Spo26988.1 (mRNA) | SpinachBase

Overview


Name	Spo26988.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	PRA1 family protein E (AtPRA1.E) (Prenylated Rab acceptor 4)
Location	SpoScf_01707 : 100866 .. 101498 (-)
Sequence length	633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACCAAACCCTTACCCACCTCCACCAACCCAAACTACGGCACAATTCCCACCACCACCACCTCTACCTCCATTTCCTCCATCGACACATTCATCACACGAACCACCAACCAAACCCGAACCCTAATCTCCCACCGCCGTCCATGGCGGGAATTCCTTTCCTTCTCTTCCTTCTCTCCCCCAACCTCTTACTCCACCGCCATGTCCCGCCTCCGCCGCAACCTCAACTACTTCCGCTTCAATTACTCCCTAATCGTCCTCACCATCCTCTTCCTCAGTCTTCTATGGCACCCAATATCCATGATCGTCTACTTAGCGGTTTTCGTCCTCTGGCTATTCCTCTACCTTTCCAGGGACGACCCAATCGTCGTGTTCGGCCGTTCAATTGACGATCGATTAGTTCTTCTTGGTCTATCACTTGTTACTATTTTAGCATTGGTTTTCACTCATGTTGGGCTGAATGTGTTGATTTCGTTAATTGTTGGTGTTTCTGTTGTCGGATTACACGCCGGTTTTCGAATCGTTGACGACTTGTTCTTAGATGAGGAGGATGTTGCTGATGGTGGGTTGTCTGGGTTTATCCCCAGCTCTGAAGGTCAGCCATTGAGGCCTACTTATGCCATAGTTTGA

mRNA sequence

ATGTCGACCAAACCCTTACCCACCTCCACCAACCCAAACTACGGCACAATTCCCACCACCACCACCTCTACCTCCATTTCCTCCATCGACACATTCATCACACGAACCACCAACCAAACCCGAACCCTAATCTCCCACCGCCGTCCATGGCGGGAATTCCTTTCCTTCTCTTCCTTCTCTCCCCCAACCTCTTACTCCACCGCCATGTCCCGCCTCCGCCGCAACCTCAACTACTTCCGCTTCAATTACTCCCTAATCGTCCTCACCATCCTCTTCCTCAGTCTTCTATGGCACCCAATATCCATGATCGTCTACTTAGCGGTTTTCGTCCTCTGGCTATTCCTCTACCTTTCCAGGGACGACCCAATCGTCGTGTTCGGCCGTTCAATTGACGATCGATTAGTTCTTCTTGGTCTATCACTTGTTACTATTTTAGCATTGGTTTTCACTCATGTTGGGCTGAATGTGTTGATTTCGTTAATTGTTGGTGTTTCTGTTGTCGGATTACACGCCGGTTTTCGAATCGTTGACGACTTGTTCTTAGATGAGGAGGATGTTGCTGATGGTGGGTTGTCTGGGTTTATCCCCAGCTCTGAAGGTCAGCCATTGAGGCCTACTTATGCCATAGTTTGA

Coding sequence (CDS)

ATGTCGACCAAACCCTTACCCACCTCCACCAACCCAAACTACGGCACAATTCCCACCACCACCACCTCTACCTCCATTTCCTCCATCGACACATTCATCACACGAACCACCAACCAAACCCGAACCCTAATCTCCCACCGCCGTCCATGGCGGGAATTCCTTTCCTTCTCTTCCTTCTCTCCCCCAACCTCTTACTCCACCGCCATGTCCCGCCTCCGCCGCAACCTCAACTACTTCCGCTTCAATTACTCCCTAATCGTCCTCACCATCCTCTTCCTCAGTCTTCTATGGCACCCAATATCCATGATCGTCTACTTAGCGGTTTTCGTCCTCTGGCTATTCCTCTACCTTTCCAGGGACGACCCAATCGTCGTGTTCGGCCGTTCAATTGACGATCGATTAGTTCTTCTTGGTCTATCACTTGTTACTATTTTAGCATTGGTTTTCACTCATGTTGGGCTGAATGTGTTGATTTCGTTAATTGTTGGTGTTTCTGTTGTCGGATTACACGCCGGTTTTCGAATCGTTGACGACTTGTTCTTAGATGAGGAGGATGTTGCTGATGGTGGGTTGTCTGGGTTTATCCCCAGCTCTGAAGGTCAGCCATTGAGGCCTACTTATGCCATAGTTTGA

Protein sequence

MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEEDVADGGLSGFIPSSEGQPLRPTYAIV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo26988	Spo26988	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo26988.1	Spo26988.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26988.1.CDS.1	Spo26988.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26988.1.exon.1	Spo26988.1.exon.1	exon

Homology

[Close]

BLAST of Spo26988.1 vs. NCBI nr
Match: gi|902220333|gb|KNA18579.1| (hypothetical protein SOVF_069410 [Spinacia oleracea])

HSP 1 Score: 388.3 bits (996), Expect = 8.700e-105
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1


		  
Query: 1   MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFS 60
           MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFS
Sbjct: 1   MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFS 60

Query: 61  PPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD 120
           PPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD
Sbjct: 61  PPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD 120

Query: 121 DPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLF 180
           DPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLF
Sbjct: 121 DPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLF 180

Query: 181 LDEEDVADGGLSGFIPSSEGQPLRPTYAIV 211
           LDEEDVADGGLSGFIPSSEGQPLRPTYAIV
Sbjct: 181 LDEEDVADGGLSGFIPSSEGQPLRPTYAIV 210

[Close]

BLAST of Spo26988.1 vs. NCBI nr
Match: gi|731328070|ref|XP_010674849.1| (PREDICTED: PRA1 family protein E [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 297.4 bits (760), Expect = 2.000e-77
Identity = 166/211 (78.67%), Postives = 183/211 (86.73%), Query Frame = 1


		  
Query: 1   MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFS 60
           MSTKPLPTST PNYGTIPTTTT+T+ SSIDTFIT  TNQTRTLIS+RRPWREFLS SSFS
Sbjct: 1   MSTKPLPTSTTPNYGTIPTTTTTTTTSSIDTFITCATNQTRTLISYRRPWREFLSLSSFS 60

Query: 61  PPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD 120
            PTSY+TAMSR RRNLNYFRFNYSLI+L ILFLSLLWHP SMIV+LAVF+LW+FLYLSRD
Sbjct: 61  LPTSYTTAMSRTRRNLNYFRFNYSLIILIILFLSLLWHPFSMIVFLAVFILWVFLYLSRD 120

Query: 121 DPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLF 180
           DPIVVF RSIDDR VLL LSL+T+LALV T V  NVL+SL +GV VVGLHA  R VDDLF
Sbjct: 121 DPIVVFRRSIDDRYVLLALSLLTVLALVLTSVATNVLVSLAIGVGVVGLHAALRSVDDLF 180

Query: 181 LDEED-VADGGLSGFIPSSEGQPLRPTYAIV 211
           LDE++ VADGG+   + S EGQPLRPT+A V
Sbjct: 181 LDEDEVVADGGV---VSSFEGQPLRPTFARV 208

[Close]

BLAST of Spo26988.1 vs. NCBI nr
Match: gi|802758528|ref|XP_012089279.1| (PREDICTED: PRA1 family protein E [Jatropha curcas])

HSP 1 Score: 214.2 bits (544), Expect = 2.300e-52
Identity = 118/202 (58.42%), Postives = 154/202 (76.24%), Query Frame = 1


		  
Query: 10  TNPNYGTIPTTTTSTS-----ISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTS 69
           ++  YGTIP+TTT+T+      ++  TFI+R T  T+T+++ RRPWRE L+ SS S P S
Sbjct: 5   SSAGYGTIPSTTTTTTQPPTTTATSLTFISRATTATQTIMATRRPWRELLNLSSLSRPYS 64

Query: 70  YSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIV 129
           Y  A+SR++ NLNYFR NY+++ L ILFLSLLWHP+SMIV++ +F+ W FLY SR+ PIV
Sbjct: 65  YGEAISRIKYNLNYFRVNYAMVFLFILFLSLLWHPVSMIVFIIIFIGWFFLYFSREGPIV 124

Query: 130 VFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEE 189
           +F R+ DDR+VLL L LVTI+ALVFTHVGLNVL++L +GV VVG+H  FR  +DLFLDEE
Sbjct: 125 LFNRTFDDRVVLLALGLVTIVALVFTHVGLNVLVALTIGVVVVGIHGAFRNTEDLFLDEE 184

Query: 190 DVADGGLSGFIPSSEGQPLRPT 207
            VA+GGL   + S   QPLRPT
Sbjct: 185 SVAEGGLLSVVGS---QPLRPT 203

[Close]

BLAST of Spo26988.1 vs. NCBI nr
Match: gi|743866186|ref|XP_011032390.1| (PREDICTED: PRA1 family protein E-like [Populus euphratica])

HSP 1 Score: 213.8 bits (543), Expect = 2.900e-52
Identity = 121/203 (59.61%), Postives = 151/203 (74.38%), Query Frame = 1


		  
Query: 14  YGTIP-----TTTTSTSISSID-----TFITRTTNQTRTLISHRRPWREFLSFSSFSPPT 73
           YGTIP     TTTT+T+  S       TFI+R +  T+TLI+ RRPW+E +  SSF  P 
Sbjct: 9   YGTIPSTMSATTTTTTTTQSPQSPTTLTFISRVSTSTQTLIATRRPWQELIKLSSFISPN 68

Query: 74  SYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPI 133
           +Y+ A+SR++ N+NYFR NY++I L ILFLSLLWHPISMIV++ +FV WLFLY  RD P+
Sbjct: 69  NYNEALSRIKFNVNYFRVNYAMICLAILFLSLLWHPISMIVFIVIFVAWLFLYFGRDGPV 128

Query: 134 VVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDE 193
           VVF +S+DDR+VL  L LVTILALVFTHVGLNVLI+LI+GV +VG+HA FR  +DLFLDE
Sbjct: 129 VVFNKSLDDRVVLCVLGLVTILALVFTHVGLNVLIALIIGVVIVGVHAAFRGTEDLFLDE 188

Query: 194 EDVADGGLSGFIPSSEGQPLRPT 207
           E   +GGL   + S   QPLRPT
Sbjct: 189 ESAVEGGLLSVVGS---QPLRPT 208

[Close]

BLAST of Spo26988.1 vs. NCBI nr
Match: gi|566169679|ref|XP_006382806.1| (prenylated rab acceptor family protein [Populus trichocarpa])

HSP 1 Score: 213.0 bits (541), Expect = 5.000e-52
Identity = 118/201 (58.71%), Postives = 151/201 (75.12%), Query Frame = 1


		  
Query: 14  YGTIPTTTTSTSISSID--------TFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSY 73
           YGTIPTT ++T+ ++          TFI+R +  T+TLI+ RRPW+E +  SSF  P +Y
Sbjct: 9   YGTIPTTISATTTTTTKSPQSPTTLTFISRVSTSTQTLIATRRPWQELIKLSSFIRPNNY 68

Query: 74  STAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIVV 133
           + A+SR++ N+NYFR NY++I L ILFLSLLWHPISMIV++ +FV WLFLY  RD P+VV
Sbjct: 69  NDAISRIKFNVNYFRVNYAMIFLAILFLSLLWHPISMIVFIVMFVAWLFLYFGRDGPVVV 128

Query: 134 FGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEED 193
           F +S+DDR+VL  L LVTILALVFTHVGLNVLI+LI+GV +VG+HA FR  +DLFLDEE 
Sbjct: 129 FNKSLDDRVVLCVLGLVTILALVFTHVGLNVLIALIIGVVIVGVHAAFRGTEDLFLDEES 188

Query: 194 VADGGLSGFIPSSEGQPLRPT 207
             +GGL   + S   QPLRPT
Sbjct: 189 AVEGGLLSVVGS---QPLRPT 206

[Close]

BLAST of Spo26988.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHZ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_069410 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 6.100e-105
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1


		  
Query: 1   MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFS 60
           MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFS
Sbjct: 1   MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFS 60

Query: 61  PPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD 120
           PPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD
Sbjct: 61  PPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD 120

Query: 121 DPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLF 180
           DPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLF
Sbjct: 121 DPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLF 180

Query: 181 LDEEDVADGGLSGFIPSSEGQPLRPTYAIV 211
           LDEEDVADGGLSGFIPSSEGQPLRPTYAIV
Sbjct: 181 LDEEDVADGGLSGFIPSSEGQPLRPTYAIV 210

[Close]

BLAST of Spo26988.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJ93_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g082180 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.400e-77
Identity = 166/211 (78.67%), Postives = 183/211 (86.73%), Query Frame = 1


		  
Query: 1   MSTKPLPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFS 60
           MSTKPLPTST PNYGTIPTTTT+T+ SSIDTFIT  TNQTRTLIS+RRPWREFLS SSFS
Sbjct: 1   MSTKPLPTSTTPNYGTIPTTTTTTTTSSIDTFITCATNQTRTLISYRRPWREFLSLSSFS 60

Query: 61  PPTSYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD 120
            PTSY+TAMSR RRNLNYFRFNYSLI+L ILFLSLLWHP SMIV+LAVF+LW+FLYLSRD
Sbjct: 61  LPTSYTTAMSRTRRNLNYFRFNYSLIILIILFLSLLWHPFSMIVFLAVFILWVFLYLSRD 120

Query: 121 DPIVVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLF 180
           DPIVVF RSIDDR VLL LSL+T+LALV T V  NVL+SL +GV VVGLHA  R VDDLF
Sbjct: 121 DPIVVFRRSIDDRYVLLALSLLTVLALVLTSVATNVLVSLAIGVGVVGLHAALRSVDDLF 180

Query: 181 LDEED-VADGGLSGFIPSSEGQPLRPTYAIV 211
           LDE++ VADGG+   + S EGQPLRPT+A V
Sbjct: 181 LDEDEVVADGGV---VSSFEGQPLRPTFARV 208

[Close]

BLAST of Spo26988.1 vs. UniProtKB/TrEMBL
Match: B9MZC5_POPTR (Prenylated rab acceptor family protein OS=Populus trichocarpa GN=POPTR_0005s05640g PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.500e-52
Identity = 118/201 (58.71%), Postives = 151/201 (75.12%), Query Frame = 1


		  
Query: 14  YGTIPTTTTSTSISSID--------TFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSY 73
           YGTIPTT ++T+ ++          TFI+R +  T+TLI+ RRPW+E +  SSF  P +Y
Sbjct: 9   YGTIPTTISATTTTTTKSPQSPTTLTFISRVSTSTQTLIATRRPWQELIKLSSFIRPNNY 68

Query: 74  STAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIVV 133
           + A+SR++ N+NYFR NY++I L ILFLSLLWHPISMIV++ +FV WLFLY  RD P+VV
Sbjct: 69  NDAISRIKFNVNYFRVNYAMIFLAILFLSLLWHPISMIVFIVMFVAWLFLYFGRDGPVVV 128

Query: 134 FGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEED 193
           F +S+DDR+VL  L LVTILALVFTHVGLNVLI+LI+GV +VG+HA FR  +DLFLDEE 
Sbjct: 129 FNKSLDDRVVLCVLGLVTILALVFTHVGLNVLIALIIGVVIVGVHAAFRGTEDLFLDEES 188

Query: 194 VADGGLSGFIPSSEGQPLRPT 207
             +GGL   + S   QPLRPT
Sbjct: 189 AVEGGLLSVVGS---QPLRPT 206

[Close]

BLAST of Spo26988.1 vs. UniProtKB/TrEMBL
Match: B9SZ60_RICCO (Prenylated Rab acceptor protein, putative OS=Ricinus communis GN=RCOM_0484380 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.600e-52
Identity = 116/203 (57.14%), Postives = 152/203 (74.88%), Query Frame = 1


		  
Query: 14  YGTIPTTTTSTSISSID----------TFITRTTNQTRTLISHRRPWREFLSFSSFSPPT 73
           YGTIP TTT+T+ +             TFI+R T+ T+++I+ RRPW+E L+ SSFS P 
Sbjct: 10  YGTIPATTTTTTTTHFSQPLPTTATSLTFISRATSATQSVIATRRPWKELLNPSSFSCPC 69

Query: 74  SYSTAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPI 133
           +YS AMSR++ N+NYFR NY+++VL++LFLSLLWHP+SMIV++ VF+ W FLY SRD PI
Sbjct: 70  NYSEAMSRVKYNVNYFRVNYAMVVLSVLFLSLLWHPVSMIVFIVVFIAWFFLYFSRDGPI 129

Query: 134 VVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDE 193
           V+F R  DDR+VL+ L LVTI+ALV THVGLNVL++L++G  VVG+H  FR  +DLFLDE
Sbjct: 130 VLFNREFDDRVVLVVLGLVTIVALVLTHVGLNVLVALMIGAVVVGIHGAFRNTEDLFLDE 189

Query: 194 EDVADGGLSGFIPSSEGQPLRPT 207
           E  A+GGL   + S   QPLRPT
Sbjct: 190 ESAAEGGLLSVVGS---QPLRPT 209

[Close]

BLAST of Spo26988.1 vs. UniProtKB/TrEMBL
Match: A5AWF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021777 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.700e-51
Identity = 115/196 (58.67%), Postives = 156/196 (79.59%), Query Frame = 1


		  
Query: 14  YGTIPTTTT---STSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMS 73
           YGT+P  +    S+S S   TFI+R T +T+TL++ RRPWREFL +S+ S P +YS AM+
Sbjct: 9   YGTLPNASPAVPSSSTSEQFTFISRATQRTQTLMATRRPWREFLDYSALSRPHNYSDAMA 68

Query: 74  RLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIVVFGRSI 133
           R++RN+NYFR NY++++L ILF+SLLWHP SMIV+L +FV W FLY  RD+P+V+F ++I
Sbjct: 69  RIKRNVNYFRVNYAMVMLFILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTI 128

Query: 134 DDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEEDVADGG 193
           DDR+VL+ L L+T++ALVFT VGLNVL+SLI+GV+VVGLHA FR  +DLFL+EE+VA+GG
Sbjct: 129 DDRVVLVLLGLITVVALVFTDVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLNEEEVAEGG 188

Query: 194 LSGFIPSSEGQPLRPT 207
           L   +  + GQ LRPT
Sbjct: 189 L---LSVAGGQQLRPT 201

[Close]

BLAST of Spo26988.1 vs. ExPASy Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.900e-39
Identity = 97/195 (49.74%), Postives = 133/195 (68.21%), Query Frame = 1


		  
Query: 15  GTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRLRR 74
           G  P++T++T+I  I T   R    T+++I+  RPWRE L  S+ S P  Y  AM+ L+ 
Sbjct: 17  GVGPSSTSNTTI--IGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKH 76

Query: 75  NLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD--DPIVVFGRSIDD 134
           N++YFR NY+L VL I+FL L++HP+SMI ++ VF+ W+ LY SRD  D IV+ G+ +DD
Sbjct: 77  NISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDD 136

Query: 135 RLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEEDVADGGL- 194
           ++VL+ LSLVT+LALV+T VG NVL+SLI+G+ +VG H  FR  DDLFLDEE    GGL 
Sbjct: 137 KIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLV 196

Query: 195 ---SGFIPSSEGQPL 204
              SG  P S   P+
Sbjct: 197 SAGSGNRPPSSYTPI 209

[Close]

BLAST of Spo26988.1 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.600e-32
Identity = 81/170 (47.65%), Postives = 114/170 (67.06%), Query Frame = 1


		  
Query: 31  TFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRLRRNLNYFRFNYSLIVLTI 90
           TF++R ++  R  +S RRPW E +  SSF+ P S + + SR+R+NL YF+ NYS IV  +
Sbjct: 30  TFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLV 89

Query: 91  LFLSLLWHPISMIVYLAVFVLWLFLYL--SRDDPIVVFGRSIDDRLVLLGLSLVTILALV 150
           L  SLL HP S++V L++   W+FLYL  S D P+V+FGRS  DR  LLGL L TI+ + 
Sbjct: 90  LAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVF 149

Query: 151 FTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEEDVADGGLSGFIPSS 199
            T VG  +  +L +G+++V LH  FR+ DDLFLDE++ A+ GL  FI +S
Sbjct: 150 MTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGNS 199

[Close]

BLAST of Spo26988.1 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.400e-32
Identity = 85/188 (45.21%), Postives = 124/188 (65.96%), Query Frame = 1


		  
Query: 13  NYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRL 72
           NYG IPT++  +    ++ +I+R  ++ ++ ++ RRPW+    F S + P  +  A+SR+
Sbjct: 3   NYGAIPTSSHPSPAIDLE-YISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRI 62

Query: 73  RRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIVVFGRSIDD 132
           + NL YFR NY++ VL ILFLSLL+HP S+IV   + V W+FLY  RD+P+VVFG  IDD
Sbjct: 63  KTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDD 122

Query: 133 RLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEEDVADGGLS 192
           R VL+GLS++T++ L+ TH   N+L SL+    +V +HA  R  D+LFLDEE  A    S
Sbjct: 123 RTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEAS 182

Query: 193 GFI--PSS 199
           G +  PSS
Sbjct: 183 GLMSYPSS 189

[Close]

BLAST of Spo26988.1 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.600e-28
Identity = 69/172 (40.12%), Postives = 115/172 (66.86%), Query Frame = 1


		  
Query: 13  NYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRL 72
           NYG IPT++ ++ +  +++ ++R  ++ +  ++ RR WR    F S   P   S A +R+
Sbjct: 3   NYGAIPTSSHASPLVDVES-LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRI 62

Query: 73  RRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIVVFGRSIDD 132
           + NL YFR NY+++VL ++F SL+WHP S+IV+  + V+W+FLY  RD+PI +F   IDD
Sbjct: 63  KTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDD 122

Query: 133 RLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEE 185
           R VL+ LS++T++ L+ T+   N++ +L+ G  +V +H+  R  +DLFLDEE
Sbjct: 123 RTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of Spo26988.1 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.600e-26
Identity = 81/192 (42.19%), Postives = 117/192 (60.94%), Query Frame = 1


		  
Query: 6   LPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSY 65
           LP S +   G+      ST   +  TF++R ++  R  +S RRPW E +  S+ S P S 
Sbjct: 8   LPISDHSGGGSQSQQPVSTP--AFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESL 67

Query: 66  STAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSR--DDPI 125
           + A SR+RRNL YF+ NY  IV  +L LSLL HP S++V L +F  W+FLYL R  D P+
Sbjct: 68  TDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPL 127

Query: 126 VVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDE 185
           VV GR+  DR  L  L ++TI+ +  T VG  +  +L++G  +V LH  FR+ +DLFLD+
Sbjct: 128 VVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDD 187

Query: 186 EDVADGGLSGFI 196
           ++ A+ GL  F+
Sbjct: 188 QEPANTGLLSFL 197

[Close]

BLAST of Spo26988.1 vs. TAIR (Arabidopsis)
Match: AT1G08770.1 (prenylated RAB acceptor 1.E)

HSP 1 Score: 162.5 bits (410), Expect = 2.700e-40
Identity = 97/195 (49.74%), Postives = 133/195 (68.21%), Query Frame = 1


		  
Query: 15  GTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRLRR 74
           G  P++T++T+I  I T   R    T+++I+  RPWRE L  S+ S P  Y  AM+ L+ 
Sbjct: 17  GVGPSSTSNTTI--IGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKH 76

Query: 75  NLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRD--DPIVVFGRSIDD 134
           N++YFR NY+L VL I+FL L++HP+SMI ++ VF+ W+ LY SRD  D IV+ G+ +DD
Sbjct: 77  NISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDD 136

Query: 135 RLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEEDVADGGL- 194
           ++VL+ LSLVT+LALV+T VG NVL+SLI+G+ +VG H  FR  DDLFLDEE    GGL 
Sbjct: 137 KIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLV 196

Query: 195 ---SGFIPSSEGQPL 204
              SG  P S   P+
Sbjct: 197 SAGSGNRPPSSYTPI 209

[Close]

BLAST of Spo26988.1 vs. TAIR (Arabidopsis)
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2)

HSP 1 Score: 140.2 bits (352), Expect = 1.500e-33
Identity = 81/170 (47.65%), Postives = 114/170 (67.06%), Query Frame = 1


		  
Query: 31  TFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRLRRNLNYFRFNYSLIVLTI 90
           TF++R ++  R  +S RRPW E +  SSF+ P S + + SR+R+NL YF+ NYS IV  +
Sbjct: 30  TFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLV 89

Query: 91  LFLSLLWHPISMIVYLAVFVLWLFLYL--SRDDPIVVFGRSIDDRLVLLGLSLVTILALV 150
           L  SLL HP S++V L++   W+FLYL  S D P+V+FGRS  DR  LLGL L TI+ + 
Sbjct: 90  LAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVF 149

Query: 151 FTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEEDVADGGLSGFIPSS 199
            T VG  +  +L +G+++V LH  FR+ DDLFLDE++ A+ GL  FI +S
Sbjct: 150 MTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGNS 199

[Close]

BLAST of Spo26988.1 vs. TAIR (Arabidopsis)
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 139.4 bits (350), Expect = 2.500e-33
Identity = 85/188 (45.21%), Postives = 124/188 (65.96%), Query Frame = 1


		  
Query: 13  NYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRL 72
           NYG IPT++  +    ++ +I+R  ++ ++ ++ RRPW+    F S + P  +  A+SR+
Sbjct: 3   NYGAIPTSSHPSPAIDLE-YISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRI 62

Query: 73  RRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIVVFGRSIDD 132
           + NL YFR NY++ VL ILFLSLL+HP S+IV   + V W+FLY  RD+P+VVFG  IDD
Sbjct: 63  KTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDD 122

Query: 133 RLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEEDVADGGLS 192
           R VL+GLS++T++ L+ TH   N+L SL+    +V +HA  R  D+LFLDEE  A    S
Sbjct: 123 RTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEAS 182

Query: 193 GFI--PSS 199
           G +  PSS
Sbjct: 183 GLMSYPSS 189

[Close]

BLAST of Spo26988.1 vs. TAIR (Arabidopsis)
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 125.6 bits (314), Expect = 3.700e-29
Identity = 69/172 (40.12%), Postives = 115/172 (66.86%), Query Frame = 1


		  
Query: 13  NYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSYSTAMSRL 72
           NYG IPT++ ++ +  +++ ++R  ++ +  ++ RR WR    F S   P   S A +R+
Sbjct: 3   NYGAIPTSSHASPLVDVES-LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRI 62

Query: 73  RRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSRDDPIVVFGRSIDD 132
           + NL YFR NY+++VL ++F SL+WHP S+IV+  + V+W+FLY  RD+PI +F   IDD
Sbjct: 63  KTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDD 122

Query: 133 RLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDEE 185
           R VL+ LS++T++ L+ T+   N++ +L+ G  +V +H+  R  +DLFLDEE
Sbjct: 123 RTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of Spo26988.1 vs. TAIR (Arabidopsis)
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3)

HSP 1 Score: 120.9 bits (302), Expect = 9.200e-28
Identity = 81/192 (42.19%), Postives = 117/192 (60.94%), Query Frame = 1


		  
Query: 6   LPTSTNPNYGTIPTTTTSTSISSIDTFITRTTNQTRTLISHRRPWREFLSFSSFSPPTSY 65
           LP S +   G+      ST   +  TF++R ++  R  +S RRPW E +  S+ S P S 
Sbjct: 8   LPISDHSGGGSQSQQPVSTP--AFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESL 67

Query: 66  STAMSRLRRNLNYFRFNYSLIVLTILFLSLLWHPISMIVYLAVFVLWLFLYLSR--DDPI 125
           + A SR+RRNL YF+ NY  IV  +L LSLL HP S++V L +F  W+FLYL R  D P+
Sbjct: 68  TDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPL 127

Query: 126 VVFGRSIDDRLVLLGLSLVTILALVFTHVGLNVLISLIVGVSVVGLHAGFRIVDDLFLDE 185
           VV GR+  DR  L  L ++TI+ +  T VG  +  +L++G  +V LH  FR+ +DLFLD+
Sbjct: 128 VVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDD 187

Query: 186 EDVADGGLSGFI 196
           ++ A+ GL  F+
Sbjct: 188 QEPANTGLLSFL 197

The following BLAST results are available for this feature:

BLAST of Spo26988.1 vs. NCBI nr
BLAST of Spo26988.1 vs. UniProtKB/TrEMBL
BLAST of Spo26988.1 vs. ExPASy Swiss-Prot
BLAST of Spo26988.1 vs. TAIR (Arabidopsis)

BLAST of Spo26988.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902220333\|gb\|KNA18579.1\|	8.7e-105	100.	hypothetical protein SOVF_0694...	[more]
gi\|731328070\|ref\|XP_010674849.1\|	2.0e-77	78.6	PREDICTED: PRA1 family protein...	[more]
gi\|802758528\|ref\|XP_012089279.1\|	2.3e-52	58.4	PREDICTED: PRA1 family protein...	[more]
gi\|743866186\|ref\|XP_011032390.1\|	2.9e-52	59.6	PREDICTED: PRA1 family protein...	[more]
gi\|566169679\|ref\|XP_006382806.1\|	5.0e-52	58.7	prenylated rab acceptor family...	[more]

BLAST of Spo26988.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RHZ3_SPIOL	6.1e-105	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CJ93_BETVU	1.4e-77	78.6	Uncharacterized protein OS=Bet...	[more]
B9MZC5_POPTR	3.5e-52	58.7	Prenylated rab acceptor family...	[more]
B9SZ60_RICCO	4.6e-52	57.1	Prenylated Rab acceptor protei...	[more]
A5AWF7_VITVI	1.7e-51	58.6	Putative uncharacterized prote...	[more]

BLAST of Spo26988.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PRA1E_ARATH	4.9e-39	49.7	PRA1 family protein E OS=Arabi...	[more]
PR1B2_ARATH	2.6e-32	47.6	PRA1 family protein B2 OS=Arab...	[more]
PR1F2_ARATH	4.4e-32	45.2	PRA1 family protein F2 OS=Arab...	[more]
PR1F3_ARATH	6.6e-28	40.1	PRA1 family protein F3 OS=Arab...	[more]
PR1B3_ARATH	1.6e-26	42.1	PRA1 family protein B3 OS=Arab...	[more]

BLAST of Spo26988.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G08770.1	2.7e-40	49.7	prenylated RAB acceptor 1.E	[more]
AT2G40380.1	1.5e-33	47.6	prenylated RAB acceptor 1.B2	[more]
AT1G55190.1	2.5e-33	45.2	PRA1 (Prenylated rab acceptor)...	[more]
AT3G13720.1	3.7e-29	40.1	PRA1 (Prenylated rab acceptor)...	[more]
AT5G05380.1	9.2e-28	42.1	prenylated RAB acceptor 1.B3	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 44..184 score: 2.1
None	No IPR available	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 5..210 score: 1.8
None	No IPR available	PANTHER	PTHR19317:SF3	PRA1 FAMILY PROTEIN E	coord: 5..210 score: 1.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane