Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACACGAAACAAAAACCAAGTTGTGAATAGTGGCCCACAATGAAATCCTATATGCCACATGGCACTATATCAACCAGTGCCTGAATTTGCTTTTTAAATTGGAACCATTCAAATTTAATCGGTAAAATATGCTTCACTATTCTCAAATCAACAACATTGTACACTTCTCAATTCCCACTCTCTCTCTCTTCTTTGTTGTAAGAATTGAGAGAGATGGCAATGGAGATGATGGCTCTCAGAGTTTCTGCCTCAGCTAAACCTACCATTTCTCCTTCTTCTTCATCTTCTTCCTCTCAAAAATCCCAGCTTTTAAAACAAAGTTCAAAACTTCAGCTAAAACAAGCTCAAAATCTCTTCTTTCCCACCTCAACTTCTCTCTCTCTTTTGACTTTGTTCACCACTCCCTTTGACGCTAAAGCTGTTTCCCTCCCCAAAGAGCAATTAGTCACTTCTCTCACTCAAGTAAGCAACTTCACATTATCTTAACCTTCCCAATCTTTTTATTTTTAGTGGAATTAATTGTGGAATTTGAATTATTTGATTGACCCTTTGTTGATTTTTGAATTTGATTGATACCCACTTGCTATTTTTTTTATTTTGATAGGAAATTGTTACACCACAGTTAGAAACTTTGCAGATAATTTGTGGAATTTGATTAATATTGACTTCATGTATGTTGGAAATTTGATTGACCCATTTGCCGATTTGTGGATTTGATTGATGCCCACTAGTTCATTGTGGAAATTGAGTGATATCTACTTACTAATTTTGGATTTTGATGGGTGCCTATCTCATGAAAATTTTGAATTTCATCCATACCCACTTGATAAAATGTGTAACCTTGATTGACTCAATTGGTGATTTTTGAAATTGAGTGATACCCACTTGCTAATTTTGAAAATTGATGGGTACCATCTTTAAAAAAATTGTGTGGAATTTGGTGTATTTTTCAGGTGGAGCAAACAATTGATCAAGTTCAGGAAGTGGGTTCGAGTGTTTTCGATTCTGCACAAAAGGTTTTCCAGGTTGTGGCCGAGGCTTTGAAGCCTGGCATTGATGCTGCCACGCCGATTGTGCAGCAGGCTGGACAAGAGGCATTTAAAGCCGCTTCTCCATTGATTTCTGAGGCTTCCAAGAAAGCTCAGGAAGCAATGCAAAACTCTGGGATTAGTTCTGAATCAATGACCACTGCCACTCAGGTTTCATACCTTCTTCTGCTGCGTTAGGTGTATCTAATGGATGATACTTTCAGCTCCAAACTTTGATTCTTTTACACATTTTTTCTTGTACTTAACCCAATTGGAATAGTCTTAGTGAAATAGTCTATAATGCCTCGAGAGATAAATAACAGACACTTGCAAACATCAAAACAAGGTTTTGGATGAAAGTNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTATGTAATAAATTATGATGAAATGCTTCGAATGAAGATGGACTAGTACGGTGAACTTTTTGATGAACTAGATGACTGCATCATGGGGTTTAAGTGCATTCTAGCATTTTTCTATTTAGTCGTGGAAAGTGTTGGTAAACGAGGAGTGTGCTTTTTACGTATAGTAGGGGCAATGGGAGAATCGCCAAGTCCCAAGGGGGAGTTAGGGAATCAAGTTAGAAAGGAGCGACAAAACAACGTATCGAGAGAGAATTAGATTTGGCTAGACGATGTGCGGTTAAGGGAATCAGATGTATCCTTTCCTTTTCCCTTCCATGAAACTCCTCAACCAAACACGCCCTATAGTTAGATACTTAGATTTCTGAGAGCATGCCAGTGAAGACAGCTGCATTTCTTTGTTATTGATCTTGATGCCAGTTCAATAGATAAAGTAGTCTGTAAATTTGAGTCTGAAATTGACATCAGAAACTGCTTATTGTCTGTTGATCTTGCACCTTTTACTAAGGTAGAGTTATTCAGGTAATCTCGAACTTGTGAACGGTTTGGTGCTTATTGTGAACGGTTAGGCAATCCCTAAACCCTAAGGTAGAGTTAATGGCTAAAGACAAATCCTTTAGATGTGGAGAGTCACAAGTTACAACTTACAAATATTTCTCATCATTTGTAACCTTTGGTCTACTAAATATTGGTAATACTGCCTATAACAGGACATTTTTTGGGGTTTAATCATCAATTCTATCAATATCATCTAGACAAATTCTATGATATAGTATAGTACTCCATAAAATATGCTTTGATCCTTTGGCTGTTTGAGTTGGATCTGATCTAAAATGAGAAGTTGGCATTTGCTTTGACAGACTGTAACAAGTGCTGCAGAACAGACAACAAAAGCGTTTGAAGATGCTAAGCCCTTAGCATCGTCGACATTCGAAACCATCTCAAACTCAGACCCCGCTCTATTAGCAGAAGGTGCTGCTGCGTTGTTTCTTGCATACCTCCTCTTTCCTCGAGTCTGGTCAATTGTCTCCTTTAACCTTCGCGGATACAAAGGTAAATGATGTTTCTAAGCAAGATCTCTTAGTATACTTTTACAAAGCAGAAAAGTACTACTTTGGTAGAGTACTAGACTACTAGTTGATATTTATGTTCTAACTCCTGTATTCCTTTTTTTGTGTGGTGAAGGCGACATATCTTATCAAATTTGACATTTTTACATTGTAACTAGTGAGTCATTTCAATGTTCATGGGGCGATAATTGATTGACACCCCAAAGAAGAAAAAAGAAACAGTCAAAACAGCAAGTACTAAATAACATTAGAACTGGAGCTAGGCTAAAAACTTAAATTTTCTTTTCCAACTATCTGGTATCCAGAATCGGTTTCTCACTGCTTATTTATACATTGTCACAAACTCACCCTTCAGGTGGACTTACTCCTGCTCAAACCTTGGAAATGTTGTGCACTCAGAACTATTACTTGATTGACATGAGATCAGAGAAGGACAAGAACAAGGCTGGTATTCCCCAGCTCCCCTCAAGTGCCAAAAGTCGGATGATTGCAATTCCGTAAGTATCATTATCGTTGTCATCAAAAAAGAAAAAGAGAGCGAGAGATATTGGTCAGTTTGTTTGCATGGATCGGGGCCAGTTTAATTATAGTTTGGTGTTTGATATATCTCTCAAAAATGCTTCCAGCACAAGAGTGTATGACTATATAAATAATGGGATATTCCTCCTATGTTTTAGAAATCCCGTATGTATTACTAATTAGATAATAACTCCCAGAGCCAATTAAGGATGACCAACGCTGCTAGTAATGGTTTCTTTTTACAGCAATGGTTTCTTTTTACAGCAATGGTAGCAATTGGGTAAATGCATAGAAATTTATGTACACAGTTTTGTAGGGCAAATGATTTCTCTTGTCTGGGTTGTGTTCACGCTTCTGACTGAATGTTGAAGCAAAATCCAGTAACACTGGACAGTTTTATTTTCATTGCTGACTTTTTTGTTTGCTGAAGTTGAGTAGTGATGTTTGGCTTAGTTAAAATTCTATTGTGTTAGGAAGTTGTGTAATTCTGACGTATCCATTTGACTTGTAGGCTAGAAGAATTACCGAGCAAGGTAAGAAACCTTGTTAGGAACTCAAAGAAAGTAGAAGCAGAAATAGTTGCATTAAAGGTATCTTATCTCAAGAAACTATCAAAGAGCACCAACATCGTGATCATGGACTCGTAAGCCTTCACAGCTCATTAGTATAACTGCAGCAGCCTTTGTCGCGTTTCATTAATGGCATTTTTGAACTGATGGGTTTTCTGTTATTATGGAAAACAGGTACTCAGACTCAGCAAAAACAGTTGCAAAGAGTTTGACAGGTTTGGGATTCAAAAACAGTTGGATCCTGACAGATGGTTTCTCTGGAGGCAAGGGTTGGTTGCAAAGCCGTTTGGGTACTGAGTCATACAATCTATCTTTTGGTGAGATATTTTCGCCATCACGTATTATTTCCGGTGGTACAGGGCGTTTTGGTACAACAAGCTCTACTGTTCAAATTGGTAGAAAAATGCTTCCAGGCTCAAATTAACTCTATCTGTGTAGTATATGTAATGTAATGTAATGCAGATGGTTGTAGTTTGTGTACTTCGATTTTGAGCCCTTTGTAAAAAGTTAAAATTATTGAAAAATGCATAGCCGATTTTGTTATATGTTAACTTCATTTTTTTCGTATTGATTGTGATGTTTGTGCCACTGATCAGTGATCACAATATGTATGGGACATTTGATGTTTGTAGAATTCGCGTCACGTTCTACTGGAGCCGAGGTCCTGAGTCAGGGTTATACTATACGTCTATACTATACTCACTTCTAAAAGTTCCAACTCTCTTGATGTACCAGTCTGTCTTTTTTTTTTTACGCATAGCACACCCAGTTCACCGGAGCTTAGCTCCGATTACATCTGGATCTGACCCGGGTCGCACACCTTGCTTATGGTGGGTGAGTCTCCCAACAAGAATTTCTGCATACGGCGAGGCTCGAATCCGAGACCTCCCTTAAACGGCATCAAGCTGCTTACCACTTGAGTCAACTCTATGTTGGTGTACCAGTCTGTCAATCAAGCATTTTTGTAATCTGATCAAAGGGAGTACACAAAAATTTGGGTGGTTTCCAACCTGTTATCATAATTAAACTGTATTTATCACAAGC TACACGAAACAAAAACCAAGTTGTGAATAGTGGCCCACAATGAAATCCTATATGCCACATGGCACTATATCAACCAGTGCCTGAATTTGCTTTTTAAATTGGAACCATTCAAATTTAATCGGTAAAATATGCTTCACTATTCTCAAATCAACAACATTGTACACTTCTCAATTCCCACTCTCTCTCTCTTCTTTGTTGTAAGAATTGAGAGAGATGGCAATGGAGATGATGGCTCTCAGAGTTTCTGCCTCAGCTAAACCTACCATTTCTCCTTCTTCTTCATCTTCTTCCTCTCAAAAATCCCAGCTTTTAAAACAAAGTTCAAAACTTCAGCTAAAACAAGCTCAAAATCTCTTCTTTCCCACCTCAACTTCTCTCTCTCTTTTGACTTTGTTCACCACTCCCTTTGACGCTAAAGCTGTTTCCCTCCCCAAAGAGCAATTAGTCACTTCTCTCACTCAAGTGGAGCAAACAATTGATCAAGTTCAGGAAGTGGGTTCGAGTGTTTTCGATTCTGCACAAAAGGTTTTCCAGGTTGTGGCCGAGGCTTTGAAGCCTGGCATTGATGCTGCCACGCCGATTGTGCAGCAGGCTGGACAAGAGGCATTTAAAGCCGCTTCTCCATTGATTTCTGAGGCTTCCAAGAAAGCTCAGGAAGCAATGCAAAACTCTGGGATTAGTTCTGAATCAATGACCACTGCCACTCAGACTGTAACAAGTGCTGCAGAACAGACAACAAAAGCGTTTGAAGATGCTAAGCCCTTAGCATCGTCGACATTCGAAACCATCTCAAACTCAGACCCCGCTCTATTAGCAGAAGGTGCTGCTGCGTTGTTTCTTGCATACCTCCTCTTTCCTCGAGTCTGGTCAATTGTCTCCTTTAACCTTCGCGGATACAAAGGTGGACTTACTCCTGCTCAAACCTTGGAAATGTTGTGCACTCAGAACTATTACTTGATTGACATGAGATCAGAGAAGGACAAGAACAAGGCTGGTATTCCCCAGCTCCCCTCAAGTGCCAAAAGTCGGATGATTGCAATTCCGCTAGAAGAATTACCGAGCAAGGTAAGAAACCTTGTTAGGAACTCAAAGAAAGTAGAAGCAGAAATAGTTGCATTAAAGGTATCTTATCTCAAGAAACTATCAAAGAGCACCAACATCGTGATCATGGACTCGTACTCAGACTCAGCAAAAACAGTTGCAAAGAGTTTGACAGGTTTGGGATTCAAAAACAGTTGGATCCTGACAGATGGTTTCTCTGGAGGCAAGGGTTGGTTGCAAAGCCGTTTGGGTACTGAGTCATACAATCTATCTTTTGGTGAGATATTTTCGCCATCACGTATTATTTCCGGTGGTACAGGGCGTTTTGGTACAACAAGCTCTACTGTTCAAATTGGTAGAAAAATGCTTCCAGGCTCAAATTAACTCTATCTGTGTAGTATATGTAATGTAATGTAATGCAGATGGTTGTAGTTTGTGTACTTCGATTTTGAGCCCTTTGTAAAAAGTTAAAATTATTGAAAAATGCATAGCCGATTTTGTTATATGTTAACTTCATTTTTTTCGTATTGATTGTGATGTTTGTGCCACTGATCAGTGATCACAATATGTATGGGACATTTGATGTTTGTAGAATTCGCGTCACGTTCTACTGGAGCCGAGGTCCTGAGTCAGGGTTATACTATACGTCTATACTATACTCACTTCTAAAAGTTCCAACTCTCTTGATGTACCAGTCTGTCTTTTTTTTTTTACGCATAGCACACCCAGTTCACCGGAGCTTAGCTCCGATTACATCTGGATCTGACCCGGGTCGCACACCTTGCTTATGGTGGGTGAGTCTCCCAACAAGAATTTCTGCATACGGCGAGGCTCGAATCCGAGACCTCCCTTAAACGGCATCAAGCTGCTTACCACTTGAGTCAACTCTATGTTGGTGTACCAGTCTGTCAATCAAGCATTTTTGTAATCTGATCAAAGGGAGTACACAAAAATTTGGGTGGTTTCCAACCTGTTATCATAATTAAACTGTATTTATCACAAGC ATGGCAATGGAGATGATGGCTCTCAGAGTTTCTGCCTCAGCTAAACCTACCATTTCTCCTTCTTCTTCATCTTCTTCCTCTCAAAAATCCCAGCTTTTAAAACAAAGTTCAAAACTTCAGCTAAAACAAGCTCAAAATCTCTTCTTTCCCACCTCAACTTCTCTCTCTCTTTTGACTTTGTTCACCACTCCCTTTGACGCTAAAGCTGTTTCCCTCCCCAAAGAGCAATTAGTCACTTCTCTCACTCAAGTGGAGCAAACAATTGATCAAGTTCAGGAAGTGGGTTCGAGTGTTTTCGATTCTGCACAAAAGGTTTTCCAGGTTGTGGCCGAGGCTTTGAAGCCTGGCATTGATGCTGCCACGCCGATTGTGCAGCAGGCTGGACAAGAGGCATTTAAAGCCGCTTCTCCATTGATTTCTGAGGCTTCCAAGAAAGCTCAGGAAGCAATGCAAAACTCTGGGATTAGTTCTGAATCAATGACCACTGCCACTCAGACTGTAACAAGTGCTGCAGAACAGACAACAAAAGCGTTTGAAGATGCTAAGCCCTTAGCATCGTCGACATTCGAAACCATCTCAAACTCAGACCCCGCTCTATTAGCAGAAGGTGCTGCTGCGTTGTTTCTTGCATACCTCCTCTTTCCTCGAGTCTGGTCAATTGTCTCCTTTAACCTTCGCGGATACAAAGGTGGACTTACTCCTGCTCAAACCTTGGAAATGTTGTGCACTCAGAACTATTACTTGATTGACATGAGATCAGAGAAGGACAAGAACAAGGCTGGTATTCCCCAGCTCCCCTCAAGTGCCAAAAGTCGGATGATTGCAATTCCGCTAGAAGAATTACCGAGCAAGGTAAGAAACCTTGTTAGGAACTCAAAGAAAGTAGAAGCAGAAATAGTTGCATTAAAGGTATCTTATCTCAAGAAACTATCAAAGAGCACCAACATCGTGATCATGGACTCGTACTCAGACTCAGCAAAAACAGTTGCAAAGAGTTTGACAGGTTTGGGATTCAAAAACAGTTGGATCCTGACAGATGGTTTCTCTGGAGGCAAGGGTTGGTTGCAAAGCCGTTTGGGTACTGAGTCATACAATCTATCTTTTGGTGAGATATTTTCGCCATCACGTATTATTTCCGGTGGTACAGGGCGTTTTGGTACAACAAGCTCTACTGTTCAAATTGGTAGAAAAATGCTTCCAGGCTCAAATTAA MAMEMMALRVSASAKPTISPSSSSSSSQKSQLLKQSSKLQLKQAQNLFFPTSTSLSLLTLFTTPFDAKAVSLPKEQLVTSLTQVEQTIDQVQEVGSSVFDSAQKVFQVVAEALKPGIDAATPIVQQAGQEAFKAASPLISEASKKAQEAMQNSGISSESMTTATQTVTSAAEQTTKAFEDAKPLASSTFETISNSDPALLAEGAAALFLAYLLFPRVWSIVSFNLRGYKGGLTPAQTLEMLCTQNYYLIDMRSEKDKNKAGIPQLPSSAKSRMIAIPLEELPSKVRNLVRNSKKVEAEIVALKVSYLKKLSKSTNIVIMDSYSDSAKTVAKSLTGLGFKNSWILTDGFSGGKGWLQSRLGTESYNLSFGEIFSPSRIISGGTGRFGTTSSTVQIGRKMLPGSN Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo15369.1 vs. NCBI nr
Match: gi|902202162|gb|KNA14182.1| (hypothetical protein SOVF_109900 [Spinacia oleracea]) HSP 1 Score: 728.8 bits (1880), Expect = 5.200e-207 Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 1
BLAST of Spo15369.1 vs. NCBI nr
Match: gi|731367751|ref|XP_010695780.1| (PREDICTED: calcium sensing receptor, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 575.5 bits (1482), Expect = 7.400e-161 Identity = 324/400 (81.00%), Postives = 356/400 (89.00%), Query Frame = 1
BLAST of Spo15369.1 vs. NCBI nr
Match: gi|1012006435|ref|XP_015944026.1| (PREDICTED: calcium sensing receptor, chloroplastic [Arachis duranensis]) HSP 1 Score: 460.7 bits (1184), Expect = 2.700e-126 Identity = 252/405 (62.22%), Postives = 323/405 (79.75%), Query Frame = 1
BLAST of Spo15369.1 vs. NCBI nr
Match: gi|1021471835|ref|XP_016193993.1| (PREDICTED: calcium sensing receptor, chloroplastic [Arachis ipaensis]) HSP 1 Score: 459.9 bits (1182), Expect = 4.500e-126 Identity = 253/404 (62.62%), Postives = 324/404 (80.20%), Query Frame = 1
BLAST of Spo15369.1 vs. NCBI nr
Match: gi|1009132090|ref|XP_015883197.1| (PREDICTED: calcium sensing receptor, chloroplastic [Ziziphus jujuba]) HSP 1 Score: 458.4 bits (1178), Expect = 1.300e-125 Identity = 254/402 (63.18%), Postives = 325/402 (80.85%), Query Frame = 1
BLAST of Spo15369.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5V6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_109900 PE=4 SV=1) HSP 1 Score: 728.8 bits (1880), Expect = 3.600e-207 Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 1
BLAST of Spo15369.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBV5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g127120 PE=4 SV=1) HSP 1 Score: 575.5 bits (1482), Expect = 5.100e-161 Identity = 324/400 (81.00%), Postives = 356/400 (89.00%), Query Frame = 1
BLAST of Spo15369.1 vs. UniProtKB/TrEMBL
Match: E4MVR8_EUTHA (mRNA, clone: RTFL01-06-I08 OS=Eutrema halophilum PE=2 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 4.600e-125 Identity = 258/405 (63.70%), Postives = 320/405 (79.01%), Query Frame = 1
BLAST of Spo15369.1 vs. UniProtKB/TrEMBL
Match: V4KWV5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004373mg PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 4.600e-125 Identity = 258/405 (63.70%), Postives = 320/405 (79.01%), Query Frame = 1
BLAST of Spo15369.1 vs. UniProtKB/TrEMBL
Match: G7JT26_MEDTR (Extracellular calcium sensing receptor OS=Medicago truncatula GN=MTR_4g112530 PE=4 SV=2) HSP 1 Score: 451.1 bits (1159), Expect = 1.500e-123 Identity = 258/401 (64.34%), Postives = 318/401 (79.30%), Query Frame = 1
BLAST of Spo15369.1 vs. ExPASy Swiss-Prot
Match: CAS_ARATH (Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 3.000e-122 Identity = 249/405 (61.48%), Postives = 319/405 (78.77%), Query Frame = 1
BLAST of Spo15369.1 vs. ExPASy Swiss-Prot
Match: CAS_MAIZE (Calcium sensing receptor, chloroplastic OS=Zea mays PE=1 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.800e-82 Identity = 191/406 (47.04%), Postives = 264/406 (65.02%), Query Frame = 1
BLAST of Spo15369.1 vs. TAIR (Arabidopsis)
Match: AT5G23060.1 (calcium sensing receptor) HSP 1 Score: 439.9 bits (1130), Expect = 1.700e-123 Identity = 249/405 (61.48%), Postives = 319/405 (78.77%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15369.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15369.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15369.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo15369.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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