Spo05254.1 (mRNA) | SpinachBase

Overview


Name	Spo05254.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	BnaC09g48000D protein
Location	chr5 : 12344554 .. 12355548 (+)
Sequence length	1589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAAAAAAAAAAAAATCTTCTTCAACCTAATTTCAGTTTTCTGGCGGAAACACTTTCATATAATCAGCAAGTTTGCTTGGGAAACGTGAATATTAGATTGAAATCTCGTTTCCCATTCGTTTCTGGGATGAATTCAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGGCGCGTTCCGAAACGCGTTTCCCGGTTTCCCCGTTCCGGCGTTCCAGGACTTTTCGGAAACGGTAAGTCGTGATTTTTTTGGCGTTTCCGTGCTTCGTAGCTGTGAACTTTGTGAACTCTTCGATCTTTGAAGGTAACCTTTTTTTTTTTCTCTTCTAATTTTGTGACCCACAACTATGGAATGACTTGTTAGATAATCAATGGGTATTTTTTTCAATGAATTTATGGAATGACTTGTTAGAAAGTTATGGAAAATTATGGACATTTTATGAAATTTTCAAGGAATGCTGTATTTAATTTGATGTAGGTGTAAGATTTTATGAAATTTAATTTTATGCCAAAATTTCAAGGAATGCCATATTTAATTTGATGTATGTAAATGTTATGAAATTTTCAAGAAAGTTCAAGGAATGCCATATGTGAAACAACGAATAATTTAGAGAATGAATTTGAGTAGTAGTAATTGTATTGAATAAATTTGTGTATGTTGTGTTTATTGTAAATGCATTTTATTATTTATATTTGTTTAAGCAAAATATGACCTATAACGATTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATAAAACATGTTTTAAGTTTAAAATCAGCCCTTAGTTCTTTTATTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGCCACATGAAACATGTAAATAGTTTGAAATGACAAGTTTGGTTCCTTAGTTCAAAGTTGGGCGAGAAAATGACATTTTAGGCAAAATATGACCTATAACGACCAAATAAGCCTTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATGAAACATGTTTTAAGTTTAAAATCAGCCCTTAGTTCTTTTAGTTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAGTATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCCTGAATATGCCACATAAAACATGTAAATAGTTTGAAATGACAAGTTTGGTTCCTTAGCTCAAAGTTGGGCGAGAAAATGACAATTTAGGCAAAATATGACCTATAACGACCAAATAAGCTCTAGATGTGAGTAAATACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATGAAACATGTTTTAAGTTTAAAATCAACCCTTAGTTCTTTTAGTTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGCCACATAAAACATGTAAATGATTTGAAATGACAAGTTTGGTTCCTTAGCTCAAAGTTGGGCGAGAAAATGACATTTTAGGCAAAATATGACCTATAACGACCAAATAAGCCTTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATAAAACATGTTTTAAGTTTAAAATCAGCCCTTAGCTCTTTTAGTTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGCCACATAAAACATGTAAATAGTTTGAAATAACAAGTTTGGTTCCTTAGTTCAAAGTTGGGCGAGAAAATGATATTTTAGGCAAAATATGACCTATAACGACCAAATAAGCCTTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATCAAACATGTTTTAAGTTTAAAATCAGTCCTTAGTTCTTTTAGTTGAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGACTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGACACATAAAACATGTAAATGGTTTGAAATGACAAGTTTGGTTCCTTAGCTCAAAGTTGGGCGAGGAAATGACATTTTATGCAAAATATGACCTATAACGACCAAATAAGCCTTAGATGTGAGTAACTACATTTGAATGTGTCTTAGCAAGTTCAAACTAAGCTTATAAAACATGTTTTAAGTTTAAAATCAGCCCTTCGTTCTTTTAGTTAAAAAATGGGAGCGAAAATGCCTTATTTGGTCGATATATGACCTATATCGACCAAATATGATTTAAATGTGCTTAAATTGATTAGAATCAGTTTTAGAAACCTTGAATATGCCACATAAAACATGTACATAGTTTGAAATGACAAGTTTGGTTCCTTAGTTCAAAGTTGGGCGAGAAAATGACATTTTAGGCAAAATATGACTTATAACGACCAAAACATGTAAATTAGTGACTGCCTTTGCGGTCGCTATTTCTGTCGGTAAATTTTAGCGACCGCCTTCCAGTCGGAGTTTCCTAAATTACCGTCCAGGTGAACACTGACCGCCTTTTTGCGACCGTTGGCGGTCGCAAAATCTTTTACCAACCGTTTTTCGCGTTTTACCAACTACTTTTGGCGGTCGGAAATTAATCAATTTCTTGTAGTGACATTTTCCTCTCCATCTTCCCGATTAACACTCAATATTAATACACTATTTAATTTATGTATTCTTTCAACTTTCAAAATTGCCTCTATTTAAATCATATATTCTCTCTAAAATCAAAAGCTCAATAAAATTAGAACTTAAAAAGATAGACTAAATAACCACTATACAACCGCCCGTTCTTTCAACGGGCTCAAAAGCTAGTTCTTCAAAAAATTGATCCCAAACAAAAACAATCAGGTTTATTCTTCCACAGTCAGGGGCGGAGCTTCAGGCCACAAAAATGCAGTTTCAGGAAGGCTTTTCATTTTCACGCAATTACGCAAACCCTCTTCTACAGTTCTGTCCGCCGCCGCCCAACTCCCAACTGCCGACTGCCGGAAGTGTTTTGTGAAGGAGTCAATCAGTCCACCGCAAAGAAACGAGCAGCGGAGCAGGTCGTGGCCCTCGTCGAGTCGTCGCCGATTGAAGGAACGTCCCTGCGCGGCTGCGCTAGTTGCTCGCCGTTGTGGAGGGTCGTCGGTCTCGACGTCTCGTCGTTAACTCCATTGCAGATTTGTAGGTACTTAATTCCTTTTTAAATTAAACTTGAACAAATTCAGAAAATAGTTAGGGTTCCTCGCTTTTAATTCCTTGTAAAATTGAATTTAAATTGGTATTCGTGTTTCTACTTGTTTCCTTCCTGTAAATTGTAATCCTGTTGGTTGCTACTTGCTAATTTGCTACTTTAGAAAATGAAAGAGGCGAAGGAGACGAAAAGCAACTAGGCATTTTCGATGCCGCTATTGCGACAGCCCTTCGGGCTATATTTTCGGCTACTCCGCTTATATTCCATACCTAAGGCAAAAAGAAAGGGAGAGATAGGATCTCCTTGCCTTAGACCTTTCTTAGCGGGGAGATCTTCCGTTCTGCGTGCGTGGGAACAGCTCAAACAAAGAAAAGTCTGGTCTAAATTCAGGCACGGCCCGCCCGTCTGCTGCTAGGTCGGGGAATGGCGCCAGTCGAGGGCGCCGCTATGCCCCTTAATCAATCGAATGGTCCTTCGACCCTCGTTTTCTTTTTGCGGCCGGCATAGTATTACGTTTTCAGTGGCATTAGATAATTTAGATTGATATTATTTGTGAATTTGTGCGAACTCTCCCATTAAGGTTGATCATTAATTTGAACCCATTTGGATTATGCAATGCTATTTTGCTTTATTATTATTATTACTGATATGAATGATATTTGTGTCTTAATCTTTTCTTTTTGTGTTGTCAAATCCCTTTGATTGTAAAACACTACAACCTTTATTCTAAAGTGAAAATTTGGATTTAGTTTAGATTCCAACAGTGGATAAAATGCAGAACTCTCAAACTGGTTTGTTTCCCCCCTCTGTTTGTGACTCGTAGAGAACAATTGTAATTTTGAACTATTTTTTCTTTGTAATTGATACATGTTACTTTTGTGATGATTTCTTTTTTTCAAGTATTAAAATTTTATATTTGAGCATTGATTAGTGATTGTATGGTGAGCGGCACTATCCGTGAAATCCTGGCTCCGCCAGTGTCCACAGTTCCACTAGAACTCCTTTAAACCCTACCGGAAAACTGAGCGCGACTGACTGATTTCAGATGGCAGATGTGGCGACACTTTCTCTCTCCTCCCCCACAAACTCCACCTCCGCCGCAACCTCCGCCGCCATCCCGATGCAGCTGTGTTCATTTCTCCAACCTGAAACACCAAAAACCCCAGAAATTCCTCCATCAACGATGAGGTTATGGCGGCCACAAGCTCAGAGAAATCTGCGAAATCAATGGTCCAAATTATCTTCCTCCAGACATCAATGGCACCCTTCTTCTTCTTCCGGTCGAACCCATGCCACCTCTCTAGTTAACTCTTATCTCTCCCACAGGTATTATTTATTATTCCCCCTTTTCAATTTTACTCCTTTTTTTTAAAAAAAAAAATCATGTATTTTCAATAACAACAATGTCAAAGCTCTAATTCCGGTAGGATGGAGTCGGCTGCACGAACTGAAGATTTTATCTTTGTGGTCGTCGACAAAGAACCTCTTCCTCCATTTGCTTCTATTAAGTGTCATATGCAATTCGCAAATTAAACAAGAACTTAGTGTACATGAACTAAAATGAAGTGGGCTATTATTTGAAATTGAGGGATAACATTACTCCATATTGGATAAGTTGTGCATGGAATCAAAATGGGACGTAATTTGATTATTGGATGCTGATTATAAGTTTATAACAACATAATTTGATTAAGTATCATTTTGAGAGCTGATTATAACAGTATAATTAGATTTTCTTAAAGAAATGGCTTCAGAAATTAAGTGGGCTATTATTTGAAATTGAGGGAGTGTGACATTAGTATCGGAGATGTCTCTTGGAATGTTTTTTTATTTTTTATTTTTTGTAATTGATTTTGAAATAAACGGGAAAGAGGTAGCTGTAGATTGCATTGAATTGGAGTTTCTCTTTATGGAATGATGAAAATTGTCGAAATTATTGATGGATCAACACTGTCTGTGTCAATATGGAAAGTGTGATGGATATTTTTATGTCAATATTCAATACATATGAGACAGGGCATTGAAATTTTATCTGCACAGAGATATCTGACCATGTTTAAGATAATTTGGGTTTCCATGCAGATATATGGATGCCATGGATTTGGGTGTTTTGAGTGATATGCCCAATATTCGGAAAAAGGCTTGTTCTAAATTGCTTAAGCAGATGGTTAGTGGGATGATTCACCTTCATTCTTGCTTTCATTTTGTTTTAAGTTGGTATGCTTTTGGCGGTATTGAAACTAGAGGAAATTCTTGCTGATAAGTTGAGCTTCTTTAGTGAGAATCTAGCAAGTTAGTGTGATGTATTTGATTATTGTGATGAAGATACTTTCTATAGTGAATGAAGGAAAACAATGGTGCAATAGTTCTCCAGGAACCCAAAATACAACAAAAACATCAGTTGTTTTTTGTTGGAAGTATCTCTAACTTGATGTGTTTGTCTCATACCAGGAGCTTCAGCGCGACCGACTTTTAACTTCCTACAAGGCTATGGTACGTTTTTTAGACTGAATCGTCAAATTAGCTGGAGAGTATATGTATCACTCAGATCAAAAGCAATGTATATTGGTGTGTCAGAGAAAAGAGTAATAGTAATGCCCAAATATGCTTTTTACTTTTCCATGTCTAGTGTTTCTATACTTCTAAGCCCATAAACACTGATTAAGTGCTTAGTAGGTGTAATATTGCATTGTTAAGATTCGCAGCAAGTATCAAGAGTTGATTCTTTTCTCCATTGCTAAATTTATCAGATTATTGGTGGTAGCGTGCAGGGATTATGCATCTTTAAGTGGAAATAGAGTGATGTCCATGTCTTACATTATTAATTAGGGCTGGATGACATATCTTGTAGGTCGCTGTTGTTATTGACATGACGAATTTGAGCAAATCGATGAGATGCTTCTTGAAAACTACTAGTGGTAGCGCCATTCAACAGTTTTCTAAATTTTCAGAGAACAATGATGATACTGGTGATGGTGGAGGGGCTCCAGTTTTCACATTTTTGTCCATCTCTGCACATGGTATGTTGATAATTGTTGGTTTTTCTAAAGACAGCTTCTTTAAGTAATGAATGCTAACAACTCCATGCGTGACTGCTTGTTCTAGAAATCTAGAATACCTTAGTGCTTGTTCGTTGTTGTATTGTACCCATGGAGTTTTATTTAAAATTTAATGATCATGTACAACACCTTTAACTTCTTAGTCAAATCATTGACAATATAAATGAATAGGGCAGAAGCTCCAAAGGCAGAGAGCAGGACTATCTACTTAAAGAAAACTGATTGAATTCTTTCAGTAATGATGTTAGCTAAAGTAGTTATCATTGTTGACACAATAGATCTTTTTATTAGCAACGAGAATTGAGAAAACATTACCTTACTGAGGGAGTGGGCCGAGGAGTAAATCTATGTGAGAATGTGGCATTTGAATTTAATGGGGCTTATAAAGAGGGGGAATGTTAGACGAATCACGACGAGAAAAAACGTCCTTAAAATTTTTATACTTCTTTGAAAATGTCATGGTGAACTTTTCAGGGTGAAGGGGGTAGTTTATGCACAAACAACAAAGGGCACTTTTGCTTATGATACAACTCATTACTTGGTCAGCCACAGTTCCCCCAGCGGAGGCAAACCTTTGATGGAGTTTGTTTTACTAGAATTGAACTCATTTTTTGCTTTTGTTCCTCCTACACAACTCCATGACCTCAATGGTTAGATTTTTTTCATTTTATTGTGAATGCTTTTCGATTGCACAAAATGAGGATTTTCAAAATTTGATTCCCAACTCAACAGTCAATACTGCAGAGCGTTGCACTACCGTACTCACTAGCTTTGTCCATCACACTGATACATATTATTATGCAGACACAACTAAGACAAATAGCAGATACTGTGAACCAGATGAACTTCATGGCTCCTGCCTTTCTTGATTCTGAATTTCAAAGTAGAATGATTTTCAAGCATGATTATTTGACATTGTGCTATCTCTTTTTATCTTGTCATATCCTGATACGTTTAATCACACTGACGTTTTAGAGATGTTGGCCGAGGAGCTTGTGGAAATGTTCAAACAGGAGCTTGTTTTGAAGGTAACTGGCAGTCAATATAGAATGCACATATTTGTTCACCTTTAGTTTTCAAAATTTGTTCCTTCATTATTCTTACTTTTATCAGCAGCGTTTGCTTGTAGTTGAGCTGCTTGCCAGCAGTTGTCCAGAAAAAGAACAATCCAATCAACTGTGTTGGGAAGATGAACTTTATCACGGCGAAGCTGATGACTTGAACATGTGCAACTTGTACTCAAAAGATACTGCTGAGGCATTTCATCCCAAAATAAGTGGCTGGAAATCGAAAACTTCAAATGTGGAGTCTGAGAAAAACCCAAACCACGATGTTTTGCAGGTATGGTGGAACCAATATGACGTATAAACATATGATTATGTGCCTGTGAGCTATCCATTCTGTTTTTTACACAAAGCGAATCATATATGTCCTGTCAAGTTCGAAGTCTTTTACCAGTCCTGAAAACTAACTCTATGCTTAGCTTTAAGATATTAAGCATGGTACTATTAGCTTACTAGTGTGGAGCTGAAGCATCCCCTGGCTTAGCAGTTCTCTCATGCCTCTTTCTTGTAGCTGACCTACTTAACAAATTAACATAGTGGACATATAAATTGGTACAATTCGTATCTTGGTCTCACAATAGGTCAGGTATTTAGGTTATTCCGAAAGGTGTTCAGTTGTTTTATACAGAAATGGCGCTGGCAGCCTGGCAGCTCCTCCCACTCCCCCCACCTATGTTGCACGGAAACGGGTACGAGAACGGGTACGGGGACGGGTACGAGGACGGAAAACGGCAAAATCAAAATTGCTAAAAACGGGTACGGCAAGGATTCGGCAAAAAAAAAACAAGAATTTTTAATTTTGTAAATGTGGGTTAAAATTTTATTTTTTGTGGGAATTTAAATTTTAGAATCAGTCAAAATTAAAATAGCTAACATCATTAACCCATCAATAGCCAACATCTATACCTAAACAAATAAATAAAGGAATCTCCTCCAAAAAGACAAAATAGTAGGCGGGCCACTAGGCCACTACAATAATAAATAAGTAAAAGAAAAATTTAAAAAAACTAAAGTCAAGAAAAGGATTAAAAGGAACACCTTTAATCTCCGTCCTTCTTTCTCCTTTTCGTCTTCTTCCTCTACTTCAGCCATTATTAAACCTCTTCATCTTCTTCTCACCGCCATTATTTAAAAAAACATCTTCCTTACTAAGGTAGGCAGCCACTATGCAGCCTATGTTCGTCGCGTCGCTCCTCACTTGCTACGAACTACGAAGTTCAAGCACGGCCGGAGCGGCGGGCTGGGCCGGGGCGAGGAAGAAGGCCGACGGCGAGGGAGCAATCGGCGGGCCGCCAAACGACGGCTTCAAATAGACAAAGAGAGGTGAGAGAGAAAGTGGAGAATGGAGATTTGAAAAATAAACCCTAAATTTGAATTTGGGTCTTAAAAATTCAGTTGGGTACTTGATTTATTTCCAAAAACGTACCCAAATCGTACCCAGCCGTACCCACATTTAGCCCACGTACCCACATTTTGGATTCATTTTAGGGACGTTTCCTGGGCGTACCCGTCCCGTACCCGTACCGTACCCGTACACGTACCCGGTACGGGAAACGGGTATTCCCAGGCGTACCCGTGCTTCGTAGCCCCCCACCACCTCCCACCCCCCTCTCAATGTAACCAATACTCAACTGGTCCCTGTAGACCGTCCTGGTAAATTCAAGGAAAAAGAAAGCCTTTAACATTGCATTGCAAAGACTTGGCAGACATACTATCAGTTTATCAGAATACTCATATAGTGGAGCACTTGCTCATATGGTAATGTGGCAACAATCTCTAGAGAAAAAAGAAAGGATCTATCTCTTGTGTCCATCACCCTATCCTTTTCGTTGTTGCCACATTATCCAAGAGTAAATAGCTAGATATTAGTTGCACCTTGTACTTTAACCAGTTACTATGCTATTTAGATTCTGAAACTACACGCTGTCACCTATTTCAACAGATTCTAAGCAAAAACTTCTGAACGTTAGGTGCTGGATGCTACTCATGACAATTATATGTATCTGTTAGGTGTAATTTCACATAGTTTATGTGTTGGTTTGCAATTTTCAACAATGGACNTCCCCCCCCCCCCCCCCCCCCTTTCTAACTCCATGGCTTGCTTTTAATGTTAATCTGCCTCTGACAGGTCTATCTCACAACATGGCTTGCTGAGGTGAATATAGATACATTCAGGTAAAGTATAATAAAAGTAGTAGATGAAAATAACATACGGAAGGAAATCCAAATATACTGTACTACCAGATCACTCTTTCTGTTCATAACATGTATCGCAGAGAGGTTGGGATTCTTTCTGTAGGATTGAACTGAACGACAATGAATTTTAGTGTGAGATTTTAGGATGTTGACACGTACTATTTTTGTTGGAATCATTATCACTGTCTTTTTGTTCGTTCCATAATTGACCTCCCAGTTTAAAGTGCCACGGAGATTAATCAACATGTTGAAAGTAGAATGAAAAATTTAGTAAGAAAAAGCATTGGAATGAAGTGAAAAGGGCTAACCCGTTAAAAAAATAAGTGAAAGGGGGTTGATCCATTGGAAGGAGAAAGTGATTCAACTTATAAAGGAAATGGAAGTATTTATTTTGGGATGGAGGGAATACTTCATTGTGACGGTTAGGAGTTAGGGCAAGTGCAAAGTAATTAGAGCTTGAGATGGAATAATTAGTGGTTAACTTGGCACATCTCCTTATTCAGTTCCCCCAATTTCCCCTCTCTCCTCACTCCTGGTGGAGCCATACACCCGTCTCCCCCTTCCCCCCCAAATACCTTCATCCTTATTTAGCTATCACTTTGCTCAATTACTTCTGACAAAGGGCGTAAAATATATCAATATATTGTATTATTTAATGTTAGAATGATTTAAAAGGTAGGAGGAGAAAAATCCACGTTGACTTCTTGTATGAAGATGGGGTGTGAAATTAATCTGGAATAGAGAATATCTTTATAGCTTATTTACATATCTATCTATCTATCATCTCAATATTATTTTGGCATCCTACTCTTATTGAGTTCTTCCACTTTGCCTGAAGTTTATAGAAAATTCCTAAGCGTTTTGATGTTTTTCATCAGGGTGGAAGAGATTTTTGTCACTGTTGAAGAGGAGCTACGAACGAGCTTTTCATGAGCTTCTCTAATGCTGAGTCTGACATCTACATGAAACAGAGGTTATGTTGGTATATAGTTCATACGGTCAATTTAAAGATTTTGAAGGCTTGGGCTAAATATTTGAGAATTGTGATGGCTCCTTCTAATTCTTTTCTTTTGATTCGAATTATTAGTCTCCATGTTTATGTGTCAACTGAATCATTAAGGTTTGGTTATCACCATTGATTACCGCCTATTAGTTTACTGTATGTATTTCAAAATGACGATGTAATTTTCATATTATGACTTGATATTTTAGTCTGTATAATCGTTTCTTTGAACTGGGAGATTTCGGTGCATTGA

mRNA sequence

CAAAAAAAAAAAAAAAAATCTTCTTCAACCTAATTTCAGTTTTCTGGCGGAAACACTTTCATATAATCAGCAAGTTTGCTTGGGAAACGTGAATATTAGATTGAAATCTCGTTTCCCATTCGTTTCTGGGATGAATTCAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGGCGCGTTCCGAAACGCGTTTCCCGGTTTCCCCGTTCCGGCGTTCCAGGACTTTTCGGAAACGGTAAGTCGTGATTTTTTTGGCGTTTCCGTGCTTCGTAGCTGTGAACTTTGTGAACTCTTCGATCTTTGAAGATGGCAGATGTGGCGACACTTTCTCTCTCCTCCCCCACAAACTCCACCTCCGCCGCAACCTCCGCCGCCATCCCGATGCAGCTGTGTTCATTTCTCCAACCTGAAACACCAAAAACCCCAGAAATTCCTCCATCAACGATGAGGTTATGGCGGCCACAAGCTCAGAGAAATCTGCGAAATCAATGGTCCAAATTATCTTCCTCCAGACATCAATGGCACCCTTCTTCTTCTTCCGGTCGAACCCATGCCACCTCTCTAGTTAACTCTTATCTCTCCCACAGATATATGGATGCCATGGATTTGGGTGTTTTGAGTGATATGCCCAATATTCGGAAAAAGGCTTGTTCTAAATTGCTTAAGCAGATGGAGCTTCAGCGCGACCGACTTTTAACTTCCTACAAGGCTATGGTCGCTGTTGTTATTGACATGACGAATTTGAGCAAATCGATGAGATGCTTCTTGAAAACTACTAGTGGTAGCGCCATTCAACAGTTTTCTAAATTTTCAGAGAACAATGATGATACTGGTGATGGTGGAGGGGCTCCAGTTTTCACATTTTTGTCCATCTCTGCACATGAGATGTTGGCCGAGGAGCTTGTGGAAATGTTCAAACAGGAGCTTGTTTTGAAGCGTTTGCTTGTAGTTGAGCTGCTTGCCAGCAGTTGTCCAGAAAAAGAACAATCCAATCAACTGTGTTGGGAAGATGAACTTTATCACGGCGAAGCTGATGACTTGAACATGTGCAACTTGTACTCAAAAGATACTGCTGAGGCATTTCATCCCAAAATAAGTGGCTGGAAATCGAAAACTTCAAATGTGGAGTCTGAGAAAAACCCAAACCACGATGTTTTGCAGGTCTATCTCACAACATGGCTTGCTGAGGTGAATATAGATACATTCAGGGTGGAAGAGATTTTTGTCACTGTTGAAGAGGAGCTACGAACGAGCTTTTCATGAGCTTCTCTAATGCTGAGTCTGACATCTACATGAAACAGAGGTTATGTTGGTATATAGTTCATACGGTCAATTTAAAGATTTTGAAGGCTTGGGCTAAATATTTGAGAATTGTGATGGCTCCTTCTAATTCTTTTCTTTTGATTCGAATTATTAGTCTCCATGTTTATGTGTCAACTGAATCATTAAGGTTTGGTTATCACCATTGATTACCGCCTATTAGTTTACTGTATGTATTTCAAAATGACGATGTAATTTTCATATTATGACTTGATATTTTAGTCTGTATAATCGTTTCTTTGAACTGGGAGATTTCGGTGCATTGA

Coding sequence (CDS)

ATGGCAGATGTGGCGACACTTTCTCTCTCCTCCCCCACAAACTCCACCTCCGCCGCAACCTCCGCCGCCATCCCGATGCAGCTGTGTTCATTTCTCCAACCTGAAACACCAAAAACCCCAGAAATTCCTCCATCAACGATGAGGTTATGGCGGCCACAAGCTCAGAGAAATCTGCGAAATCAATGGTCCAAATTATCTTCCTCCAGACATCAATGGCACCCTTCTTCTTCTTCCGGTCGAACCCATGCCACCTCTCTAGTTAACTCTTATCTCTCCCACAGATATATGGATGCCATGGATTTGGGTGTTTTGAGTGATATGCCCAATATTCGGAAAAAGGCTTGTTCTAAATTGCTTAAGCAGATGGAGCTTCAGCGCGACCGACTTTTAACTTCCTACAAGGCTATGGTCGCTGTTGTTATTGACATGACGAATTTGAGCAAATCGATGAGATGCTTCTTGAAAACTACTAGTGGTAGCGCCATTCAACAGTTTTCTAAATTTTCAGAGAACAATGATGATACTGGTGATGGTGGAGGGGCTCCAGTTTTCACATTTTTGTCCATCTCTGCACATGAGATGTTGGCCGAGGAGCTTGTGGAAATGTTCAAACAGGAGCTTGTTTTGAAGCGTTTGCTTGTAGTTGAGCTGCTTGCCAGCAGTTGTCCAGAAAAAGAACAATCCAATCAACTGTGTTGGGAAGATGAACTTTATCACGGCGAAGCTGATGACTTGAACATGTGCAACTTGTACTCAAAAGATACTGCTGAGGCATTTCATCCCAAAATAAGTGGCTGGAAATCGAAAACTTCAAATGTGGAGTCTGAGAAAAACCCAAACCACGATGTTTTGCAGGTCTATCTCACAACATGGCTTGCTGAGGTGAATATAGATACATTCAGGGTGGAAGAGATTTTTGTCACTGTTGAAGAGGAGCTACGAACGAGCTTTTCATGA

Protein sequence

MADVATLSLSSPTNSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHEMLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSKDTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEELRTSFS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo05254	Spo05254	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo05254.1	Spo05254.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05254.1.exon.1	Spo05254.1.exon.1	exon
Spo05254.1.exon.2	Spo05254.1.exon.2	exon
Spo05254.1.exon.3	Spo05254.1.exon.3	exon
Spo05254.1.exon.4	Spo05254.1.exon.4	exon
Spo05254.1.exon.5	Spo05254.1.exon.5	exon
Spo05254.1.exon.6	Spo05254.1.exon.6	exon
Spo05254.1.exon.7	Spo05254.1.exon.7	exon
Spo05254.1.exon.8	Spo05254.1.exon.8	exon
Spo05254.1.exon.9	Spo05254.1.exon.9	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05254.1.utr5p.1	Spo05254.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05254.1.CDS.1	Spo05254.1.CDS.1	CDS
Spo05254.1.CDS.2	Spo05254.1.CDS.2	CDS
Spo05254.1.CDS.3	Spo05254.1.CDS.3	CDS
Spo05254.1.CDS.4	Spo05254.1.CDS.4	CDS
Spo05254.1.CDS.5	Spo05254.1.CDS.5	CDS
Spo05254.1.CDS.6	Spo05254.1.CDS.6	CDS
Spo05254.1.CDS.7	Spo05254.1.CDS.7	CDS
Spo05254.1.CDS.8	Spo05254.1.CDS.8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05254.1.utr3p.1	Spo05254.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|731365997|ref|XP_010694827.1| (PREDICTED: uncharacterized protein LOC104907579 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 418.7 bits (1075), Expect = 9.100e-114
Identity = 228/311 (73.31%), Postives = 254/311 (81.67%), Query Frame = 1

		  
Query: 9   LSSPTNSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSS 68
           L SP+ S+S   S +IPM   S  QP+ PK  E  P  +RLWRPQAQRNLRNQWSKLSS 
Sbjct: 6   LVSPSLSSS---SISIPMYAYSCFQPQAPKFSEHSPM-LRLWRPQAQRNLRNQWSKLSSL 65

Query: 69  RHQWHPSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDR 128
           RHQW+PSS+SGRTHATSLVNSYLS+RYMDAMDLGVLSDMP IRKKACSKLLKQ+E +R++
Sbjct: 66  RHQWYPSSTSGRTHATSLVNSYLSYRYMDAMDLGVLSDMPIIRKKACSKLLKQLEFERNQ 125

Query: 129 LLTSYKAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLS 188
           LL+SYKAMV  V+ M N SKSMRCFLK T GS   QFSK SEN DDTGDGGGAPVFT+ S
Sbjct: 126 LLSSYKAMVTAVVGMENSSKSMRCFLKATGGSPFIQFSKSSENGDDTGDGGGAPVFTYFS 185

Query: 189 ISAHEMLAEELVEMFKQELVLKRLLVVELLASSCPEKEQS-NQLCWEDELYHGEADDLNM 248
           ISA E  A ELV+MFKQEL+LKRLLVVELLA+ C E EQ  NQ  W DELYHGEA+DL+M
Sbjct: 186 ISAFESFAAELVQMFKQELLLKRLLVVELLANICLETEQEFNQFSWADELYHGEAEDLSM 245

Query: 249 CNLYSKDTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFV 308
           CNLYSK T E F PK+SGWKS+TS + SEKNP+H VLQVYLTTWLAEVNID+ RVEEIFV
Sbjct: 246 CNLYSKVTDEPFLPKVSGWKSETSYMRSEKNPDHSVLQVYLTTWLAEVNIDSSRVEEIFV 305

Query: 309 TVEEELRTSFS 319
           TV  ELRT+ S
Sbjct: 306 TVGGELRTTLS 312

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|731425481|ref|XP_010663265.1| (PREDICTED: uncharacterized protein LOC100251942 isoform X1 [Vitis vinifera])

HSP 1 Score: 340.5 bits (872), Expect = 3.200e-90
Identity = 183/300 (61.00%), Postives = 223/300 (74.33%), Query Frame = 1

		  
Query: 14  NSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWH 73
           +STS+ +S+A      S LQ  + KTP+ PPS +RLWRP AQRNLRNQWSKL+S R QW 
Sbjct: 5   DSTSSCSSSA------SNLQSPSSKTPQPPPSVIRLWRPAAQRNLRNQWSKLASYRQQWT 64

Query: 74  PSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSY 133
            ++S GR+HAT LVN+YLS RYM AM+LGVLSDMPNIRKKAC KLLKQ  L   +LL++Y
Sbjct: 65  STASKGRSHATDLVNAYLSLRYMPAMELGVLSDMPNIRKKACMKLLKQQGLHGSKLLSAY 124

Query: 134 KAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHE 193
           K MVAVV  M N S+SMRCFLK TS S + QFS  SE+ +D GDGGG P F F  IS+ E
Sbjct: 125 KDMVAVVTHMVNTSRSMRCFLKGTSSSPLVQFSSLSEDTNDLGDGGGTPAFLFWPISSFE 184

Query: 194 MLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSK 253
            LAEELV+MF  EL LKRLLVVELL+ SC E  Q ++ CW DELY GE DDL +C+L+SK
Sbjct: 185 KLAEELVQMFILELNLKRLLVVELLSISCEEAPQDDRYCWSDELYPGEFDDLGICSLHSK 244

Query: 254 DTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEEL 313
           +  E   PKI G++S +  + S + P+H++LQVYLTTWLAEVNIDT RV+EIF  + EE+
Sbjct: 245 EIGELIPPKIIGFESHSPVIRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEM 298

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|731425489|ref|XP_010663270.1| (PREDICTED: uncharacterized protein LOC100262180 isoform X1 [Vitis vinifera])

HSP 1 Score: 332.4 bits (851), Expect = 8.600e-88
Identity = 180/305 (59.02%), Postives = 220/305 (72.13%), Query Frame = 1

		  
Query: 14  NSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWH 73
           ++TS+ +S++      S LQ  + KTP  PPS + LWRP AQRNLRNQWSKL+S R QW 
Sbjct: 5   DATSSCSSSS------SNLQSPSSKTPTRPPSVICLWRPAAQRNLRNQWSKLASYRQQWT 64

Query: 74  PSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSY 133
            ++S GR+HAT LVNSYLS RYM AM+LGVLSDMPNIRKKAC KLLKQ  L   +LL++Y
Sbjct: 65  STASKGRSHATDLVNSYLSQRYMPAMELGVLSDMPNIRKKACMKLLKQQGLHGSKLLSAY 124

Query: 134 KAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHE 193
           K MVAVV  M N S+SMRCFLK TS S + QFS  SE+ +D GDGGG P F F  IS+ E
Sbjct: 125 KDMVAVVTHMVNTSRSMRCFLKGTSSSPLVQFSSLSEDTNDLGDGGGTPAFLFWPISSFE 184

Query: 194 MLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSK 253
            LAEELV+MF  EL LKRLLVVEL + SC E  Q ++ CW DELY GE DD  +C+L+SK
Sbjct: 185 KLAEELVQMFILELNLKRLLVVELHSISCEEAPQKDRYCWSDELYPGEFDDWGICSLHSK 244

Query: 254 DTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEEL 313
           +  E   PKI G++S +  + S + P+H++LQVYLTTWLAEVNIDT RV+EIF  + EE+
Sbjct: 245 EIGELIPPKIIGFESHSLVIRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEM 303

Query: 314 RTSFS 319
               S
Sbjct: 305 HVGLS 303

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|902165985|gb|KNA07184.1| (hypothetical protein SOVF_174230 [Spinacia oleracea])

HSP 1 Score: 330.5 bits (846), Expect = 3.300e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1

		  
Query: 26  MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS 85
           MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS
Sbjct: 1   MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS 60

Query: 86  LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN 145
           LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN
Sbjct: 61  LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN 120

Query: 146 LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH 193
           LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH
Sbjct: 121 LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH 167

[Close]

BLAST of Spo05254.1 vs. NCBI nr
Match: gi|731366003|ref|XP_010694831.1| (PREDICTED: uncharacterized protein LOC104907579 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 322.4 bits (825), Expect = 8.900e-85
Identity = 170/226 (75.22%), Postives = 188/226 (83.19%), Query Frame = 1

		  
Query: 94  RYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTNLSKSMRCF 153
           RYMDAMDLGVLSDMP IRKKACSKLLKQ+E +R++LL+SYKAMV  V+ M N SKSMRCF
Sbjct: 7   RYMDAMDLGVLSDMPIIRKKACSKLLKQLEFERNQLLSSYKAMVTAVVGMENSSKSMRCF 66

Query: 154 LKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHEMLAEELVEMFKQELVLKRLL 213
           LK T GS   QFSK SEN DDTGDGGGAPVFT+ SISA E  A ELV+MFKQEL+LKRLL
Sbjct: 67  LKATGGSPFIQFSKSSENGDDTGDGGGAPVFTYFSISAFESFAAELVQMFKQELLLKRLL 126

Query: 214 VVELLASSCPEKEQS-NQLCWEDELYHGEADDLNMCNLYSKDTAEAFHPKISGWKSKTSN 273
           VVELLA+ C E EQ  NQ  W DELYHGEA+DL+MCNLYSK T E F PK+SGWKS+TS 
Sbjct: 127 VVELLANICLETEQEFNQFSWADELYHGEAEDLSMCNLYSKVTDEPFLPKVSGWKSETSY 186

Query: 274 VESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEELRTSFS 319
           + SEKNP+H VLQVYLTTWLAEVNID+ RVEEIFVTV  ELRT+ S
Sbjct: 187 MRSEKNPDHSVLQVYLTTWLAEVNIDSSRVEEIFVTVGGELRTTLS 232

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BDN8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095820 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 6.400e-114
Identity = 228/311 (73.31%), Postives = 254/311 (81.67%), Query Frame = 1

		  
Query: 9   LSSPTNSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSS 68
           L SP+ S+S   S +IPM   S  QP+ PK  E  P  +RLWRPQAQRNLRNQWSKLSS 
Sbjct: 6   LVSPSLSSS---SISIPMYAYSCFQPQAPKFSEHSPM-LRLWRPQAQRNLRNQWSKLSSL 65

Query: 69  RHQWHPSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDR 128
           RHQW+PSS+SGRTHATSLVNSYLS+RYMDAMDLGVLSDMP IRKKACSKLLKQ+E +R++
Sbjct: 66  RHQWYPSSTSGRTHATSLVNSYLSYRYMDAMDLGVLSDMPIIRKKACSKLLKQLEFERNQ 125

Query: 129 LLTSYKAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLS 188
           LL+SYKAMV  V+ M N SKSMRCFLK T GS   QFSK SEN DDTGDGGGAPVFT+ S
Sbjct: 126 LLSSYKAMVTAVVGMENSSKSMRCFLKATGGSPFIQFSKSSENGDDTGDGGGAPVFTYFS 185

Query: 189 ISAHEMLAEELVEMFKQELVLKRLLVVELLASSCPEKEQS-NQLCWEDELYHGEADDLNM 248
           ISA E  A ELV+MFKQEL+LKRLLVVELLA+ C E EQ  NQ  W DELYHGEA+DL+M
Sbjct: 186 ISAFESFAAELVQMFKQELLLKRLLVVELLANICLETEQEFNQFSWADELYHGEAEDLSM 245

Query: 249 CNLYSKDTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFV 308
           CNLYSK T E F PK+SGWKS+TS + SEKNP+H VLQVYLTTWLAEVNID+ RVEEIFV
Sbjct: 246 CNLYSKVTDEPFLPKVSGWKSETSYMRSEKNPDHSVLQVYLTTWLAEVNIDSSRVEEIFV 305

Query: 309 TVEEELRTSFS 319
           TV  ELRT+ S
Sbjct: 306 TVGGELRTTLS 312

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: D7SI28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07130 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.200e-90
Identity = 183/300 (61.00%), Postives = 223/300 (74.33%), Query Frame = 1

		  
Query: 14  NSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWH 73
           +STS+ +S+A      S LQ  + KTP+ PPS +RLWRP AQRNLRNQWSKL+S R QW 
Sbjct: 5   DSTSSCSSSA------SNLQSPSSKTPQPPPSVIRLWRPAAQRNLRNQWSKLASYRQQWT 64

Query: 74  PSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSY 133
            ++S GR+HAT LVN+YLS RYM AM+LGVLSDMPNIRKKAC KLLKQ  L   +LL++Y
Sbjct: 65  STASKGRSHATDLVNAYLSLRYMPAMELGVLSDMPNIRKKACMKLLKQQGLHGSKLLSAY 124

Query: 134 KAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHE 193
           K MVAVV  M N S+SMRCFLK TS S + QFS  SE+ +D GDGGG P F F  IS+ E
Sbjct: 125 KDMVAVVTHMVNTSRSMRCFLKGTSSSPLVQFSSLSEDTNDLGDGGGTPAFLFWPISSFE 184

Query: 194 MLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSK 253
            LAEELV+MF  EL LKRLLVVELL+ SC E  Q ++ CW DELY GE DDL +C+L+SK
Sbjct: 185 KLAEELVQMFILELNLKRLLVVELLSISCEEAPQDDRYCWSDELYPGEFDDLGICSLHSK 244

Query: 254 DTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEEL 313
           +  E   PKI G++S +  + S + P+H++LQVYLTTWLAEVNIDT RV+EIF  + EE+
Sbjct: 245 EIGELIPPKIIGFESHSPVIRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEM 298

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: D7SI27_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07140 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.000e-88
Identity = 180/305 (59.02%), Postives = 220/305 (72.13%), Query Frame = 1

		  
Query: 14  NSTSAATSAAIPMQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWH 73
           ++TS+ +S++      S LQ  + KTP  PPS + LWRP AQRNLRNQWSKL+S R QW 
Sbjct: 5   DATSSCSSSS------SNLQSPSSKTPTRPPSVICLWRPAAQRNLRNQWSKLASYRQQWT 64

Query: 74  PSSSSGRTHATSLVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSY 133
            ++S GR+HAT LVNSYLS RYM AM+LGVLSDMPNIRKKAC KLLKQ  L   +LL++Y
Sbjct: 65  STASKGRSHATDLVNSYLSQRYMPAMELGVLSDMPNIRKKACMKLLKQQGLHGSKLLSAY 124

Query: 134 KAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHE 193
           K MVAVV  M N S+SMRCFLK TS S + QFS  SE+ +D GDGGG P F F  IS+ E
Sbjct: 125 KDMVAVVTHMVNTSRSMRCFLKGTSSSPLVQFSSLSEDTNDLGDGGGTPAFLFWPISSFE 184

Query: 194 MLAEELVEMFKQELVLKRLLVVELLASSCPEKEQSNQLCWEDELYHGEADDLNMCNLYSK 253
            LAEELV+MF  EL LKRLLVVEL + SC E  Q ++ CW DELY GE DD  +C+L+SK
Sbjct: 185 KLAEELVQMFILELNLKRLLVVELHSISCEEAPQKDRYCWSDELYPGEFDDWGICSLHSK 244

Query: 254 DTAEAFHPKISGWKSKTSNVESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEEL 313
           +  E   PKI G++S +  + S + P+H++LQVYLTTWLAEVNIDT RV+EIF  + EE+
Sbjct: 245 EIGELIPPKIIGFESHSLVIRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEM 303

Query: 314 RTSFS 319
               S
Sbjct: 305 HVGLS 303

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIV7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_174230 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.300e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1

		  
Query: 26  MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS 85
           MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS
Sbjct: 1   MQLCSFLQPETPKTPEIPPSTMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATS 60

Query: 86  LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN 145
           LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN
Sbjct: 61  LVNSYLSHRYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTN 120

Query: 146 LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH 193
           LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH
Sbjct: 121 LSKSMRCFLKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAH 167

[Close]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9U7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095820 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.200e-85
Identity = 170/226 (75.22%), Postives = 188/226 (83.19%), Query Frame = 1

		  
Query: 94  RYMDAMDLGVLSDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTNLSKSMRCF 153
           RYMDAMDLGVLSDMP IRKKACSKLLKQ+E +R++LL+SYKAMV  V+ M N SKSMRCF
Sbjct: 94  RYMDAMDLGVLSDMPIIRKKACSKLLKQLEFERNQLLSSYKAMVTAVVGMENSSKSMRCF 153

Query: 154 LKTTSGSAIQQFSKFSENNDDTGDGGGAPVFTFLSISAHEMLAEELVEMFKQELVLKRLL 213
           LK T GS   QFSK SEN DDTGDGGGAPVFT+ SISA E  A ELV+MFKQEL+LKRLL
Sbjct: 154 LKATGGSPFIQFSKSSENGDDTGDGGGAPVFTYFSISAFESFAAELVQMFKQELLLKRLL 213

Query: 214 VVELLASSCPEKEQS-NQLCWEDELYHGEADDLNMCNLYSKDTAEAFHPKISGWKSKTSN 273
           VVELLA+ C E EQ  NQ  W DELYHGEA+DL+MCNLYSK T E F PK+SGWKS+TS 
Sbjct: 214 VVELLANICLETEQEFNQFSWADELYHGEAEDLSMCNLYSKVTDEPFLPKVSGWKSETSY 273

Query: 274 VESEKNPNHDVLQVYLTTWLAEVNIDTFRVEEIFVTVEEELRTSFS 319
           + SEKNP+H VLQVYLTTWLAEVNID+ RVEEIFVTV  ELRT+ S
Sbjct: 274 MRSEKNPDHSVLQVYLTTWLAEVNIDSSRVEEIFVTVGGELRTTLS 319

[Close]

BLAST of Spo05254.1 vs. TAIR (Arabidopsis)
Match: AT5G07950.1 (unknown protein)

HSP 1 Score: 281.6 bits (719), Expect = 6.100e-76
Identity = 150/273 (54.95%), Postives = 196/273 (71.79%), Query Frame = 1

		  
Query: 45  STMRLWRPQAQRNLRNQWSKLSSSRHQWHPSSSSGRTHATSLVNSYLSHRYMDAMDLGVL 104
           S+MRLWRP AQRNLRNQWS LS+ R QW  + S+GR+HAT LVNSYLS +YM  M+LGVL
Sbjct: 33  SSMRLWRPAAQRNLRNQWSNLSNCRQQWIVACSAGRSHATLLVNSYLSQKYMPMMELGVL 92

Query: 105 SDMPNIRKKACSKLLKQMELQRDRLLTSYKAMVAVVIDMTNLSKSMRCFLKTTSGSAIQQ 164
           SDM +I KKA  KL  Q    R +LL+SYK MVAVV++M N S+S+RC+ K ++GS I Q
Sbjct: 93  SDMFDIDKKALKKLFTQQSSYRIKLLSSYKEMVAVVVEMVNASRSLRCYTKLSTGSLI-Q 152

Query: 165 FSKFSENNDDTGDGGGAPVFTFLSISAHEMLAEELVEMFKQELVLKRLLVVELLASSCPE 224
           FS   E+++D GD GG PVF F ++SA E +AEELVEMFK+E++LKRLL++EL++ S   
Sbjct: 153 FSGTKEDSNDAGDCGGIPVFNFWNVSAFEKMAEELVEMFKREVMLKRLLIMELISLSTEV 212

Query: 225 KEQSNQLCWEDELYHGEADDLNMCNLYSKDTAEAFHPKISGWKSKTSNVESEKNPNHDVL 284
            +  N   W DELYHGE D L  C+LYS + A+   P++  +   +S++     P  ++L
Sbjct: 213 PQPINN-SWSDELYHGEFDHLTKCSLYSMEVAKPVLPRVKDYNIGSSSISHTNQPTAEIL 272

Query: 285 QVYLTTWLAEVNIDTFRVEEIFVTVEEELRTSF 318
           Q+YLTTWLAEVNIDT RV+EI   V EE+R +F
Sbjct: 273 QIYLTTWLAEVNIDTHRVDEILALVGEEIRVTF 303

The following BLAST results are available for this feature:

BLAST of Spo05254.1 vs. NCBI nr
BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
BLAST of Spo05254.1 vs. ExPASy Swiss-Prot
BLAST of Spo05254.1 vs. TAIR (Arabidopsis)

BLAST of Spo05254.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|731365997\|ref\|XP_010694827.1\|	9.1e-114	73.3	PREDICTED: uncharacterized pro...	[more]
gi\|731425481\|ref\|XP_010663265.1\|	3.2e-90	61.0	PREDICTED: uncharacterized pro...	[more]
gi\|731425489\|ref\|XP_010663270.1\|	8.6e-88	59.0	PREDICTED: uncharacterized pro...	[more]
gi\|902165985\|gb\|KNA07184.1\|	3.3e-87	100.	hypothetical protein SOVF_1742...	[more]
gi\|731366003\|ref\|XP_010694831.1\|	8.9e-85	75.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo05254.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0J8BDN8_BETVU	6.4e-114	73.3	Uncharacterized protein OS=Bet...	[more]
D7SI28_VITVI	2.2e-90	61.0	Putative uncharacterized prote...	[more]
D7SI27_VITVI	6.0e-88	59.0	Putative uncharacterized prote...	[more]
A0A0K9QIV7_SPIOL	2.3e-87	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B9U7_BETVU	6.2e-85	75.2	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo05254.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo05254.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G07950.1	6.1e-76	54.9	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15827	FAMILY NOT NAMED	coord: 2..242 score: 6.1E-59coord: 282..318 score: 6.1