Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGGGTCAGATCTTCGCGTGTTTTGATCAATTGAATGCTATTTTCGCTACTTTTGTTGATTGTTGATGGGATTCTGTATGGCCATCTCCCATCGAAGGTGTGTTTTGTTTTGTCATTATTTATCCAGGACTATGGATTTCGTTTCATGTGATGTATAGGTGAGGCCTCATTCTTATGTATATTCTGCAGATCTGCTTTTCCTCCTTTGCTTCTTCCCACTCGCTCGAACCAAATCCAACACCAGGTATCATATATTTCTTCATCTTTATATCATCAAGTGATTTCTAAGTTGTTAATCTTATTTTATTTAAGTATTAAATTAGAGTAGTGTGTGTTGCAGAGATGAAGATTATTGCCGCTTGCTTGTTGGTTGCTTTGGGCGGTAATTTATTTCCATGATTTGTGTATTGAAAGTGTTAATTCCTTTCTCGTTGTTTATGGGTTTCGTTTTAATTTTCTCATTTTAGTTTTCTTTTATTAGTCGAGTATTAGTGTTAATTTGTCAAATGTTAACTATCTATGCTACACATCTATGAAGCATGGGTACGCCTGGGAGGTGTCGTTTCCCGTACCGGGTACGGGTACGGTACGGGTACGCCCAGGATACGTCCCCATGCCGAATCCAAAAGGTGGGTACGCGGGTTGATTTTGGGTACGGCTAAGGTGAAGTCGGGGACGGAGTTGGGTACGTTTTTTAGGAGGAAGGCGCGTACCCCAGTGTTACCCGGTTTGTGGTTCGTGTTAACCCGAATTGAAACCCTAGATCTACCATTGAAGCACTTCGATGGAGTTGTGAACAGGGTATATGTTGATCAATTTCTTGTCTTCTTCGCCGGAATTGCCATTGTTGATTCATATCTCTGAGTTTTTGCGGTTGTGTCTGAATTTTTTTTTTTTTGCGTGAAAACGGAGGAGGGAGAAAGAAAGAGGATGGTGTTTTTATGATTTTCTGTGCGTGAAAATGGAGGAGGAAGAAAGAAAGAGGATGGTGTGTTTATGATCTTCTGTGCGTGAAAATGGAGGAGGGAGAAAGGGGAAGGTGAAGAGCTGAAAATTACAGAGTATTTTTTAAACAGCATCTTTTAAACAGCATCTTACAGCTGTATTCTACTTCCTAAAGGCTGATTTTTTACTTTTTACTTTTTCTTATCATTAAATTGTAATTATTATTTTACCCCTTAATCTTTATTATATTATTTTAATTTTTGGAAGGAATCTTTGCTATTTTCATTATTTAATAACTTTTTTTTTTCTATATTACCGACTTACCGAGTATTCTATCTACTTAATTTTTTTCCATTTTTTTTTCTAGTATTTTTAATTTAATTTAATTTAATTTGTTTTTGCCGAATCCATGCCGTACCCGTTTTTTGCAATTTTGATTTTGCCGTTTTCAGTCCCCGTACCCGTATCCGTACCCGTCTCCGTACCCGTTTCCGTGCAACCTAGCTACACATATACTTCCTATAACTCTCATCAACATCTGACTGTAGTAGGAATGCTTAAAAGTAGATAGAAATTTTGACAGATAAACTATGGATAGCTGGGTTTTCTTTGCAGAATTTCATTTTCGAGTTTTATTTATTTATTCCCGAGTCTTGTTAGTTCTGATTTCTTCCTGTATTCAATTTGTGTTTTTAATATGCTTGATTTGGTGGATGTGGATGATGTATTGGTTTTCGAGTTTTTTTTTGTTTTGAATCCTGAGTTTTCTCTGGTTTCTTCAGCTCTGCCACATCCTCTCTTTTTTGCATAGGTTCTTACTAATTTTTTCCTAACTGACCCTTCTGCAGTGTCACCCTCTGCATTGCCATCTTTTGTGTGACAATGCAGACGTCCCCTTCTTCTTACAACAGATCCATCTAGCAGTCCTGATCACCGTGGAAATATTGCTCAGTTCATCATGGCATCAATGACCACACTTAGTAAGCCATTTATTTTAAAAGTATTCCTTTAAGTCTGAAACTATTCCTTTTGAGTCTGATATTGATGTACAAAATAAAGGGCTTATCTGTTTTAACGGACTATTTTCCTACATGATATACATACAGTATCTAGCTTCTGGCTAATGAGTAAGAGACATCCTTCAGTTAACAGTGCAAGCTTATTTCCTCTGTTATTGACTTATTTTGTTATGGCTAATGAGTAAGAGACATCCTTCAGTTTAAATTTACAAATATCTTTCCTGACATCTTCGTCTGAAAATTTCAACAGGCTGTCATGGTCCACGAGTTTGGTCATCTGAAATGCGACCATTGAGTGGCTGACATATGCAAATATCCTTGCTCTTGGGGCACATAGGAAGTTCAGTCTCAGGCGTTTGGGAAGTAAGCTTGCACTGTTAACATTGTGAAGCAGTAGAAATCCAGTTATATTAAGAAAAGCTTTCTTTCAATCCAAAGAATCATAGATACAACTTACTGGATTTACAGTTTTCTTCCGTGCTCTCGAGCTTTCTGCTGAAAAATAACAGCATCTGTTGGTTCTGTTCTAAGCCCCATCCTTGAATTAACGATTCCAGCCTCAAAACCTTAGTTGTTATAACTTATATGGTCCTTTTTTATCCAGCTTTTCATTTTCTCGTCACAGCTTTTGAGTGCTTCAGTGAGGATGTAGATTCAACCTGGTCTCTTGAGAGACAACACAAAGGTATTCTTATGTAGTGGTTGGAGAGAGGAAGCAATGTGTTTTTTTTTTAATAAACAAGGCAATTGCATAGATAGGTTAAGTGAATTACCGGATGAATTGAGCTGCAAGTTCGTATCTTTTAAGTTAATTTTTGTGATTCTTTACAATTGTGGTGGTGACTCACTGAATCATGGTTATTTGCTTTTAGGGGGTTTGCTGAATTTGATTTATTTCAAAGTAATTAAGCTTATTTATGTTAGAAGAAATGAGAGTTTTGAGTTGGTTTATGTTAAATTTGTGATTTGTAAAGCTATAAGAGATGAATTCTTTAGGGATATGAGTTGCTGAAAATGGAATGTATCTGAGCTCACCCAAAAGATAGTTTTTCTTTGAGTGAACGTAGTTGTAAGGATTTATGCTTATATAGTTAAAATATCGAATTATGGGGTTATGATTGTATTTGTTACATGAGAAAATGGCTGTGAGTAATAAAATGTACATCTTTCGGTTTTCATCATTTTCTAAGCGTTGTAGCCGTTTTGGAATTGGGGGGGGGGGTAGAGTTACTGTTGGAGAAATGTTACTAAGGACTAGAGTGTGCTTACCCATGAGTTTTCGAAAAAAAATTGGCGGTTCTTTGATGACTTCCATTAATGGTGTCAAGAGTCTTTGAGAATTGAGATACCTCAATTTAGTTTGAGCTCGGGCCGGAGCCTTGTTGCACTGAATTGTTGTGGTTTTTTTTATATGGGTTGTATTGTATTGAAGCTGCATCAGTTTCTTTTAAAGATTTAAAACAGCTTATGGGATGCGGGGTTATGTAATTATGTTGGTCCTTTTGGAGGCTGTTTGAACTATGACTCTTAGTGTTATGGGTTGGTATCTTCACCTCCTTCTTATGACCTGATGCATAACATATAGGTCTCAAAAGCCATCCTTAAAAGCAAGAGTATCCATAATAATGTCTAATAATTGGAAAAATAATCGATTAGCGTTTTGCATGAAGATTCAAGTTCCTTGGTGTAGATTCAAAGAAACTAGGAAGGCACAAAAGGAAGTTAAATTAAGACATAATGCAGAATATATTTAGAAAAATAGCTGCAGTCAAAACCTTAAGGCCGGATTATTTTAAAACTGAAAAAAGGCCTAATTAACCTAAACACCGGTTGTAGCAGCAAATTACAAACTAATGTGAATCTCAAGTACTAATAAATTGTCTGGTGTTATCAAAATTTCGTCAACTAGATAATTCCAGCACAATCATCTACTTCACTCGATCTTTTTCATAGCAGTAATTAATTGTGCTGTTAATTTAATACGTTCATGGGCGTTTATTGAACTAAGAGCAACTTGTGTTGCGATTATAATAATATTGTATTCTGGAATACATTAAGATGTGATATGATCCTCTTTTTAAGAAAGAATAAAACAAATAAGATGTAGCTCCTTTAAATTAGAAATCTTGGATTTTCTCTTAGTTCTGACATCACTACCTTGTTTTGATGTTGCAGCATTCTTGTTGAAGTTTGTGGACCATTTTCTGAGGACTTGTGGAAGGGGATCATAATCAACAAGTTAACATTTTATGGCGTGAAGCTATGTTCACGATGCAAGGTAAATAACTACGTTACGGAGCATAATGCTAAAGGCTAATAAAAGGATTTAGGAAAATTTGGTAATATTAATCCAACCTTTTGCCGATTTTCTTTTATTAAGCCCACCTACGACATATTTTTTAATAATCCCACCTTTACCACCCAACGTCTTTTATTGGGCCCAACACGTCATAAACCTATTGTCGGCGGTAATATATCCCTACGTGGAAGTACTCTCTCTAGATGTATTCAGTCATCATCATCAATTCATCACCATCTCGATGATTTTTTCACCAGTTATCGGTCACTTAAGCCCAATAAAAGTTGTTGGGTAGTAAAGGTGGGATTATTAAAAAATATGTCGTAGGTGGGATTAATAAAAGAAAACCGGCCAAAGGTTGGATTAATATTACCAAATTGATTTCAAAACACCTTGTTTTTTAAGTTCAATAGATATGTAATGTAGATATAAAAATGAAAAATAAAGATGCATATTTGAGAGTTTAATATCAAAGGCGAATGTGCTAGAATAGTAAAAACGGGAGAGGAGAGAAAGAAGTAACACAGGTCACAGGGTGTTGAATGAGGAGAGAAAGAAGTAACTAACATAGGGAGCTGAGTGAGGAGAAAAAATTAGAGAGAAGATTGAGGTATAAAAGAAGTACTAGGAATTCTGTAGTAGTTTTTATATTTCCACTGTAATTACATTTCATTTTATTTTGAATGGTAGTCGGACATCTATTTGTGCAGCATTGTCGTAGTCTCTCTTCCCCTACCTTTCCGTGTTCATGTAAGTGCATGTATGTTTTGTGATTTCTTTTTATTATCTTTTATTATGGGGTTTCTAGGCCAATCAATTTCGCCTACTCTTTTTCTTTCTTTGTTTGGGTGGTGATTAGTGAGACTTGTGGCTTACGGGTTATGATGCTAATGATTTATTCCAATGTGAACTATTAATGTCTTGCTATAACACATTATGGATTCATATGGGATCACTTAAGAAATTGGAACTTATTTTTTTGTGTGAGAGTAATCAGAGGATCAAAACTCTGTCATTTGGATTCCCTTGTTTACAATAGTTGGTTATTAAGTATCCTTTCGAGTTACAGGCCCTGGATTTTGATGCTCCGAGCATTGAGAATTTAGAGCATGAAAATAAAAATGCCGGATTGCTTGGATAGGAACTTTTCTGACTTTATTTCCTAACTTGGAGATATTGCATATCGATCAAGTATGTTTGGAACTTTTGGATGTGATTGATGTTTCATCTGTTCATGAAGCAAAAATCAACAAGTGTTGTTTGTCTCGCGACAAGGTTGATTATTTTGAAATATTGCTCAAGAAGTTTCAAAACGCTAACCTTCATTTCTTTTTTGAAACTCTACATATTGATTTGTGTTATAACCTTCCTTTCTTTGTTGGTGTTTTTTGTTACTGGTTTTCTACTTTTCTTAAATTATCTACATACAATCCCATCCATTGTTGCTGTAAGAAAATCATTGATTTTATTTGTAGAAAGGGTAATGTTTTCACATGTTGATCTATCTGATTGCTTCTTCACAGGTTATAGCATCTCAAGATTGGCCAAAAGTAACAAAATAACAAAGTATGCAGGCATGGTATCTGCTCAGGCACACAAATAAGGAATTATACAAGATCTTTATAACCCTGGCAATATGCATTTTGAGATTGGATTTGATCGTTGATATTAACAAATACTTCTTAATATTCTACTATTGTTATTTTATTTTTGTAGGTAGCATTCATTAGTTCATGTATTGTTCAAAGTTAGTTTACAATCAAATTTGTCTTCGACTATATCCGTATCCTCGTTGGGTACGGGATTTGCTTTGTGTTTTGATACTTATTTTTCTATAACTTGGGGGACCGTATATTAGTGTTTTGGATCACACTAAGCGTTAAAACTGTGTATTCCTCAAGAGATCCTGGTTGAACGACACTGCTTATTGCTTATCACAAATATATTTTCTTCTCCAAACCACAAACTTGAAGAAGATTATAAGAACATTATGTGCATGTTTATGTTGAACAATTTTCGATCATGAGGCTTTTGGAGTCACCGATGCGTTGCAGTCCTAAGAGGATGTCTATCTTTCTCAGATAATGAAGTTGGATGTTGTTCTACCCAGATGGATGGAGATGGTACTTTCAGTGTTTCTGGGCTCTGGGCTCGCGAGTTTTCTGAAAGGGGTAAAGCTGGCAGAG AAGGGTCAGATCTTCGCGTGTTTTGATCAATTGAATGCTATTTTCGCTACTTTTGTTGATTGTTGATGGGATTCTGTATGGCCATCTCCCATCGAAGATCTGCTTTTCCTCCTTTGCTTCTTCCCACTCGCTCGAACCAAATCCAACACCAGAGATGAAGATTATTGCCGCTTGCTTGTTGGTTGCTTTGGGCGTGTCACCCTCTGCATTGCCATCTTTTGAAGTTCAGTCTCAGGCGTTTGGGAACATTCTTGTTGAAGTTTGTGGACCATTTTCTGAGGACTTGTGGAAGGGGATCATAATCAACAAGTTAACATTTTATGGCGTGAAGCTATGTTCACGATGCAAGGTTATAGCATCTCAAGATTGGCCAAAAGTAACAAAATAACAAAGTATGCAGGCATGGTATCTGCTCAGGCACACAAATAAGGAATTATACAAGATCTTTATAACCCTGGCAATATGCATTTTGAGATTGGATTTGATCGTTGATATTAACAAATACTTCTTAATATTCTACTATTGTTATTTTATTTTTGTAGGTAGCATTCATTAGTTCATGTATTGTTCAAAGTTAGTTTACAATCAAATTTGTCTTCGACTATATCCGTATCCTCGTTGGGTACGGGATTTGCTTTGTGTTTTGATACTTATTTTTCTATAACTTGGGGGACCGTATATTAGTGTTTTGGATCACACTAAGCGTTAAAACTGTGTATTCCTCAAGAGATCCTGGTTGAACGACACTGCTTATTGCTTATCACAAATATATTTTCTTCTCCAAACCACAAACTTGAAGAAGATTATAAGAACATTATGTGCATGTTTATGTTGAACAATTTTCGATCATGAGGCTTTTGGAGTCACCGATGCGTTGCAGTCCTAAGAGGATGTCTATCTTTCTCAGATAATGAAGTTGGATGTTGTTCTACCCAGATGGATGGAGATGGTACTTTCAGTGTTTCTGGGCTCTGGGCTCGCGAGTTTTCTGAAAGGGGTAAAGCTGGCAGAG ATGCTATTTTCGCTACTTTTGTTGATTGTTGATGGGATTCTGTATGGCCATCTCCCATCGAAGATCTGCTTTTCCTCCTTTGCTTCTTCCCACTCGCTCGAACCAAATCCAACACCAGAGATGAAGATTATTGCCGCTTGCTTGTTGGTTGCTTTGGGCGTGTCACCCTCTGCATTGCCATCTTTTGAAGTTCAGTCTCAGGCGTTTGGGAACATTCTTGTTGAAGTTTGTGGACCATTTTCTGAGGACTTGTGGAAGGGGATCATAATCAACAAGTTAACATTTTATGGCGTGAAGCTATGTTCACGATGCAAGGTTATAGCATCTCAAGATTGGCCAAAAGTAACAAAATAA MLFSLLLLIVDGILYGHLPSKICFSSFASSHSLEPNPTPEMKIIAACLLVALGVSPSALPSFEVQSQAFGNILVEVCGPFSEDLWKGIIINKLTFYGVKLCSRCKVIASQDWPKVTK Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo19744.1 vs. NCBI nr
Match: gi|902173054|gb|KNA08213.1| (hypothetical protein SOVF_164700 [Spinacia oleracea]) HSP 1 Score: 72.4 bits (176), Expect = 5.900e-10 Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 1
BLAST of Spo19744.1 vs. NCBI nr
Match: gi|731346859|ref|XP_010684676.1| (PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 70.9 bits (172), Expect = 1.700e-9 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 1
BLAST of Spo19744.1 vs. NCBI nr
Match: gi|731346857|ref|XP_010684675.1| (PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 70.9 bits (172), Expect = 1.700e-9 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 1
BLAST of Spo19744.1 vs. NCBI nr
Match: gi|695052840|ref|XP_009414493.1| (PREDICTED: mitochondrial amidoxime reducing component 2-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 69.3 bits (168), Expect = 5.000e-9 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 1
BLAST of Spo19744.1 vs. NCBI nr
Match: gi|731346855|ref|XP_010684674.1| (PREDICTED: mitochondrial amidoxime reducing component 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 68.2 bits (165), Expect = 1.100e-8 Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1
BLAST of Spo19744.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNE4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164700 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 4.100e-10 Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 1
BLAST of Spo19744.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXI6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165600 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.200e-9 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 1
BLAST of Spo19744.1 vs. UniProtKB/TrEMBL
Match: M0TVV7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.500e-9 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = 1
BLAST of Spo19744.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ES03_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165590 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.800e-9 Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1
BLAST of Spo19744.1 vs. UniProtKB/TrEMBL
Match: A0A067L3U9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26674 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.600e-8 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 1
BLAST of Spo19744.1 vs. TAIR (Arabidopsis)
Match: AT1G30910.1 (Molybdenum cofactor sulfurase family protein) HSP 1 Score: 60.1 bits (144), Expect = 1.100e-9 Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 1
BLAST of Spo19744.1 vs. TAIR (Arabidopsis)
Match: AT5G44720.1 (Molybdenum cofactor sulfurase family protein) HSP 1 Score: 56.6 bits (135), Expect = 1.200e-8 Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19744.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19744.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19744.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo19744.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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