Spo02410.1 (mRNA)

Overview
NameSpo02410.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionBet1-like SNARE 1-1 family protein
Locationchr5 : 2089083 .. 2093383 (+)
Sequence length830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAATGGAGTTTGTTTAAGGCATAAACAAAGGGTTAATCAAAAAGGGAAAACCTGATCTTCCTTTTTCAGGTAATGACTCATCATCACTCCTTCCACCCTTTCCCTCAATTTCGTCTTCAAATTCATTTTTCTTAAGATCCCAATTTCCCGTTCATAATTTGGTAAACCCTAAATCACACCCCCAAATCAATTTTTAAATTTATACGGAGTACCAAGTGTGTTTTTCTACTGATTGCTACGTTGTTATTCTTACTACGTTTTTCATTTTCTCTTTTTTCAGATCACTGAAAGCTTCGATCACTGATTACCTGCGCTGTTTTCTTGATCTCTTGCTCCATCTATGAATCCGAGAAGGTTTGCTTATTGATTTTTGGATTTCCTGTTGTTTTTTTGGGCTCAACTGATTGGTTTTATTGCTTATTTTCCCGTTTCCACAATTTTGTCGGCATTTCTGAAGTATGATTAGCGAGAGATTCAATTGGGAAGGGGGTTGTTGATTGATTGAATTCTGAAATTTTTGTTTTGATTTGAATCTTTTGTGGTGCTGAAGCTTTGAAGTTTAGAAATGTGATTCCTTCTATGTGTCATCAATTATCGAGCAATGTTGTGAACTGTATATCCGTGAAAAGGTCGAATGTTGTTCCGACTTTCTAGAATTGTCAGGGGTGGGATTTTGATAAGGATTTCCATGGTGCATGAAGGTAGTTGGTTTCTCATTGGATCATTTTGTTTTTCCTGATTGCAAGTAAAAGAGCTAATATTGTGCTAATTAACTGCTTGCTGATAGCTGGATCTGTAGAAAGAAACAATGGATAAACTATTAACCTCAAAAACTAAATTCCAAACCTGTTCCTGTATTCCCATATTGCTGTAATGGATAGCATATTAGCTTTTAGAACTATGGCAATGGCCTGGTTCTATCTGTGACGCTGTTGTCCATTAATGGAATGTCCAAAATTTTGCCTTCTGAGAGTTCCTGTGTCGTTCACACAATTACATTATACAAGTAATATTTAGTCAAATTACCGTGTTCCTTCCTTCGTGGGTTATGGAATTTGGTTGTACATCGTGCAAAACTTGTTCATGTGTTTGCATTAATGATAGCAAGGTCTGAGGATGCCTAGGAAGCTAGCTGTGCTGGTTTGAAGTTGACATTATATGATATCTATGAACGATGCAAAGATTACGAAGAATCTTTGTGGCATTCGAGTGATTAGTGAAGCTTTTTTATGTTAATTTAGACTTCTTTACAATGCCTGAATATATGATACATATGTATAAAAAGTTCAAGGTGCACCAAGGCGACAGCCGACAGGGGTCTTGATGTCTTGTTGCGCCAAAGTGTGCGTCATTGAAGTGAGACGCGCTGTATAAAGTTTAAAAAACCTAACTGAAGTGTGCCTCGTCACTTTAAGTGCACCTCAGGTGCCGCTTCTTTGAATGCGGCTCACCTAGAACTAAAAAAATGCTTACCCCCTAGCCTTGGCCCGTTTATCATACACTGTGTCTTACTATTAACATGTTCCCCTGAGCACGAGCCTTATTCCCCATATCGTTACAGATCAAGTTAGGTTCTGTTAGGGAATATTCTAACAAAAAATTTGGAGGCGTCGATGTTTTGAAGGGCTTAATGTTTACATTAGTTGTAAAATGATCTACTATCTCCTGCATCAGGGTGAATTGCAAGGAGGTAAAAGAAACCCCATAATGGTGTACGTGTTGCATGTTCTCACATGCTCTTCTGCTTTTTAAGACTTCTAATATTGAGCCAGAGTCTCAAGGCCCTCAAGACATCATTTGATGGCTTAACTTCATCTACCTTATATGATGTGCTGCAAGAACTGTATCCCTCAAAGAGCGGCTTATTTTGATGGTTTTCTTTGTTTATATTTCCACTCTACATGGAATCTTAACCTGACCTTCCCTTTGTTGCAGATTAAGTTTTGTGTTTTACCTGATAGATCTTTGTCTACTCCCTTGAATGTTTGTAATTTTGATGCTTTGTTGATCTCTTTTTTCCTTACTTAACGGCAGAAATGTTTTCATTGGTCATGGTCCTTTACATCTATAGCTAAAGCTTCCAACGATTTCTTGTTTGCTTGCAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGAGTATGTATTTTCTCCTTGGAGAATTGATTGCGTATCTGATTTGCTGCATCTTGGGGCTATGGCTACCTTAACCAGATCCCAATTAATTTATGTCACATTTTCATCCATCTAATGCACTCTTATTTGTGTATGAGTTTAGCTTTTTAGTTTATGTTTTTAACTTTAGGTCTGAAAACTGGTTTTCTTTGAAGAAAATGATTTTGATTTGTGAAAGCTAACGGTATGGTTACCTAATGGCCCTTAAGTCCTTAACTTCTTTTGTCTTCAAACTGCTGGCTTGTCTTTGTGTATCAGTGTATGCCCATGGAAAATTCTTGGGAATATTAGAAATTACAATGTCATTTAGTTGTTTTAGGTAACATTACCATGTGTCATGTAGCTAATGTGAAAGGCTCCTCCATCTCCAGCTTCCTAAGAATTGTATTTGGGTGATAAACATGCACTGGTAATGGAGTTGTTTTGACTCTATATATATCCCACTTTAATCCAGTCTAGAACACAACATAAAAAAGAACCTGGTTTTTGGGCAATTGCAAAATATGCGAAGTGGAAAATGCAGTCTAAGTGATAGGGACTTCCGGACTTGTATCCCTTGATGACTATTAGGCACTTATTCTTGACTACTGGGGAGACAAATGCAATTATGCCGTATTTATTCAGGACTTCGGAAGTTAGGAGGGATGTCAACTTTTGCAAACTACTACGTAGTACTGTTTTACCAACAACTAATAGAATTTGCTAGAGTTGTGTTGACTACTATAATTGTTACACCTAATTATAAATCTAGTGTGTCAACTTGCTGACCAAAGTAACTTTGGGGAGGAAAGTGGAATTATGCCACAATATCAAATTACCAATCTGTTCTCTAAGTTTTAATCTATGCCCAACATAGGTTATCTACTTCAATCTGTTCTCTAAGTTTTAATCTATGCCCAACATAGGTTATCTATTTCTATGCATACCTGAATTCAAGGCCTCTGCTAGGTTGTTCTTTTGCGTCCTTGTTTTTCTATTGTGCTTATATTCATTGACTTGTTCCATTGAAACTTAAAACCCATAATAATGGAGTCAAATAGGCGTGTTTTCTTAGACAACAAAATAAATGCAAAAGGTAAATGGTTACTTATCCCAAATGATGCACTTATTGATGATAAATATAGTAGCCAAAACTAATCTCTTGATTGGGTATTGTGCTACTCGTTGCAGTTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGTATGTTTGTGATAATCACTCACTACTAGCTCCATATCTTGAATGGTATATGTAGTCATTTTGCTACCATATTGAGACTTTTACTTGAACTTATCAAATATACTCTTTTAGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGTAAATTTGATATTCTTATGCATACTCCCTTATCGGCGCGTTTGGTAGCCGGCCATAAATGGTCTCAATGGGAATGAATTTGTATGTAAATTTGTAAGGAAAATCAATATCCATTCCCATGATAATGCTAGTTTACTCATAACAATCTCTTTTTCTTATAAATTTCCATTACCATTTGGGGAGTGGTTTTAGGTTGGAATGCAAATTTATGAAGAAAAAAACCAAGTTTGAGACCAAATCAGACTGTTTTGTGCTGACTAAATTTCCCCTTCTCACTTTGACAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAATCCCCCAAATAGCTAGAAATTGATACAACTCCAGGCTTTGTATCTGAATTGGGTTGCTAGTTCGAGTCTCTTCTTTCTCAGTTACCGTGTTTTTCACATGATATCGGTACATGCCAGATTGTAAAGAAATTATAAAGCTGTGATATGGGTACTTGAATGTATGAAGTTCTTTTGAGTGTGGTTTCAGATGTTTCCAGTTAAATGAATATATTTCTTGCCTTTTTTTTAGCTAAT

mRNA sequence

ATTTAATGGAGTTTGTTTAAGGCATAAACAAAGGGTTAATCAAAAAGGGAAAACCTGATCTTCCTTTTTCAGGTAATGACTCATCATCACTCCTTCCACCCTTTCCCTCAATTTCGTCTTCAAATTCATTTTTCTTAAGATCCCAATTTCCCGTTCATAATTTGATCACTGAAAGCTTCGATCACTGATTACCTGCGCTGTTTTCTTGATCTCTTGCTCCATCTATGAATCCGAGAAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGATTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAATCCCCCAAATAGCTAGAAATTGATACAACTCCAGGCTTTGTATCTGAATTGGGTTGCTAGTTCGAGTCTCTTCTTTCTCAGTTACCGTGTTTTTCACATGATATCGGTACATGCCAGATTGTAAAGAAATTATAAAGCTGTGATATGGGTACTTGAATGTATGAAGTTCTTTTGAGTGTGGTTTCAGATGTTTCCAGTTAAATGAATATATTTCTTGCCTTTTTTTTAGCTAAT

Coding sequence (CDS)

ATGAATCCGAGAAGGGATTATAGAGGCTCTAGAACTTCTGCTTTTGATGGCATTGAGGAGGGAGGTATCAGGGCCTCGTCCTCGTATTCCTCTCATGAAATTGATGAACATGACAATGATACAGCACTTGATGGATTGCAAGACAGAGTTAACCTTCTGAAAAGATTAAGTGGTGACATAAATGAAGAAGTTGATGCTCATAACCGGATGTTGGATAGAATGGGCAACGAGATGGATTCATCACGAGGATTCTTGTCAGGAACTGTGGATCGGTTTAAGCAGGCATTCGAGACCAAATCAAGCAGACGAATGTTTACTCTTGTGGCCTCATTTGTGGTTCTTTTCCTTATTATCTACTATCTTACTAGGTAA

Protein sequence

MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYYLTR
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo02410Spo02410gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo02410.1Spo02410.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo02410.1.exon.1Spo02410.1.exon.1exon
Spo02410.1.exon.2Spo02410.1.exon.2exon
Spo02410.1.exon.3Spo02410.1.exon.3exon
Spo02410.1.exon.4Spo02410.1.exon.4exon
Spo02410.1.exon.5Spo02410.1.exon.5exon
Spo02410.1.exon.6Spo02410.1.exon.6exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo02410.1.utr5p.1Spo02410.1.utr5p.1five_prime_UTR
Spo02410.1.utr5p.2Spo02410.1.utr5p.2five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo02410.1.CDS.1Spo02410.1.CDS.1CDS
Spo02410.1.CDS.2Spo02410.1.CDS.2CDS
Spo02410.1.CDS.3Spo02410.1.CDS.3CDS
Spo02410.1.CDS.4Spo02410.1.CDS.4CDS
Spo02410.1.CDS.5Spo02410.1.CDS.5CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo02410.1.utr3p.1Spo02410.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|902202425|gb|KNA14273.1| (hypothetical protein SOVF_108900 [Spinacia oleracea])

HSP 1 Score: 236.9 bits (603), Expect = 1.900e-59
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY
Sbjct: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|731336362|ref|XP_010679212.1| (PREDICTED: bet1-like SNARE 1-1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 220.7 bits (561), Expect = 1.400e-54
Identity = 112/123 (91.06%), Postives = 119/123 (96.75%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+YRGSR +AFDGIEEGGIRAS SYSSHEIDEHDND ALDGLQDRVNLLKRLSGD+
Sbjct: 1   MNPRREYRGSRVNAFDGIEEGGIRASPSYSSHEIDEHDNDRALDGLQDRVNLLKRLSGDV 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEVDAHNRMLDRMGNEMD+SRGFLSGT+DRFKQAFETKSSRRM TLVASFVVLFLI+YY
Sbjct: 61  HEEVDAHNRMLDRMGNEMDASRGFLSGTMDRFKQAFETKSSRRMLTLVASFVVLFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|225437830|ref|XP_002262985.1| (PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera])

HSP 1 Score: 203.8 bits (517), Expect = 1.800e-49
Identity = 102/123 (82.93%), Postives = 116/123 (94.31%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYRG+R + FDGIEEGGIRASSSYSSHEIDEHDN+ A+DGLQDRVNLLKRL+GDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEV++HNRMLDR+GN+MD+SRG LSGT+DRFK  FET+SSRRMFTLVASFVV+FLIIYY
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRRMFTLVASFVVIFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|729291342|ref|XP_010551548.1| (PREDICTED: bet1-like SNARE 1-1 [Tarenaya hassleriana])

HSP 1 Score: 201.8 bits (512), Expect = 6.800e-49
Identity = 103/123 (83.74%), Postives = 113/123 (91.87%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRD+RG+R+S FDGIEEGGIRA+ SYS HEIDEHDN+ ALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDHRGTRSSVFDGIEEGGIRAAPSYS-HEIDEHDNERALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLDRMGN+MDSSRG LSGT+DRFK  FETKSSRRM TLVASFV LFL++YY
Sbjct: 61  NEEVETHNRMLDRMGNDMDSSRGILSGTMDRFKTVFETKSSRRMLTLVASFVALFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122
[Close]
BLAST of Spo02410.1 vs. NCBI nr
Match: gi|702263921|ref|XP_010038985.1| (PREDICTED: bet1-like SNARE 1-1 [Eucalyptus grandis])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-48
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRD RG+R + FDGIEEGGIRASSSYSSHEIDEH+N+ A+DGLQDRVNLLKRLSGDI
Sbjct: 1   MNTRRDVRGNRAALFDGIEEGGIRASSSYSSHEIDEHENERAMDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLD MGNEMD+SRG LSGT+DRFK  FETKSSRRMF+LVASFVV+FL++YY
Sbjct: 61  NEEVETHNRMLDGMGNEMDASRGVLSGTMDRFKMVFETKSSRRMFSLVASFVVIFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R438_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108900 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.300e-59
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI
Sbjct: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY
Sbjct: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3K4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120810 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.800e-55
Identity = 112/123 (91.06%), Postives = 119/123 (96.75%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+YRGSR +AFDGIEEGGIRAS SYSSHEIDEHDND ALDGLQDRVNLLKRLSGD+
Sbjct: 1   MNPRREYRGSRVNAFDGIEEGGIRASPSYSSHEIDEHDNDRALDGLQDRVNLLKRLSGDV 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEVDAHNRMLDRMGNEMD+SRGFLSGT+DRFKQAFETKSSRRM TLVASFVVLFLI+YY
Sbjct: 61  HEEVDAHNRMLDRMGNEMDASRGFLSGTMDRFKQAFETKSSRRMLTLVASFVVLFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: D7U2W9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02990 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.200e-49
Identity = 102/123 (82.93%), Postives = 116/123 (94.31%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYRG+R + FDGIEEGGIRASSSYSSHEIDEHDN+ A+DGLQDRVNLLKRL+GDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           +EEV++HNRMLDR+GN+MD+SRG LSGT+DRFK  FET+SSRRMFTLVASFVV+FLIIYY
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRRMFTLVASFVVIFLIIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: A0A059D2I5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01517 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.100e-49
Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRD RG+R + FDGIEEGGIRASSSYSSHEIDEH+N+ A+DGLQDRVNLLKRLSGDI
Sbjct: 1   MNTRRDVRGNRAALFDGIEEGGIRASSSYSSHEIDEHENERAMDGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEV+ HNRMLD MGNEMD+SRG LSGT+DRFK  FETKSSRRMF+LVASFVV+FL++YY
Sbjct: 61  NEEVETHNRMLDGMGNEMDASRGVLSGTMDRFKMVFETKSSRRMFSLVASFVVIFLVVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 123
[Close]
BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Match: V4U4K5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022892mg PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.100e-48
Identity = 102/123 (82.93%), Postives = 113/123 (91.87%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MN RRDYR S+ + FDGIEEGGIRASSSYS HEIDEHDN+ AL+GLQDRVNLLKRLSGDI
Sbjct: 1   MNSRRDYRNSKVALFDGIEEGGIRASSSYS-HEIDEHDNERALEGLQDRVNLLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRML+RMGN+MD+SRG LSGT+D+FK  FETKSSRRMFTLVASFVV+FLI+YY
Sbjct: 61  NEEVDTHNRMLERMGNDMDASRGVLSGTMDKFKMVFETKSSRRMFTLVASFVVIFLIVYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122
[Close]
BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Match: BET11_ARATH (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 8.800e-49
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+ RG R+S FDGIEEGGIRA+SSYS HEI+EH+N+ AL+GLQDRV LLKRLSGDI
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYS-HEINEHENERALEGLQDRVILLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRMLDRMGN+MDSSRGFLSGT+DRFK  FETKSSRRM TLVASFV LFL+IYY
Sbjct: 61  NEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122
[Close]
BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Match: BET12_ARATH (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4)

HSP 1 Score: 141.7 bits (356), Expect = 5.200e-33
Identity = 77/126 (61.11%), Postives = 100/126 (79.37%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAF---DGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLS 60
           MN RR+ R SRTS F   DG+EEG +RASSSY+    DE DND AL+ LQDRV+ LKR++
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVT 60

Query: 61  GDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLI 120
           GDI+EEV+ HNR+LD++GN+MDS+RG +SGT++RFK  FE KS+R+   L+A FV+LFLI
Sbjct: 61  GDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLI 120

Query: 121 IYYLTR 124
           +YYL R
Sbjct: 121 MYYLIR 123
[Close]
BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A)

HSP 1 Score: 194.1 bits (492), Expect = 5.000e-50
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAFDGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLSGDI 60
           MNPRR+ RG R+S FDGIEEGGIRA+SSYS HEI+EH+N+ AL+GLQDRV LLKRLSGDI
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYS-HEINEHENERALEGLQDRVILLKRLSGDI 60

Query: 61  NEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLIIYY 120
           NEEVD HNRMLDRMGN+MDSSRGFLSGT+DRFK  FETKSSRRM TLVASFV LFL+IYY
Sbjct: 61  NEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYY 120

Query: 121 LTR 124
           LTR
Sbjct: 121 LTR 122
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BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein)

HSP 1 Score: 141.7 bits (356), Expect = 2.900e-34
Identity = 77/126 (61.11%), Postives = 100/126 (79.37%), Query Frame = 1 

		  

Query: 1   MNPRRDYRGSRTSAF---DGIEEGGIRASSSYSSHEIDEHDNDTALDGLQDRVNLLKRLS 60
           MN RR+ R SRTS F   DG+EEG +RASSSY+    DE DND AL+ LQDRV+ LKR++
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVT 60

Query: 61  GDINEEVDAHNRMLDRMGNEMDSSRGFLSGTVDRFKQAFETKSSRRMFTLVASFVVLFLI 120
           GDI+EEV+ HNR+LD++GN+MDS+RG +SGT++RFK  FE KS+R+   L+A FV+LFLI
Sbjct: 61  GDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLI 120

Query: 121 IYYLTR 124
           +YYL R
Sbjct: 121 MYYLIR 123
The following BLAST results are available for this feature:
BLAST of Spo02410.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902202425|gb|KNA14273.1|1.9e-59100.hypothetical protein SOVF_1089... [more]
gi|731336362|ref|XP_010679212.1|1.4e-5491.0PREDICTED: bet1-like SNARE 1-1... [more]
gi|225437830|ref|XP_002262985.1|1.8e-4982.9PREDICTED: bet1-like SNARE 1-1... [more]
gi|729291342|ref|XP_010551548.1|6.8e-4983.7PREDICTED: bet1-like SNARE 1-1... [more]
gi|702263921|ref|XP_010038985.1|1.2e-4882.1PREDICTED: bet1-like SNARE 1-1... [more]
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BLAST of Spo02410.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R438_SPIOL1.3e-59100.Uncharacterized protein OS=Spi... [more]
A0A0J8F3K4_BETVU9.8e-5591.0Uncharacterized protein OS=Bet... [more]
D7U2W9_VITVI1.2e-4982.9Putative uncharacterized prote... [more]
A0A059D2I5_EUCGR8.1e-4982.1Uncharacterized protein OS=Euc... [more]
V4U4K5_9ROSI3.1e-4882.9Uncharacterized protein OS=Cit... [more]
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BLAST of Spo02410.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
BET11_ARATH8.8e-4982.9Bet1-like SNARE 1-1 OS=Arabido... [more]
BET12_ARATH5.2e-3361.1Bet1-like SNARE 1-2 OS=Arabido... [more]
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BLAST of Spo02410.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G58170.15.0e-5082.9BET1P/SFT1P-like protein 14A[more]
AT4G14455.12.9e-3461.1Target SNARE coiled-coil domai... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 28..95
score: 1.
IPR000727Target SNARE coiled-coil homology domainPROFILEPS50192T_SNAREcoord: 33..95
score: 12
NoneNo IPR availableGENE3D1.20.5.110coord: 30..94
score: 1.1
NoneNo IPR availablePANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 1..123
score: 1.0
NoneNo IPR availablePANTHERPTHR12791:SF34SUBFAMILY NOT NAMEDcoord: 1..123
score: 1.0
NoneNo IPR availableunknownSSF58038SNARE fusion complexcoord: 29..93
score: 2.22

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0015031 protein transport
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0005484 SNAP receptor activity