Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide exon CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAAT GTATGCCCCAATTGGTGTTTTCTACCAACCTTAGCTTCCATCAAAATGGGAGAATTGTAATTACTTGGGATCCTGGTGCTTTTGTGGTTGATATTGCTCTGATGAACACTCAGCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAA GTATGTGTATGGATACCCAATGTATAGAGTTTTACAGAAGTTGAAATAGATCAAGGCATATGAATGGAAGAAGCTTGGTAGAAGTAATTCCATCCTTGGTTAGGGAAACAGAAATGAAGGAATTGCGTAAAGAAGAATACAGTGGATTAGAATAAATATCACCAACAACAGCTTCTATTTTTCCTCAACTTCATTCCTTACACCTTTGTAGGTTGCCGGATTTGAGGACAATAAAATCTGGGGAATGCTCCTTTTCTGACCTCTGCTATCTGTATATATCCGAGTGTCCAAAATTGAAGGTGGTCCTTCCATTCACAATGCAGTTTCTCCTTCCAAATCTAGAAAGAATTGAAGTGTTTACATGTAACTATGTGGAGGAGATATTTGAATCAAACAAGGATATTCAACCCAACCCCCTTCTTGCTCTCCCTAAATTAGGGGGTTGCTCCTTTTCTCACCTTCGCATGCTAGAAAAAATGCAGTGTCCAAAACTGAATGTGGTCTTTCCATTAACACAACAGCTTCATCTTCCTAATCTGGAAATACTTTATATGGAAGAATGTGATTCGATGGAGGAGATATTTGAATTAAACAAGGGAAGTCAACCCAACCCCCTACTTGCTTTCCCTAAATTAGGGGGTTGCTCCTTTTCTCACGTTCGCATTCTAGAAATAATCCAGTGTCCAAAACTGAAGGTGGTCTTCCCATTCACGCAACAACTTGACCTTCCTAATCTGGAAGTACTTCATGTGGAAGAATGTGATTCGATGGAGGAGATATTTGAATCAATAAAGGGTACTCAACCCAACACCCTTCTTTCTCTCCCTAATTTAGGGGACCTTTCCTTTTCTCACCTTCGCCATCTAGAAATAAGTTATTGTCCAAAACTGAAAGTGGTCTTCCCATTCAAGCAACAACTTCACCTTCCAAATCTGATATTAATTCAAGTGGAATATTGTGAATCAGTGGAGGAGATATTTGAAGCAAACAAGGGTACTCAATCCAACCCCCTTCTTTCTCTCCCTAAATTAGAGAGAATCCAGTTGCTAAGTCTACCAAAGTTGGGTAGTATCTATAGGGGTCTAATCTTCTGTGTCTCTCTTTGTTTTATCGACGTTGGAAGTCCGAGGCTGATGAATTTGAAGCAACCAGGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAG GTGATGCTCATCTTATTTATGATCATATCTTTTATCAATTTCCACAAGCAGCAGCTTACCTCCCTGATGCTCATGATAACAATGAAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAG TTTGTTTTTTAGATTGAGTGTGTAGAGTAATCCATTTGATAATAATTGAACACTTCGTATTAAGGGCGAATATAACAAAATAATTGTAGTTAGTTCATCACATATTTTGAAGGTCTCATTGAGAGATAATGATATCAAGGAAATTCCAATTGGTAAG mRNA sequence
ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAATCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAAGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAGTTTGTTTTTTAGATTGAGTGTGTAGAGTAATCCATTTGATAATAATTGAACACTTCGTATTAAGGGCGAATATAACAAAATAATTGTAGTTAGTTCATCACATATTTTGAAGGTCTCATTGAGAGATAATGATATCAAGGAAATTCCAATTGGTAAG Coding sequence (CDS)
ATGGATAGCTTGCTTTGTTGGAATGTTAGAGGGCCGAACAGGAGGGATAGACAAGGAGAGGTGAGGAGATTTATTGCTTCTCATCACATCAGAATGTTCAGCCTTCTAGAAACTAGGGTGAAAGCCCCTATAATGGGTGACATGTACCTCAATCTCATACATTGCCATGTTATCCCCAGAAGCACTGACACTGGTTTTCATTGCACCTTCATTTATGGCCTTCATGACAGAACTATCACAGAACCACCACTTTGGGATTCTCTTAAAGTAATTGCTGACAAGTGCAAAGAGGCTTGGATCATTATGGGGGACTTCAATGCCCTCATGGACCTAGATGACAGAATAGGATCCACAGTTAGAACTTCTGAAATTCAGCCTATGAGGAGCTGTATGAATTACTGCCAGTTGGCTGAGGTTAAAACAGTAGGGAGATATTACACATGGAATAACAAACAAGATGGGGTAGATAGAGTCTTTTCCATAATAGACAGAGTTCTGGCTAACTCTGATTGGGGAGATCTATTTGATTCTGCAAAAGTTGCTTATCTTCCAGATGGTGATTTTGATCATTACCCAATGATTCTCAACTGTTACCAAAAACCCCCACAGAAAAGGCCATTTAGATTCTACAACACATGGACCTCCTCTCCTAGGTTCAATACCATAGTGGAGGCAAATTGGGGGAAGCCTTTTATTAATGATTCATCATTGTTAGCATTGTCTTCCTTCGCCGGCAACCAAAGATTTTTGGAGAGGTTACAACGGGATTACCCAGAAGAAAATGATGACGATGAAGACAAGGATGATGATGATGATCAAGTTTCACGACCAGCCTTCCATATAGACGCTGATGATTATGATGAGGCGGATAAGAGTAAATGGCTTGTTTCTGAGTTTAACATTACCAATCAAACTCAATCACGGTCGGTCCTTGCTGATGATGATAAAGAAAATGAGAAAAGGAAATGGGCAGCATCATTGTCCTTATCCCTCCCCCGTTAG Protein sequence
MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNLIHCHVIPRSTDTGFHCTFIYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPPQKRPFRFYNTWTSSPRFNTIVEANWGKPFINDSSLLALSSFAGNQRFLERLQRDYPEENDDDEDKDDDDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSLSLPR
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name Unique Name Type
Spo16992 Spo16992 gene
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Type
Spo16992.1 Spo16992.1-protein polypeptide
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Type
Spo16992.1.exon.1 Spo16992.1.exon.1 exon
Spo16992.1.exon.2 Spo16992.1.exon.2 exon
Spo16992.1.exon.3 Spo16992.1.exon.3 exon
Spo16992.1.exon.4 Spo16992.1.exon.4 exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Type
Spo16992.1.CDS.1 Spo16992.1.CDS.1 CDS
Spo16992.1.CDS.2 Spo16992.1.CDS.2 CDS
Spo16992.1.CDS.3 Spo16992.1.CDS.3 CDS
Spo16992.1.CDS.4 Spo16992.1.CDS.4 CDS
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Type
Spo16992.1.utr3p.1 Spo16992.1.utr3p.1 three_prime_UTR
Homology
BLAST of Spo16992.1 vs. NCBI nr
Match:
gi|731347181|ref|XP_010684856.1| (PREDICTED: uncharacterized protein LOC104899377 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 224.9 bits (572), Expect = 2.000e-55
Identity = 109/265 (41.13%), Postives = 153/265 (57.74%), Query Frame = 1
Query: 1 MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNL-------- 60 MD+++ WNVRG N R++Q +VRRFI SH+I++F LLETR+K +G MY+N+ Sbjct: 1 MDNIMAWNVRGLNNRNKQNDVRRFIESHNIKLFGLLETRIKMKNLGSMYMNVCSGWCFTH 60 Query: 61 ------------------------------IHCHVIPRSTDTGFHCTFIYGLHDRTITEP 120 +HC V ++ GF CTF+YG +D+ + Sbjct: 61 NLNCHENGSIIIGWCPNAFDVNIKVVHSQFVHCWVQSKTGANGFDCTFVYGFNDQQ-SRC 120 Query: 121 PLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTV 180 LWD LK I + AW+I+GDFNA+ + DDR+GS VR +E+ PM C+ C +++VK Sbjct: 121 ELWDGLKQINSRVVGAWLILGDFNAVSNTDDRLGSQVRRAELTPMLECITECHVSDVKAT 180 Query: 181 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPP 228 RYYTW NKQDG RVFS IDRVLAN W D +D+A+V + +G++DH P+++ Y Sbjct: 181 VRYYTWCNKQDGDRRVFSRIDRVLANQLWMDSYDNAEVCIMAEGEYDHTPLLVCVYPDVS 240
BLAST of Spo16992.1 vs. NCBI nr
Match:
gi|731340214|ref|XP_010681273.1| (PREDICTED: uncharacterized protein LOC104896255 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 217.2 bits (552), Expect = 4.200e-53
Identity = 106/246 (43.09%), Postives = 149/246 (60.57%), Query Frame = 1
Query: 1 MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNL-------- 60 MDS+L WNVRG N + +Q EVR FI+SH++++F LLETR KAP +G +Y N+ Sbjct: 1 MDSILSWNVRGLNNKTKQIEVRNFISSHNVKLFGLLETREKAPNLGSIYNNVCSGWCFSH 60 Query: 61 ------------------------------IHCHVIPRSTDTGFHCTFIYGLHDRTITEP 120 IHC + + F CTF+YG +D E Sbjct: 61 NLSCHKNGRILIRWCPNSFTVDILQVNSQYIHCKIRTKE-GMEFKCTFVYGFNDAHSRE- 120 Query: 121 PLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTV 180 LW LK +A + +E W+++GDFNAL +++DRIGS V +EI+PM CM +C L++VK+ Sbjct: 121 ILWSGLKRLAQQPEEPWVLLGDFNALSNIEDRIGSMVSMAEIRPMIDCMQFCNLSDVKSS 180 Query: 181 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPP 209 GRY+TWNNKQDG RVFSIIDRV+A W D F+S V ++P+G +DH P++L + + Sbjct: 181 GRYFTWNNKQDGPKRVFSIIDRVIATQKWLDSFESVVVVFMPEGSYDHTPVVLQVHPEIH 240
BLAST of Spo16992.1 vs. NCBI nr
Match:
gi|731346454|ref|XP_010684465.1| (PREDICTED: uncharacterized protein LOC104899024 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 205.3 bits (521), Expect = 1.700e-49
Identity = 118/346 (34.10%), Postives = 182/346 (52.60%), Query Frame = 1
Query: 1 MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNLI------- 60 MD++L WNVR N + +Q +VR+F++SH++++FSLLETRVK+ MG +Y+NL Sbjct: 1 MDNILTWNVRELNSKVKQQDVRKFLSSHNVKLFSLLETRVKSHNMGRVYMNLCPGWCFTH 60 Query: 61 --HCH----------------VIPRSTDTGFHCT-------------FIYGLHDRTITEP 120 CH I T HC F+YG +D + Sbjct: 61 TNSCHGNGRIMVGWWPHDFRINIIEMTSQYIHCAVKPTQGNAEFWCTFVYGFNDCN-SRT 120 Query: 121 PLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTV 180 LW L+ IA KC W+++GD NAL ++DRIGS VR +EI+PM C+ C L ++K+ Sbjct: 121 ELWTGLRNIASKCNLPWVVLGDSNALSRIEDRIGSLVRMAEIKPMLDCLIECGLVDMKSS 180 Query: 181 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPP 240 GR+YTW+NKQDG V S IDR + N W ++F++A+ +L +GDFDH P++L+ Y +PP Sbjct: 181 GRHYTWSNKQDGAALVMSTIDRAVVNKHWQEIFENAEAVFLLEGDFDHTPILLSVYPEPP 240 Query: 241 QKRPFRFYNTWTSSPRFNTIVEANWGKPFINDSSLLALSSFAGNQRFLERLQRDYPEEND 300 QK+ FRF N W P + W K + + + L +L++ D Sbjct: 241 QKKKFRFCNAWCEYPVVMEAMRREWSKLVVGCPMYRVIEKLKKVREALRQLKKQGVCVVD 300 Query: 301 DDEDKDDDDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSR 309 +E K + +++ A H + DEA + + + + N + +R Sbjct: 301 MEEVKAREKLAIAQNAMH-NMPSNDEAIRRERVFYQANKARRVNNR 344
BLAST of Spo16992.1 vs. NCBI nr
Match:
gi|731313775|ref|XP_010681976.1| (PREDICTED: uncharacterized protein LOC104896886 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 204.1 bits (518), Expect = 3.700e-49
Identity = 94/203 (46.31%), Postives = 125/203 (61.58%), Query Frame = 1
Query: 53 IHCHVIPRSTDTGFHCTFIYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDLD 112 IHC + P +GF CTF+YG +D + LW+ LK IA K W++MGDFNAL +D Sbjct: 6 IHCEIKPTQGGSGFVCTFVYGFNDLN-SRSDLWEGLKEIAKKVTGGWVLMGDFNALSSVD 65 Query: 113 DRIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDWG 172 DRIGS+VR SE++PM CM+ C L++VK GRYYTW+NKQ+G RVFS IDRVLAN+ W Sbjct: 66 DRIGSSVRMSEVRPMLDCMHECGLSDVKATGRYYTWSNKQEGTTRVFSRIDRVLANTMWL 125 Query: 173 DLFDSAKVAYLPDGDFDHYPMILNCYQKPPQKRPFRFYNTWTSSPRFNTIVEANWGKPFI 232 D +D A V++LP+G FDH P +L+ Y P RPF+F N W P V+ W P Sbjct: 126 DSYDQAAVSFLPEGKFDHSPALLSVYDVPVIHRPFKFCNVWIQYPAMMEAVKEAWRNPIH 185 Query: 233 NDSSLLALSSFAGNQRFLERLQR 256 + + +R L L++ Sbjct: 186 GCPMYIVVEKMKRVKRVLRSLKK 207
BLAST of Spo16992.1 vs. NCBI nr
Match:
gi|731313743|ref|XP_010681618.1| (PREDICTED: uncharacterized protein LOC104896557 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 197.2 bits (500), Expect = 4.500e-47
Identity = 99/265 (37.36%), Postives = 147/265 (55.47%), Query Frame = 1
Query: 1 MDSLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNL-------- 60 MD++L WNVRG NR+ +Q +V+RFI+ H I + SLLET+VK MG++Y L Sbjct: 1 MDNILMWNVRGLNRQAKQLDVKRFISMHKIGLLSLLETKVKMSKMGNLYQRLCDGWCFTT 60 Query: 61 ---------IHCHVIPRSTDTG---------------------FHCTFIYGLHDRTITEP 120 I +P S D F C+F+YG +D+ E Sbjct: 61 NNSVVDSGRIIVAWLPNSFDVAVELMTDQLIHCRVQPKGPVAPFMCSFVYGKNDKKGRE- 120 Query: 121 PLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSCMNYCQLAEVKTV 180 LW SL+ + W+++GD N +++ D+RIGSTVR EI+ R C+ C+L ++K Sbjct: 121 SLWQSLRRV--HTSMPWVVLGDINVVLNCDERIGSTVRWHEIEEFRECVARCELEDMKQQ 180 Query: 181 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILNCYQKPP 228 GR++TW NKQ+G RVFS +DR + N W ++ A + YLP+GD+DH P +++ + Sbjct: 181 GRFFTWTNKQEGASRVFSKVDRAVVNGAWRQQYEEAMITYLPEGDYDHCPGLVSLQKGVM 240
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9QFK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_191380 PE=4 SV=1)
HSP 1 Score: 167.9 bits (424), Expect = 2.000e-38
Identity = 95/124 (76.61%), Postives = 95/124 (76.61%), Query Frame = 1
Query: 239 ALSSFAGNQRFLERLQRDYP-----------------------------EENDDDEDKDD 298 ALSSFAGNQRFLERLQRDYP EENDDDEDKDD Sbjct: 210 ALSSFAGNQRFLERLQRDYPGDAHLIYDHIFYQFPQAAAYLPDAHDNNEEENDDDEDKDD 269 Query: 299 DDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSL 334 DDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSL Sbjct: 270 DDDQVSRPAFHIDADDYDEADKSKWLVSEFNITNQTQSRSVLADDDKENEKRKWAASLSL 329
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8DVH8_BETVU (Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_014650 PE=4 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 5.600e-36
Identity = 73/180 (40.56%), Postives = 105/180 (58.33%), Query Frame = 1
Query: 52 LIHCHVIPRSTDTGFHCTFIYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDL 111 +IHC V + F+CTF+Y + + LW L++IA KEAW+++GDFN +++ Sbjct: 116 MIHCKVQAITNKKEFYCTFVYAFNSAEL-RVELWKDLEMIAGNMKEAWVVLGDFNCVLER 175 Query: 112 DDRIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDW 171 +++IG VR ++ P R C+ C+L ++K G YYTWNNKQ RVF +DRVL N W Sbjct: 176 EEKIGGPVRDHDMIPFRRCVTKCELEDMKYSGCYYTWNNKQTDGSRVFCKLDRVLYNVRW 235 Query: 172 GDLFDSAKVAYLPDGDFDHYPMILNCYQ-KPPQKRPFRFYNTWTSSPRFNTIVEANWGKP 231 + F A+ ++P+G FDH PM+L +Q K PFRFY W +P F V W P Sbjct: 236 CEEFPIAETRFMPEGLFDHSPMLLQTHQVKRKGASPFRFYKMWCEAPDFPRRVREAWSSP 294
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match:
A0A072TV54_MEDTR (Endonuclease/exonuclease/phosphatase family protein OS=Medicago truncatula GN=MTR_8g098280 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 1.200e-27
Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 1
Query: 3 SLLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAP----IMGDMY--------- 62 +L+CWNVRG N+ +Q E++ + + + LLETRVKA + G M+ Sbjct: 2 TLVCWNVRGINKPFKQKEIKNLLHKNKFEICVLLETRVKAEKFKKVSGLMFRDWSLINNY 61 Query: 63 --------------------------LNLIHCHVIPRSTDTGFHCTFIYGLHDRTITEPP 122 + IHC VI +++ F+ +Y + Sbjct: 62 GMDAANGRIWIGWNPKFWDVKFDASCVQAIHCEVIHLNSNICFNLVAVYAFKTQE-QRKG 121 Query: 123 LWDSLKVIADKCKEAWIIMGDFNALMDLDDRI-GSTVRTSEIQPMRSCMNYCQLAEVKTV 182 LW + I +K +I GDFN+++ +DDR+ G+ V EIQ CM L+EV+T+ Sbjct: 122 LWKFINDICNKTSGNLLIGGDFNSVLLVDDRLNGNLVTQQEIQDFADCMLTNNLSEVRTI 181 Query: 183 GRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYPMILN-CYQKP 229 G YYTW N Q D ++S IDR LAN++W F + P G DH + L+ Y Sbjct: 182 GDYYTWCNNQASNDGIYSKIDRFLANTNWLHSFSNVVGEVYPKGVSDHCHISLDLAYPSS 241
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match:
A2Q500_MEDTR (Endonuclease/exonuclease/phosphatase OS=Medicago truncatula GN=MtrDRAFT_AC158465g18v2 PE=4 SV=1)
HSP 1 Score: 125.2 bits (313), Expect = 1.500e-25
Identity = 80/265 (30.19%), Postives = 123/265 (46.42%), Query Frame = 1
Query: 4 LLCWNVRGPNRRDRQGEVRRFIASHHIRMFSLLETRVKAPIMGDMYLNLIHCHVIPRSTD 63 L+CWNVRG N+ +Q E++ F+ + M L+ETR+KA + + + + D Sbjct: 520 LVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYD 579 Query: 64 TGFHCTFIYGLHDRTITEPPLWDSLKVI--------ADKC---------------KEAW- 123 + + + + P+ S + I + +C KE W Sbjct: 580 SAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELWN 639 Query: 124 -------------IIMGDFNALMDLDD-RIGSTVRTSEIQPMRSCMNYCQLAEVKTVGRY 183 +I GDFN ++ +DD R G+ V EIQ C+ + +L+EV+T+G Y Sbjct: 640 FIAHTSAQNSRNLLIGGDFNNVLLVDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRTIGDY 699 Query: 184 YTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDHYP--MILNCYQKPPQ 229 YTW N Q DR++S IDR +AN+ W F +A LP G DH P M ++C P+ Sbjct: 700 YTWCNNQTSGDRIYSKIDRFIANTSWLQKFTNAVGEVLPKGVSDHCPISMDMSC-PASPK 759
BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9Q6U6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_215240 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 9.900e-25
Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 71 IYGLHDRTITEPPLWDSLKVIADKCKEAWIIMGDFNALMDLDDRIGSTVRTSEIQPMRSC 130 +YG H+ + +W L+ I WI++GDFN+ + DDR+GSTV +EI+ + Sbjct: 1 VYG-HNDNASRLAMWRDLERIGANMVMPWIVVGDFNSPLHYDDRVGSTVSYAEIRDFQQM 60 Query: 131 MNYCQLAEVKTVGRYYTWNNKQDGVDRVFSIIDRVLANSDWGDLFDSAKVAYLPDGDFDH 190 +N C L ++ G YTWNNKQ G RV S IDR L N W + + ++ V +LP+G FDH Sbjct: 61 VNKCNLVDLACTGPRYTWNNKQLGSSRVLSKIDRSLINDVWIENWPNSIVHFLPEGWFDH 120 Query: 191 YPMILNCYQKPPQKR-PFRFYNTWTSSPRFNTIVEANW 228 PM++ ++ + R F+F++ WTS P + V+ W Sbjct: 121 SPMVIRFDKQCGKGRASFKFFDMWTSHPEYLDTVKQAW 157
The following BLAST results are available for this feature:
BLAST of Spo16992.1 vs. NCBI nr
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. NCBI nr )
Total hits: 5
A T G G A T A G C T T G C T T T G T T G G A A T G T T A G A G G G C C G A A C A G G A G G G A T A G A C A A G G A G A G G T G A G G A G A T T T A T T G C T T C T C A T C A C A T C A G A A T G T T C A G C C T T C T A G A A A C T A G G G T G A A A G C C C C T A T A A T G G G T G A C A T G T A C C T C A A T C T C A T A C A T T G C C A T G T T A T C C C C A G A A G C A C T G A C A C T G G T T T T C A T T G C A C C T T C A T T T A T G G C C T T C A T G A C A G A A C T A T C A C A G A A C C A C C A C T T T G G G A T T C T C T T A A A G T A A T T G C T G A C A A G T G C A A A G A G G C T T G G A T C A T T A T G G G G G A C T T C A A T G C C C T C A T G G A C C T A G A T G A C A G A A T A G G A T C C A C A G T T A G A A C T T C T G A A A T T C A G C C T A T G A G G A G C T G T A T G A A T T A C T G C C A G T T G G C T G A G G T T A A A A C A G T A G G G A G A T A T T A C A C A T G G A A T A A C A A A C A A G A T G G G G T A G A T A G A G T C T T T T C C A T A A T A G A C A G A G T T C T G G C T A A C T C T G A T T G G G G A G A T C T A T T T G A T T C T G C A A A A G T T G C T T A T C T T C C A G A T G G T G A T T T T G A T C A T T A C C C A A T G A T T C T C A A C T G T T A C C A A A A A C C C C C A C A G A A A A G G C C A T T T A G A T T C T A C A A C A C A T G G A C C T C C T C T C C T A G G T T C A A T A C C A T A G T G G A G G C A A A T T G G G G G A A G C C T T T T A T T A A T G A T T C A T C A T T G T T A G C A T T G T C T T C C T T C G C C G G C A A C C A A A G A T T T T T G G A G A G G T T A C A A C G G G A T T A C C C A G A A G A A A A T G A T G A C G A T G A A G A C A A G G A T G A T G A T G A T G A T C A A G T T T C A C G A C C A G C C T T C C A T A T A G A C G C T G A T G A T T A T G A T G A G G C G G A T A A G A G T A A A T G G C T T G T T T C T G A G T T T A A C A T T A C C A A T C A A A C T C A A T C A C G G T C G G T C C T T G C T G A T G A T G A T A A A G A A A A T G A G A A A A G G A A A T G G G C A G C A T C A T T G T C C T T A T C C C T C C C C C G T T A G T T T G T T T T T T A G A T T G A G T G T G T A G A G T A A T C C A T T T G A T A A T A A T T G A A C A C T T C G T A T T A A G G G C G A A T A T A A C A A A A T A A T T G T A G T T A G T T C A T C A C A T A T T T T G A A G G T C T C A T T G A G A G A T A A T G A T A T C A A G G A A A T T C C A A T T G G T A A G 100 200 300 400 500 600 700 800 900 1000 1100 Expect = 2.00e-55 / Id = 41.13 Expect = 4.20e-53 / Id = 43.09 Expect = 1.70e-49 / Id = 34.10 Expect = 3.70e-49 / Id = 46.31 Expect = 4.50e-47 / Id = 37.36 Sequence XP_010684856.1 XP_010681273.1 XP_010684465.1 XP_010681976.1 XP_010681618.1
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BLAST of Spo16992.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL )
Total hits: 5
A T G G A T A G C T T G C T T T G T T G G A A T G T T A G A G G G C C G A A C A G G A G G G A T A G A C A A G G A G A G G T G A G G A G A T T T A T T G C T T C T C A T C A C A T C A G A A T G T T C A G C C T T C T A G A A A C T A G G G T G A A A G C C C C T A T A A T G G G T G A C A T G T A C C T C A A T C T C A T A C A T T G C C A T G T T A T C C C C A G A A G C A C T G A C A C T G G T T T T C A T T G C A C C T T C A T T T A T G G C C T T C A T G A C A G A A C T A T C A C A G A A C C A C C A C T T T G G G A T T C T C T T A A A G T A A T T G C T G A C A A G T G C A A A G A G G C T T G G A T C A T T A T G G G G G A C T T C A A T G C C C T C A T G G A C C T A G A T G A C A G A A T A G G A T C C A C A G T T A G A A C T T C T G A A A T T C A G C C T A T G A G G A G C T G T A T G A A T T A C T G C C A G T T G G C T G A G G T T A A A A C A G T A G G G A G A T A T T A C A C A T G G A A T A A C A A A C A A G A T G G G G T A G A T A G A G T C T T T T C C A T A A T A G A C A G A G T T C T G G C T A A C T C T G A T T G G G G A G A T C T A T T T G A T T C T G C A A A A G T T G C T T A T C T T C C A G A T G G T G A T T T T G A T C A T T A C C C A A T G A T T C T C A A C T G T T A C C A A A A A C C C C C A C A G A A A A G G C C A T T T A G A T T C T A C A A C A C A T G G A C C T C C T C T C C T A G G T T C A A T A C C A T A G T G G A G G C A A A T T G G G G G A A G C C T T T T A T T A A T G A T T C A T C A T T G T T A G C A T T G T C T T C C T T C G C C G G C A A C C A A A G A T T T T T G G A G A G G T T A C A A C G G G A T T A C C C A G A A G A A A A T G A T G A C G A T G A A G A C A A G G A T G A T G A T G A T G A T C A A G T T T C A C G A C C A G C C T T C C A T A T A G A C G C T G A T G A T T A T G A T G A G G C G G A T A A G A G T A A A T G G C T T G T T T C T G A G T T T A A C A T T A C C A A T C A A A C T C A A T C A C G G T C G G T C C T T G C T G A T G A T G A T A A A G A A A A T G A G A A A A G G A A A T G G G C A G C A T C A T T G T C C T T A T C C C T C C C C C G T T A G T T T G T T T T T T A G A T T G A G T G T G T A G A G T A A T C C A T T T G A T A A T A A T T G A A C A C T T C G T A T T A A G G G C G A A T A T A A C A A A A T A A T T G T A G T T A G T T C A T C A C A T A T T T T G A A G G T C T C A T T G A G A G A T A A T G A T A T C A A G G A A A T T C C A A T T G G T A A G 100 200 300 400 500 600 700 800 900 1000 1100 Expect = 2.00e-38 / Id = 76.61 Expect = 5.60e-36 / Id = 40.56 Expect = 1.20e-27 / Id = 30.71 Expect = 1.50e-25 / Id = 30.19 Expect = 9.90e-25 / Id = 37.97 Sequence A0A0K9QFK1_SPIOL A0A0J8DVH8_BETVU A0A072TV54_MEDTR A2Q500_MEDTR A0A0K9Q6U6_SPIOL
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BLAST of Spo16992.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. ExPASy SwissProt )
Total hits: 0
A T G G A T A G C T T G C T T T G T T G G A A T G T T A G A G G G C C G A A C A G G A G G G A T A G A C A A G G A G A G G T G A G G A G A T T T A T T G C T T C T C A T C A C A T C A G A A T G T T C A G C C T T C T A G A A A C T A G G G T G A A A G C C C C T A T A A T G G G T G A C A T G T A C C T C A A T C T C A T A C A T T G C C A T G T T A T C C C C A G A A G C A C T G A C A C T G G T T T T C A T T G C A C C T T C A T T T A T G G C C T T C A T G A C A G A A C T A T C A C A G A A C C A C C A C T T T G G G A T T C T C T T A A A G T A A T T G C T G A C A A G T G C A A A G A G G C T T G G A T C A T T A T G G G G G A C T T C A A T G C C C T C A T G G A C C T A G A T G A C A G A A T A G G A T C C A C A G T T A G A A C T T C T G A A A T T C A G C C T A T G A G G A G C T G T A T G A A T T A C T G C C A G T T G G C T G A G G T T A A A A C A G T A G G G A G A T A T T A C A C A T G G A A T A A C A A A C A A G A T G G G G T A G A T A G A G T C T T T T C C A T A A T A G A C A G A G T T C T G G C T A A C T C T G A T T G G G G A G A T C T A T T T G A T T C T G C A A A A G T T G C T T A T C T T C C A G A T G G T G A T T T T G A T C A T T A C C C A A T G A T T C T C A A C T G T T A C C A A A A A C C C C C A C A G A A A A G G C C A T T T A G A T T C T A C A A C A C A T G G A C C T C C T C T C C T A G G T T C A A T A C C A T A G T G G A G G C A A A T T G G G G G A A G C C T T T T A T T A A T G A T T C A T C A T T G T T A G C A T T G T C T T C C T T C G C C G G C A A C C A A A G A T T T T T G G A G A G G T T A C A A C G G G A T T A C C C A G A A G A A A A T G A T G A C G A T G A A G A C A A G G A T G A T G A T G A T G A T C A A G T T T C A C G A C C A G C C T T C C A T A T A G A C G C T G A T G A T T A T G A T G A G G C G G A T A A G A G T A A A T G G C T T G T T T C T G A G T T T A A C A T T A C C A A T C A A A C T C A A T C A C G G T C G G T C C T T G C T G A T G A T G A T A A A G A A A A T G A G A A A A G G A A A T G G G C A G C A T C A T T G T C C T T A T C C C T C C C C C G T T A G T T T G T T T T T T A G A T T G A G T G T G T A G A G T A A T C C A T T T G A T A A T A A T T G A A C A C T T C G T A T T A A G G G C G A A T A T A A C A A A A T A A T T G T A G T T A G T T C A T C A C A T A T T T T G A A G G T C T C A T T G A G A G A T A A T G A T A T C A A G G A A A T T C C A A T T G G T A A G 100 200 300 400 500 600 700 800 900 1000 1100 Sequence
Match Name E-value Identity Description
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BLAST of Spo16992.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. TAIR )
Total hits: 0
A T G G A T A G C T T G C T T T G T T G G A A T G T T A G A G G G C C G A A C A G G A G G G A T A G A C A A G G A G A G G T G A G G A G A T T T A T T G C T T C T C A T C A C A T C A G A A T G T T C A G C C T T C T A G A A A C T A G G G T G A A A G C C C C T A T A A T G G G T G A C A T G T A C C T C A A T C T C A T A C A T T G C C A T G T T A T C C C C A G A A G C A C T G A C A C T G G T T T T C A T T G C A C C T T C A T T T A T G G C C T T C A T G A C A G A A C T A T C A C A G A A C C A C C A C T T T G G G A T T C T C T T A A A G T A A T T G C T G A C A A G T G C A A A G A G G C T T G G A T C A T T A T G G G G G A C T T C A A T G C C C T C A T G G A C C T A G A T G A C A G A A T A G G A T C C A C A G T T A G A A C T T C T G A A A T T C A G C C T A T G A G G A G C T G T A T G A A T T A C T G C C A G T T G G C T G A G G T T A A A A C A G T A G G G A G A T A T T A C A C A T G G A A T A A C A A A C A A G A T G G G G T A G A T A G A G T C T T T T C C A T A A T A G A C A G A G T T C T G G C T A A C T C T G A T T G G G G A G A T C T A T T T G A T T C T G C A A A A G T T G C T T A T C T T C C A G A T G G T G A T T T T G A T C A T T A C C C A A T G A T T C T C A A C T G T T A C C A A A A A C C C C C A C A G A A A A G G C C A T T T A G A T T C T A C A A C A C A T G G A C C T C C T C T C C T A G G T T C A A T A C C A T A G T G G A G G C A A A T T G G G G G A A G C C T T T T A T T A A T G A T T C A T C A T T G T T A G C A T T G T C T T C C T T C G C C G G C A A C C A A A G A T T T T T G G A G A G G T T A C A A C G G G A T T A C C C A G A A G A A A A T G A T G A C G A T G A A G A C A A G G A T G A T G A T G A T G A T C A A G T T T C A C G A C C A G C C T T C C A T A T A G A C G C T G A T G A T T A T G A T G A G G C G G A T A A G A G T A A A T G G C T T G T T T C T G A G T T T A A C A T T A C C A A T C A A A C T C A A T C A C G G T C G G T C C T T G C T G A T G A T G A T A A A G A A A A T G A G A A A A G G A A A T G G G C A G C A T C A T T G T C C T T A T C C C T C C C C C G T T A G T T T G T T T T T T A G A T T G A G T G T G T A G A G T A A T C C A T T T G A T A A T A A T T G A A C A C T T C G T A T T A A G G G C G A A T A T A A C A A A A T A A T T G T A G T T A G T T C A T C A C A T A T T T T G A A G G T C T C A T T G A G A G A T A A T G A T A T C A A G G A A A T T C C A A T T G G T A A G 100 200 300 400 500 600 700 800 900 1000 1100 Sequence
Match Name E-value Identity Description
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