Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGAGGAGGAGGAGGAGGAGCGTCATTAAAAAGGAAAATTAAAAACAATGAGGGTCCCGCCAAAAATCCAACCGTTTAACATAATTAAACTCCTTCATTCCCCAATCATCACACGACACGTCAACGAAAAACACAATAATCATTTTATTTATTCATCTCAGTCTAACGTTTAAGATTCAAAAATTAAATAAAGGAAAAAGAAAAATAGTATGACATTTCCCGCCTAAATGAGATAATAAAGAGAGGAGGTTTCTCATTCTCTCTCTCACTCTCTTCTTATTCCTTCTGTCTCCGGCCAAATATTCTCTCATCTTTCTCTCTCCATAAACCTGCAACTAAACAATGGAGGATCCCCTGAAAGTTCAACAATCGTCTGTATCTTCTGGTAAGTGTTACGTTTATCTCTTAAATCAAATCAATTTATAGGGTTTGATTCAGGAATTGCGTAACTTATGGAGGTTTTTAATTCATTCTGGTTGCCACCATTTATTTCTGCCTCGCGAATGGAAGTTAATGTCATTTCCGACTTATGAAACTGATTATGGTTTTTGTTTCGTTTTTTTGAATTTGGGGGAAAAGCGAAATCGAAGCTTAGGTATCCGCTGCGTTCTGCTTCGAAATTAAAGGATCAAACTAACAAATCCCCTGAAATTGCTAATAATTTGCCTTCTGCTTCTTCTTCCAAGAGGTAATTCTCTCTTGTTCCGCCAGTTTTCAATTTAATTTTGAGTTTTTAATATTTAATTTAGTTTTACACTACGATTCCTGTAATTGGATAATTCACTATGAAATAATTGAATTTTTGCCATCTTATTCTGGATAATCATAATTGTGCTGAAAATGGAGTTCGCATTGAAATTTGTGATAATGATAATTGTGCTGAAAATGGAGTTCAATAGGAATTTGTATGTGATAAGCATGGAGAATTATCTCCTGAGATTTGGTTAGTGATCGTTTCAATATGCTTAGTTGTCTTACTTGCTGTCGCAATTGTACATTTCCTGTATCAGCATTTCATGTAATATACAGTTTTTCTTTCTGAATTTGTCATAACACATATATTACTATATATAGTATTAGTATACAAGTCCTGTCGTGTCAGCCAAATGGTTATCGCAAGTAGGTTGCTAAGTTGTGTTATGTGGAACATACAATTCCATTAGTTATGAGTTATGACAAGGACCGCGGCATTTGGGTTTGTTTAAGTAGATTGTTCAATAGGGGGTCATGTTATCAGTGAGGAGTTTAGCTTTATCATTTTATCTTGTGTTAGTTGAAGACTAGCAATTGTCATTGATATTTAGTGTTTTTCTGGCTAAGTTTTAGGGTTTTAATGTGGGTCTTCCCCAGCTTTTATGTTGTAGGATAGTTAAAATAATGCGACTTAATGTCAATTTTCACAATGCTGAATAATTTTGTTTTGGATTTTCCAGTAACTGCGAAAAAGCAAGTCATGTTTTGTTTTAATGATGGCGGTTTTCTGTTGTGAATTCATCGTGTTTGTTGTATCTTATCTTTTGCCTCATTGTGGGGTGACATGTCTTCTTCAGAGGGAGGACTGCCAGTGTGAGTAGAAGTGTGAGTGTTCTTGAGCTTTCTGGCAAGGAGAAGGAGAAATCTGCCAAGCCGCCAAGAAGGCTGTCGATTCCTTCAAAGTCATCTGTAAGCCCTCGGCAAAAAACTGCTAACAACATTACTCCAATTTCAGGAGCTAGGTCAAAACGACTGGCTTTTGGTCAGGAAAGATGTGAGACGCCGTTGTCTGATGTTTCTAGATCATCAACGCGTAGGAAGTTCAATATCCTGTCTTCAGCATCATACTGGCTATCACAGATTAAGCTCTCAGAGTCTGCTGCTAATCACTCGATTTCACTCGGCTTCTTCAAGCTTGCCCTTGAGGCAGGATGTGAGGTAATGAGTCTTGGCTTTTTATATAGTGGTTTGTTGTGTAGGAAATGCTAATGTGGGCACTTGTGCATATGTGCAATTACTATAAACTCTTAAACATGACATGTTGCATACAGATGATTCTAGGATTTTACAGGCAGTGCACCTTAGTAAGGTGTATATAGTTACTTGGCATGTAATAAAAAACTTTGTTTACATGATTGGTAGTGCAAGGTTGGTATCATACTCAAAATCTTTGTATAAAACAACTTATTGGTCATAGATTAGAGAACAGTGAACATTATTTTTCAGTTTTTATTGACTACTTTCACATGAATCACATCTGTTATGCATAGCCGTTTTCTGCTGTCTTATGAGGCTATGAGCTAAAGACTATGCTTCGTTTCCATTGTACAAATGGCCTCATTTTCTATTGAAAACACAGAATCTTAGATGCCATACCATGATTAGGCTAACTGTGATTGGTGATTTGAATCATTTGATTTTGTTTTTCTGATTTATATGCTCTTGTTCAGCCTATGCAGAGACTGCGTGAGGAGCTAAAATCCTATGTGCAGAAACACAACCTTGTTGAACTTGGAGAGACTGTCAGAACCTTATTTGAGAGCTACAAAATCTCAGAAACCCCAGAACAATTGCAAGAATCTGTGACCTGCTCTCATGTACCAGAAGATGCTACTAATCTCTCCGGTGAGGATGCTCAGAGTAACTCTTCTACAGCAGCAACCAAAAAGCTCAAACCAAAACCTCTAAACACTGATGTTCAAGCTTCTTCAGCAAAAGCTTCTTCCAAGAAGGAAAATGTACAGCGGATTACTCCAGGAACCAAAACGCGAGCATCTGTTAACCGTGAACTTGTAAAGCCAAAACTAGTCACTGAAAGTGGAGGCAATAACATAAAGAAGAAAGTTCAAAAACCAGTCAAGCAAGAGTCCATCAAACAGGATGAAAATCCAGTCTCTGAAGAAGGTACTTTGCATTATTCTAGCATATTACAGTAATATGATGACATTGTACTATAATCAAACTACAGTCCAACTGACTTGAGGTTAATTTTGCTATTTGCTTGCACTTCACAGTCACGGCCAAATCACTGGATGTGGAAGAAATACTCGAGGGAAACAAAGAAAACATGGTAAACCTTTTCCTCGATCAACTAATGAAAGCATATTGTATCCATGTTTGCTACGCATAGAGAATAACTAGTTTGTTTACTGAATGTTTGTTCGAATTCTGCAGGATGCTCCGTTTATGGGAGAGGTAAGTGTGACAGAAGAAATATAGGCGCATACAGCAACAAGAATGAATGCTTATTATGGTCACTCGTATAAGATTACTGCCTTTGATACTCTTTTAGTAATAGGGTTTGTCTTCATAGTTTTTAGTGGAGGGCTTTCCTGTGTGTAGAAAGGTTTAAACAACAATCAGTTTGTGGTGCAAGATGTTATTTTCTTCCCCCATTTATTTTGATTTTTTCTACAGGTGGGCGTGAATCTTTGCAAATTTGTGTTTGTCTCTTATCATATAGTCATTTGTTAATATAATAATATATTTCTACTTGTCAAA
mRNA sequence
AAGGAGGAGGAGGAGGAGGAGCGTCATTAAAAAGGAAAATTAAAAACAATGAGGGTCCCGCCAAAAATCCAACCGTTTAACATAATTAAACTCCTTCATTCCCCAATCATCACACGACACGTCAACGAAAAACACAATAATCATTTTATTTATTCATCTCAGTCTAACGTTTAAGATTCAAAAATTAAATAAAGGAAAAAGAAAAATAGTATGACATTTCCCGCCTAAATGAGATAATAAAGAGAGGAGGTTTCTCATTCTCTCTCTCACTCTCTTCTTATTCCTTCTGTCTCCGGCCAAATATTCTCTCATCTTTCTCTCTCCATAAACCTGCAACTAAACAATGGAGGATCCCCTGAAAGTTCAACAATCGTCTGTATCTTCTGCGAAATCGAAGCTTAGGTATCCGCTGCGTTCTGCTTCGAAATTAAAGGATCAAACTAACAAATCCCCTGAAATTGCTAATAATTTGCCTTCTGCTTCTTCTTCCAAGAGAGGGAGGACTGCCAGTGTGAGTAGAAGTGTGAGTGTTCTTGAGCTTTCTGGCAAGGAGAAGGAGAAATCTGCCAAGCCGCCAAGAAGGCTGTCGATTCCTTCAAAGTCATCTGTAAGCCCTCGGCAAAAAACTGCTAACAACATTACTCCAATTTCAGGAGCTAGGTCAAAACGACTGGCTTTTGGTCAGGAAAGATGTGAGACGCCGTTGTCTGATGTTTCTAGATCATCAACGCGTAGGAAGTTCAATATCCTGTCTTCAGCATCATACTGGCTATCACAGATTAAGCTCTCAGAGTCTGCTGCTAATCACTCGATTTCACTCGGCTTCTTCAAGCTTGCCCTTGAGGCAGGATGTGAGCCTATGCAGAGACTGCGTGAGGAGCTAAAATCCTATGTGCAGAAACACAACCTTGTTGAACTTGGAGAGACTGTCAGAACCTTATTTGAGAGCTACAAAATCTCAGAAACCCCAGAACAATTGCAAGAATCTGTGACCTGCTCTCATGTACCAGAAGATGCTACTAATCTCTCCGGTGAGGATGCTCAGAGTAACTCTTCTACAGCAGCAACCAAAAAGCTCAAACCAAAACCTCTAAACACTGATGTTCAAGCTTCTTCAGCAAAAGCTTCTTCCAAGAAGGAAAATGTACAGCGGATTACTCCAGGAACCAAAACGCGAGCATCTGTTAACCGTGAACTTGTAAAGCCAAAACTAGTCACTGAAAGTGGAGGCAATAACATAAAGAAGAAAGTTCAAAAACCAGTCAAGCAAGAGTCCATCAAACAGGATGAAAATCCAGTCTCTGAAGAAGTCACGGCCAAATCACTGGATGTGGAAGAAATACTCGAGGGAAACAAAGAAAACATGGATGCTCCGTTTATGGGAGAGGTAAGTGTGACAGAAGAAATATAGGCGCATACAGCAACAAGAATGAATGCTTATTATGGTCACTCGTATAAGATTACTGCCTTTGATACTCTTTTAGTAATAGGGTTTGTCTTCATAGTTTTTAGTGGAGGGCTTTCCTGTGTGTAGAAAGGTTTAAACAACAATCAGTTTGTGGTGCAAGATGTTATTTTCTTCCCCCATTTATTTTGATTTTTTCTACAGGTGGGCGTGAATCTTTGCAAATTTGTGTTTGTCTCTTATCATATAGTCATTTGTTAATATAATAATATATTTCTACTTGTCAAA
Coding sequence (CDS)
ATGGAGGATCCCCTGAAAGTTCAACAATCGTCTGTATCTTCTGCGAAATCGAAGCTTAGGTATCCGCTGCGTTCTGCTTCGAAATTAAAGGATCAAACTAACAAATCCCCTGAAATTGCTAATAATTTGCCTTCTGCTTCTTCTTCCAAGAGAGGGAGGACTGCCAGTGTGAGTAGAAGTGTGAGTGTTCTTGAGCTTTCTGGCAAGGAGAAGGAGAAATCTGCCAAGCCGCCAAGAAGGCTGTCGATTCCTTCAAAGTCATCTGTAAGCCCTCGGCAAAAAACTGCTAACAACATTACTCCAATTTCAGGAGCTAGGTCAAAACGACTGGCTTTTGGTCAGGAAAGATGTGAGACGCCGTTGTCTGATGTTTCTAGATCATCAACGCGTAGGAAGTTCAATATCCTGTCTTCAGCATCATACTGGCTATCACAGATTAAGCTCTCAGAGTCTGCTGCTAATCACTCGATTTCACTCGGCTTCTTCAAGCTTGCCCTTGAGGCAGGATGTGAGCCTATGCAGAGACTGCGTGAGGAGCTAAAATCCTATGTGCAGAAACACAACCTTGTTGAACTTGGAGAGACTGTCAGAACCTTATTTGAGAGCTACAAAATCTCAGAAACCCCAGAACAATTGCAAGAATCTGTGACCTGCTCTCATGTACCAGAAGATGCTACTAATCTCTCCGGTGAGGATGCTCAGAGTAACTCTTCTACAGCAGCAACCAAAAAGCTCAAACCAAAACCTCTAAACACTGATGTTCAAGCTTCTTCAGCAAAAGCTTCTTCCAAGAAGGAAAATGTACAGCGGATTACTCCAGGAACCAAAACGCGAGCATCTGTTAACCGTGAACTTGTAAAGCCAAAACTAGTCACTGAAAGTGGAGGCAATAACATAAAGAAGAAAGTTCAAAAACCAGTCAAGCAAGAGTCCATCAAACAGGATGAAAATCCAGTCTCTGAAGAAGTCACGGCCAAATCACTGGATGTGGAAGAAATACTCGAGGGAAACAAAGAAAACATGGATGCTCCGTTTATGGGAGAGGTAAGTGTGACAGAAGAAATATAG
Protein sequence
MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRSVSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETPLSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREELKSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTAATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIKKKVQKPVKQESIKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEEI
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Spo24406 | Spo24406 | gene |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Spo24406.1 | Spo24406.1-protein | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Spo24406.1.utr5p.1 | Spo24406.1.utr5p.1 | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Spo24406.1.CDS.6 | Spo24406.1.CDS.6 | CDS |
Spo24406.1.CDS.5 | Spo24406.1.CDS.5 | CDS |
Spo24406.1.CDS.4 | Spo24406.1.CDS.4 | CDS |
Spo24406.1.CDS.3 | Spo24406.1.CDS.3 | CDS |
Spo24406.1.CDS.2 | Spo24406.1.CDS.2 | CDS |
Spo24406.1.CDS.1 | Spo24406.1.CDS.1 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Spo24406.1.utr3p.1 | Spo24406.1.utr3p.1 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Spo24406.1.exon.6 | Spo24406.1.exon.6 | exon |
Spo24406.1.exon.5 | Spo24406.1.exon.5 | exon |
Spo24406.1.exon.4 | Spo24406.1.exon.4 | exon |
Spo24406.1.exon.3 | Spo24406.1.exon.3 | exon |
Spo24406.1.exon.2 | Spo24406.1.exon.2 | exon |
Spo24406.1.exon.1 | Spo24406.1.exon.1 | exon |
Homology
BLAST of Spo24406.1 vs. NCBI nr
Match:
gi|902157478|gb|KNA06126.1| (hypothetical protein SOVF_183930 [Spinacia oleracea])
HSP 1 Score: 643.3 bits (1658), Expect = 2.500e-181
Identity = 354/355 (99.72%), Postives = 354/355 (99.72%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRS 60
MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRS
Sbjct: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRS 60
Query: 61 VSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETP 120
VSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETP
Sbjct: 61 VSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETP 120
Query: 121 LSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREEL 180
LSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFF LALEAGCEPMQRLREEL
Sbjct: 121 LSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFNLALEAGCEPMQRLREEL 180
Query: 181 KSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTA 240
KSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTA
Sbjct: 181 KSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTA 240
Query: 241 ATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIK 300
ATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIK
Sbjct: 241 ATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIK 300
Query: 301 KKVQKPVKQESIKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEEI 356
KKVQKPVKQESIKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEEI
Sbjct: 301 KKVQKPVKQESIKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEEI 355
BLAST of Spo24406.1 vs. NCBI nr
Match:
gi|731335126|ref|XP_010678572.1| (PREDICTED: uncharacterized protein LOC104894100 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 477.6 bits (1228), Expect = 1.800e-131
Identity = 276/360 (76.67%), Postives = 308/360 (85.56%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRS 60
ME+PLK QQSS S KSKLRYPLRSASK+KD+TNKSPEIA+N SSSKRGRT+++S+S
Sbjct: 1 MEEPLKNQQSSSSFGKSKLRYPLRSASKVKDETNKSPEIASN----SSSKRGRTSNMSKS 60
Query: 61 VSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETP 120
VSVLELSGK+KEK+AKPPRRLSIPSKS+V+PRQK+A+NITPIS RSKRLA+ QERCETP
Sbjct: 61 VSVLELSGKDKEKAAKPPRRLSIPSKSTVTPRQKSASNITPISETRSKRLAYAQERCETP 120
Query: 121 LSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREEL 180
SDVSRSSTRRKFNILSSASYWLSQIKLSESA HSISL FFKLALEAG EPMQRLREEL
Sbjct: 121 QSDVSRSSTRRKFNILSSASYWLSQIKLSESANKHSISLAFFKLALEAGSEPMQRLREEL 180
Query: 181 KSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTA 240
KSYV +HNL ELGE V++LF+SY+ISET EQLQESV CS+VP+DATNLSGED QS SSTA
Sbjct: 181 KSYVLRHNLGELGENVKSLFDSYEISETVEQLQESVNCSNVPDDATNLSGEDVQSTSSTA 240
Query: 241 ATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIK 300
ATKK K KPLNTD QASSAKASS KEN+QR+ K R+SVNR+ VKP+ VTE+ NNIK
Sbjct: 241 ATKKFKAKPLNTDTQASSAKASS-KENLQRLNTVAKMRSSVNRDPVKPRPVTETTANNIK 300
Query: 301 KKVQKPVKQES------IKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEE 355
KKVQK KQES KQDE PVSE+VTAK D+E+ LEGNKENMDAP M EV VTE+
Sbjct: 301 KKVQKTGKQESNNSEKIKKQDEKPVSEQVTAKPQDMEKTLEGNKENMDAPLMAEVFVTED 355
BLAST of Spo24406.1 vs. NCBI nr
Match:
gi|297734009|emb|CBI15256.3| (unnamed protein product [Vitis vinifera])
HSP 1 Score: 310.8 bits (795), Expect = 3.000e-81
Identity = 197/363 (54.27%), Postives = 252/363 (69.42%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTAS-VSR 60
ME+ +K Q S KSKLRYPLRSA+K K++ + + +N+ S++KRGR S VS+
Sbjct: 1 MEEAIKDQPSV--HGKSKLRYPLRSATKSKEEKQSTADTSNS----SATKRGRIVSKVSQ 60
Query: 61 SVSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCET 120
SVSVL+ S K+ +AKPPRR SIP+KS+VSP K A NITPIS R+KR Q + T
Sbjct: 61 SVSVLDSS--TKDTAAKPPRRFSIPAKSNVSPHMKPAGNITPISETRAKRSVTNQGKIAT 120
Query: 121 PLSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREE 180
P+SDVS+S RR + +SSA+YWLSQIKLSESAA HSISLGFFKLALEAGC+P+QR+REE
Sbjct: 121 PVSDVSKSGNRRNSSYISSATYWLSQIKLSESAAMHSISLGFFKLALEAGCKPLQRMREE 180
Query: 181 LKSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSST 240
LKSY ++++L ELGE+V+ LF SY+ISE EQLQ S TCS VP + T S +D S+SST
Sbjct: 181 LKSYARRNSLGELGESVKELFSSYEISENLEQLQVSETCSQVPGEGTRSSDDDVHSSSST 240
Query: 241 AATKKLKPKPLNTD-VQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNN 300
+T+KLKPK LNTD Q SS S+ KE Q+ P T+ R S+N+ V + V++SG N
Sbjct: 241 RSTRKLKPKSLNTDAAQVSSVTESANKETTQKNNPATRVRGSLNKNSVNTRSVSDSGSRN 300
Query: 301 IKKKVQKPVKQES-------IKQDENPVSEEVTAKSLDVEE-ILEGNKENMDAPFMGEVS 354
+++K QKP KQ+S KQ + +EE SL EE L+ NKENMDAP M E S
Sbjct: 301 LQRKPQKPSKQDSKTEKVVIKKQGKKSANEEGPVNSLPTEETTLQENKENMDAPLMEETS 355
BLAST of Spo24406.1 vs. NCBI nr
Match:
gi|731425830|ref|XP_002273979.2| (PREDICTED: uncharacterized protein LOC100241687 [Vitis vinifera])
HSP 1 Score: 310.8 bits (795), Expect = 3.000e-81
Identity = 197/363 (54.27%), Postives = 252/363 (69.42%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTAS-VSR 60
ME+ +K Q S KSKLRYPLRSA+K K++ + + +N+ S++KRGR S VS+
Sbjct: 25 MEEAIKDQPSV--HGKSKLRYPLRSATKSKEEKQSTADTSNS----SATKRGRIVSKVSQ 84
Query: 61 SVSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCET 120
SVSVL+ S K+ +AKPPRR SIP+KS+VSP K A NITPIS R+KR Q + T
Sbjct: 85 SVSVLDSS--TKDTAAKPPRRFSIPAKSNVSPHMKPAGNITPISETRAKRSVTNQGKIAT 144
Query: 121 PLSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREE 180
P+SDVS+S RR + +SSA+YWLSQIKLSESAA HSISLGFFKLALEAGC+P+QR+REE
Sbjct: 145 PVSDVSKSGNRRNSSYISSATYWLSQIKLSESAAMHSISLGFFKLALEAGCKPLQRMREE 204
Query: 181 LKSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSST 240
LKSY ++++L ELGE+V+ LF SY+ISE EQLQ S TCS VP + T S +D S+SST
Sbjct: 205 LKSYARRNSLGELGESVKELFSSYEISENLEQLQVSETCSQVPGEGTRSSDDDVHSSSST 264
Query: 241 AATKKLKPKPLNTD-VQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNN 300
+T+KLKPK LNTD Q SS S+ KE Q+ P T+ R S+N+ V + V++SG N
Sbjct: 265 RSTRKLKPKSLNTDAAQVSSVTESANKETTQKNNPATRVRGSLNKNSVNTRSVSDSGSRN 324
Query: 301 IKKKVQKPVKQES-------IKQDENPVSEEVTAKSLDVEE-ILEGNKENMDAPFMGEVS 354
+++K QKP KQ+S KQ + +EE SL EE L+ NKENMDAP M E S
Sbjct: 325 LQRKPQKPSKQDSKTEKVVIKKQGKKSANEEGPVNSLPTEETTLQENKENMDAPLMEETS 379
BLAST of Spo24406.1 vs. NCBI nr
Match:
gi|802652896|ref|XP_012080226.1| (PREDICTED: uncharacterized protein LOC105640505 isoform X2 [Jatropha curcas])
HSP 1 Score: 297.4 bits (760), Expect = 3.400e-77
Identity = 189/366 (51.64%), Postives = 250/366 (68.31%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTAS-VSR 60
ME+ +K QQ V KSKLRYPLRSA+K K++ E++N+ S+SKR R AS VS+
Sbjct: 1 MEETVKEQQPVVVPGKSKLRYPLRSATKAKEEKQPVAELSNS----SASKRVRPASSVSK 60
Query: 61 SVSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCET 120
SV +L+LS KEK SAKPPRRLSIP+KS V+ K+ NITPIS R+KR Q R ET
Sbjct: 61 SVGILDLSSKEK--SAKPPRRLSIPTKSGVTTAAKSTGNITPISETRTKRTTNVQGRSET 120
Query: 121 PLSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREE 180
PLSDVSR+S R+KFN+L+S+SYWLSQIKLSESAA HSIS+GFFKLALEAGCEP+QR+R+E
Sbjct: 121 PLSDVSRTSNRKKFNMLASSSYWLSQIKLSESAAKHSISIGFFKLALEAGCEPLQRMRDE 180
Query: 181 LKSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSST 240
LKSYV++H L E+ E+++ LFE Y I E EQ+Q S +CS VPE+ T S ++ S+SST
Sbjct: 181 LKSYVRRHELGEMEESLKELFERYNIGENQEQVQVSESCSQVPEEGTRSSDDEVHSSSST 240
Query: 241 AATKKLKPKPLNTD-VQASSAKASSKKENVQR-ITPGTKTRASVNRELVKPKLVTESGGN 300
T+KL+P+ LN D Q + +KKE ++ T ++ R S+N+ V + V++S G
Sbjct: 241 IGTRKLRPRSLNADAAQVPTVTEPAKKEITKKNTTAASRARGSLNKNRVNSRSVSDSAGG 300
Query: 301 NIKKKVQKPVKQESI-------KQDENPVSEEVTAKS-LDVEEILEGNKENMDAPFMGEV 356
++KK QKP KQE+ KQ + SEE + S E NKEN++ P M E+
Sbjct: 301 KLQKKQQKPSKQETTKEKNKINKQGKKSASEEAGSTSPSSASTSPEENKENVNQPAMEEI 360
BLAST of Spo24406.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9QHT7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_183930 PE=4 SV=1)
HSP 1 Score: 643.3 bits (1658), Expect = 1.800e-181
Identity = 354/355 (99.72%), Postives = 354/355 (99.72%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRS 60
MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRS
Sbjct: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRS 60
Query: 61 VSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETP 120
VSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETP
Sbjct: 61 VSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETP 120
Query: 121 LSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREEL 180
LSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFF LALEAGCEPMQRLREEL
Sbjct: 121 LSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFNLALEAGCEPMQRLREEL 180
Query: 181 KSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTA 240
KSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTA
Sbjct: 181 KSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTA 240
Query: 241 ATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIK 300
ATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIK
Sbjct: 241 ATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIK 300
Query: 301 KKVQKPVKQESIKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEEI 356
KKVQKPVKQESIKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEEI
Sbjct: 301 KKVQKPVKQESIKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEEI 355
BLAST of Spo24406.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8F3N3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115020 PE=4 SV=1)
HSP 1 Score: 477.6 bits (1228), Expect = 1.300e-131
Identity = 276/360 (76.67%), Postives = 308/360 (85.56%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTASVSRS 60
ME+PLK QQSS S KSKLRYPLRSASK+KD+TNKSPEIA+N SSSKRGRT+++S+S
Sbjct: 1 MEEPLKNQQSSSSFGKSKLRYPLRSASKVKDETNKSPEIASN----SSSKRGRTSNMSKS 60
Query: 61 VSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCETP 120
VSVLELSGK+KEK+AKPPRRLSIPSKS+V+PRQK+A+NITPIS RSKRLA+ QERCETP
Sbjct: 61 VSVLELSGKDKEKAAKPPRRLSIPSKSTVTPRQKSASNITPISETRSKRLAYAQERCETP 120
Query: 121 LSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREEL 180
SDVSRSSTRRKFNILSSASYWLSQIKLSESA HSISL FFKLALEAG EPMQRLREEL
Sbjct: 121 QSDVSRSSTRRKFNILSSASYWLSQIKLSESANKHSISLAFFKLALEAGSEPMQRLREEL 180
Query: 181 KSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSSTA 240
KSYV +HNL ELGE V++LF+SY+ISET EQLQESV CS+VP+DATNLSGED QS SSTA
Sbjct: 181 KSYVLRHNLGELGENVKSLFDSYEISETVEQLQESVNCSNVPDDATNLSGEDVQSTSSTA 240
Query: 241 ATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNNIK 300
ATKK K KPLNTD QASSAKASS KEN+QR+ K R+SVNR+ VKP+ VTE+ NNIK
Sbjct: 241 ATKKFKAKPLNTDTQASSAKASS-KENLQRLNTVAKMRSSVNRDPVKPRPVTETTANNIK 300
Query: 301 KKVQKPVKQES------IKQDENPVSEEVTAKSLDVEEILEGNKENMDAPFMGEVSVTEE 355
KKVQK KQES KQDE PVSE+VTAK D+E+ LEGNKENMDAP M EV VTE+
Sbjct: 301 KKVQKTGKQESNNSEKIKKQDEKPVSEQVTAKPQDMEKTLEGNKENMDAPLMAEVFVTED 355
BLAST of Spo24406.1 vs. UniProtKB/TrEMBL
Match:
D7SIE5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g05830 PE=4 SV=1)
HSP 1 Score: 310.8 bits (795), Expect = 2.100e-81
Identity = 197/363 (54.27%), Postives = 252/363 (69.42%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTAS-VSR 60
ME+ +K Q S KSKLRYPLRSA+K K++ + + +N+ S++KRGR S VS+
Sbjct: 1 MEEAIKDQPSV--HGKSKLRYPLRSATKSKEEKQSTADTSNS----SATKRGRIVSKVSQ 60
Query: 61 SVSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCET 120
SVSVL+ S K+ +AKPPRR SIP+KS+VSP K A NITPIS R+KR Q + T
Sbjct: 61 SVSVLDSS--TKDTAAKPPRRFSIPAKSNVSPHMKPAGNITPISETRAKRSVTNQGKIAT 120
Query: 121 PLSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREE 180
P+SDVS+S RR + +SSA+YWLSQIKLSESAA HSISLGFFKLALEAGC+P+QR+REE
Sbjct: 121 PVSDVSKSGNRRNSSYISSATYWLSQIKLSESAAMHSISLGFFKLALEAGCKPLQRMREE 180
Query: 181 LKSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSST 240
LKSY ++++L ELGE+V+ LF SY+ISE EQLQ S TCS VP + T S +D S+SST
Sbjct: 181 LKSYARRNSLGELGESVKELFSSYEISENLEQLQVSETCSQVPGEGTRSSDDDVHSSSST 240
Query: 241 AATKKLKPKPLNTD-VQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESGGNN 300
+T+KLKPK LNTD Q SS S+ KE Q+ P T+ R S+N+ V + V++SG N
Sbjct: 241 RSTRKLKPKSLNTDAAQVSSVTESANKETTQKNNPATRVRGSLNKNSVNTRSVSDSGSRN 300
Query: 301 IKKKVQKPVKQES-------IKQDENPVSEEVTAKSLDVEE-ILEGNKENMDAPFMGEVS 354
+++K QKP KQ+S KQ + +EE SL EE L+ NKENMDAP M E S
Sbjct: 301 LQRKPQKPSKQDSKTEKVVIKKQGKKSANEEGPVNSLPTEETTLQENKENMDAPLMEETS 355
BLAST of Spo24406.1 vs. UniProtKB/TrEMBL
Match:
A0A067K4V0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11597 PE=4 SV=1)
HSP 1 Score: 296.6 bits (758), Expect = 4.100e-77
Identity = 188/367 (51.23%), Postives = 249/367 (67.85%), Query Frame = 1
Query: 1 MEDPLKVQQSSVSSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTAS-VSR 60
ME+ +K QQ V KSKLRYPLRSA+K K++ E++N+ S+SKR R AS VS+
Sbjct: 1 MEETVKEQQPVVVPGKSKLRYPLRSATKAKEEKQPVAELSNS----SASKRVRPASSVSK 60
Query: 61 SVSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQERCET 120
SV +L+LS KEK SAKPPRRLSIP+KS V+ K+ NITPIS R+KR Q R ET
Sbjct: 61 SVGILDLSSKEK--SAKPPRRLSIPTKSGVTTAAKSTGNITPISETRTKRTTNVQGRSET 120
Query: 121 PLSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQRLREE 180
PLSDVSR+S R+KFN+L+S+SYWLSQIKLSESAA HSIS+GFFKLALEAGCEP+QR+R+E
Sbjct: 121 PLSDVSRTSNRKKFNMLASSSYWLSQIKLSESAAKHSISIGFFKLALEAGCEPLQRMRDE 180
Query: 181 LKSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQSNSST 240
LKSYV++H L E+ E+++ LFE Y I E EQ+Q S +CS VPE+ T S ++ S+SST
Sbjct: 181 LKSYVRRHELGEMEESLKELFERYNIGENQEQVQVSESCSQVPEEGTRSSDDEVHSSSST 240
Query: 241 AATKKLKPKPLNTD-VQASSAKASSKKENVQR-ITPGTKTRASVNRELVKPKLVTESGGN 300
T+KL+P+ LN D Q + +KKE ++ T ++ R S+N+ V + V++S G
Sbjct: 241 IGTRKLRPRSLNADAAQVPTVTEPAKKEITKKNTTAASRARGSLNKNRVNSRSVSDSAGG 300
Query: 301 NIKKKVQKPVKQESI-------KQDENPVSEEVTAKS--LDVEEILEGNKENMDAPFMGE 356
++KK QKP KQE+ KQ + SEE + E NKEN++ P M E
Sbjct: 301 KLQKKQQKPSKQETTKEKNKINKQGKKSASEEAAGSTSPSSASTSPEENKENVNQPAMEE 360
BLAST of Spo24406.1 vs. UniProtKB/TrEMBL
Match:
A0A061G423_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_013867 PE=4 SV=1)
HSP 1 Score: 295.4 bits (755), Expect = 9.100e-77
Identity = 183/367 (49.86%), Postives = 248/367 (67.57%), Query Frame = 1
Query: 1 MEDPLKVQQSSV----SSAKSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGR-TA 60
ME+P+K Q S S+ KSKLRYPLRS+ K K++ +A +L ++SSS+RGR T
Sbjct: 1 MEEPVKEQPPSAPFAGSAGKSKLRYPLRSSMKSKEEK----PLAGDLSNSSSSRRGRATP 60
Query: 61 SVSRSVSVLELSGKEKEKSAKPPRRLSIPSKSSVSPRQKTANNITPISGARSKRLAFGQE 120
SVS+SV VL+LS KEKSAKPPRRLSIP+KS+V+P K +TPIS AR+K+ Q
Sbjct: 61 SVSKSVGVLDLS---KEKSAKPPRRLSIPTKSTVTPSPKFVGTVTPISEARAKKSTNVQG 120
Query: 121 RCETPLSDVSRSSTRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEPMQR 180
+ +TPLSD SRS+TRR+F++LSSASYWLSQIKLSESA+ HS+SLGFFKLALEAGCEP+QR
Sbjct: 121 KSDTPLSDASRSATRRRFSVLSSASYWLSQIKLSESASKHSVSLGFFKLALEAGCEPLQR 180
Query: 181 LREELKSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPEDATNLSGEDAQS 240
+R+EL+SY+ +HNL E E + L +SY +SE +Q Q S TCS +PE+ T S ++ S
Sbjct: 181 MRDELRSYLGRHNLGENDEAIMELLKSYNVSENSDQPQVSETCSQLPEEGTRSSDDEVHS 240
Query: 241 NSSTAATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKLVTESG 300
SS ++KLKPK LNTD +S+ A S K+ + + P T+ RA +N+ + V+++G
Sbjct: 241 VSSVVVSRKLKPKSLNTDAAQASSVAESAKKAIPKNNPVTRNRA-LNKNSSNSRSVSDTG 300
Query: 301 GNNIKKKVQKPVKQESIKQDE-------NPVSEEVTAKSLDVEEILEGNKENMDAPFMGE 356
++KK QK +QE +K + +EE E +E +KENMDAP E
Sbjct: 301 SRTVQKKTQKTTRQEPVKGRDRAKRPGIKSANEEDQVSPTAAAETVEEDKENMDAPLTEE 359
BLAST of Spo24406.1 vs. TAIR (Arabidopsis)
Match:
AT5G62550.1 (unknown protein)
HSP 1 Score: 146.7 bits (369), Expect = 2.600e-35
Identity = 128/349 (36.68%), Postives = 192/349 (55.01%), Query Frame = 1
Query: 6 KVQQSSVSSA------KSKLRYPLRSASKLKDQTNKSPEIANNLPSASSSKRGRTAS-VS 65
K + SVSSA SKLRYPLRSA + K+ P+ + ++S +R R S VS
Sbjct: 3 KSMEKSVSSAASGNSINSKLRYPLRSALRSKEGKPPVPDFS----ASSMPRRARVVSAVS 62
Query: 66 RSVSVLELSGKEK-EKSAKPPRRLSIPSK----SSVSPRQKTANNITPISGARSKRLAFG 125
+S +VL+LSGK+ +++ PPRRLSIP+K SSV + +++ + RS+ +
Sbjct: 63 QSTTVLDLSGKKSVDRTKLPPRRLSIPNKPTSNSSVKSVSSSVTSLSEVKPKRSRIVPRS 122
Query: 126 QERCETPLSDVSRSS-TRRKFNILSSASYWLSQIKLSESAANHSISLGFFKLALEAGCEP 185
TP+S RSS TR+K LSS++YWL+ IKL+ES A HSISLGFFKLAL AGCEP
Sbjct: 123 FNETTTPVSSNLRSSVTRKKVEDLSSSTYWLTHIKLAESVAKHSISLGFFKLALHAGCEP 182
Query: 186 MQRLREELKSYVQKHNLVELGETVRTLFESYKISETPEQLQESVTCSHVPED-ATNLSGE 245
+ +++EELK Y +++N+ L + ++ L E Y ISE Q+Q S T S V E+ A +L+ +
Sbjct: 183 LDKMKEELKLYARRNNMDGLADAMKELSELYNISEESNQVQVSETSSVVAEETAMSLNND 242
Query: 246 -DAQSNSSTAATKKLKPKPLNTDVQASSAKASSKKENVQRITPGTKTRASVNRELVKPKL 305
D QS+ ST + + D S + KE + + T + ++ ++
Sbjct: 243 NDVQSSFSTPGNSNITSEITKDDALQDSTVTKTTKEK-DALQDSSVTETTKEKDALQDSS 302
Query: 306 VTESG---GNNIKKKVQKPVKQESIKQDENPVSEEVTAKSLDVEEILEG 337
VTE+ G V + K+E QD + E T + +E + +G
Sbjct: 303 VTETSKEEGALQDSSVTETTKEEDALQDSSVT--ETTKEEQALETVTQG 344
The following BLAST results are available for this feature: