Spo12022.1 (mRNA)

Overview
NameSpo12022.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description10 kDa chaperonin family protein
Locationchr4 : 8136504 .. 8139928 (-)
Sequence length1159
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTCCAGGACGGAGGGAGTAGTAACATTTTATAAACAAACCCAAAGTAAAAGGAAAGTGATTTATAGTAGGGTAGTTTAGTAAAAGTAGTAACCAAGAGCCATAAATCTCAGATAAACCCTAATTGAGCAAATGATATTTTGGAAGGTTCTAGTTGCTTTACTTCGATTCCAGCGAACACTAGTTACCCAAGTATTTAGCCACCACAACTAAAACCCTTGATTACAACTTCTACAAATCGTCAAAAACCCCTCATTTCTCTCTCCTCAATTTTTTCTGGGTATTTCGCAGAGTTTGAAAAGAGATGGCAAAGAGGCTAATTCCCACATTCAATCGCATTTTGATTGAGAAAATCACTGCTCCCACCAAAACAAATGCTGGAATCTTGCTTCCAGAATCTTCAAACAAGGTCCAATTAAACCCCCATTCTTTTCTTTTTAATCGAATTTAGCTGCTTTTTCGTTGATTTTTGTTTGTAAATTGATTCTTTTAACTCTATTGCAAATACCCACATCTTGTTTCAGCGATATTAGAGTAAATCTAATCTGGGGTTATTACATTTTTGCATAAATTTTGTTGCTTTTGATCTAATTCCTTTTGATATAGCTAGGTTAATTGCATTTTGGGTACATCTTTGTTCTAATCTGTCTGAAATTAATGCTGTTTATATTTTGGTTGTGAATGCCCAAATTGTTTTGATTAATCTTTAGTGTTAATTGAAAATTAAAAAGATAAGTTTTGCCTAAAAATGGTTAATTTGATGCAGCTGAACTCTGGGAAAGTGGTTGCTGTTGGTCCCGGAAGTCGTTCCAATGAAGGGAAACTAATCCCTGTTTGTGTGAAGGAGGGAGATACTGTTCTTTTGCCTGAATATGGTGGCTCTGAGTATAAGCTTGAAGATAAAACGTGAGTTCTGTTTTATGCTTTGTTATATGAGCTCTACTTTTAGTGCATTATTTGTGCATTGTTGAAGCTAGATTATGAGTAATTTTGTGTTAGTTTGTCGTAAATTTTGTCCTCGAATCTACTACGAGCTTTAGATTCTTGAAATCTGCTTTTGAATGGTGGTTAAACTGTATATTATGGCTGAGGCTTGGGAAATTCATACAGAGTATTGATTTATCATTGCTTGATTATTGACAAGATTGATGGTCGTTGAGGCTTATAGAAAAACCTAAATGCAGAAACATTTACTAGCAATTTGCTGCTTCTTTGTTTGAGCTGACACCATACGTGTAGATATTGATTTGTCATTGCGTGATCGTTGACATGATTGATAGTTGTTGATGCTTATATAAACCTAACTGCAGAAACATTTACTAGCAGTTTGCTGCTGCTTCGTTTGAGCTGACACCATACGTGTAGTAGTATTACTATTTACTAATATTACTCCCTCTGTCCCCCTTTTTATTGCTCCATAGCCAAAATTCAATATATTAGGCATTGATGTAAAATGTGCACATTGATTGATAAGGTGGACTGATTAAGAGAGAGATATAGAGATATAGAGCAAGTCATTAAGAGAGAGCAATCTCAATAGAATACCCCAAAGTGGAATATCTGCCAATCAAAGAGGGGCGGAGGGAGTAGTATGGTGTCCCGTGGTTCAAGGATATCGTTTATGATGGAGTTCTATACAAATTAATCACACCTTTGCTAGGGAAGTGTGCTAGAAGATTAGAAGTGATTTTTGCATTTTTATGTTTGTGGTGTCTATTTGGTAGCTGTATGGATGTTTGTGTTATTCAATTTCCCTTTCTGCGAGTCAAAAGGCTTCCTATCTTTACAATACATAGTATATGGGTGTATGAACTATACATGATCGTGTAGCTTTCTTCCATTTTCTTCCTCCCTAGGTCTATTTGCATTAGTTTGAGGATACGTAGTGAAATTTCTTTTGATATTGCTAAACCTTCCAATCTAGGTAGATAAAAGAGCTTTGGCGGTATTTCATATGGTTATGGAGGTATATGGATGATTGTGGTGGTAGTTATCCTTTTGTAATGCTTCAATGGATGCATTGGTATTATGATATGAATCTGATGTGGTATTGTGGTGATATGACTAGGATTAAGCCTAGCAGACTCCTTGTACGTCAAGTTTCTGCCATTATGTAACTTTTCAAACTCGAACAATGAGGTTAACTTTGAATCTTGACCATAGCCATTCAAATCCATATAATATTATTCCCTCCGTTCCTAAATAAGTGCCTTATTTCTATAAATAGCATTCCCTAATAAGTGTTTTATTTCTACTTTTGGACATACACTTTTCCCAAGTTTCCATACATTTTCCCACTTTTCCATAAATCATGATTGCTATTACACATTCTACAGTTTTCTCACTTTTCATCCCCACATCCACTTTTATTTGTACTTTATCAATAAACAATTATGTACTTTATTCTTTCCCCAAAAACACTCTCAACCATTGTTCTTCTTACACGTCTCTTATTTTTCTTCATCCTCGCACATTTATCCAAATAGGACACTTGTTTAGGAACTGAGGGAGTAGTATACCAAATGATTGTAGTGGTTGGGATATACAATTCCCGGGGATTGTTATTTCATTGCTTTATTTTGACCTGGATTGTCGAGCCTCATTATCTACCACTGTTTGTGGGTATAATTGTTCTGGTTTATTTGATGAATGCATTCCTCGAGCTTTGTTCATCATTACCTGATTTTGGTTGCCTCAATCACTAATTCAATAATACTTCTGAATTTCTTATTCCATGGTTGAGTATCATGCGCGTGAATATTAAGTCTCATTTTTCATGTTTGTAACTTTTGTTAGCTTCACTCCCCTCTTGCAGGTATCATCTGTACCGGGAAGACGACATTCTTGGAACTCTACATGACTGATTCTGATTCAGTAGCGGTTTTGTGGCACGCTTAATCCGATTTGTAGGAGTTCCCCTCTCTCCCAAACAATAAAAAAAAAAGTTACAAAAAAAGGAGTTCATGAGCTCAATTGACAAAGTTGAAAAGCTCTCCTTGAACAATATTTGAACCAAAAACGAGTCTTTGAATTGCAGAATTGAGGATTTTGTTCATGTTGTTATTGTTTTTCAATCACTTTGTTATGAAATTAGCATATATGGTTTCGTTTTCTCCTTTGTTTGTTGATCGTTGCATTATGTGTGAGAATTGAGATGTCACAGAGTTTTGTGAAGGTAATGGCTTCTGTAGTTCCATCTTCTATCGACTGTCGTTGGTTCTAGTAGCGGCCGTCACCCAAATAAATGTGTACGGAGAATGTTACAGCTTTAATTAGTACTTGTTGTTCCTTACACATTGAATCGTGTTGAGTAGGGCTGTCAAATCGGGTGATCGGATCACCGATTTGTTTCGTTGGACTATCTGGTCCACTAAAATAATTCTGTTGATTGGCTTAAACGATTTTTCGCTACCACTAAGCTCAAC

mRNA sequence

TATTCCAGGACGGAGGGAGTAGTAACATTTTATAAACAAACCCAAAGTAAAAGGAAAGTGATTTATAGTAGGGTAGTTTAGTAAAAGTAGTAACCAAGAGCCATAAATCTCAGATAAACCCTAATTGAGCAAATGATATTTTGGAAGGTTCTAGTTGCTTTACTTCGATTCCAGCGAACACTAGTTACCCAAGTATTTAGCCACCACAACTAAAACCCTTGATTACAACTTCTACAAATCGTCAAAAACCCCTCATTTCTCTCTCCTCAATTTTTTCTGGGTATTTCGCAGAGTTTGAAAAGAGATGGCAAAGAGGCTAATTCCCACATTCAATCGCATTTTGATTGAGAAAATCACTGCTCCCACCAAAACAAATGCTGGAATCTTGCTTCCAGAATCTTCAAACAAGCTGAACTCTGGGAAAGTGGTTGCTGTTGGTCCCGGAAGTCGTTCCAATGAAGGGAAACTAATCCCTGTTTGTGTGAAGGAGGGAGATACTGTTCTTTTGCCTGAATATGGTGGCTCTGAGTATAAGCTTGAAGATAAAACGTATCATCTGTACCGGGAAGACGACATTCTTGGAACTCTACATGACTGATTCTGATTCAGTAGCGGTTTTGTGGCACGCTTAATCCGATTTGTAGGAGTTCCCCTCTCTCCCAAACAATAAAAAAAAAAGTTACAAAAAAAGGAGTTCATGAGCTCAATTGACAAAGTTGAAAAGCTCTCCTTGAACAATATTTGAACCAAAAACGAGTCTTTGAATTGCAGAATTGAGGATTTTGTTCATGTTGTTATTGTTTTTCAATCACTTTGTTATGAAATTAGCATATATGGTTTCGTTTTCTCCTTTGTTTGTTGATCGTTGCATTATGTGTGAGAATTGAGATGTCACAGAGTTTTGTGAAGGTAATGGCTTCTGTAGTTCCATCTTCTATCGACTGTCGTTGGTTCTAGTAGCGGCCGTCACCCAAATAAATGTGTACGGAGAATGTTACAGCTTTAATTAGTACTTGTTGTTCCTTACACATTGAATCGTGTTGAGTAGGGCTGTCAAATCGGGTGATCGGATCACCGATTTGTTTCGTTGGACTATCTGGTCCACTAAAATAATTCTGTTGATTGGCTTAAACGATTTTTCGCTACCACTAAGCTCAAC

Coding sequence (CDS)

ATGGCAAAGAGGCTAATTCCCACATTCAATCGCATTTTGATTGAGAAAATCACTGCTCCCACCAAAACAAATGCTGGAATCTTGCTTCCAGAATCTTCAAACAAGCTGAACTCTGGGAAAGTGGTTGCTGTTGGTCCCGGAAGTCGTTCCAATGAAGGGAAACTAATCCCTGTTTGTGTGAAGGAGGGAGATACTGTTCTTTTGCCTGAATATGGTGGCTCTGAGTATAAGCTTGAAGATAAAACGTATCATCTGTACCGGGAAGACGACATTCTTGGAACTCTACATGACTGA

Protein sequence

MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCVKEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo12022Spo12022gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo12022.1Spo12022.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo12022.1.utr5p.1Spo12022.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo12022.1.CDS.3Spo12022.1.CDS.3CDS
Spo12022.1.CDS.2Spo12022.1.CDS.2CDS
Spo12022.1.CDS.1Spo12022.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo12022.1.utr3p.1Spo12022.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo12022.1.exon.3Spo12022.1.exon.3exon
Spo12022.1.exon.2Spo12022.1.exon.2exon
Spo12022.1.exon.1Spo12022.1.exon.1exon


Homology
[Close]
BLAST of Spo12022.1 vs. NCBI nr
Match: gi|902222170|gb|KNA19109.1| (hypothetical protein SOVF_064700 [Spinacia oleracea])

HSP 1 Score: 196.4 bits (498), Expect = 2.200e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV
Sbjct: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. NCBI nr
Match: gi|731325975|ref|XP_010673788.1| (PREDICTED: 10 kDa chaperonin-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 170.6 bits (431), Expect = 1.300e-39
Identity = 81/97 (83.51%), Postives = 92/97 (94.85%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIPTFNRIL+EKITAP KT AGILLPESS+KLNSGKV+AVGPG+  ++GKLIPV +
Sbjct: 1  MAKRLIPTFNRILVEKITAPAKTTAGILLPESSSKLNSGKVIAVGPGTHCSDGKLIPVSL 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGGSE+KL++KT+HLYREDDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGSEFKLQEKTFHLYREDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. NCBI nr
Match: gi|351722014|ref|NP_001237997.1| (uncharacterized protein LOC100306384 [Glycine max])

HSP 1 Score: 160.6 bits (405), Expect = 1.400e-36
Identity = 76/97 (78.35%), Postives = 87/97 (89.69%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIP FNR+L+EKI  P+KTNAGILLPE S+KLNSGKV+AVGPG  S +GKLIPV V
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGFHSKDGKLIPVAV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGG+E KL++K YHL+R+DDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTEVKLDNKEYHLFRDDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. NCBI nr
Match: gi|593798050|ref|XP_007162063.1| (hypothetical protein PHAVU_001G120500g [Phaseolus vulgaris])

HSP 1 Score: 160.6 bits (405), Expect = 1.400e-36
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIP FNRIL+EKI  P+KTNAGILLPE S+KLNSGKV+AVGPG  S +GKLIPV V
Sbjct: 1  MAKRLIPLFNRILVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGIHSKDGKLIPVAV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
           EGDTVLLPEYGG+E KL++K YHLYR+DDILGTLHD
Sbjct: 61 NEGDTVLLPEYGGTEVKLDNKEYHLYRDDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. NCBI nr
Match: gi|951071347|ref|XP_014491183.1| (PREDICTED: 10 kDa chaperonin-like [Vigna radiata var. radiata])

HSP 1 Score: 160.2 bits (404), Expect = 1.800e-36
Identity = 76/97 (78.35%), Postives = 86/97 (88.66%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIP FNR+L+EKI  P+KTNAGILLPE S+KLNSGKV+AVGPG  S +GKLIPV V
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGIHSKDGKLIPVAV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
           EGDTVLLPEYGG+E KL++K YHLYR+DDILGTLHD
Sbjct: 61 NEGDTVLLPEYGGTEVKLDNKEYHLYRDDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJM5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064700 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.600e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV
Sbjct: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CM88_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g074000 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 9.200e-40
Identity = 81/97 (83.51%), Postives = 92/97 (94.85%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIPTFNRIL+EKITAP KT AGILLPESS+KLNSGKV+AVGPG+  ++GKLIPV +
Sbjct: 1  MAKRLIPTFNRILVEKITAPAKTTAGILLPESSSKLNSGKVIAVGPGTHCSDGKLIPVSL 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGGSE+KL++KT+HLYREDDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGSEFKLQEKTFHLYREDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. UniProtKB/TrEMBL
Match: V7CV48_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G120500g PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.500e-37
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIP FNRIL+EKI  P+KTNAGILLPE S+KLNSGKV+AVGPG  S +GKLIPV V
Sbjct: 1  MAKRLIPLFNRILVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGIHSKDGKLIPVAV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
           EGDTVLLPEYGG+E KL++K YHLYR+DDILGTLHD
Sbjct: 61 NEGDTVLLPEYGGTEVKLDNKEYHLYRDDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. UniProtKB/TrEMBL
Match: C6SZ55_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G125800 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.500e-37
Identity = 76/97 (78.35%), Postives = 87/97 (89.69%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIP FNR+L+EKI  P+KTNAGILLPE S+KLNSGKV+AVGPG  S +GKLIPV V
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGFHSKDGKLIPVAV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGG+E KL++K YHL+R+DDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTEVKLDNKEYHLFRDDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. UniProtKB/TrEMBL
Match: A0A0L9U7G2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g212700 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.200e-36
Identity = 76/97 (78.35%), Postives = 86/97 (88.66%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIP FNR+L+EKI  P+KTNAGILLPE S+KLNSGKV+AVGPG  S +GKLIPV V
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGIHSKDGKLIPVAV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
           EGDTVLLPEYGG+E KL++K YHLYR+DDILGTLHD
Sbjct: 61 NEGDTVLLPEYGGTEVKLDNKEYHLYRDDDILGTLHD 97
[Close]
BLAST of Spo12022.1 vs. ExPASy Swiss-Prot
Match: CH10_ARATH (10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.600e-35
Identity = 68/97 (70.10%), Postives = 84/97 (86.60%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          M KRLIPTFNRIL++++  P KT +GILLPE S+KLNSGKV+AVGPGSR  +GKLIPV V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGG++ KL +  YHL+R++D+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97
[Close]
BLAST of Spo12022.1 vs. ExPASy Swiss-Prot
Match: CH10_BRANA (10 kDa chaperonin OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.400e-35
Identity = 68/97 (70.10%), Postives = 84/97 (86.60%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          M KRLIPTFNRIL++ +  P KT +GILLPE ++KLNSGKV+AVGPGSR  +GKLIPV V
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGG++ KL +K YHL+R++D+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97
[Close]
BLAST of Spo12022.1 vs. ExPASy Swiss-Prot
Match: CH10_ORYLA (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.400e-19
Identity = 47/96 (48.96%), Postives = 68/96 (70.83%), Query Frame = 1 

		  

Query: 3  KRLIPTFNRILIEKITAPTKTNAGILLPESSN-KLNSGKVVAVGPGSRSNEGKLIPVCVK 62
          ++ +P F+R+L+E++ A T T  GI+LPE S  K+    VVAVGPGS + +G++ P+ VK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
           G+ VLLP+YGG++  LEDK Y L+R+ DILG   D
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDYFLFRDADILGKYVD 99
[Close]
BLAST of Spo12022.1 vs. ExPASy Swiss-Prot
Match: CH10_HUMAN (10 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPE1 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 7.500e-19
Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = 1 

		  

Query: 3   KRLIPTFNRILIEKITAPTKTNAGILLPESSN-KLNSGKVVAVGPGSRSNEGKLIPVCVK 62
           ++ +P F+R+L+E+  A T T  GI+LPE S  K+    VVAVG GS+   G++ PV VK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVK 66

Query: 63  EGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
            GD VLLPEYGG++  L+DK Y L+R+ DILG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 102
[Close]
BLAST of Spo12022.1 vs. ExPASy Swiss-Prot
Match: CH10_BOVIN (10 kDa heat shock protein, mitochondrial OS=Bos taurus GN=HSPE1 PE=3 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 7.500e-19
Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = 1 

		  

Query: 3   KRLIPTFNRILIEKITAPTKTNAGILLPESSN-KLNSGKVVAVGPGSRSNEGKLIPVCVK 62
           ++ +P F+R+L+E+  A T T  GI+LPE S  K+    VVAVG GS+   G++ PV VK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVK 66

Query: 63  EGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
            GD VLLPEYGG++  L+DK Y L+R+ DILG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 102
[Close]
BLAST of Spo12022.1 vs. TAIR (Arabidopsis)
Match: AT1G14980.1 (chaperonin 10)

HSP 1 Score: 149.1 bits (375), Expect = 1.500e-36
Identity = 68/97 (70.10%), Postives = 84/97 (86.60%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          M KRLIPTFNRIL++++  P KT +GILLPE S+KLNSGKV+AVGPGSR  +GKLIPV V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGDTVLLPEYGG++ KL +  YHL+R++D+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97
[Close]
BLAST of Spo12022.1 vs. TAIR (Arabidopsis)
Match: AT1G23100.1 (GroES-like family protein)

HSP 1 Score: 134.8 bits (338), Expect = 2.800e-32
Identity = 63/97 (64.95%), Postives = 81/97 (83.51%), Query Frame = 1 

		  

Query: 1  MAKRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNSGKVVAVGPGSRSNEGKLIPVCV 60
          MAKRLIPT NR+L+EKI  P+KT +GILLPE S++LNSG+V+AVGPG+R   G LIPV V
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGSEYKLEDKTYHLYREDDILGTLHD 98
          KEGD VLLPE+GG++ KL +K + LYR++DI+ TLH+
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97
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BLAST of Spo12022.1 vs. TAIR (Arabidopsis)
Match: AT5G20720.1 (chaperonin 20)

HSP 1 Score: 64.7 bits (156), Expect = 3.600e-11
Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 1 

		  

Query: 3   KRLIPTFNRILIEKITAPTKTNAGILLPESSNKLNS-GKVVAVGPGSRSNEGKLIPVCVK 62
           K L P  +R+ I+   A  KT  G+LL E++ +  S G V+AVGPGS   EGK+ P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGSEYKLED-KTYHLYREDDILGTL 96
            G TVL  +Y G+++K +D   Y   R  D++  L
Sbjct: 218 TGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252
The following BLAST results are available for this feature:
BLAST of Spo12022.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902222170|gb|KNA19109.1|2.2e-47100.hypothetical protein SOVF_0647... [more]
gi|731325975|ref|XP_010673788.1|1.3e-3983.5PREDICTED: 10 kDa chaperonin-l... [more]
gi|351722014|ref|NP_001237997.1|1.4e-3678.3uncharacterized protein LOC100... [more]
gi|593798050|ref|XP_007162063.1|1.4e-3679.3hypothetical protein PHAVU_001... [more]
gi|951071347|ref|XP_014491183.1|1.8e-3678.3PREDICTED: 10 kDa chaperonin-l... [more]
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BLAST of Spo12022.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RJM5_SPIOL1.6e-47100.Uncharacterized protein OS=Spi... [more]
A0A0J8CM88_BETVU9.2e-4083.5Uncharacterized protein OS=Bet... [more]
V7CV48_PHAVU9.5e-3779.3Uncharacterized protein OS=Pha... [more]
C6SZ55_SOYBN9.5e-3778.3Uncharacterized protein OS=Gly... [more]
A0A0L9U7G2_PHAAN1.2e-3678.3Uncharacterized protein OS=Pha... [more]
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BLAST of Spo12022.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CH10_ARATH2.6e-3570.110 kDa chaperonin OS=Arabidops... [more]
CH10_BRANA4.4e-3570.110 kDa chaperonin OS=Brassica ... [more]
CH10_ORYLA3.4e-1948.910 kDa heat shock protein, mit... [more]
CH10_HUMAN7.5e-1950.010 kDa heat shock protein, mit... [more]
CH10_BOVIN7.5e-1950.010 kDa heat shock protein, mit... [more]
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BLAST of Spo12022.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G14980.11.5e-3670.1chaperonin 10[more]
AT1G23100.12.8e-3264.9GroES-like family protein[more]
AT5G20720.13.6e-1140.0chaperonin 20[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011032GroES-likeunknownSSF50129GroES-likecoord: 4..95
score: 3.41
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 82..95
score: 5.3E-16coord: 61..73
score: 5.3E-16coord: 5..20
score: 5.3E-16coord: 26..47
score: 5.3
IPR020818GroES chaperonin familyGENE3D2.30.33.40coord: 3..95
score: 3.2
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 1..97
score: 5.0
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 5..94
score: 1.2
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 4..95
score: 5.2
NoneNo IPR availablePANTHERPTHR10772:SF810 KDA CHAPERONINcoord: 1..97
score: 5.0

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0005737 cytoplasm