Spo13247.1 (mRNA) | SpinachBase

Overview


Name	Spo13247.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	GC-rich sequence DNA-binding factor 1
Location	chr4 : 85709192 .. 85714569 (+)
Sequence length	1347

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCAGGTGAGCCCAAGCGATGAGAGAGAAAGATACGAGAGGTGAGAGAAATTGAAGGTACGATGGAGATAATCCTGGTGGGGAGACCGGGAGAGGATATAGAGAGGGTGGAAACGTAAATACTCTATTGTTAAGGAAAATGACAAAAAAAACATGAAGGATTTTAGGGGCATTTTAGTAATCTAACTATTGGGTGAATAGTATTCAATGTTCAAGGCTTTAGAAGTGTTATGATTCTTATTTACAAAGGGTGTACAATAAATATTGTACACCGGAGTACAAGTTAACTAAAAATGTTTAAAAGTTAAGCTTATATATGTAAAAGTTATCTATTTTTTAGTGATAAATTTTTTCATTTCAGTAAAACATATTTTTCAAAACCACTAATAAGGTATAACATTAATCATCTAACCATTTCTATCTTTTTTTTACTAATATAAAAGTTACTCAAAACTAGATTAAAGTTACCAAAAAATGGATAAAAGTTATCTTGGTGTATAATAAGTTTATTGTACACCTTATGCGCGCAAGACCTTTTGGTACTTTTTTTTTCTTCTTATCCTTTTTACATTTGTTGCCAACTATAAGTTCATGTTGGTTGTGTTGCTCATTATGAGTCATACGATAATGGTTATCTAATTACTCGCTAGTCAGACTCGTAATCATAGGGGTGGCTAATTACTCACTAGTCAGACTCGTCAGCACATTTCCTAAGTCAGAGCGACACTTATTTGGCAGATGGAGTATGTGTCATTATGATTAAAATTAATATATGTTTGTAAACTTTGTTCATGATTTTCCGATTTGTCCCAAGTTTTGAGAAAACTTGCCTTATAATTAAAGTTTTATATGTACATAGAAATTTTCCTACTTAAAGAGAATCCAATCCCCAAGTCCGTTCTCATCCCGGAACTTGGTACAAAATTTAATTTCAAAATTCAAACACGAGCTCTCAAAACGGGTACCACAATTGGTCTCTGAAGCTTATTTCCAGTCAAAATGACATTAAGAAATCCAAATTCGGGCGCCGACCCACAAAACCGAGCACCCGGGCTCCGACCCGTAAAACCGAGTCCAAAACTATGCAAAATCGCGCAAATCTCCATATGTGATATGTACATGCACTCATATCAAAATCCTCATCTTCTCTATTAATTTCGAGCCAAAAATAGCAAGATTTTCTGACCAGACGAATTCTATAACTAAAATTTTGATAAGTCCGGTCTAGGAAAATTGGCCTAAAAGAATGCCCCTTAGCCCGTCATTTTTCGGGCCGGGTATAAGATGATCAGGTCTAATATTTTCCAATGACATAATTTTTATTAGTGAATGAAATAGTTAATCAATTAAAAATAGGACAAATGGGAAGCAAGAAGAAGCAGCTTGGTGTCACTAGCTTTGCTATATATGGCCTATATGGCTATATGGCTATATGGTACGACAAAGTGTTTAATGGCAAGGACTTTAGCTCCTCATGCCATCATTGCGGATAGGGTGCTTAGGCCATAGGCTTGCAGAGGACTTCAACAAGTATGCTGCTCGTATATACGGGATGACTCGATCGTAGGAAAAAGTACCAAGCTCTAACTAAGGTACGAACTACGAAGTATTAGACTATTAGAGTATTAGGTATGGCACACCTCAACTCCCTCTAATGTTGTGAAGCTGAATTGTGATGTATGTTTGGCTAATATTGTGATGTAGATCGGTTTTGATTTAGACATGATCTGCATATATCGGTTCTATTCTGGATATGAATTGTATTGATCAGTTCTGATTTGAACATATCGGTTTTGATCCGTATAAATCGATTATGATTTGGACATGATCTGATTAATGCAAAATGTTAAAATGGTGCGAGTATTTCGGGACGGAGGGAGTAAGATTTTAAGGTGTAATATTGCCACACTTGGTCACTTTGTAGGTTTTATTTGCACTCAGCATGTTTTTCTATTTTTTTTTTAATACTCCCTCCGTCCCGGAATACTTGAAACCGTTTGTCCGACACAGAGTTTAATTCATTATAATTGACTTCTTATTTAATTGAAAGGTAGTTAGTAGTGAGGTATTTTTTTAATATAGATAGTGGTATGTGGTGTCATGAATTTTCTAATGTTTATTTGGGGTAGTAAGTTGTTGGTGGGCCCTTAGGTAAGGTGAGAAAATAATAAAATATTATGTAAAGTTTCTATTTTTAGAAGCGTTTCAAGTAATACGGGACGACCCGATAAGGAAAGCGTTTCAAGTATTCCGGGACGGAGGGAGTAAAATTTAGGAGCCTCTTCTTTTCACTTGAATAAATTTTTATTTTTGTTTTTTGTCTATGTTCGAACTCCAAACCACATAGTCGCAGTGCTGTATCCCTTCTTCTGTTAAAACCCTCGAAGAAAAGCAAGCATCACCATTCACCACCTCTAGTCGGCGGCGGCTCTGCCAACCACCACTCCTTATGTGCTGCTGCTATTCTCGGTAATTTTATAGAACTATTTTGTATCGATTTTTGTTATTTTTTTTTGTATTTTGTATTGATTCAATGATGTAATTTTCTAAATTGTTAAATATATTCTGTTGGATTTTTTTGTTAACTTTGTTTTGATATGATTTTCATAAGATTGATTAGGATTACTGATTCGATTTTTTTTTGACATGGTGGGTTTCAAATTGTTAAAAGTACTTCTGCTGGTATATTTTGGTGTTGTTTTTGTCTAATTATTCTATACCCATTTCATGATTCTACTTGAAATTTGTATAATCATTTTTGATATGATTCGATTTTTCTGACAATCTCCTTGGGCACAGGCCGGCGCCCCTCCTGCTCTGCCTCAGGGACCGGCCTGAGCTTGAGAAAATGTAGGTAGTGGTGGTTTTGTTCATGAGAAGATAATGTATTTGGTCAAATTTGAACCCCTGAATCTTTAAGAGTGAAATGTCAGAAATATAGAATGCTTTCACGGTATAACTAATGAATTATGGTTTAAAACACGAAATAAGGAGCTGATAAACTTATTTCGGCGTAATGCCTCTAGTTTTTAAACATGGCCTTGTTAATTTTGGGGTTATGTTCTAGATTAACGAGTTCTTGTAATAACACTCTAGTTTTTTTTGTTTATGAATGATCTTTTTCCATGCTTTTGTTCTTGCCTTGTTTACTGATTGTTGCTGACAGAATGATCTCCATTTTGGCAGCTAGACCCTCAAATTGAGCAGGCTTTAGTAGCAATATCTTGCTTTCTAATGAGCTCTAGATCCAAAAACTTCCGTCGTCGAGCTGGTAATGATGAAGAAGATAATGAAACTAATGGTAGTGGAGTTCCATCTAAAACTACCACGAAACCATCTTTGAATAAAGCTACATCATCAGAAAAACCAAAGAAAACCCACCAAAAGCTTCTAAGTTTTGCTGAAGATGAAGAAAATGAAACACCATTTTCTCGTCCGCAAAAATCTTCTTCATCCCGTCCCTCCAAGTCCAGTTCCTCTCATCAAATTACATCTCTCAAGGACCGTCGTGGGTCTTCCTCTAGTTCACTTCCCTCTAACGTCCAACCTCAAGCTGGTCAATATACAAAAGAAGCTCTCCTTGAGCTCCAAAAGAACACTAAAACCCTTGTTAGCTCTAGGACAAGACTGCCAGCATCAGACACAAAACCTAGTTCTTCCTTGGAGCCTGTCATTGTTTTGAAAGGTCGTGTAAAACCTGTTCTGGAGACTGGGAATGATGGTGATGAGCTCAATGAAGACAACCCTGAAAAGGATGAAGAGACTGCTACCCTGAAGAGAGAGAAGGATATGGATCTCCTAGATCAAGCAACAATTAATGCCATTCGGGCTAAGAGAGAGAAACTTCGGCAATCACGGGCTGCAGCACCAGATTATATATCGTTGGATGCTGGAAGCAATCATGGAGAAGCAGAGGGGTTAAGTGACGAGGAACCAGAATTTCAAACTCGAATTGCTATGCTTGGTGAGAAGGTAGATGGTCCCAAAAAGGGTGTATTTGAAGATGTGGATGAAAGATCAGTGCGTGCTGGGCAGTTAACCATGGATGATGATGAAGACGAGGAAGAGAGAAAATGGGAAGAGGAGCAGTTTAGGAAAGGTCTGGGCAAGAGAATGGATGAAGGACCTACTGCAGTCAGCAGAAATGCATCATCAGCTCAATCTGCTCAACCTCAAAGTTATATGTACACAACACCAGAGTCTTATTCATCTGTTGCCTGTATTCCTCCTGCTGGGCCACCCAGCATTGGAGGGGCAATTGGTGGTGTACAGGGCGTTGGGACAATGTCCATTTCTCAGCAGGCTAAAATTGCCAAACTAGCTTTTCAAGATAACTTGAAGAGACTTAAGGCATGTGTCTGTTTTTGCCTAAATTTATCAATTTTTCTTGCGTAACTTGTTGACTTGAGATAATTGTTGAAGTTCCAGGGATAGATCTAGGACCTTCACAATGGATTGGCAAAATAAAATTACACTGACAATGTATTTTCTTTCTTCTACTTGTTGTTAGGTATATATGTTCTTAAATGTGTGTAATCAACCATAGCACTATAACCATAACCCCAATCATTATCACCCCATCCCAAATGAATAGGTGATTGTATTATTGTTTAAAATCTTTTGGGAAGTTAGAAAAGTGAGAGTATTCCCCTATGGTTGGGTCACTTGCGTGGGTTGGCTAGTGGCTACTCGTGTTTCTTGCTGGATTTGATTGTTCAATATTTAGCCTTTGGGCTAGGGCTTCTTCTGCTGCTTTTTCCCCCGTTCCCCCTTAGCTTACTAGTTCTATCCTTTCCGGCCTGATTTTCATCAGATAAAGAAATAAAATAATACCTCGTAATAAGGGCTGTTGGAAATTACGACCTTGTGCAAATATATGCTAATCCAGATTACAGCTTTTTTGGTCAAGTCTTATGCTTGATAAGAAATTTTTCCATCTTATAATAAGTGTAAAGCTTGGCTGTTCTGTCCCTTCCATCTTTAATTTGCAGTCAACCTGTAATAGAACTTATTTGTGTTAAAGAGCCAACTTGCGGCGTCATGCTGTTATTAATTTTTTCCGGGGTATTTGGTATCTGTTTCCACACACCTTTAATGCTTATGAACTATAATTTTTTTTGTTCTTCGCTATGTTGTACAAGGGATGGCTTTTTTTGTTCTCATACATTTTTCTTGATTTCTGCCCCCTTCTTTGTTTCCAGGAAACTCATGTAAAAACGATGACTTCATTGGCTCGTGTTGATGAAAGTTTATCTGCATCATTGGTGAATATCACTGTACTTGAGAAGTCTTCATCTGATGCTGGAGAGAAGTATATTTTCATGCAAAGGCTCCGTGACTTTGTTTCTGTTATATGTGACTTTTTGCAGGTATAG

mRNA sequence

ATGTGGCAGCTAGACCCTCAAATTGAGCAGGCTTTAGTAGCAATATCTTGCTTTCTAATGAGCTCTAGATCCAAAAACTTCCGTCGTCGAGCTGGTAATGATGAAGAAGATAATGAAACTAATGGTAGTGGAGTTCCATCTAAAACTACCACGAAACCATCTTTGAATAAAGCTACATCATCAGAAAAACCAAAGAAAACCCACCAAAAGCTTCTAAGTTTTGCTGAAGATGAAGAAAATGAAACACCATTTTCTCGTCCGCAAAAATCTTCTTCATCCCGTCCCTCCAAGTCCAGTTCCTCTCATCAAATTACATCTCTCAAGGACCGTCGTGGGTCTTCCTCTAGTTCACTTCCCTCTAACGTCCAACCTCAAGCTGGTCAATATACAAAAGAAGCTCTCCTTGAGCTCCAAAAGAACACTAAAACCCTTGTTAGCTCTAGGACAAGACTGCCAGCATCAGACACAAAACCTAGTTCTTCCTTGGAGCCTGTCATTGTTTTGAAAGGTCGTGTAAAACCTGTTCTGGAGACTGGGAATGATGGTGATGAGCTCAATGAAGACAACCCTGAAAAGGATGAAGAGACTGCTACCCTGAAGAGAGAGAAGGATATGGATCTCCTAGATCAAGCAACAATTAATGCCATTCGGGCTAAGAGAGAGAAACTTCGGCAATCACGGGCTGCAGCACCAGATTATATATCGTTGGATGCTGGAAGCAATCATGGAGAAGCAGAGGGGTTAAGTGACGAGGAACCAGAATTTCAAACTCGAATTGCTATGCTTGGTGAGAAGGTAGATGGTCCCAAAAAGGGTGTATTTGAAGATGTGGATGAAAGATCAGTGCGTGCTGGGCAGTTAACCATGGATGATGATGAAGACGAGGAAGAGAGAAAATGGGAAGAGGAGCAGTTTAGGAAAGGTCTGGGCAAGAGAATGGATGAAGGACCTACTGCAGTCAGCAGAAATGCATCATCAGCTCAATCTGCTCAACCTCAAAGTTATATGTACACAACACCAGAGTCTTATTCATCTGTTGCCTGTATTCCTCCTGCTGGGCCACCCAGCATTGGAGGGGCAATTGGTGGTGTACAGGGCGTTGGGACAATGTCCATTTCTCAGCAGGCTAAAATTGCCAAACTAGCTTTTCAAGATAACTTGAAGAGACTTAAGGAAACTCATGTAAAAACGATGACTTCATTGGCTCGTGTTGATGAAAGTTTATCTGCATCATTGGTGAATATCACTGTACTTGAGAAGTCTTCATCTGATGCTGGAGAGAAGTATATTTTCATGCAAAGGCTCCGTGACTTTGTTTCTGTTATATGTGACTTTTTGCAGGTATAG

Coding sequence (CDS)

ATGTGGCAGCTAGACCCTCAAATTGAGCAGGCTTTAGTAGCAATATCTTGCTTTCTAATGAGCTCTAGATCCAAAAACTTCCGTCGTCGAGCTGGTAATGATGAAGAAGATAATGAAACTAATGGTAGTGGAGTTCCATCTAAAACTACCACGAAACCATCTTTGAATAAAGCTACATCATCAGAAAAACCAAAGAAAACCCACCAAAAGCTTCTAAGTTTTGCTGAAGATGAAGAAAATGAAACACCATTTTCTCGTCCGCAAAAATCTTCTTCATCCCGTCCCTCCAAGTCCAGTTCCTCTCATCAAATTACATCTCTCAAGGACCGTCGTGGGTCTTCCTCTAGTTCACTTCCCTCTAACGTCCAACCTCAAGCTGGTCAATATACAAAAGAAGCTCTCCTTGAGCTCCAAAAGAACACTAAAACCCTTGTTAGCTCTAGGACAAGACTGCCAGCATCAGACACAAAACCTAGTTCTTCCTTGGAGCCTGTCATTGTTTTGAAAGGTCGTGTAAAACCTGTTCTGGAGACTGGGAATGATGGTGATGAGCTCAATGAAGACAACCCTGAAAAGGATGAAGAGACTGCTACCCTGAAGAGAGAGAAGGATATGGATCTCCTAGATCAAGCAACAATTAATGCCATTCGGGCTAAGAGAGAGAAACTTCGGCAATCACGGGCTGCAGCACCAGATTATATATCGTTGGATGCTGGAAGCAATCATGGAGAAGCAGAGGGGTTAAGTGACGAGGAACCAGAATTTCAAACTCGAATTGCTATGCTTGGTGAGAAGGTAGATGGTCCCAAAAAGGGTGTATTTGAAGATGTGGATGAAAGATCAGTGCGTGCTGGGCAGTTAACCATGGATGATGATGAAGACGAGGAAGAGAGAAAATGGGAAGAGGAGCAGTTTAGGAAAGGTCTGGGCAAGAGAATGGATGAAGGACCTACTGCAGTCAGCAGAAATGCATCATCAGCTCAATCTGCTCAACCTCAAAGTTATATGTACACAACACCAGAGTCTTATTCATCTGTTGCCTGTATTCCTCCTGCTGGGCCACCCAGCATTGGAGGGGCAATTGGTGGTGTACAGGGCGTTGGGACAATGTCCATTTCTCAGCAGGCTAAAATTGCCAAACTAGCTTTTCAAGATAACTTGAAGAGACTTAAGGAAACTCATGTAAAAACGATGACTTCATTGGCTCGTGTTGATGAAAGTTTATCTGCATCATTGGTGAATATCACTGTACTTGAGAAGTCTTCATCTGATGCTGGAGAGAAGTATATTTTCATGCAAAGGCTCCGTGACTTTGTTTCTGTTATATGTGACTTTTTGCAGGTATAG

Protein sequence

MWQLDPQIEQALVAISCFLMSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKLLSFAEDEENETPFSRPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTKEALLELQKNTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDELNEDNPEKDEETATLKREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSVRAGQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPTAVSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFVSVICDFLQV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo13247	Spo13247	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo13247.1	Spo13247.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13247.1.exon.1	Spo13247.1.exon.1	exon
Spo13247.1.exon.2	Spo13247.1.exon.2	exon
Spo13247.1.exon.3	Spo13247.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13247.1.CDS.1	Spo13247.1.CDS.1	CDS
Spo13247.1.CDS.2	Spo13247.1.CDS.2	CDS
Spo13247.1.CDS.3	Spo13247.1.CDS.3	CDS

Homology

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BLAST of Spo13247.1 vs. NCBI nr
Match: gi|902166786|gb|KNA07271.1| (hypothetical protein SOVF_173440, partial [Spinacia oleracea])

HSP 1 Score: 788.1 bits (2034), Expect = 8.100e-225
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1


		  
Query: 20  MSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKLLSFAEDEE 79
           MSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKLLSFAEDEE
Sbjct: 1   MSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKLLSFAEDEE 60

Query: 80  NETPFSRPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTKEALLELQK 139
           NETPFSRPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTKEALLELQK
Sbjct: 61  NETPFSRPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTKEALLELQK 120

Query: 140 NTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDELNEDNPEKDEETATL 199
           NTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDELNEDNPEKDEETATL
Sbjct: 121 NTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDELNEDNPEKDEETATL 180

Query: 200 KREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRI 259
           KREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRI
Sbjct: 181 KREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRI 240

Query: 260 AMLGEKVDGPKKGVFEDVDERSVRAGQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPTA 319
           AMLGEKVDGPKKGVFEDVDERSVRAGQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPTA
Sbjct: 241 AMLGEKVDGPKKGVFEDVDERSVRAGQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPTA 300

Query: 320 VSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIA 379
           VSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIA
Sbjct: 301 VSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIA 360

Query: 380 KLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFV 439
           KLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFV
Sbjct: 361 KLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFV 420

Query: 440 SVICDFLQ 448
           SVICDFLQ
Sbjct: 421 SVICDFLQ 428

[Close]

BLAST of Spo13247.1 vs. NCBI nr
Match: gi|731351490|ref|XP_010687066.1| (PREDICTED: LOW QUALITY PROTEIN: PAX3- and PAX7-binding protein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 615.5 bits (1586), Expect = 7.200e-173
Identity = 347/449 (77.28%), Postives = 387/449 (86.19%), Query Frame = 1


		  
Query: 13  VAISCFLMSSRSKNFRRRAGNDE-EDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKL 72
           +AI    MSSRSKNFRRRAG+DE E++E NGSGVPSK +TKPS  K T+ +KPKK+HQKL
Sbjct: 1   MAIFDISMSSRSKNFRRRAGDDENEESEANGSGVPSKASTKPSFGKTTAVDKPKKSHQKL 60

Query: 73  LSFAEDEENETPFSRPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTK 132
           LSFA DE+NETPFSRP+K+S+SRPSKS+SSH+ITS+KDR GSS+ S+ SNVQPQAGQYTK
Sbjct: 61  LSFAADEDNETPFSRPRKTSASRPSKSTSSHKITSIKDRLGSSTCSVTSNVQPQAGQYTK 120

Query: 133 EALLELQKNTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDELNEDNPE 192
           EALLELQKNTKTL SSR R   SDT+PSS+ EPVIVLKG VKPV ETG DG+E+NED   
Sbjct: 121 EALLELQKNTKTLASSRPRPTNSDTQPSSTSEPVIVLKGLVKPVGETGKDGNEMNEDKTS 180

Query: 193 KDEETATLKREKD--------MDL----LDQATINAIRAKREKLRQSRAAAPDYISLDAG 252
           +DE+T+ LKREKD        M +    +DQATINAIRA+RE+LR SRAAAPD+ISLDAG
Sbjct: 181 RDEDTSYLKREKDDAERRIGLMGIGKGEVDQATINAIRAERERLRLSRAAAPDFISLDAG 240

Query: 253 SNHGEAEGLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSVRAGQLTMDDDEDEEERK 312
           SNHGEAEGLSDEEPEFQTRIAMLGEK+DGPKKGVFED+DER +R GQL MDDDEDEEERK
Sbjct: 241 SNHGEAEGLSDEEPEFQTRIAMLGEKIDGPKKGVFEDIDERPMRIGQLNMDDDEDEEERK 300

Query: 313 WEEEQFRKGLGKRMDEGPTAVSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGG 372
           WEEEQFRKGLGKRMDEGP+AVSRNAS+ QS QPQSYMYT P SYSSV+   PAG P + G
Sbjct: 301 WEEEQFRKGLGKRMDEGPSAVSRNASAVQSVQPQSYMYTAPTSYSSVS-HDPAGHPVLEG 360

Query: 373 AIGGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLE 432
            +GGVQGVGTMSISQQAKI + AFQDNLKRLKETH KT TSL RVDESL+ASL+NITVLE
Sbjct: 361 ELGGVQGVGTMSISQQAKITRQAFQDNLKRLKETHGKTRTSLDRVDESLTASLMNITVLE 420

Query: 433 KSSSDAGEKYIFMQRLRDFVSVICDFLQV 449
           KSS DAGEKYIFMQRLRDFVSVICDFLQV
Sbjct: 421 KSSCDAGEKYIFMQRLRDFVSVICDFLQV 448

[Close]

BLAST of Spo13247.1 vs. NCBI nr
Match: gi|731370629|ref|XP_010647970.1| (PREDICTED: PAX3- and PAX7-binding protein 1 [Vitis vinifera])

HSP 1 Score: 405.6 bits (1041), Expect = 1.100e-109
Identity = 266/463 (57.45%), Postives = 326/463 (70.41%), Query Frame = 1


		  
Query: 20  MSSRSKNFRRRAGNDEEDNETNGSGVPS-KTTTKPSLNKATSSE--KPKKTHQKLLSFAE 79
           MSSR +NFRRRA +D+ D +TNG G P  K T+KPS   AT++   KPKK   KLLSFA+
Sbjct: 1   MSSRPRNFRRRADDDDND-DTNGDGPPLIKPTSKPSTTTATTAAAAKPKKP-PKLLSFAD 60

Query: 80  DEENETPFSRPQKSSS--SRPSK---------SSSSHQITSLKDRRGSSSSSLPSNVQPQ 139
           DEENE+P     +S+   SRPSK         SSSSH+IT+ KDR   SS+SLPSNVQPQ
Sbjct: 61  DEENESPSRSSSRSTQPPSRPSKTSSRFTKLSSSSSHKITTTKDRLTPSSASLPSNVQPQ 120

Query: 140 AGQYTKEALLELQKNTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGN---DG 199
           AG YTKEAL ELQKNT+TL SSR   PAS ++P  SLEPVIVLKG VKP+    +   D 
Sbjct: 121 AGTYTKEALRELQKNTRTLASSR---PAS-SEPKPSLEPVIVLKGLVKPISAAEDAVIDE 180

Query: 200 DELNEDNPEKDEETATLKREKDM---------------DLLDQATINAIRAKREKLRQSR 259
           + + E+   KD+   + K++K+                 + DQATINAIRAKRE+LRQSR
Sbjct: 181 ENVEEEPESKDKGGRSFKKDKEDTETRLASMGIGKGRDSIPDQATINAIRAKRERLRQSR 240

Query: 260 AAAPDYISLDAGSNHGEAEGLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSVRAG-- 319
           AAAPDYISLD GSNHG AEGLSDEEPEFQ RIAM GEK +  KKGVFEDVDER +  G  
Sbjct: 241 AAAPDYISLDGGSNHGAAEGLSDEEPEFQGRIAMFGEKPESGKKGVFEDVDERGMEGGFK 300

Query: 320 QLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPT-AVSRNASSAQSAQPQSYMYTTPESYS 379
           +   D D++EEE+ WEEEQFRKGLGKRMD+G +  VS +    Q  Q Q +MY++  +Y+
Sbjct: 301 KDAHDSDDEEEEKIWEEEQFRKGLGKRMDDGSSRVVSSSVPVVQKVQQQKFMYSSVTAYT 360

Query: 380 SVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTMTSLARV 439
           SV  +  + P +IGGA+G + G   MS+SQQA++AK A  +NL+RLKE+H +TM+SL R 
Sbjct: 361 SVPGV--SAPLNIGGAVGPLPGFDAMSLSQQAELAKKALHENLRRLKESHGRTMSSLTRT 420

Query: 440 DESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFVSVICDFLQ 448
           DE+LS+SL NIT LEKS + AGEK+IFMQ LRDFVSVICDFLQ
Sbjct: 421 DENLSSSLSNITTLEKSLTAAGEKFIFMQXLRDFVSVICDFLQ 455

[Close]

BLAST of Spo13247.1 vs. NCBI nr
Match: gi|297737868|emb|CBI27069.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 383.6 bits (984), Expect = 4.600e-103
Identity = 252/432 (58.33%), Postives = 312/432 (72.22%), Query Frame = 1


		  
Query: 20  MSSRSKNFRRRAGNDEEDNETNGSGVPS-KTTTKPSLNKATSSE--KPKKTHQKLLSFAE 79
           MSSR +NFRRRA +D+ D +TNG G P  K T+KPS   AT++   KPKK   KLLSFA+
Sbjct: 1   MSSRPRNFRRRADDDDND-DTNGDGPPLIKPTSKPSTTTATTAAAAKPKKP-PKLLSFAD 60

Query: 80  DEENETPFSRPQKSSS--SRPSK---------SSSSHQITSLKDRRGSSSSSLPSNVQPQ 139
           DEENE+P     +S+   SRPSK         SSSSH+IT+ KDR   SS+SLPSNVQPQ
Sbjct: 61  DEENESPSRSSSRSTQPPSRPSKTSSRFTKLSSSSSHKITTTKDRLTPSSASLPSNVQPQ 120

Query: 140 AGQYTKEALLELQKNTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDEL 199
           AG YTKEAL ELQKNT+TL SSR   PAS ++P  SLEPVIVLKG VKP+  +  +   +
Sbjct: 121 AGTYTKEALRELQKNTRTLASSR---PAS-SEPKPSLEPVIVLKGLVKPI--SAAEDAVI 180

Query: 200 NEDNPEKDEETATLKREKDMDLL-DQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGE 259
           +E+N + +   A++   K  D + DQATINAIRAKRE+LRQSRAAAPDYISLD GSNHG 
Sbjct: 181 DEENEDTETRLASMGIGKGRDSIPDQATINAIRAKRERLRQSRAAAPDYISLDGGSNHGA 240

Query: 260 AEGLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSVRAG--QLTMDDDEDEEERKWEE 319
           AEGLSDEEPEFQ RIAM GEK +  KKGVFEDVDER +  G  +   D D++EEE+ WEE
Sbjct: 241 AEGLSDEEPEFQGRIAMFGEKPESGKKGVFEDVDERGMEGGFKKDAHDSDDEEEEKIWEE 300

Query: 320 EQFRKGLGKRMDEGPT-AVSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGGAI 379
           EQFRKGLGKRMD+G +  VS +    Q  Q Q +MY++  +Y+SV  +  + P +IGGA+
Sbjct: 301 EQFRKGLGKRMDDGSSRVVSSSVPVVQKVQQQKFMYSSVTAYTSVPGV--SAPLNIGGAV 360

Query: 380 GGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLEKS 434
           G + G   MS+SQQA++AK A  +NL+RLKE+H +TM+SL R DE+LS+SL NIT LEKS
Sbjct: 361 GPLPGFDAMSLSQQAELAKKALHENLRRLKESHGRTMSSLTRTDENLSSSLSNITTLEKS 420

[Close]

BLAST of Spo13247.1 vs. NCBI nr
Match: gi|645276184|ref|XP_008243166.1| (PREDICTED: PAX3- and PAX7-binding protein 1 [Prunus mume])

HSP 1 Score: 374.0 bits (959), Expect = 3.600e-100
Identity = 255/470 (54.26%), Postives = 317/470 (67.45%), Query Frame = 1


		  
Query: 20  MSSRSKNFRRRAGNDEEDNET-NGSGVPSKT-TTKPSLNKATSSEKPKKTHQ---KLLSF 79
           MSSR++NFRRRA +D++ N+  N +G P+   T K S   ++SS KPKK H    KLLSF
Sbjct: 1   MSSRARNFRRRADDDDDKNDDPNDTGTPATIPTVKSSSKPSSSSSKPKKPHNQAPKLLSF 60

Query: 80  AEDEENETPFSRPQKSSSSRPS----KSSSSHQITSLKDRRGSSSS---SLPSNVQPQAG 139
            +DEE+    SR   S   +PS    K SS+H++T+LKDR   +SS   SLPSNVQPQAG
Sbjct: 61  VDDEESAAAPSRSSSSKPDKPSSRLGKPSSAHKMTALKDRLAHTSSVSTSLPSNVQPQAG 120

Query: 140 QYTKEALLELQKNTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKP---VLETGNDGDE 199
            YTKEAL ELQKNT+TL SSR         PSS  EP IVLKG VKP   + +T  +  E
Sbjct: 121 TYTKEALRELQKNTRTLASSR---------PSS--EPTIVLKGLVKPTGTISDTLREARE 180

Query: 200 LNEDNPEKDE-ETATL-KREKD----------MDLL--------DQATINAIRAKREKLR 259
           L+ DN E+ E E A+L +R+KD          +D          DQATINAIRAKRE+LR
Sbjct: 181 LDSDNDEEQEKERASLFRRDKDDAEARLASMGIDKAKGSSGLFPDQATINAIRAKRERLR 240

Query: 260 QSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERS--- 319
           +SRAAAPD+ISLD+GSNHG AEGLSDEEPEF+ RIAM G+ ++G KKGVFEDVD+R+   
Sbjct: 241 KSRAAAPDFISLDSGSNHGAAEGLSDEEPEFRGRIAMFGDNMEGSKKGVFEDVDDRAADT 300

Query: 320 -VRAGQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPT--AVSRNASSAQSAQPQSYMYT 379
            +R   +  D+DEDEEE+ WEEEQFRKGLGKRMD+G +   VS +A   QS       Y+
Sbjct: 301 VLRQESIDRDEDEDEEEKIWEEEQFRKGLGKRMDDGSSIGVVSTSAPVVQSVPQPKANYS 360

Query: 380 TPESYSSVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTM 439
               YSSV  +P    PSIGG IG  QG   MSI  QA+IAK A ++N+ +LKE+H +TM
Sbjct: 361 AMAGYSSVQSVPVG--PSIGGVIGASQGSNVMSIKAQAEIAKKALEENVMKLKESHGRTM 420

Query: 440 TSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFVSVICDFLQV 449
            SL + DE+LS+SL+N+T LEKS S A EKY F Q+LRDFVSV+C+FLQV
Sbjct: 421 LSLTKTDENLSSSLLNVTALEKSLSAADEKYKFTQKLRDFVSVLCNFLQV 457

[Close]

BLAST of Spo13247.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QL18_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_173440 PE=4 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 5.600e-225
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1


		  
Query: 20  MSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKLLSFAEDEE 79
           MSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKLLSFAEDEE
Sbjct: 1   MSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKLLSFAEDEE 60

Query: 80  NETPFSRPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTKEALLELQK 139
           NETPFSRPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTKEALLELQK
Sbjct: 61  NETPFSRPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTKEALLELQK 120

Query: 140 NTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDELNEDNPEKDEETATL 199
           NTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDELNEDNPEKDEETATL
Sbjct: 121 NTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGNDGDELNEDNPEKDEETATL 180

Query: 200 KREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRI 259
           KREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRI
Sbjct: 181 KREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRI 240

Query: 260 AMLGEKVDGPKKGVFEDVDERSVRAGQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPTA 319
           AMLGEKVDGPKKGVFEDVDERSVRAGQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPTA
Sbjct: 241 AMLGEKVDGPKKGVFEDVDERSVRAGQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPTA 300

Query: 320 VSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIA 379
           VSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIA
Sbjct: 301 VSRNASSAQSAQPQSYMYTTPESYSSVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIA 360

Query: 380 KLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFV 439
           KLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFV
Sbjct: 361 KLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFV 420

Query: 440 SVICDFLQ 448
           SVICDFLQ
Sbjct: 421 SVICDFLQ 428

[Close]

BLAST of Spo13247.1 vs. UniProtKB/TrEMBL
Match: F6HF14_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02980 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.500e-102
Identity = 253/449 (56.35%), Postives = 313/449 (69.71%), Query Frame = 1


		  
Query: 20  MSSRSKNFRRRAGNDEEDNETNGSGVPS-KTTTKPSLNKATSSE--KPKKTHQKLLSFAE 79
           MSSR +NFRRRA +D+ D +TNG G P  K T+KPS   AT++   KPKK   KLLSFA+
Sbjct: 1   MSSRPRNFRRRADDDDND-DTNGDGPPLIKPTSKPSTTTATTAAAAKPKKP-PKLLSFAD 60

Query: 80  DEENETPFSRPQKSSS--SRPSK---------SSSSHQITSLKDRRGSSSSSLPSNVQPQ 139
           DEENE+P     +S+   SRPSK         SSSSH+IT+ KDR   SS+SLPSNVQPQ
Sbjct: 61  DEENESPSRSSSRSTQPPSRPSKTSSRFTKLSSSSSHKITTTKDRLTPSSASLPSNVQPQ 120

Query: 140 AGQYTKEALLELQKNTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPVLETGN---DG 199
           AG YTKEAL ELQKNT+TL SSR   PAS ++P  SLEPVIVLKG VKP+    +   D 
Sbjct: 121 AGTYTKEALRELQKNTRTLASSR---PAS-SEPKPSLEPVIVLKGLVKPISAAEDAVIDE 180

Query: 200 DELNEDNPEKDEETATLKREKDM---------------DLLDQATINAIRAKREKLRQSR 259
           + + E+   KD+   + K++K+                 + DQATINAIRAKRE+LRQSR
Sbjct: 181 ENVEEEPESKDKGGRSFKKDKEDTETRLASMGIGKGRDSIPDQATINAIRAKRERLRQSR 240

Query: 260 AAAPDYISLDAGSNHGEAEGLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSVRAG-- 319
           AAAPDYISLD GSNHG AEGLSDEEPEFQ RIAM GEK +  KKGVFEDVDER +  G  
Sbjct: 241 AAAPDYISLDGGSNHGAAEGLSDEEPEFQGRIAMFGEKPESGKKGVFEDVDERGMEGGFK 300

Query: 320 QLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPT-AVSRNASSAQSAQPQSYMYTTPESYS 379
           +   D D++EEE+ WEEEQFRKGLGKRMD+G +  VS +    Q  Q Q +MY++  +Y+
Sbjct: 301 KDAHDSDDEEEEKIWEEEQFRKGLGKRMDDGSSRVVSSSVPVVQKVQQQKFMYSSVTAYT 360

Query: 380 SVACIPPAGPPSIGGAIGGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTMTSLARV 434
           SV  +  + P +IGGA+G + G   MS+SQQA++AK A  +NL+RLKE+H +TM+SL R 
Sbjct: 361 SVPGV--SAPLNIGGAVGPLPGFDAMSLSQQAELAKKALHENLRRLKESHGRTMSSLTRT 420

[Close]

BLAST of Spo13247.1 vs. UniProtKB/TrEMBL
Match: A0A059A010_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00868 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.600e-99
Identity = 250/453 (55.19%), Postives = 309/453 (68.21%), Query Frame = 1


		  
Query: 19  LMSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSE---KPKKTHQ-KLLSF 78
           + SSR+KNFRRRAG+DE+D + + +G  +  T  PS + A  ++   KPKK    KLLSF
Sbjct: 1   MSSSRAKNFRRRAGDDEDDGDES-AGAAATATKIPSKSTAAVTKVAPKPKKPQAPKLLSF 60

Query: 79  AEDEENETPFSRPQKSSSSRPSK---SSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTK 138
           A+DE N     RP+   SSRPSK   SSSSH+I+SLKDR+   ++ LPSNV PQAG YT+
Sbjct: 61  ADDEGNGETQPRPRSKPSSRPSKPLSSSSSHRISSLKDRQ-VPATPLPSNVLPQAGTYTR 120

Query: 139 EALLELQKNTKTLVSSRTR--LPASDTKPSSSLEPVIVLKGRVKP--VLETGNDGDELNE 198
           EAL ELQKNT+TL SS +     AS++KP    EPVIV KG V+P  V +T    DEL+ 
Sbjct: 121 EALRELQKNTRTLASSSSSRYAAASESKPDPKPEPVIVWKGLVRPNAVEQTLKQVDELSS 180

Query: 199 DNPEKDEETATLKREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAEG 258
           D  E++ E    +        DQA INAIRAKRE+LRQS AAAPDYISLD GSNHG AEG
Sbjct: 181 D--EEEGEKGKGQDSSGSSFPDQAMINAIRAKRERLRQSGAAAPDYISLDGGSNHGAAEG 240

Query: 259 LSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSVRA---GQLTMDDDEDEEERKWEEEQ 318
           LSDEEPEFQ RIAM GEK++G KKGVFE  D+++V A       ++DDEDEEE+ WEEEQ
Sbjct: 241 LSDEEPEFQGRIAMFGEKIEGGKKGVFESFDDKAVDAPLRKGTELEDDEDEEEKIWEEEQ 300

Query: 319 FRKGLGKRMDEGPTAVSRNASSAQSA-------QPQSYMYT-TPESYSSVACIPPAG--P 378
           FRKGLGKR+D+G T    + S+  +        QPQ Y YT +   Y     I  A   P
Sbjct: 301 FRKGLGKRLDDGTTRGVTSTSNISAVPVVPNVQQPQKYAYTASAAGYGPAPSIGAAAPPP 360

Query: 379 PSIGGAIGGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTMTSLARVDESLSASLVN 438
           PSIGGA+   QG+  MSI QQA++A  A  DN +RLKE+H KTM+SLA+ DE+LS+SL+N
Sbjct: 361 PSIGGAMVAGQGLDDMSIPQQAELAMKALSDNARRLKESHSKTMSSLAKTDENLSSSLLN 420

Query: 439 ITVLEKSSSDAGEKYIFMQRLRDFVSVICDFLQ 448
           IT LEKS S AGEKYIFMQ+L +++SVIC FLQ
Sbjct: 421 ITTLEKSLSAAGEKYIFMQKLHEYISVICKFLQ 449

[Close]

BLAST of Spo13247.1 vs. UniProtKB/TrEMBL
Match: A0A059BFV8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02350 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.800e-99
Identity = 254/477 (53.25%), Postives = 313/477 (65.62%), Query Frame = 1


		  
Query: 19  LMSSRSKNFRRRAGNDEEDNETNG--SGVPSKTTTKPSLNKATSSEKPKKTHQ-KLLSFA 78
           + SSR+KNFRRRAG+DE+D++ +   + + +K  +K +        KPKK    KLLSFA
Sbjct: 1   MSSSRAKNFRRRAGDDEDDDDESNRAAAIATKIPSKSTAAVTKVPPKPKKPQAPKLLSFA 60

Query: 79  EDEENETPFSRPQKSSSSRPSK---SSSSHQITSLKDRRGSSSSSLPSNVQPQAGQYTKE 138
           +DE N     R +   SSRPSK   SSSSH+I+SLKDR+   ++ LPSNV PQAG YTKE
Sbjct: 61  DDEGNNETQPRSRSKPSSRPSKPLSSSSSHKISSLKDRQ-LPATPLPSNVFPQAGTYTKE 120

Query: 139 ALLELQKNTKTLVSSRTR--LPASDTKPSSSLEPVIVLKGRVKP--VLETGNDGDELNED 198
           AL ELQKNT+TL SS +     AS++KP    EPVIVLKG VKP  V +T    DEL+ D
Sbjct: 121 ALRELQKNTRTLASSSSSRYAAASESKPDPKPEPVIVLKGLVKPDAVEQTLKQVDELSSD 180

Query: 199 NPEKDEETATLKREKDMDLL-------------------------DQATINAIRAKREKL 258
             E++ E   +  EK   L                          DQA INAIRAKRE+L
Sbjct: 181 --EEEGERGKVLEEKREGLYRDDAERRLAAIGIAKGQDSSGSSFPDQAMINAIRAKRERL 240

Query: 259 RQSRAAAPDYISLDAGSNHGEAEGLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSVR 318
           R+SRAAAPDYISLD GSNHG AEGLSDEEPEFQ RIAM GEK++G KKGVFE  D+++V 
Sbjct: 241 RKSRAAAPDYISLDGGSNHGAAEGLSDEEPEFQGRIAMFGEKIEGGKKGVFESFDDKAVD 300

Query: 319 A---GQLTMDDDEDEEERKWEEEQFRKGLGKRMDEGPTAVSRNASSAQSA-------QPQ 378
           A       ++DDEDEEE+ WEEEQFRKGLGKRMD+G T    + S+  +        QPQ
Sbjct: 301 APLRKGTELEDDEDEEEKIWEEEQFRKGLGKRMDDGTTRGVTSTSNISAVPVVPNVQQPQ 360

Query: 379 SYMYT-TPESYSSVACIPPAG--PPSIGGAIGGVQGVGTMSISQQAKIAKLAFQDNLKRL 438
            Y YT +   Y     I  A   PPSIGGA+   QG+  MSI QQA++A  A  DN +RL
Sbjct: 361 KYAYTASAAGYGPAPSIGAAAPPPPSIGGAMVAGQGLDVMSIPQQAELAMKALCDNARRL 420

Query: 439 KETHVKTMTSLARVDESLSASLVNITVLEKSSSDAGEKYIFMQRLRDFVSVICDFLQ 448
           +E+H+KTM+SLA+ DE+LS+SL+NIT LEKS S AGEKYIFMQ+LRD++SVIC FLQ
Sbjct: 421 EESHIKTMSSLAKTDENLSSSLLNITALEKSLSAAGEKYIFMQKLRDYISVICKFLQ 474

[Close]

BLAST of Spo13247.1 vs. UniProtKB/TrEMBL
Match: I1NDJ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G028100 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.900e-95
Identity = 247/449 (55.01%), Postives = 311/449 (69.27%), Query Frame = 1


		  
Query: 19  LMSSRSKNFRRRAGNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQ--KLLSFAE 78
           + +++S+NFRRR G+D E N+ N     S  TT PS  K  SS KPKK  Q  KLLSFA+
Sbjct: 1   MSTAKSRNFRRRGGDDTESNDDNDGDTTS--TTLPS--KPPSSAKPKKKPQAPKLLSFAD 60

Query: 79  DEENETPFSRPQKSSSSRPS----KSSSSHQITSLKDRRGSSSS-SLPSNVQPQAGQYTK 138
           DE+      RP+ S   R +    K SSSH+IT+LKDR   +SS S+P+NVQPQAG YTK
Sbjct: 61  DEDETDENPRPRASKPHRTAATAKKPSSSHKITTLKDRIAHTSSPSVPTNVQPQAGTYTK 120

Query: 139 EALLELQKNTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKPV-LET-GNDGDELNE-D 198
           EAL ELQKNT+TLVSS +    SD KPSS  EPVIVLKG VKP+  ET G D D  +E +
Sbjct: 121 EALRELQKNTRTLVSSSSS--RSDPKPSS--EPVIVLKGHVKPLGPETQGRDSDSDSEGE 180

Query: 199 NPEKDEETAT--LKREKDMDLLDQATINAIRAKREKLRQSRAAAPDYISLDAGSNHGEAE 258
           + E + + AT  ++ ++D    D+ TI AIRAKRE+LR +R AAPDYISLD GSNHG AE
Sbjct: 181 HREVEAKLATVGIQNKEDSFYPDEETIRAIRAKRERLRLARPAAPDYISLDGGSNHGAAE 240

Query: 259 GLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSV----RAG-QLTMDDDEDEEERKWE 318
           GLSDEEPEF+ RIAM GEKVDG KKGVFE+V+ER V    + G +  +DDD+DEEE+ WE
Sbjct: 241 GLSDEEPEFRGRIAMFGEKVDGGKKGVFEEVEERRVDLRFKGGEEEVLDDDDDEEEKMWE 300

Query: 319 EEQFRKGLGKRMDEGPTAVSRNASSAQSAQPQSYMYTTPESYSSVACIPPAG---PPSIG 378
           EEQFRKGLGKRMDEG   V   A++ Q AQ Q + +  P +      +P A     PSIG
Sbjct: 301 EEQFRKGLGKRMDEGSARVDVAAAAVQGAQLQ-HNFVVPSAAKVYGAVPSAAASVSPSIG 360

Query: 379 GAIGGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTMTSLARVDESLSASLVNITVL 438
           GAI  +  +  + ISQQA+ A+ A  +N++RLKE+H +TM+SL++ DE+LSASL+NIT L
Sbjct: 361 GAIESLPVLDVVPISQQAEAARKALLENVRRLKESHGRTMSSLSKTDENLSASLLNITAL 420

Query: 439 EKSSSDAGEKYIFMQRLRDFVSVICDFLQ 448
           E S   A EKY FMQ+LR++V+ ICDFLQ
Sbjct: 421 ENSLVVADEKYRFMQKLRNYVTNICDFLQ 440

[Close]

BLAST of Spo13247.1 vs. TAIR (Arabidopsis)
Match: AT5G08550.1 (GC-rich sequence DNA-binding factor-like protein)

HSP 1 Score: 257.3 bits (656), Expect = 1.700e-68
Identity = 203/456 (44.52%), Postives = 267/456 (58.55%), Query Frame = 1


		  
Query: 21  SSRSKNFRRRA--GNDEEDNETNGSGVPSKTTTKPSLNKATSSEKPKKTHQKLLSFAEDE 80
           S+R KNFRRR   G DE D +         +T   S  K  S+  PKK   KLLSFA+DE
Sbjct: 3   SNRPKNFRRRGDDGGDEIDGKVATPSSKPTSTLSSSKPKTLSASAPKK---KLLSFADDE 62

Query: 81  ENETPFS----------RPQKSSSSRPSKSSSSHQITSLKDRRGSSSSSLPSNVQPQAGQ 140
           E E   +          R +  SSSR   S SSH+ +S K+RR +S     SNV PQAG 
Sbjct: 63  EEEEDGAPRVTIKPKNGRDRVKSSSRLGVSGSSHRHSSTKERRPAS-----SNVLPQAGS 122

Query: 141 YTKEALLELQKNTKTLVSSRTRLPASDTKPSSSLEPVIVLKGRVKP-----------VLE 200
           Y+KEALLELQKNT+TL  SR+         S++ EP +VLKG +KP           V++
Sbjct: 123 YSKEALLELQKNTRTLPYSRS---------SANAEPKVVLKGLIKPPQDHEQQSLKDVVK 182

Query: 201 TGNDGDELNEDNPEKDEETATLKREKDMDLLDQATINAIRAKREKLRQSRAA-APDYISL 260
             +D D  +E+  E+  E A           DQA I  IRAK+E++RQSR+A APDYISL
Sbjct: 183 QVSDLD-FDEEGEEEQHEDA---------FADQAAI--IRAKKERMRQSRSAPAPDYISL 242

Query: 261 DAG-SNHGEAEGLSDEEPEFQTRIAMLGEKVDGPKKGVFEDVDERSVRAGQLTMD--DDE 320
           D G  NH   EG+SDE+ +FQ        + D  KKGVF+  DE        T    +DE
Sbjct: 243 DGGIVNHSAVEGVSDEDADFQGIFVGPRPQKD-DKKGVFDFGDENPTAKETTTSSIYEDE 302

Query: 321 DEEERKWEEEQFRKGLGKRMDEGP--TAVSRNASSAQSAQPQSYMYTTPESYSSVACIPP 380
           DEE++ WEEEQF+KG+GKRMDEG   T  S        ++ Q+     P+ Y+  A  P 
Sbjct: 303 DEEDKLWEEEQFKKGIGKRMDEGSHRTVTSNGIGVPLHSKQQTLPQQQPQMYAYHAGTPM 362

Query: 381 AGPPSIGGAIGGVQGVGTMSISQQAKIAKLAFQDNLKRLKETHVKTMTSLARVDESLSAS 440
               S+   IG    V T+ +SQQA++AK A +DN+K+LKE+H KT++SL + DE+L+AS
Sbjct: 363 PN-VSVAPTIGPATSVDTLPMSQQAELAKKALKDNVKKLKESHAKTLSSLTKTDENLTAS 422

Query: 441 LVNITVLEKSSSDAGEKYIFMQRLRDFVSVICDFLQ 448
           L++IT LE S S AG+KY+FMQ+LRDF+SVICDF+Q
Sbjct: 423 LMSITALESSLSAAGDKYVFMQKLRDFISVICDFMQ 427

The following BLAST results are available for this feature:

BLAST of Spo13247.1 vs. NCBI nr
BLAST of Spo13247.1 vs. UniProtKB/TrEMBL
BLAST of Spo13247.1 vs. ExPASy Swiss-Prot
BLAST of Spo13247.1 vs. TAIR (Arabidopsis)

BLAST of Spo13247.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902166786\|gb\|KNA07271.1\|	8.1e-225	100.	hypothetical protein SOVF_1734...	[more]
gi\|731351490\|ref\|XP_010687066.1\|	7.2e-173	77.2	PREDICTED: LOW QUALITY PROTEIN...	[more]
gi\|731370629\|ref\|XP_010647970.1\|	1.1e-109	57.4	PREDICTED: PAX3- and PAX7-bind...	[more]
gi\|297737868\|emb\|CBI27069.3\|	4.6e-103	58.3	unnamed protein product [Vitis...	[more]
gi\|645276184\|ref\|XP_008243166.1\|	3.6e-100	54.2	PREDICTED: PAX3- and PAX7-bind...	[more]

BLAST of Spo13247.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QL18_SPIOL	5.6e-225	100.	Uncharacterized protein (Fragm...	[more]
F6HF14_VITVI	3.5e-102	56.3	Putative uncharacterized prote...	[more]
A0A059A010_EUCGR	1.6e-99	55.1	Uncharacterized protein OS=Euc...	[more]
A0A059BFV8_EUCGR	4.8e-99	53.2	Uncharacterized protein OS=Euc...	[more]
I1NDJ9_SOYBN	1.9e-95	55.0	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo13247.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo13247.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G08550.1	1.7e-68	44.5	GC-rich sequence DNA-binding f...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012890	GC-rich sequence DNA-binding factor	PANTHER	PTHR12214	GC-RICH SEQUENCE DNA-BINDING FACTOR	coord: 352..447 score: 5.3E-103coord: 19..333 score: 5.3E
IPR028211	Pre-mRNA-splicing factor Ntr2	PFAM	PF15458	NTR2	coord: 128..332 score: 2.
None	No IPR available	PANTHER	PTHR12214:SF0	PROTEIN F43G9.12, ISOFORM A	coord: 352..447 score: 5.3E-103coord: 19..333 score: 5.3E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0000390	spliceosomal complex disassembly
cellular_component	GO:0005634	nucleus
cellular_component	GO:0071008	U2-type post-mRNA release spliceosomal complex
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity