Spo11796.1 (mRNA) | SpinachBase

Overview


Name	Spo11796.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family, putative
Location	chr4 : 111731013 .. 111731411 (+)
Sequence length	399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGTAATAAAAAGCTCATTAAAATGGCAAAGAAGTGGCAAAAATTAGCAGCCGCAAGCAGGAGAAGGATTTCCTGGTCAAGAGCAGTGGCTGAAAAGGGTCGCTTTGTTATTTATACATGCGATAAAAGACGGTTCATGATTCCTTTGACATACCTCAAGAGCGCAATTTTCACAGAGCTCTTTCAAATGGCAGAGGAAGAGTTTGGAGTAGCAAGTTCAGGGCCGATTATGCTGCCTTGTGATTCAAATTTCATGGAGTACGTCATCTCCATAATGCAAAGACATGTCGCTGAGGAGTTGGAGAAGGCACTAATCATGTCCTGTAGATATTCATCATTGTCAAATAACCATCAAGAACAAACTAATCAACCACTTTTAATCTCTAGTTTTTAG

mRNA sequence

ATGATCAGTAATAAAAAGCTCATTAAAATGGCAAAGAAGTGGCAAAAATTAGCAGCCGCAAGCAGGAGAAGGATTTCCTGGTCAAGAGCAGTGGCTGAAAAGGGTCGCTTTGTTATTTATACATGCGATAAAAGACGGTTCATGATTCCTTTGACATACCTCAAGAGCGCAATTTTCACAGAGCTCTTTCAAATGGCAGAGGAAGAGTTTGGAGTAGCAAGTTCAGGGCCGATTATGCTGCCTTGTGATTCAAATTTCATGGAGTACGTCATCTCCATAATGCAAAGACATGTCGCTGAGGAGTTGGAGAAGGCACTAATCATGTCCTGTAGATATTCATCATTGTCAAATAACCATCAAGAACAAACTAATCAACCACTTTTAATCTCTAGTTTTTAG

Coding sequence (CDS)

ATGATCAGTAATAAAAAGCTCATTAAAATGGCAAAGAAGTGGCAAAAATTAGCAGCCGCAAGCAGGAGAAGGATTTCCTGGTCAAGAGCAGTGGCTGAAAAGGGTCGCTTTGTTATTTATACATGCGATAAAAGACGGTTCATGATTCCTTTGACATACCTCAAGAGCGCAATTTTCACAGAGCTCTTTCAAATGGCAGAGGAAGAGTTTGGAGTAGCAAGTTCAGGGCCGATTATGCTGCCTTGTGATTCAAATTTCATGGAGTACGTCATCTCCATAATGCAAAGACATGTCGCTGAGGAGTTGGAGAAGGCACTAATCATGTCCTGTAGATATTCATCATTGTCAAATAACCATCAAGAACAAACTAATCAACCACTTTTAATCTCTAGTTTTTAG

Protein sequence

MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCRYSSLSNNHQEQTNQPLLISSF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11796	Spo11796	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11796.1	Spo11796.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11796.1.exon.1	Spo11796.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11796.1.CDS.1	Spo11796.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo11796.1 vs. NCBI nr
Match: gi|902210321|gb|KNA16393.1| (hypothetical protein SOVF_089560 [Spinacia oleracea])

HSP 1 Score: 201.4 bits (511), Expect = 9.500e-49
Identity = 103/135 (76.30%), Postives = 117/135 (86.67%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFT 60
           MIS KKLIKMA+KWQ+LAAASRRRI WS+ VAEKG FV+YT DKRRFMIPL YL S IF 
Sbjct: 1   MISTKKLIKMARKWQRLAAASRRRIYWSKPVAEKGHFVVYTSDKRRFMIPLAYLNSEIFR 60

Query: 61  ELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMS---CRYSSLSN 120
           ELF++AEEE+GV+SSGPIMLPCDSNFMEY IS++QRHV +ELEKALI S   CRYSSLSN
Sbjct: 61  ELFRIAEEEYGVSSSGPIMLPCDSNFMEYTISMIQRHVTKELEKALITSLANCRYSSLSN 120

Query: 121 NHQEQTNQPLLISSF 133
           ++QEQT+Q L I SF
Sbjct: 121 DYQEQTSQQLFICSF 135

[Close]

BLAST of Spo11796.1 vs. NCBI nr
Match: gi|902203451|gb|KNA14561.1| (hypothetical protein SOVF_106450 [Spinacia oleracea])

HSP 1 Score: 196.4 bits (498), Expect = 3.100e-47
Identity = 100/126 (79.37%), Postives = 111/126 (88.10%), Query Frame = 1


		  
Query: 10  MAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFTELFQMAEEE 69
           MA+KWQ+LAAASRRRISWSR+VA+KG FV+YT DKRRFMIPL YLKS IFTELF+MAEEE
Sbjct: 1   MARKWQRLAAASRRRISWSRSVADKGHFVVYTSDKRRFMIPLIYLKSEIFTELFRMAEEE 60

Query: 70  FGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMS---CRYSSLSNNHQEQTNQP 129
           FGV SSGPIMLPCDS+FMEYVIS++QRHV E++EKALIMS   CRYSSLSN  QEQ NQ 
Sbjct: 61  FGVESSGPIMLPCDSSFMEYVISMIQRHVTEDMEKALIMSLATCRYSSLSNGLQEQPNQQ 120

Query: 130 LLISSF 133
           L I SF
Sbjct: 121 LFICSF 126

[Close]

BLAST of Spo11796.1 vs. NCBI nr
Match: gi|902203449|gb|KNA14559.1| (hypothetical protein SOVF_106430 [Spinacia oleracea])

HSP 1 Score: 195.7 bits (496), Expect = 5.200e-47
Identity = 101/135 (74.81%), Postives = 115/135 (85.19%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFT 60
           MIS KKLIKMAKKWQ+LA ASRRRISWSR+VA+KG FV+YT DK RFMIPL YL S IF 
Sbjct: 1   MISTKKLIKMAKKWQRLAVASRRRISWSRSVADKGHFVVYTSDKTRFMIPLAYLDSEIFR 60

Query: 61  ELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMS---CRYSSLSN 120
           ELF++AEEEFGV+  GPIMLPCDSNFMEY IS++QRHV E+LEKALIMS   CRYSSL +
Sbjct: 61  ELFRIAEEEFGVSRLGPIMLPCDSNFMEYAISMIQRHVDEDLEKALIMSLANCRYSSLLH 120

Query: 121 NHQEQTNQPLLISSF 133
            +Q+QT+Q LLI SF
Sbjct: 121 ENQQQTSQQLLICSF 135

[Close]

BLAST of Spo11796.1 vs. NCBI nr
Match: gi|902203452|gb|KNA14562.1| (hypothetical protein SOVF_106460 [Spinacia oleracea])

HSP 1 Score: 195.3 bits (495), Expect = 6.800e-47
Identity = 99/135 (73.33%), Postives = 116/135 (85.93%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFT 60
           MIS KKL+KMA+KWQK+AAASR+RISW R VA+KG FV+YT D RRF+IPL YLKS IF 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60

Query: 61  ELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIM---SCRYSSLSN 120
           ELF++AEEEFG+ SSGPI LPCDS+FMEY IS++QR VAE+LEKALIM   SCRYSS+S+
Sbjct: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYSSVSH 120

Query: 121 NHQEQTNQPLLISSF 133
            HQ+QTN  LLISSF
Sbjct: 121 EHQDQTNSHLLISSF 135

[Close]

BLAST of Spo11796.1 vs. NCBI nr
Match: gi|902203446|gb|KNA14556.1| (hypothetical protein SOVF_106400 [Spinacia oleracea])

HSP 1 Score: 194.9 bits (494), Expect = 8.900e-47
Identity = 102/136 (75.00%), Postives = 118/136 (86.76%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFT 60
           MIS KKLIKMA+KWQK+AAASR+RISWSR VA+KG FV+YT D+RRFMIPL YL+S IF 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWSRPVADKGHFVVYTSDERRFMIPLGYLESEIFR 60

Query: 61  ELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMS---CRYSS-LS 120
           ELF++AEEEFGVASSG IMLPCDS+FMEY IS++QRHVAE+LEKALIMS   C+YSS L 
Sbjct: 61  ELFRIAEEEFGVASSGRIMLPCDSDFMEYAISMIQRHVAEDLEKALIMSLANCKYSSLLL 120

Query: 121 NNHQEQTNQPLLISSF 133
           + HQ+QTNQ L I SF
Sbjct: 121 HEHQDQTNQQLFICSF 136

[Close]

BLAST of Spo11796.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RA48_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089560 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.600e-49
Identity = 103/135 (76.30%), Postives = 117/135 (86.67%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFT 60
           MIS KKLIKMA+KWQ+LAAASRRRI WS+ VAEKG FV+YT DKRRFMIPL YL S IF 
Sbjct: 1   MISTKKLIKMARKWQRLAAASRRRIYWSKPVAEKGHFVVYTSDKRRFMIPLAYLNSEIFR 60

Query: 61  ELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMS---CRYSSLSN 120
           ELF++AEEE+GV+SSGPIMLPCDSNFMEY IS++QRHV +ELEKALI S   CRYSSLSN
Sbjct: 61  ELFRIAEEEYGVSSSGPIMLPCDSNFMEYTISMIQRHVTKELEKALITSLANCRYSSLSN 120

Query: 121 NHQEQTNQPLLISSF 133
           ++QEQT+Q L I SF
Sbjct: 121 DYQEQTSQQLFICSF 135

[Close]

BLAST of Spo11796.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4Y5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106450 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.100e-47
Identity = 100/126 (79.37%), Postives = 111/126 (88.10%), Query Frame = 1


		  
Query: 10  MAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFTELFQMAEEE 69
           MA+KWQ+LAAASRRRISWSR+VA+KG FV+YT DKRRFMIPL YLKS IFTELF+MAEEE
Sbjct: 1   MARKWQRLAAASRRRISWSRSVADKGHFVVYTSDKRRFMIPLIYLKSEIFTELFRMAEEE 60

Query: 70  FGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMS---CRYSSLSNNHQEQTNQP 129
           FGV SSGPIMLPCDS+FMEYVIS++QRHV E++EKALIMS   CRYSSLSN  QEQ NQ 
Sbjct: 61  FGVESSGPIMLPCDSSFMEYVISMIQRHVTEDMEKALIMSLATCRYSSLSNGLQEQPNQQ 120

Query: 130 LLISSF 133
           L I SF
Sbjct: 121 LFICSF 126

[Close]

BLAST of Spo11796.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6H1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106430 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.600e-47
Identity = 101/135 (74.81%), Postives = 115/135 (85.19%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFT 60
           MIS KKLIKMAKKWQ+LA ASRRRISWSR+VA+KG FV+YT DK RFMIPL YL S IF 
Sbjct: 1   MISTKKLIKMAKKWQRLAVASRRRISWSRSVADKGHFVVYTSDKTRFMIPLAYLDSEIFR 60

Query: 61  ELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMS---CRYSSLSN 120
           ELF++AEEEFGV+  GPIMLPCDSNFMEY IS++QRHV E+LEKALIMS   CRYSSL +
Sbjct: 61  ELFRIAEEEFGVSRLGPIMLPCDSNFMEYAISMIQRHVDEDLEKALIMSLANCRYSSLLH 120

Query: 121 NHQEQTNQPLLISSF 133
            +Q+QT+Q LLI SF
Sbjct: 121 ENQQQTSQQLLICSF 135

[Close]

BLAST of Spo11796.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R709_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106460 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.700e-47
Identity = 99/135 (73.33%), Postives = 116/135 (85.93%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFT 60
           MIS KKL+KMA+KWQK+AAASR+RISW R VA+KG FV+YT D RRF+IPL YLKS IF 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60

Query: 61  ELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIM---SCRYSSLSN 120
           ELF++AEEEFG+ SSGPI LPCDS+FMEY IS++QR VAE+LEKALIM   SCRYSS+S+
Sbjct: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYSSVSH 120

Query: 121 NHQEQTNQPLLISSF 133
            HQ+QTN  LLISSF
Sbjct: 121 EHQDQTNSHLLISSF 135

[Close]

BLAST of Spo11796.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4Y2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106400 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.200e-47
Identity = 102/136 (75.00%), Postives = 118/136 (86.76%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVAEKGRFVIYTCDKRRFMIPLTYLKSAIFT 60
           MIS KKLIKMA+KWQK+AAASR+RISWSR VA+KG FV+YT D+RRFMIPL YL+S IF 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWSRPVADKGHFVVYTSDERRFMIPLGYLESEIFR 60

Query: 61  ELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMS---CRYSS-LS 120
           ELF++AEEEFGVASSG IMLPCDS+FMEY IS++QRHVAE+LEKALIMS   C+YSS L 
Sbjct: 61  ELFRIAEEEFGVASSGRIMLPCDSDFMEYAISMIQRHVAEDLEKALIMSLANCKYSSLLL 120

Query: 121 NNHQEQTNQPLLISSF 133
           + HQ+QTNQ L I SF
Sbjct: 121 HEHQDQTNQQLFICSF 136

[Close]

BLAST of Spo11796.1 vs. ExPASy Swiss-Prot
Match: SAU66_ARATH (Auxin-responsive protein SAUR66 OS=Arabidopsis thaliana GN=SAUR66 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.000e-27
Identity = 62/134 (46.27%), Postives = 91/134 (67.91%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSR-----AVAEKGRFVIYTCDKRRFMIPLTYLK 60
           M++ KKLIKM +KWQ+ AA  R+RIS+ R        EKG FV+YT D  RF  P++YL 
Sbjct: 1   MMNTKKLIKMFRKWQQRAALHRKRISFQRPSTRSTTVEKGCFVVYTADNTRFAFPISYLS 60

Query: 61  SAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCRYSSL 120
           +++F E+ +++EEEFG+ + GPI LP DS F+EY+I +++R +  + EKAL+MS   +  
Sbjct: 61  NSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSISSARC 120

Query: 121 SNNHQEQTNQPLLI 130
           S   QEQ+ Q LL+
Sbjct: 121 SLQKQEQSTQQLLV 134

[Close]

BLAST of Spo11796.1 vs. ExPASy Swiss-Prot
Match: SAU63_ARATH (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.700e-26
Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRA--------VAEKGRFVIYTCDKRRFMIPLT 60
           MI+ KKL+KMAKKWQ+ AA  R+RIS+ R+          EKG FV+YT DK RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCRY 120
           YL +++  EL +++EE+FG+ + GPI LP DS F+EY++ ++QR + E+ EKAL++S   
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 SSLSNNHQEQ---TNQPLLI 130
           +  S   QEQ   T Q LL+
Sbjct: 121 ARCSFQPQEQQCSTTQQLLV 140

[Close]

BLAST of Spo11796.1 vs. ExPASy Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.700e-26
Identity = 67/140 (47.86%), Postives = 93/140 (66.43%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRA-------VAEKGRFVIYTCDKRRFMIPLTY 60
           M++ KKLIKMAKKWQ+ AA  R+RIS+ R+        AEKG FV+YT D  RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCR-- 120
           L +++F EL +++EEEFG+ + GPI  P DS F+EY+I ++QR +  + EKAL+MS    
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 --YSSLSNNHQEQTNQPLLI 130
              S  S   QE++ Q LL+
Sbjct: 121 RCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11796.1 vs. ExPASy Swiss-Prot
Match: SAU67_ARATH (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.000e-26
Identity = 67/141 (47.52%), Postives = 93/141 (65.96%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRA--------VAEKGRFVIYTCDKRRFMIPLT 60
           MI+ KKL+KMAKKWQ+ AA  R+RIS+ R+          EKG FV+YT DK RF  P++
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCRY 120
           YL ++I  EL +++EEEFG+ + GPI LP DS F+EY+I ++QR +  + EKAL+MS   
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSISS 121

Query: 121 SSLSNN----HQEQTNQPLLI 130
           +  S       QEQ+ Q LL+
Sbjct: 122 AKCSLQCSLLQQEQSTQQLLV 142

[Close]

BLAST of Spo11796.1 vs. ExPASy Swiss-Prot
Match: SAU65_ARATH (Auxin-responsive protein SAUR65 OS=Arabidopsis thaliana GN=SAUR65 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.600e-26
Identity = 67/147 (45.58%), Postives = 93/147 (63.27%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVA---------------EKGRFVIYTCDKR 60
           MI+ KKL+KMAKKWQ+ AA  R+RIS+ R+                 EKG FV+YT DK 
Sbjct: 1   MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60

Query: 61  RFMIPLTYLKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKA 120
           RF  PL+YL +++F EL +++EEEFG+ + GPI LP DS F+EY+I  ++R +  + EKA
Sbjct: 61  RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120

Query: 121 LIMSCRYSSLSNNHQEQTN---QPLLI 130
           L+MS   +  S   QEQ +   Q LL+
Sbjct: 121 LLMSISSARCSMQPQEQQSGYTQQLLV 147

[Close]

BLAST of Spo11796.1 vs. TAIR (Arabidopsis)
Match: AT1G29500.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.7 bits (304), Expect = 3.400e-28
Identity = 62/134 (46.27%), Postives = 91/134 (67.91%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSR-----AVAEKGRFVIYTCDKRRFMIPLTYLK 60
           M++ KKLIKM +KWQ+ AA  R+RIS+ R        EKG FV+YT D  RF  P++YL 
Sbjct: 1   MMNTKKLIKMFRKWQQRAALHRKRISFQRPSTRSTTVEKGCFVVYTADNTRFAFPISYLS 60

Query: 61  SAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCRYSSL 120
           +++F E+ +++EEEFG+ + GPI LP DS F+EY+I +++R +  + EKAL+MS   +  
Sbjct: 61  NSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSISSARC 120

Query: 121 SNNHQEQTNQPLLI 130
           S   QEQ+ Q LL+
Sbjct: 121 SLQKQEQSTQQLLV 134

[Close]

BLAST of Spo11796.1 vs. TAIR (Arabidopsis)
Match: AT1G29450.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.2 bits (300), Expect = 9.800e-28
Identity = 67/140 (47.86%), Postives = 93/140 (66.43%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRA-------VAEKGRFVIYTCDKRRFMIPLTY 60
           M++ KKLIKMAKKWQ+ AA  R+RIS+ R+        AEKG FV+YT D  RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCR-- 120
           L +++F EL +++EEEFG+ + GPI  P DS F+EY+I ++QR +  + EKAL+MS    
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 --YSSLSNNHQEQTNQPLLI 130
              S  S   QE++ Q LL+
Sbjct: 121 RCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11796.1 vs. TAIR (Arabidopsis)
Match: AT1G29440.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.2 bits (300), Expect = 9.800e-28
Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRA--------VAEKGRFVIYTCDKRRFMIPLT 60
           MI+ KKL+KMAKKWQ+ AA  R+RIS+ R+          EKG FV+YT DK RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCRY 120
           YL +++  EL +++EE+FG+ + GPI LP DS F+EY++ ++QR + E+ EKAL++S   
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 SSLSNNHQEQ---TNQPLLI 130
           +  S   QEQ   T Q LL+
Sbjct: 121 ARCSFQPQEQQCSTTQQLLV 140

[Close]

BLAST of Spo11796.1 vs. TAIR (Arabidopsis)
Match: AT1G29510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.4 bits (298), Expect = 1.700e-27
Identity = 67/141 (47.52%), Postives = 93/141 (65.96%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRA--------VAEKGRFVIYTCDKRRFMIPLT 60
           MI+ KKL+KMAKKWQ+ AA  R+RIS+ R+          EKG FV+YT DK RF  P++
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKALIMSCRY 120
           YL ++I  EL +++EEEFG+ + GPI LP DS F+EY+I ++QR +  + EKAL+MS   
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSISS 121

Query: 121 SSLSNN----HQEQTNQPLLI 130
           +  S       QEQ+ Q LL+
Sbjct: 122 AKCSLQCSLLQQEQSTQQLLV 142

[Close]

BLAST of Spo11796.1 vs. TAIR (Arabidopsis)
Match: AT1G29460.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 3.700e-27
Identity = 67/147 (45.58%), Postives = 93/147 (63.27%), Query Frame = 1


		  
Query: 1   MISNKKLIKMAKKWQKLAAASRRRISWSRAVA---------------EKGRFVIYTCDKR 60
           MI+ KKL+KMAKKWQ+ AA  R+RIS+ R+                 EKG FV+YT DK 
Sbjct: 1   MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60

Query: 61  RFMIPLTYLKSAIFTELFQMAEEEFGVASSGPIMLPCDSNFMEYVISIMQRHVAEELEKA 120
           RF  PL+YL +++F EL +++EEEFG+ + GPI LP DS F+EY+I  ++R +  + EKA
Sbjct: 61  RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120

Query: 121 LIMSCRYSSLSNNHQEQTN---QPLLI 130
           L+MS   +  S   QEQ +   Q LL+
Sbjct: 121 LLMSISSARCSMQPQEQQSGYTQQLLV 147

The following BLAST results are available for this feature:

BLAST of Spo11796.1 vs. NCBI nr
BLAST of Spo11796.1 vs. UniProtKB/TrEMBL
BLAST of Spo11796.1 vs. ExPASy Swiss-Prot
BLAST of Spo11796.1 vs. TAIR (Arabidopsis)

BLAST of Spo11796.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210321\|gb\|KNA16393.1\|	9.5e-49	76.3	hypothetical protein SOVF_0895...	[more]
gi\|902203451\|gb\|KNA14561.1\|	3.1e-47	79.3	hypothetical protein SOVF_1064...	[more]
gi\|902203449\|gb\|KNA14559.1\|	5.2e-47	74.8	hypothetical protein SOVF_1064...	[more]
gi\|902203452\|gb\|KNA14562.1\|	6.8e-47	73.3	hypothetical protein SOVF_1064...	[more]
gi\|902203446\|gb\|KNA14556.1\|	8.9e-47	75.0	hypothetical protein SOVF_1064...	[more]

BLAST of Spo11796.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RA48_SPIOL	6.6e-49	76.3	Uncharacterized protein OS=Spi...	[more]
A0A0K9R4Y5_SPIOL	2.1e-47	79.3	Uncharacterized protein OS=Spi...	[more]
A0A0K9R6H1_SPIOL	3.6e-47	74.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9R709_SPIOL	4.7e-47	73.3	Uncharacterized protein OS=Spi...	[more]
A0A0K9R4Y2_SPIOL	6.2e-47	75.0	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo11796.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SAU66_ARATH	6.0e-27	46.2	Auxin-responsive protein SAUR6...	[more]
SAU63_ARATH	1.7e-26	46.4	Auxin-responsive protein SAUR6...	[more]
SAU64_ARATH	1.7e-26	47.8	Auxin-responsive protein SAUR6...	[more]
SAU67_ARATH	3.0e-26	47.5	Auxin-responsive protein SAUR6...	[more]
SAU65_ARATH	6.6e-26	45.5	Auxin-responsive protein SAUR6...	[more]

BLAST of Spo11796.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G29500.1	3.4e-28	46.2	SAUR-like auxin-responsive pro...	[more]
AT1G29450.1	9.8e-28	47.8	SAUR-like auxin-responsive pro...	[more]
AT1G29440.1	9.8e-28	46.4	SAUR-like auxin-responsive pro...	[more]
AT1G29510.1	1.7e-27	47.5	SAUR-like auxin-responsive pro...	[more]
AT1G29460.1	3.7e-27	45.5	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 5..93 score: 2.7
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 2..132 score: 4.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin