Spo17564.1 (mRNA)

Overview
NameSpo17564.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionNEFA-interacting nuclear protein NIP30, putative
Locationchr5 : 76466 .. 87478 (+)
Sequence length1575
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACACGACATTTATGTTGTTCCGGATACTAAAAGGGCATTTCCCTTATTTTTTGGACGGGAAAAATAAGGCGCACACGTTTAATGAATTTAGGCAAGGGTTGAGCAAAAAGGGCTTAAAAGAAATGAGCATAGTTTGGAGTTTCCGGTTATTCAGACGCAGGTGCTGCTACAGTTGCTATCCGGCGTAAGATGCAAACCGGAAAATTGGTAAATGCTGATTGAATTTGGAATCACTTTGAAGTAATTTGAGTGAATAAGATAATCAGAAATGGCTGAGGATGCAGCCCCTCAAATTAGGTTGATGAATTTCGTGTCCCAAGAAGAGGTCGAATTTGAAACCCTAGTTTTTTTGTTTGTTTGATTGATTGATTTTTTTTTTGTTTGTTTGTTTGTTGAGGCAATTAATTTGTGTTTAGATTGAAGTTATGGATGTGGTTGTGATTGGCATTTGACAGTTAGATGTAGCAAAGAGTAGCCGGGGTGAAAGAGTGGAAGATGGGACTGCTCAAAGAGACCGTCCTCTTTTCGAGGTTTTGCATATTCGTCTTTTATGACTTATTATTGTTTGTTCCAGTTGTTGCTGCTTTGCTTTCAGTTGATTTTACTTTTGAAAATGCTTCATTTTTTGTTACGATATTGAAATCAGTACAACACCAGTGTTTTTTTTAATCTTTGTCAACTGTATAAATTTTATTCAGGGAGTTTTTTGAAACAGACTGAATGGATGAAAACCTACTCGTCCAATCCTATTTATACTGTCAGTCTGTCACAGGTGCTTCATATGTCCTACAGCTACCCAATAGGAAACCATTACAATATCTAGCTATTACAAAAGGGAAATTGAAAATCAATAACTGTGATTTGTGATAGTGCAAATCACATGTCATTTTCGTAATTAAATCGGGAAGAGAAACAAAAAGAAGTTTGAAATAAGAAGGAAAAAGAAAAAACGTGAATAAAATGAATAAAATTTGAGATCAAATGAATAAAAGTTGAGTTTAAATGAATATTTTGGTCACACTTGAACATCAACTTATTAAGTATTATGCTATGTGATTTATACTATTCATATAAATTACAGTTATTGATTTAAAATCACCCTATTACAAAATATCAATTACACAATATTGTCAACATTTTATCCCAACTGCTTGATGCTGGCGTGCCAAGGCTCCATAATAATCATAACAGACTCCAGGGATCAGTTACATGAGCTCATCTTCTGCTGCGCACGGGTTCCACTAGAATTGGACTACCAAGTGTTGATGAGCTGTTACCTAGGAGAAGTTTTTCGAATAATAGGATCAGGGTTACTTTTGCTTCGGGGTGTTGTAACCTTCTTTCTTCTCTTTATGTTCACTGTCCCTCTAACTATCCTTTTTGTACCCCACCTTCTATTTTATGCAATGTCCTCCTCGGTGTCTTTCTAATATATTTATTACACTACCTTTTTGTTAAATTTTGTATAGATTTTGAAGGAGAATAAAGATAAGCAAGATGCGGAATTCAATGAGCGATTCAAGCATCGTATGTGCCCCTATCTACTCTATGTTTCTCTCTTTTCATGAATAAGCCTATCACTTTTTTGTTTTGTTGCAGGACCACCAAAGGCTTTGGACGAAGATGAGACCGAGTTCCTTGATAAATTGGAGACGGTGAGATTATTATTATTTTATTTCATGTTTCTTCTTATTTTTTCTTCTTTCATGCTTGTCTGGGAACAGTGGGAAGGCCAATGACCTTACATTTCCGGTTCAAGCTTAGCTAGAAACAAAGGATTTACCCCTACTTGGAGTCATGAGATGAACTTTGTAAAATTTTGTTCTTCCATACAAAGTAGTATATTTATATACAAGATACTTTTAGTTGCAATAGAAAGTTTTTAAGGGGAAAAAATGACGTGACAACAGTGAGAAACAGGATGTGAAGTACTTTTTTTGGTCAATCCATATGCTTTTATTGGAAAGGCAATGCAGATGGTTTGATCAACATGTCAATTACATGAACATTACTAAAGAGTGCGCCATTTTTGAATTTGTATTGGGATATGTGATATGTGAATATCGATCATGTTTTTCACCTTGCCCTTTGTGATGCTAAATTTTGTCTTCGTCACTTAGTTAAGTTGTAGTCTCAAAACAAATGTTAGTGGAACATATTACAAAAGAAACAACTAAGAATTCAGATGGAGCAGACTTCATTTCATATGAGTTGAAGTTAGATCAATTCTCAACTATATGGCATTAACTCTACTTGAGGAGTGCTGTTAGATCTGGGCTAATGCATTACTTGCAAACCCATGTTGGATCTGAGACTCTGATATGATTTAGGACAGAGTCCCTCTGTGGTGCTTGAACTTAGAAGGAGGTTCATCTATTGGAGGATGAAATGTTTGTTCTGCTTGGGCTTTTGGATAAGCTCCCAAGATGGATGACATAGCACCTAGACTCTAGTCCTTTTGAAGCTATAAAGGTAATCAATTTCCAGAGTGGCGGTGACGCTAGAGAACCTACTTAAAGAGCATGAGGGATTATAAACATAGCTCTGAGTCTACACATATGTTTCAGTGCCTTCTATATGGTAATATTGCCAGTTTAAACTGCTTGTTCTGAACTTTCTTCATGCTTAAACAGTCTGTTTACTTGTTTTAAATTTTTTGATGTTCTTGTAGTCCCGGAAAGAATACGAACGACTGATAGCTGATGAAGAATCCCAACAACTCAGGGGTTTTCAAGTAAATATCCTATCCCACTTTTTGCGGAATATACTATCTCTTTGACGCTATTATTCTTGAAATAGTCTCCCTTCACTTTTGTCCCTCTGTTACTTTACTCGTAATTAGGTAACATATGCGTTGTTGTTGTTGGATTCCCGGTAAGACAGTGCTTTCCTTTTGTGAAAGATCTATTAGGTTGGAGAGAATGTGTTGCTGGTCTTGCTTTTTATTTCTGTTCTTGTTTTAGAATGTGTAATTTCTTTTAAATTATTGCAATTGGATGCAACTAACACTTTATTTGCATGGGTACAGGGTACTAATTTTTGTGAAGTCATTATCCCCAAACGCTAAACTAAATTAATTGACGTTAAATTTAGTGTTCCTTTTTCTGAATATAGTTTTTCCATTACCTATTTTTGACATAAGGAACCAGGGCATTTTACGGGCAAAATTATCAACAACGCATATTGCTGAAAAGGAAAAAGCTTTGATTTTAAGGAGCTCTAAAGTTATTACTGGATTGTTTCTTCATAGTGCATACGAGTTATTGAACTTATTGCCAAATGGAAACCATAGTGCATTTCTTTGGAAGGTTGATGTATGTGCAAGAGCTTTTAAAGGTCTCGCTATTTTGAACCAACTTCACAAAGCAACTGCCACAAGTAACAAACTATTTTTCATTTTTGGGTTCTTCGATTAGGGATTTGAAAGAGAAATAAAAGGAGATATGCACTCAGTGATAATGATTAGGGAAATCCCATAAAACTCTACAAATTCTTATTAAAATTTATGTCACACTCAATTGAGATATACTAACTTCAAATTTTGCGGTGGTGGTGTTGAAGGCAGCAGAGGAGGTTGGTGGATGGCGATTTTGGGTATAGACAAAGGGATGCCGAAATCTGTGGAGGTGGTGGTGGGGAAGCTCGGTGACATGGGTTCTGTTAGATGGGCGCTATGATTCCCGGGAGGTGATTGGTGTCTATAGTGGTGGGAACTCTAGGTTGGTGCTTGCGGAAAATTTCCGGGATGGTGGCGTCTGACGGAAGGAGTTTAATTGTTAGGGACTTAGGGTTGTGGTTACTTCTTACTAGTGTAGAGGATTTGGGGGGAATTGGGAAGCATGTAAAGGGGAATCATGACGAGGGATTGGGGTTATCATAACTGAAAACAGGCAAAGAGAATGAAAAACATCAACCAAACACCATATAAGGTAAACAAGGTAAAAAAAAGGTTTTGATTACCTACCTGTCTTTCTGGAAACCTCCTTACCAAATGGCCAATCAAGTTTTTTTTTTTCCCTTCCTATTCTGTAAATTGGAATGTTGGATTGACATTTTCTCACATTACTCGATATCTTAGCTAAGAGTACAACTCCGAATTCTCTTTTGTAGGAGTTACAAGATATATGGAGTTACAAGATATATGGAGTTCCATTTTAGCATTGGGAGGAGGCCAAGTGAATATGTTGAGATGGCAAGGAGTTACCCGTTAATAAATTTTTTAAATGCGTTAGATAGATTCTACAAAGAAATAGAGACAACAACAAAAACAACAACAAAGCCTTAGTCCCAAAATGATTTGGGGTCGGCTAACATGAATCGTCGTAGGAGATCGTCATTGTCACCAATCAAACCAGAAAGGAGCAGGAAGTAAAAAGAAAAAAACAAGGAAGAGAAAGTGAAATTAATGAAAGTATGATAAGAGAAAATGTATATATATATTATAGAAGAAATATTGTAAGAGATAATAAAAATAAGTAAAATTTAAAATAAATGAATAAGTAAAATAAGTGCATTTCAAAATAGCATGTGAAATTAAAATTTTTTGAAAGAATTTTAAAAATAAAATAAAAGTAAAATAAAAATACAAATAAAGAGAATCAGAAACATTGAAGTTGTGTAAGTCAAATGAAGTCATCAATGTATATTCTCTCCCTCCACTCTGTCCTATCCAACGCCATATTTTCCTCAATTCCAAGAAAGCTCATATCGTGCTCAATCATCTTCCTCCAAGTTTTCTTAGGTCTTCCCCTACCCCTTACAATTTTATCCCTTTGCCACCCTTCTATCCTCCTAACCGGGCAATCATTTGATCTTCTGCTTACATGTCCAAATCATCTTAAACGATTTTCATCATCTTAAACTCAATCGGTGCAACCCCTACTTTCTTTAGAATTTAACACAAAGAAATAGAGACATTTAGAATTTAACTCATAGAAATAACGGATGGCTCAAATGGGTTGTGGGCAGTTATTGTTATTCTGATTCCAAAATTCAAGAATTTTGGACTCAAAATAACAATAACTGCCCACAAAACTTAATAAACTTATTTTTGTCTCATTATCTCTCTTAATTAAACATCATTGCTTCATAACCCCACCATTAATTTCAGAGGCGCTGCTGAGTGCTGACGCCACCACAAACCGGTGGCATAGGTTGTTAATGACATCAACATGAACGAAGTTCAAAGCCAAGATTAACGGCGTGCCGATCCTTTTGCCAATTTCCTCACCCTATTTCTATAGAACTACGGAAGTGCGAATTGAGTGAAGGAAAAAGGAACTAATTTTTTGGCAGATTAAGGGGGGCCTTTTTGCTGGAGAGGTGCGCCACGGTAGAGTTTACAGATCTTTCAATTAAAAATTGTGTACTCCCTCCGTATTTTAAAAAGAGATACACTTTGACCGCACATAGTTTTAGGAGAGTGAGTTGAATTTATTAAAATAAGATGAAAGCGGGGTAGTGGATGAATTATTTTGTTATAGTAAAAAGATGATGTAAGTAAGTGTGGGGACCACAAGAAAGAGAGATACATTAATATAATGAAAGCGAGGACCAAAACATGTCAAAAAAGGAAAGTGTATCTCTTTTTAAAATACGACCGTTTAAGGAAAATATATTTCTTTTTATAATACTGAGGGAGTAAAAGAGAGATTCCCGATGACGATGAAGGAATAATTGTGATGCTGGTAGTTAGGGATGGCAAGGGGTCGGACTCGGGTCGGACATTGACAGATCCCAATCCGACCCGATTACTAATCGGACCTAAAACCAACTCCAAATCCGAAACCCCCAAAATCCGACTTTGCATCCATCAAACAATGCGGGTCGGATGCCTTGCAGGGTCCGGATCCGACCCGACTCCTATTCAGAGTTTTTTTTTATCGTGTTCAGACTCGGACTCGGATTTTCTTATTCCGGATTCGGAACAGACTTTTTCCTTTGAATCAGATGGAATTCGGATTGGATTCAGATTGAATTGCTATCCTACTGGCAATTGTAGATCTACAAAATTTTTCCGGCAATATTAAGGGTTGTGATTGAGTTTTCCGGATATTTCCCGGTGTATTAGGGGTTTTGAGAGAGCTTTCAGGCGACACCTTGCCGGTGGTGATGATGGCCGTAGAAATATAACGGCAAAGTAAGTGATTATGGTGGAGAGAGAAGGAAACATTACAGGCGAAATAGTTAACCTAGGGCGTTAGGGGAATGTTTTACACCCTATACCAGGAGAACGCATTACTCCGTCATTAGTCCTTCTCAATCCATCCTTTCAAATGTGTTATGGAACTCTTACTCCCTCATTAATTCTCCTTCTACACACGGGGCCTAAAAGGGTGATTGTATACTTTAGGACGAAGATTAGACTTCGTTTTTATATAGGTCACAATGTTCCATTTAGAAAGGAAAACATTAAAAAGATGAGTATAGCAAACATGCGTATGTTGAGATGGACGTGCGTACTTTTAGGGATAGACTTAAGAATGAGGATATTCGGGAAATTTGGAGTTGCGGATATTGAGGAAAGATAAAGGAGTATCGGTTACGATGGTTTGGGCCTTAGAGATGTCAATCAATAGATGCACCAATAAGGAAGATGGAGGGTTGGGGTAATGGAGATCTCAAACACAGTCGAGGAAGTCCAAAGATCACTTGGATGGAGGGACTTAAAAAGGAGATGGAGAAAATGGGCTTGCACGATGATGTAGTATTAGATAGAAGCGGACGGAGGAGGAAGATCTTTGTGGATGACCACATGAGATAGGCTCGGTTAATGAAACTGACCCCATCTCCTTTAGAACAATAAGGCTATGCCTATAATATACTATTTGTTGGTGGCAAAAGGTCCATAAATTTGCTGTAGCATGGCCTTTCGGAGGCTCTCTGGAAGCAATTCTTCATGCATTACTTTTTTGCTACATGCTCTATTCTCTCTACAATTTGCTGCTGTTTTGAAAGTTGGTGTTCGTAAAATTTATTGTAGTACGTGATCTATGGTTAATGCCGGCTGCTTTTGTTATTTGGATTTCCACTGTCTCTTTTTGGCTCTGAACCTTCTTATTGAATGTAGGCAGCAGTGGCAGCTCAGTCTATGATTGTACACAAGGTCAACGATACATGTCATGTGTCTGATGTCCAGGTTAGTGTTGAATCAGGAAATACCATTTCGTTGGCTCGCTCTTTTTGAAGAATAATTTTGTCGACGTGTTATGCTTCCGCAAATTGTTTTTTATCTTGTGTAATATCTTCGTGTACTAACTTTATCCGAATCACTTGCGAATATCAGAGTGTTTGATTTGTCCAAAATGAATGTGTATGCACAGCCTTAAACCTACTTATTCAAATGTAACTGGAAATAGGAACACTGGGATTCAGTGTTTTTTGTAAATGTTGCAGAAGGATTCACAGGATGAGCTAACTAGACTCTAGATATGGATTATCCCCTCAAAAAAAAAGGCAGCTCAACCAGGGACCATTTCATCCAACTCCCTACATTTAGATTTCTTCTAGAACAAAGGTTCTAAAACATGCAGTGACCTTCCTTATGACCTCTGACATCAGAGCATCACGTTGCAATAAACTTGCAAGGTCCACCTGCAGAAACAGAATAAATAGAACACAGCAGCTAGGAAAGAGAGCTTTGATTGATTTAATTGATAAAGGTTCATACATTAACCAGTAGCTTGAGGCTACTATTCTCCAAGTTAGTAACTTTAGGTTACAAGTCTCTTAAACGTACTACAAACTCCTTAACTACAGCTCTCTTCTTTCTTCCTCTATTTATACTCTCCATGCTTCACTTCTAGTACGCTGCATTGATGAGCCTTGTCCTCATGTGTTGATAACGTTCTTGTGCCTCTTGCTGCCCTTTGTTGTGGTTGTGGTTCTGCAGGTCTGCTGTTATATGCTGTCCCCTCTTGTTTCTTCTGTGATAGACTATGTGAGTAGGTGGCTTGGTGGTACGGCCTGTACGGTCCATCACACATGTAAGGTAAATAAGTCATAATGTCGTCGAGAAAGGAGAAAAGATTCTCTCTTGGCCTTGGATCCTTCCAAACCCCCACCTCTTTGCTCCATTACCCACCCAAAACCTGACTAAGGAAAAGAACAAAGCGGCTACCATCGAGATGAATTTCTATGGGAATGGATAGGAAACTCCATTACCAGCCAAAGCTGAAGACACTAACTATATAGCTACACCACCCTCTCCTCCCCTCCTGCCGCCCTCGAAAATAGGCCATTTCCACCGGTCTAACATTTTGGAGACCTTAATCTTCAGATCTCATAAAAAAGAAACCCAGGATTAGCCCTAATGAATCTCTTAAGGTACTATTCTAAATCGAGCAGCCAACTCCAACTGAAGTGGGAGAAGCCAAATTTAGTCTGGAGATGCTATACAAGTACTAAATAAGCACATACAACCAAAGAAGAATGCTATTTACCAACCCAAGCCACCCATACAATTCACTTATGCTACGCATAATATTGTAGGCAATAGCTGGATGTAGAAGGCACGGGGCACAAAGAAGATTTTTCAAGAAGTCAATTACTTCGTAGAGAGAGAAAGGGAATATGAAAGAGGTGATTAATTGAGGGAATGAAGAATAGAAAGGGATTCAGGAAAATAAGCTTATTCTTTTACAAGTTAGAGTGACCCGGCCACTCCAAAGATTGGGGGTAATGGCAATTTTTTTTTTTTTTTTTTTACCAATATCACAATCCTTTCTCTTCTCACCTTCTAATTATATTTTCTACTTGTATTTTCAATCTAGTTCATTAAGGCCAACTCTATTCACCTCATTTCCACTTATCTCAGGAAAAATAAGTTTAGTTTAGTTCAGATAAGTCCGGATAAATTCAGATAAGATAAGTGTAGAAAAGATAAGAGAAAATCAGGTGAATAGACCTTAAAAGAAAATGAATTATTAACCATAAAATAGGATCATCTGCAAGCTATAAGTGCGAACTAACCTCCCCTATTCTCCCTACTTGTAAACCCTAGATGCTCCAACTCCCCAAGCTACATTCAACCATAACTCTGAATAGGAGTCGGGTCGGATCCGGACCCTGCAAGGCATCCGACCCGCATTGTTTGATGGATGCAAAGTCGGATTTTGGGGGTTTCGGATTCGGAGTTGGTTTTAGGTCCGATTAGTAATCGGGTCGGATTGGGATCTGTCAATGTCCGACCCGAGTCAACCATAACTTTCAACCAATTAAGTACATTCAACCATAACTTTGGGAATATGGTAATTGTGTAATGCATTTTTGGGAAAGGTTCTTTACTAGTGATTTGTTGTGGGACAGAGTCATAGAATTACTAGGCTAAGGCGGCATTGGCTTTTAGAAATGATTCTGTAGCGGATATTCAGATGATCTCTTTTAATATGTAATCTGTGTTGCTAGGTTCTGACAATACCTTGTCTTTTGGGTTTTCTGTATCACAGTTCATCTATAGGAATAAAGAACATCAACCATTTCAGTAGACAAAAAAAGTGAAATGGGGTCACATTGGCTAAGTGTTTGAGATTCTTGGACCGGGTTCCTCCTTCAGGCCTACTAATTTTCGAATTTTCGTAAAAAAATGTTGGTAGTAGAGACTCCTGAGGCGCCTTAATTCATCCTCTCCATTGGTTCAAAAACCCCCGTACTGCTGATCAATGTGAATGCAATAAATAAATTAGGAGATCCTTACTTGTTTCCATGTGAACTTGATCGCTGATCAGTGGCTGTTTAAAATGCTTACCAGGTAGCAGTTGCCAATTATTAAGTGAACAGTATTTTAGAGGTATACCAAGGATGGAGGGACTAATTTTTGGTCAAAATAGTTGGAGGAATCGGTATCTTATTTCACCAAGTCGACATCAAAGGGTAGAGTGGTATAACTGATATCAAGGGAAATACTGAAATGCTACCTGTAAATAGCATTTGTTCAATTTGAAATTTGTGTCTCAAGACGTTGAAAGTTGCATGTCTCTACGTGAACAAATCCTTTTCTATGTAAGGATAGAGGTTGTTTCTCTAAGTCTGGAACTCGAAATTCATGCCTTATTCACTAATTTTTTTTAACTTAACCTGTTAATAGCAGGAGAAAGAGAGCACGGAGAAGAAAAACCGCCGTGCTCAGCCCTTGGGTATGATCATAAAAGTTAAGCCGGCAAAGAAAGCTAAAGTGGAGCCCTCACCTGAACCAGAGTCTGGAGCTGCTGAAAAGCCTTGTGCTGAGTTTCAATGGCATTCAGATCAGAAACAAACACCTAGTGTTGATGGAGAGAAGTCTCAGGTACAATTCAAGAATTCCAAGAGTCACGGGGTAAACATCCATGATGCATTGAAAACTGGTCTTGTTTCGTACAGTGATGGGAGTGATGATGATTAGTTCTCCTTGTCTGAATGTTTTAGAAGACTATACTAACATGCGTTACTTGTGGTAGTTATGGTTAACATATCATTGCACAATTTTTTTTCGATGACACATCTGGGACACTAGAAGCTAGAACTGCTACTTAGAATATCATAGTTTATCTTTTGCGGAAAAAAAAAATCCTCTGCAGATTTTGTTTATGGGTAGGACTGTACATTTTGACTTCCCCGGACTCTGCAGTATTTCTTTTCCTAAATACGAGAACATGGCAGGATCTTAAGTAGATTACACGAAGTAGTTCCTACTTCCTGTTCATATTATTGTTATTTGGCCAACTAATTGGTTCTTTTGGTCAACTCTTGTCTATGACTCTGCGTGATCAAATCCTAAACAAGGAAATTTTGTTCATGTCTGTTGCTAACATAGAGGGTATATCTGAGTATCAAGATGACGGTTGTAAGTTACAAGGCAGTGTATCTCGTTCTACTCTCATTTTTATGGTTTTACTTTTACATGTGTAGTTATACTACTCATTAGAGATTTTGTCATATGTCGTTGTGTCACGGGTACGGTTTTGGATTTTCAGATATTTTGCACAGCCCTATTGATACGACTGGTTGTAATTTGCATTCTTTAACCATCACCCCA

mRNA sequence

AAACACGACATTTATGTTGTTCCGGATACTAAAAGGGCATTTCCCTTATTTTTTGGACGGGAAAAATAAGGCGCACACGTTTAATGAATTTAGGCAAGGGTTGAGCAAAAAGGGCTTAAAAGAAATGAGCATAGTTTGGAGTTTCCGGTTATTCAGACGCAGGTGCTGCTACAGTTGCTATCCGGCGTAAGATGCAAACCGGAAAATTGGTAAATGCTGATTGAATTTGGAATCACTTTGAAGTAATTTGAGTGAATAAGATAATCAGAAATGGCTGAGGATGCAGCCCCTCAAATTAGGTTGATGAATTTCGTGTCCCAAGAAGAGTTAGATGTAGCAAAGAGTAGCCGGGGTGAAAGAGTGGAAGATGGGACTGCTCAAAGAGACCGTCCTCTTTTCGAGATTTTGAAGGAGAATAAAGATAAGCAAGATGCGGAATTCAATGAGCGATTCAAGCATCGACCACCAAAGGCTTTGGACGAAGATGAGACCGAGTTCCTTGATAAATTGGAGACGTCCCGGAAAGAATACGAACGACTGATAGCTGATGAAGAATCCCAACAACTCAGGGGTTTTCAAGCAGCAGTGGCAGCTCAGTCTATGATTGTACACAAGGTCAACGATACATGTCATGTGTCTGATGTCCAGCAGGAGAAAGAGAGCACGGAGAAGAAAAACCGCCGTGCTCAGCCCTTGGGTATGATCATAAAAGTTAAGCCGGCAAAGAAAGCTAAAGTGGAGCCCTCACCTGAACCAGAGTCTGGAGCTGCTGAAAAGCCTTGTGCTGAGTTTCAATGGCATTCAGATCAGAAACAAACACCTAGTGTTGATGGAGAGAAGTCTCAGGTACAATTCAAGAATTCCAAGAGTCACGGGGTAAACATCCATGATGCATTGAAAACTGGTCTTGTTTCGTACAGTGATGGGAGTGATGATGATTAGTTCTCCTTGTCTGAATGTTTTAGAAGACTATACTAACATGCGTTACTTGTGGTAGTTATGGTTAACATATCATTGCACAATTTTTTTTCGATGACACATCTGGGACACTAGAAGCTAGAACTGCTACTTAGAATATCATAGTTTATCTTTTGCGGAAAAAAAAAATCCTCTGCAGATTTTGTTTATGGGTAGGACTGTACATTTTGACTTCCCCGGACTCTGCAGTATTTCTTTTCCTAAATACGAGAACATGGCAGGATCTTAAGTAGATTACACGAAGTAGTTCCTACTTCCTGTTCATATTATTGTTATTTGGCCAACTAATTGGTTCTTTTGGTCAACTCTTGTCTATGACTCTGCGTGATCAAATCCTAAACAAGGAAATTTTGTTCATGTCTGTTGCTAACATAGAGGGTATATCTGAGTATCAAGATGACGGTTGTAAGTTACAAGGCAGTGTATCTCGTTCTACTCTCATTTTTATGGTTTTACTTTTACATGTGTAGTTATACTACTCATTAGAGATTTTGTCATATGTCGTTGTGTCACGGGTACGGTTTTGGATTTTCAGATATTTTGCACAGCCCTATTGATACGACTGGTTGTAATTTGCATTCTTTAACCATCACCCCA

Coding sequence (CDS)

ATGGCTGAGGATGCAGCCCCTCAAATTAGGTTGATGAATTTCGTGTCCCAAGAAGAGTTAGATGTAGCAAAGAGTAGCCGGGGTGAAAGAGTGGAAGATGGGACTGCTCAAAGAGACCGTCCTCTTTTCGAGATTTTGAAGGAGAATAAAGATAAGCAAGATGCGGAATTCAATGAGCGATTCAAGCATCGACCACCAAAGGCTTTGGACGAAGATGAGACCGAGTTCCTTGATAAATTGGAGACGTCCCGGAAAGAATACGAACGACTGATAGCTGATGAAGAATCCCAACAACTCAGGGGTTTTCAAGCAGCAGTGGCAGCTCAGTCTATGATTGTACACAAGGTCAACGATACATGTCATGTGTCTGATGTCCAGCAGGAGAAAGAGAGCACGGAGAAGAAAAACCGCCGTGCTCAGCCCTTGGGTATGATCATAAAAGTTAAGCCGGCAAAGAAAGCTAAAGTGGAGCCCTCACCTGAACCAGAGTCTGGAGCTGCTGAAAAGCCTTGTGCTGAGTTTCAATGGCATTCAGATCAGAAACAAACACCTAGTGTTGATGGAGAGAAGTCTCAGGTACAATTCAAGAATTCCAAGAGTCACGGGGTAAACATCCATGATGCATTGAAAACTGGTCTTGTTTCGTACAGTGATGGGAGTGATGATGATTAG

Protein sequence

MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNERFKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTCHVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQKQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo17564Spo17564gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo17564.1Spo17564.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo17564.1.exon.1Spo17564.1.exon.1exon
Spo17564.1.exon.2Spo17564.1.exon.2exon
Spo17564.1.exon.3Spo17564.1.exon.3exon
Spo17564.1.exon.4Spo17564.1.exon.4exon
Spo17564.1.exon.5Spo17564.1.exon.5exon
Spo17564.1.exon.6Spo17564.1.exon.6exon
Spo17564.1.exon.7Spo17564.1.exon.7exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo17564.1.utr5p.1Spo17564.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo17564.1.CDS.1Spo17564.1.CDS.1CDS
Spo17564.1.CDS.2Spo17564.1.CDS.2CDS
Spo17564.1.CDS.3Spo17564.1.CDS.3CDS
Spo17564.1.CDS.4Spo17564.1.CDS.4CDS
Spo17564.1.CDS.5Spo17564.1.CDS.5CDS
Spo17564.1.CDS.6Spo17564.1.CDS.6CDS
Spo17564.1.CDS.7Spo17564.1.CDS.7CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo17564.1.utr3p.1Spo17564.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo17564.1 vs. NCBI nr
Match: gi|902193230|gb|KNA12235.1| (hypothetical protein SOVF_127740 isoform A [Spinacia oleracea])

HSP 1 Score: 426.8 bits (1096), Expect = 2.300e-116
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER
Sbjct: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120

Query: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ 180
           HVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ
Sbjct: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ 180

Query: 181 KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
           KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD
Sbjct: 181 KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 223
[Close]
BLAST of Spo17564.1 vs. NCBI nr
Match: gi|902193231|gb|KNA12236.1| (hypothetical protein SOVF_127740 isoform B [Spinacia oleracea])

HSP 1 Score: 420.2 bits (1079), Expect = 2.200e-114
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER
Sbjct: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120

Query: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ 180
           HVSDV QEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ
Sbjct: 121 HVSDV-QEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ 180

Query: 181 KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
           KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD
Sbjct: 181 KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 222
[Close]
BLAST of Spo17564.1 vs. NCBI nr
Match: gi|731341639|ref|XP_010681995.1| (PREDICTED: protein FAM192A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 281.6 bits (719), Expect = 1.200e-72
Identity = 158/224 (70.54%), Postives = 179/224 (79.91%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAED  P IRLMNFVSQEEL+VAK S GER+EDGTAQRDRPL++ILKENKDK DAEFNER
Sbjct: 1   MAEDVPPPIRLMNFVSQEELEVAKRSHGERLEDGTAQRDRPLYDILKENKDKSDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQS-MIVHKVNDT 120
           FKH+PPKALDEDETEFLD+LE SRKEYE+ IADEE+QQL+ FQAAVAAQS M+V++  + 
Sbjct: 61  FKHQPPKALDEDETEFLDRLEKSRKEYEKCIADEEAQQLKSFQAAVAAQSMMVVYEAKEI 120

Query: 121 CHVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSD 180
             VSD Q+EK + EK+NR  QPLG+IIKVKP KKAKVEPS EPES AA+        H +
Sbjct: 121 RPVSDAQEEKRTMEKRNRPVQPLGVIIKVKPQKKAKVEPSLEPESRAAQN-------HLN 180

Query: 181 QKQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
           Q++T S D EK     KNS   G NIHD LKTGLVSYSDGSDDD
Sbjct: 181 QQRTCSTDKEKHHEPVKNSDGDGGNIHDLLKTGLVSYSDGSDDD 217
[Close]
BLAST of Spo17564.1 vs. NCBI nr
Match: gi|641868106|gb|KDO86790.1| (hypothetical protein CISIN_1g028180mg [Citrus sinensis])

HSP 1 Score: 229.6 bits (584), Expect = 5.500e-57
Identity = 134/224 (59.82%), Postives = 169/224 (75.45%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAE+++  IRLMNF+S+E+LD AK +RGERV+DGTAQRDRPLFEILKENKDK+DAEFNER
Sbjct: 1   MAEESSRPIRLMNFISEEQLDEAKRTRGERVDDGTAQRDRPLFEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFL+K ETSR++YER +ADEE+QQLR FQAAVAAQS IVH++ +T 
Sbjct: 61  FKHRPPKALDEDETEFLEKWETSRRDYERQVADEEAQQLRSFQAAVAAQSTIVHELKETP 120

Query: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKP-AKKAKVEPSPEPESGAAEKPCAEFQWHSD 180
            +  VQ++K +  +KN   +PLGMIIKVKP AKKA+++       G+ ++P       +D
Sbjct: 121 PLPAVQEQK-TAGRKNPPTRPLGMIIKVKPQAKKARID------EGSVKEP-------AD 180

Query: 181 QKQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
             + P V+ EKS    + S       +D  +TGLVSYSD SDDD
Sbjct: 181 IAKAPDVETEKSPDIVRTSNGDTDKSNDVTRTGLVSYSDESDDD 210
[Close]
BLAST of Spo17564.1 vs. NCBI nr
Match: gi|567904244|ref|XP_006444610.1| (hypothetical protein CICLE_v10022224mg [Citrus clementina])

HSP 1 Score: 226.9 bits (577), Expect = 3.600e-56
Identity = 132/224 (58.93%), Postives = 169/224 (75.45%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAE+++  IRLMNF+S+E+LD AK +RGERV+DGTAQRDRPLFEILKENKDK+DAEFNER
Sbjct: 1   MAEESSRPIRLMNFISEEQLDEAKRTRGERVDDGTAQRDRPLFEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFL+K ++SR++YER +ADEE+QQLR FQAAVAAQS IVH++ +T 
Sbjct: 61  FKHRPPKALDEDETEFLEKWDSSRRDYERQVADEEAQQLRSFQAAVAAQSTIVHELKETP 120

Query: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKP-AKKAKVEPSPEPESGAAEKPCAEFQWHSD 180
            +  VQ++K +  +KN   +PLGMIIKVKP AKKA+++       G+ ++P       +D
Sbjct: 121 PLPAVQEQK-TAGRKNPPTRPLGMIIKVKPQAKKARID------EGSVKEP-------AD 180

Query: 181 QKQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
             + P V+ EKS    + S       +D  +TGLVSYSD SDDD
Sbjct: 181 IAKAPDVETEKSPDIVRTSNGDTDKSNDVTRTGLVSYSDESDDD 210
[Close]
BLAST of Spo17564.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYA7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127740 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.600e-116
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER
Sbjct: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120

Query: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ 180
           HVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ
Sbjct: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ 180

Query: 181 KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
           KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD
Sbjct: 181 KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 223
[Close]
BLAST of Spo17564.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0C9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127740 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.500e-114
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER
Sbjct: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120

Query: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ 180
           HVSDV QEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ
Sbjct: 121 HVSDV-QEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSDQ 180

Query: 181 KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
           KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD
Sbjct: 181 KQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 222
[Close]
BLAST of Spo17564.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C370_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g145020 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.500e-73
Identity = 158/224 (70.54%), Postives = 179/224 (79.91%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAED  P IRLMNFVSQEEL+VAK S GER+EDGTAQRDRPL++ILKENKDK DAEFNER
Sbjct: 1   MAEDVPPPIRLMNFVSQEELEVAKRSHGERLEDGTAQRDRPLYDILKENKDKSDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQS-MIVHKVNDT 120
           FKH+PPKALDEDETEFLD+LE SRKEYE+ IADEE+QQL+ FQAAVAAQS M+V++  + 
Sbjct: 61  FKHQPPKALDEDETEFLDRLEKSRKEYEKCIADEEAQQLKSFQAAVAAQSMMVVYEAKEI 120

Query: 121 CHVSDVQQEKESTEKKNRRAQPLGMIIKVKPAKKAKVEPSPEPESGAAEKPCAEFQWHSD 180
             VSD Q+EK + EK+NR  QPLG+IIKVKP KKAKVEPS EPES AA+        H +
Sbjct: 121 RPVSDAQEEKRTMEKRNRPVQPLGVIIKVKPQKKAKVEPSLEPESRAAQN-------HLN 180

Query: 181 QKQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
           Q++T S D EK     KNS   G NIHD LKTGLVSYSDGSDDD
Sbjct: 181 QQRTCSTDKEKHHEPVKNSDGDGGNIHDLLKTGLVSYSDGSDDD 217
[Close]
BLAST of Spo17564.1 vs. UniProtKB/TrEMBL
Match: A0A067H781_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028180mg PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.800e-57
Identity = 134/224 (59.82%), Postives = 169/224 (75.45%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAE+++  IRLMNF+S+E+LD AK +RGERV+DGTAQRDRPLFEILKENKDK+DAEFNER
Sbjct: 1   MAEESSRPIRLMNFISEEQLDEAKRTRGERVDDGTAQRDRPLFEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFL+K ETSR++YER +ADEE+QQLR FQAAVAAQS IVH++ +T 
Sbjct: 61  FKHRPPKALDEDETEFLEKWETSRRDYERQVADEEAQQLRSFQAAVAAQSTIVHELKETP 120

Query: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKP-AKKAKVEPSPEPESGAAEKPCAEFQWHSD 180
            +  VQ++K +  +KN   +PLGMIIKVKP AKKA+++       G+ ++P       +D
Sbjct: 121 PLPAVQEQK-TAGRKNPPTRPLGMIIKVKPQAKKARID------EGSVKEP-------AD 180

Query: 181 QKQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
             + P V+ EKS    + S       +D  +TGLVSYSD SDDD
Sbjct: 181 IAKAPDVETEKSPDIVRTSNGDTDKSNDVTRTGLVSYSDESDDD 210
[Close]
BLAST of Spo17564.1 vs. UniProtKB/TrEMBL
Match: V4U1D6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022224mg PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.500e-56
Identity = 132/224 (58.93%), Postives = 169/224 (75.45%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           MAE+++  IRLMNF+S+E+LD AK +RGERV+DGTAQRDRPLFEILKENKDK+DAEFNER
Sbjct: 1   MAEESSRPIRLMNFISEEQLDEAKRTRGERVDDGTAQRDRPLFEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFL+K ++SR++YER +ADEE+QQLR FQAAVAAQS IVH++ +T 
Sbjct: 61  FKHRPPKALDEDETEFLEKWDSSRRDYERQVADEEAQQLRSFQAAVAAQSTIVHELKETP 120

Query: 121 HVSDVQQEKESTEKKNRRAQPLGMIIKVKP-AKKAKVEPSPEPESGAAEKPCAEFQWHSD 180
            +  VQ++K +  +KN   +PLGMIIKVKP AKKA+++       G+ ++P       +D
Sbjct: 121 PLPAVQEQK-TAGRKNPPTRPLGMIIKVKPQAKKARID------EGSVKEP-------AD 180

Query: 181 QKQTPSVDGEKSQVQFKNSKSHGVNIHDALKTGLVSYSDGSDDD 224
             + P V+ EKS    + S       +D  +TGLVSYSD SDDD
Sbjct: 181 IAKAPDVETEKSPDIVRTSNGDTDKSNDVTRTGLVSYSDESDDD 210
[Close]
BLAST of Spo17564.1 vs. TAIR (Arabidopsis)
Match: AT3G62140.1 (NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331))

HSP 1 Score: 190.3 bits (482), Expect = 1.300e-48
Identity = 123/228 (53.95%), Postives = 152/228 (66.67%), Query Frame = 1 

		  

Query: 1   MAEDAAPQIRLMNFVSQEELDVAKSSRGERVEDGTAQRDRPLFEILKENKDKQDAEFNER 60
           M ++    IRL+NFVS+E+LD +K  RGERVEDGT QRDR L+EILKENKDK+DAEFNER
Sbjct: 1   MVDETEKPIRLLNFVSEEQLDESKKERGERVEDGTFQRDRALYEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSRKEYERLIADEESQQLRGFQAAVAAQSMIVHKVNDTC 120
           FKHRPPKALDEDETEFLDKLE S++EYER +A+EE +QLR FQAAVAA+S I+H+  +  
Sbjct: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQLANEEDEQLRNFQAAVAARSAILHEPKEAA 120

Query: 121 --HVSDVQQEKESTEKKNRRAQPLGMIIKVKP-AKKAKVEPSPEPESGAAEKPCAEFQWH 180
               + V +E++   K+N   +P   IIKVKP  KKAK     E E     KP +    H
Sbjct: 121 LPPPAPVTKEQKPIGKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPAS----H 180

Query: 181 SDQKQTPSVDGEKSQVQFKNSKSHGVNIHDALKTG--LVSYSDGSDDD 224
            DQ    S+D  K  V  K +        + L+TG  LVSYSD S+DD
Sbjct: 181 IDQ---ASLDSVKGNVTGKTT--------EGLQTGLALVSYSDESEDD 213
The following BLAST results are available for this feature:
BLAST of Spo17564.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902193230|gb|KNA12235.1|2.3e-116100.hypothetical protein SOVF_1277... [more]
gi|902193231|gb|KNA12236.1|2.2e-11499.5hypothetical protein SOVF_1277... [more]
gi|731341639|ref|XP_010681995.1|1.2e-7270.5PREDICTED: protein FAM192A [Be... [more]
gi|641868106|gb|KDO86790.1|5.5e-5759.8hypothetical protein CISIN_1g0... [more]
gi|567904244|ref|XP_006444610.1|3.6e-5658.9hypothetical protein CICLE_v10... [more]
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BLAST of Spo17564.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QYA7_SPIOL1.6e-116100.Uncharacterized protein OS=Spi... [more]
A0A0K9R0C9_SPIOL1.5e-11499.5Uncharacterized protein OS=Spi... [more]
A0A0J8C370_BETVU8.5e-7370.5Uncharacterized protein OS=Bet... [more]
A0A067H781_CITSI3.8e-5759.8Uncharacterized protein OS=Cit... [more]
V4U1D6_9ROSI2.5e-5658.9Uncharacterized protein OS=Cit... [more]
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BLAST of Spo17564.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17564.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G62140.11.3e-4853.9NEFA-interacting nuclear prote... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019331FAM192A/Fyv6, N-terminalPFAMPF10187Nefa_Nip30_Ncoord: 25..102
score: 3.0
NoneNo IPR availableunknownCoilCoilcoord: 77..97
scor
NoneNo IPR availablePANTHERPTHR13495NEFA-INTERACTING NUCLEAR PROTEIN NIP30coord: 1..162
score: 2.5E-52coord: 178..223
score: 2.5