCDPHAVFSLLSASSDSNYSKLKFIISSSIAEACNNSVLLLGPR 60

Query: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
           GCGKTAVL+LVL +LLAEYPDMI+VI+LNGLLHSDDNCALK     L   H L+
Sbjct: 61  GCGKTAVLQLVLNNLLAEYPDMISVIRLNGLLHSDDNCALKEIARQLCAEHQLL 114
[Close]
BLAST of Spo24805.1 vs. NCBI nr
Match: gi|731341027|ref|XP_010681707.1| (PREDICTED: origin recognition complex subunit 4 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 169.5 bits (428), Expect = 4.000e-39
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 1 

		  

Query: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60
           ME+ P EEAL LLR+R+CDP+A FSLL  S D+N+SKLKFI+SSSI EACNNSVLLLGPR
Sbjct: 1   MEETPAEEALILLRSRLCDPHAVFSLLSASSDSNYSKLKFIISSSIAEACNNSVLLLGPR 60

Query: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
           GCGKTAVL+LVL +LLAEYPDMI+VI+LNGLLHSDDNCALK     L   H L+
Sbjct: 61  GCGKTAVLQLVLNNLLAEYPDMISVIRLNGLLHSDDNCALKEIARQLCAEHQLL 114
[Close]
BLAST of Spo24805.1 vs. NCBI nr
Match: gi|661896128|emb|CDP00706.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 162.9 bits (411), Expect = 3.700e-37
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 1 

		  

Query: 3   KNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRGC 62
           KNP E+A+ LLR+R+C+PN  F+L   SPD+N+SKLK+I+SSS+TE+CNNSVLLLGPRGC
Sbjct: 4   KNPVEQAVILLRSRLCNPNFIFTLFSDSPDSNYSKLKYIISSSVTESCNNSVLLLGPRGC 63

Query: 63  GKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDL 114
           GK AVLELVL+DLL E+PDMI+VIKLNGLLHSDDNCALK     L + H L
Sbjct: 64  GKLAVLELVLEDLLREFPDMISVIKLNGLLHSDDNCALKEIARQLCLEHQL 114
[Close]
BLAST of Spo24805.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFU8_SPIOL (Origin recognition complex subunit 4 OS=Spinacia oleracea GN=SOVF_183890 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.000e-51
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 1 

		  

Query: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60
           MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR
Sbjct: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60

Query: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
           GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALK     L + H L+
Sbjct: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKEIARQLCVEHQLL 114
[Close]
BLAST of Spo24805.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFW8_SPIOL (Origin recognition complex subunit 4 OS=Spinacia oleracea GN=SOVF_183890 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.000e-51
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 1 

		  

Query: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60
           MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR
Sbjct: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60

Query: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
           GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALK     L + H L+
Sbjct: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKEIARQLCVEHQLL 114
[Close]
BLAST of Spo24805.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EY98_BETVU (Origin recognition complex subunit 4 OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g143040 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.800e-39
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 1 

		  

Query: 1   MEKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPR 60
           ME+ P EEAL LLR+R+CDP+A FSLL  S D+N+SKLKFI+SSSI EACNNSVLLLGPR
Sbjct: 1   MEETPAEEALILLRSRLCDPHAVFSLLSASSDSNYSKLKFIISSSIAEACNNSVLLLGPR 60

Query: 61  GCGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
           GCGKTAVL+LVL +LLAEYPDMI+VI+LNGLLHSDDNCALK     L   H L+
Sbjct: 61  GCGKTAVLQLVLNNLLAEYPDMISVIRLNGLLHSDDNCALKEIARQLCAEHQLL 114
[Close]
BLAST of Spo24805.1 vs. UniProtKB/TrEMBL
Match: A0A068TWX0_COFCA (Origin recognition complex subunit 4 OS=Coffea canephora GN=GSCOC_T00032757001 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.600e-37
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 1 

		  

Query: 3   KNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRGC 62
           KNP E+A+ LLR+R+C+PN  F+L   SPD+N+SKLK+I+SSS+TE+CNNSVLLLGPRGC
Sbjct: 4   KNPVEQAVILLRSRLCNPNFIFTLFSDSPDSNYSKLKYIISSSVTESCNNSVLLLGPRGC 63

Query: 63  GKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDL 114
           GK AVLELVL+DLL E+PDMI+VIKLNGLLHSDDNCALK     L + H L
Sbjct: 64  GKLAVLELVLEDLLREFPDMISVIKLNGLLHSDDNCALKEIARQLCLEHQL 114
[Close]
BLAST of Spo24805.1 vs. UniProtKB/TrEMBL
Match: F6HFL3_VITVI (Origin recognition complex subunit 4 OS=Vitis vinifera GN=VIT_01s0011g04400 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.900e-36
Identity = 76/112 (67.86%), Postives = 94/112 (83.93%), Query Frame = 1 

		  

Query: 3   KNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRGC 62
           +NP E+AL LLR+RIC+PN  F+    SPD+N+SKLKFI+SSS+TEACNNS+LLLGPRG 
Sbjct: 5   ENPAEDALILLRSRICNPNFVFTPFSDSPDSNYSKLKFIISSSVTEACNNSILLLGPRGS 64

Query: 63  GKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
           GKTAVLELV++DLLAE+ DMI+VI+LNGLLHSDDNCA+K     L + H L+
Sbjct: 65  GKTAVLELVIRDLLAEHADMISVIRLNGLLHSDDNCAVKEIARQLCVEHQLL 116
[Close]
BLAST of Spo24805.1 vs. ExPASy Swiss-Prot
Match: ORC4_ARATH (Origin of replication complex subunit 4 OS=Arabidopsis thaliana GN=ORC4 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.000e-31
Identity = 66/113 (58.41%), Postives = 86/113 (76.11%), Query Frame = 1 

		  

Query: 2   EKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRG 61
           ++ P E++L L+R R+CDP+  F  L  S D+N+SKLKFIVS+SITE CNNS+LLLGPRG
Sbjct: 3   KETPAEKSLNLIRGRLCDPSYVFRPLSASSDSNYSKLKFIVSTSITEGCNNSMLLLGPRG 62

Query: 62  CGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
            GK AVL+L + DLL ++PD ++VI+LNGLLHSDDNCA K     L + H L+
Sbjct: 63  SGKAAVLDLGVGDLLEQFPDSVSVIRLNGLLHSDDNCAFKEIAKQLCMEHHLL 115
[Close]
BLAST of Spo24805.1 vs. ExPASy Swiss-Prot
Match: ORC4_ORYSJ (Origin of replication complex subunit 4 OS=Oryza sativa subsp. japonica GN=ORC4 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.600e-16
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 1 

		  

Query: 8  EALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRGCGKTAV 67
          +A A+LR R+CD     S L  SPDTN+SKLK++V+SS++EACNNSVLLLGPRGCGK AV
Sbjct: 13 QAQAVLRGRLCDQAVVHSALRSSPDTNYSKLKYLVASSVSEACNNSVLLLGPRGCGKAAV 72
[Close]
BLAST of Spo24805.1 vs. ExPASy Swiss-Prot
Match: ORC4_PONAB (Origin recognition complex subunit 4 OS=Pongo abelii GN=ORC4 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.600e-6
Identity = 34/108 (31.48%), Postives = 56/108 (51.85%), Query Frame = 1 

		  

Query: 12  LLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRGCGKTAVLELV 71
           +LR R C  +   +L        +  L  ++  +     +NSVL++GPRG GKT ++   
Sbjct: 23  ILRERFCHQSPHSNLF--GVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHA 82

Query: 72  LKDL--LAEYPDMITVIKLNGLLHSDDNCALKV---RLNMLHIFHDLV 115
           LK+L  + E  + +  + LNGLL  +D  ALK    +LN+ ++  D V
Sbjct: 83  LKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENVVGDKV 128
[Close]
BLAST of Spo24805.1 vs. ExPASy Swiss-Prot
Match: ORC4_HUMAN (Origin recognition complex subunit 4 OS=Homo sapiens GN=ORC4 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 9.900e-6
Identity = 34/108 (31.48%), Postives = 56/108 (51.85%), Query Frame = 1 

		  

Query: 12  LLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRGCGKTAVLELV 71
           +LR R C  +   +L        +  L  ++  +     +NSVL++GPRG GKT ++   
Sbjct: 23  ILRERFCRQSPHSNLF--GVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHA 82

Query: 72  LKDL--LAEYPDMITVIKLNGLLHSDDNCALKV---RLNMLHIFHDLV 115
           LK+L  + E  + +  + LNGLL  +D  ALK    +LN+ ++  D V
Sbjct: 83  LKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENVVGDKV 128
[Close]
BLAST of Spo24805.1 vs. TAIR (Arabidopsis)
Match: AT2G01120.2 (origin recognition complex subunit 4)

HSP 1 Score: 132.9 bits (333), Expect = 1.500e-31
Identity = 65/113 (57.52%), Postives = 84/113 (74.34%), Query Frame = 1 

		  

Query: 2   EKNPGEEALALLRTRICDPNAFFSLLPPSPDTNFSKLKFIVSSSITEACNNSVLLLGPRG 61
           ++ P E++L L+R R+CDP+  F  L  S D+N+SKLKFIVS+SITE CNNS+LLLGPRG
Sbjct: 3   KETPAEKSLNLIRGRLCDPSYVFRPLSASSDSNYSKLKFIVSTSITEGCNNSMLLLGPRG 62

Query: 62  CGKTAVLELVLKDLLAEYPDMITVIKLNGLLHSDDNCALKVRLNMLHIFHDLV 115
            GK AVL+L    LL ++PD ++VI+LNGLLHSDDNCA K     L + H L+
Sbjct: 63  SGKAAVLDLXXGXLLEQFPDSVSVIRLNGLLHSDDNCAFKEIAKQLCMEHHLL 115
The following BLAST results are available for this feature:
BLAST of Spo24805.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902157557|gb|KNA06135.1|1.0e-5091.2hypothetical protein SOVF_1838... [more]
gi|902157556|gb|KNA06134.1|1.0e-5091.2hypothetical protein SOVF_1838... [more]
gi|731341029|ref|XP_010681709.1|4.0e-3973.6PREDICTED: origin recognition ... [more]
gi|731341027|ref|XP_010681707.1|4.0e-3973.6PREDICTED: origin recognition ... [more]
gi|661896128|emb|CDP00706.1|3.7e-3770.2unnamed protein product [Coffe... [more]
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BLAST of Spo24805.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QFU8_SPIOL7.0e-5191.2Origin recognition complex sub... [more]
A0A0K9QFW8_SPIOL7.0e-5191.2Origin recognition complex sub... [more]
A0A0J8EY98_BETVU2.8e-3973.6Origin recognition complex sub... [more]
A0A068TWX0_COFCA2.6e-3770.2Origin recognition complex sub... [more]
F6HFL3_VITVI4.9e-3667.8Origin recognition complex sub... [more]
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BLAST of Spo24805.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ORC4_ARATH4.0e-3158.4Origin of replication complex ... [more]
ORC4_ORYSJ3.6e-1666.6Origin of replication complex ... [more]
ORC4_PONAB7.6e-631.4Origin recognition complex sub... [more]
ORC4_HUMAN9.9e-631.4Origin recognition complex sub... [more]
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BLAST of Spo24805.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G01120.21.5e-3157.5origin recognition complex sub... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 42..78
score: 1.
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 45..75
score: 2.3
NoneNo IPR availablePANTHERPTHR12087ORIGIN RECOGNITION COMPLEX SUBUNIT 4coord: 7..101
score: 2.6

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
cellular_component GO:0000808 origin recognition complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding