Spo10452.1 (mRNA) | SpinachBase

Overview


Name	Spo10452.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Glycine-rich RNA-binding family protein
Location	chr5 : 30867746 .. 30874410 (-)
Sequence length	2469

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTTGACGGCATTGCGTTCTGCATAAACTCTCGACGACTCCACTAGTCCACTACAGAGAGAGGAGGTTAACTGGCAAGTGTAAAATTAGCAACTCTGCTTAACCACCGAATTAGGGTTTGTCTTCAGCAAGGTTCTCCCCTTTCACCTACTTTTTTTCAAATTGGCGACTAATTTATCGTCAAACCTTCGAATTTCACCTCTATTACTCTAACCTTCATCCCAATTTCTTGTTTTTGGGTAAAATTTTGCAGAAACTTTGAGAAAAAAATGGCTGCGAGAGATGGCTACCGTATTTTTGTTGGAGGGTTAGGTTGGAACACCTCGCAAAGGCACTTAGAAGATGCTTTTGTTCGTTATGGGAAAATCATTGATTCTTTGGTAATTATTTTTTGTTCTTTAAAATTTTAATATTTTGGTTGTGGTTGTTTATTTCTGAGCAATTTTGCTTATGGGTTGCAATTGTGATTTCTAACTGTTGTAAATTCATTAACTTCAACTATTGTGTTGTATGTTGTGATTTATAACTCATTATGCTTTAATTATTGTTAATTTGGGAAGATATTTACTTATGGGCTAGAAAGTTTAGAGTAATATTGGTTATTGAGACAAGTTTTAGGTGCATCGGTTGGTTGGTTAGAAAAGTTTGATTGACACTGGTGAAATTTGTGGGAGTAGTGTTTGGAAAGCAGCTGGTGCCAGATTCGTTTAAAATATTATTGCGAACTTTGAAAGAATCACTTCGGACAGTTTGGAGGTTGGGGATGCTTTCATAAAACAGTTTCTGAATTTTAATTTTCTTTTTGTACGAGCTGTTGGAACGGTAGTTGTCTGTTCGAGCTGTTGCAAAGGTAGAAATTGGTACAAGCTATGTTCAGGTGAGAATGCTTGGATATATAGGAGACTGCTTTCCCATTTTGAATGGTAGATGCACTGTTACATCACACGAAACACATGTTTAAGTACAAATCCACAATTTACTTATGGGAAAAGGCTTTCTTGCTTGTTTTCTGTAGATACATACTCCGTAAGTTGGTATGTTTCATAAAGTTTTGTCTCTTAAGTATAAGTAACTGCTGCATTGCAATGGATCCCGCTTTCCTTCCCCCAAAATTCACGCGGCGAGACGTGTATCTATTGCATTACTTGAACTTATTTTATATTAATTTGGTTATATGTACTGAAATGATTATCAGAAATATTATTTTTTATTAAATTTATTTCAGAAGTTAAAGCATAACATAGAAACAACAGAAGCAGGGGAAGCAGCCGATGTCGAATGGACCTATTCTATATTGTCTTTGGTCCACGTTGGAGAATTTGTTGTCTTGTGACTCTATCATCTTACATGCTTTTTATTTTTTGAAGTTTTAATTATGTATTAGTGCTATGATATTTTGAGTGTTAATTGGAGATACTAGCCTACCAATTGAAGTATTGCCTGATGCACGAAATTGTTTTGTTCCTATTGGAAAACTCAATTTGGGAATGGTTCTGTCAGTTACCTGTGATTTACGCCCTGTGAGGAAATGGAAAGGGAGCCAGTCTTGTTAATTTTTTCGCCCAAGAACCCCCTGCCTATACTTATTTGCATTTATTAGACCATTTGGGAACATATAAGACCTTATCTTTGATTGTGAATTGAACTTGATAGTCCTTATTTGAATTTACCTGGATTTAGATGTACAATTCCTTGATACTTAACATCAAAAGAACCAAGCCTTTTTGGGGTTAGTTTTTACTGTAAAGGTAATAGAAAAAATTATGGGAATTGTGTCTCTTATCTTCTAACTCTGCCGAAGATTTTCATGTCTTTGTTGCCTTAGATCTTGTGAAGAATTTTCATGTAATATATATATTTCATCTGTAGTTTGTTTGACTTCTTAGATAACTCAATATGGTATTCTTAGAGAAGGAAAAGGAGGACTGGTTAAGCAACACTGAGTTCTTTTATCAGATTGCTAAACACTGCTTCATTTATGCAGAAACAGTAAGGTGAAAATATGAGATATATAAACTAAAGCCTGAACTTGAGCTTAATATATGTAACCTGTTAATCATGATTTCATGGTACCTCGCTACCTTGTTTGAACTTTATCTTGACTTGTTTCTATTAGTCAGTTGCTCGTAGTTCTGAAATCTTTGGATATGTTCAGCATGATATATCAATAAAGCGAGTTGATTGCGTCTTTGCGATGATATTATTAGTCATTTGCAAACTGAAAACTTGGACTTTGCTGTTTGAATTTACTTTCAAGTGTCTGTTTGTATTGGGCAGGTTGTGAATTAGTTATGTTCTCATTTGTTTGTAATCTAATGTGAACTATGCCCACAAAGAACCTCTAGGTTGGCAATTCTCGACATCAAACCATACTTTGACATTTGCATATCTTGGTTAATTTTATTTTTTGTTATTATTATTGTGTGTCAAATTATTCCCCTTTTAACCTTAGATATTCAACCACTGGCTATCTTTAAATGACTTATTTTGAATAGAAGTTTAGAACATAATGATGGTCGTTTTCCTTGTCCTGGAGGACCTTCTAGAATTACGTAATCATTCTCCTAACCTCTAGTCAATGAAATTGTCTCTGTGAGCTTGCATCTGAACACTTTGAAACTCAATTAACCATATGTAGCTGAATGCTAAAGCAGTATCCTGATATCCTCATTTCTTCCAATGATAACAAATATGCAAGTTACAGTAGCTCCTCTTATTGTCTCCTTCCTTTGGTCTAGATCTCAAACATAGAGACATGCATCAAGCGCATTTCTAGTGCATCCTAAACGATTACCCCAATTCTTCCAGTGTTTACAAAAGTACATCTGCAATTCTGGTTTACAGTATTTTATAATTAAGATGACTAGGGGAGTAAGGGTACATGCTCTCATGCATACATCATAAATGTGTATGAATTTCAAATGAAACATTAGGCAAGAGTAAAATGGGTTTCTTCTTTGGTCAAATATTCTTTGTGTGTGTGTATCTTTGTGTTTTCTCTCTCTTCCCTTAATGCGACATAATGTTTTCTTCTTTATTACGCTGAAGAATTATACATTACTTAATGACAATATTGTGTTAGTAGTGGGCATACAAAGGTTCAGTAAGTTTTTTAATGATTTCACACAGTTGAATGAGTAATATGTGAAAGCATGTAAAAGTGACTCATATTAGGTTCTCCTGCCTGCAACCATCTTCAAGCTAGTGTCATTTCTTCTCTGTTTTTGTGGATTTTGAAAAGTAAAGGAGGATGAGAGATTGAGAATGCAAGTCTGAATTTATGAAATAAGAAGTGCATCGGGTTTTAACATTCATGCTGGAAGTATACAAAGTGAATTAAAGAAAGTAAATACTCCACCTTTTGGTAATATAGCACATGCGGTATGTTGGGATGCCATGTCTGTCACCCTTCCAAATACTAGAATCATTATTTTTGGACTTCCCAAGATACCTCTACTTCAATTGAGTGATGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGTTAGTGTGAAAACGGTCCAACTATTTTAAAGAGTCTTTCAGTAAAATCATGCTAATTTTTTAGTTATGTGCTTATGCCGGATCCGGGCAGTATGATAACCTTTTCTAGATAGAGGTAGTACATTACAAAAAAATAAAACAGTCATTCTGAATTTGACACTAAATAAAGCTATGAGGTATTGCTGAATCTTCCAAAGTCTTGCAAATTCTAACGTCTTTTTCATGAAAAAATGAAGTAATTGTAATCTTTAATTATGTTTTGAGGCACACCTCTTATGCTTAAGCACCTTCAGTGCTATTAGAGACCATCAACCACTTGGATTCTTGATACTTACATTTGATAGAACAATGTAATATCTGGTTGTTAAAATTATGAAGAAGTCTGAAACATCACTGTATGGTAATTAAAGTTGTGCTTCTTGACTTCTTCAGCATGCATAACTATACTTTAGAATGGCATATGTGTAGAATTCAATGAGAAAAGAGCAACGCTGGCCACTGGTTGTTCAGTATGCATAACTATTTTTTAGAATGGCATATGTGTAGAATTCAATGAAAAAAGAGCAACGCTGGCCACTGGTTGGTTGACTTGAAGATCTTTGGTTTTGGGGACTGTAATTTATGTGTTTGTCTTGTCCATCACTTCATTTTTAAATATACCAGCTTTGACTTTTGACACTGCAAATCTTCTGCAGCCTTGTATACAAAAGTTGAAGAATCTTATCTATGTTTATGCATAGTTATTTCATGTGAGTATGTGACCTATGCCTCAATCCAAATGTTTTTGTTCTTGTATGTTTACAAGTTATCTATAGAATGTTAACATTATCTGAAAATAAAATGTTAACATTATCAGGATGCTTTCTTATTTTATGCCCAAGTATTTAGGTCAAATACAATAAACTTTATGTAATGCTGTTGTGAATGAGGAATTACTATGTTTTATCATTTTAGGTAATGGTGGACAGGGAGACTGGCCGCCCTCGTGGATTTGGATTCATAACATTTGCTGACCGCAGAGCTATGGAAGATGCCATAAGGAGTATGCATGGAAGAGAGTTGGATGGCCGGGTTATCTCAGTGAACAAGGCAGAGCCACGAATGGGAGCTGAGGATCCTTATGATGCTTATGGTGGAGATCGTAGATCAGGTGGTAGGGAGAGCTACAGAGGTGGAGAAAGACCGGGGGAGCGATCTGATGAGTGCTTTAAGTGTGGTCGTGCAGGGCACTGGGCTAGGGATTGCCCTTCGAACGGCGGTGGCAGGTACTCGTCACAATCTGAATTTGGTAGATCTGGTCTACAGGGAGATCGTGATTATGATCGTCATTACGATCGTGCTGGTGGGGGGCGTTATGACAGTAGAGATCGTTTAGAGAGCAGAGATGTGTATGTGTCCCGTGATCGCTATAGCACTGAAAGGTACCCTCCTGCTGGTGATCGTTTTGGAAGTGATAGATTTATGGATCGATACCCCCAAAATGGATATGTCCGGGACAGGGATTATGAAAGGGATGGAGGCATTAGAGGTGGTGATAGGTATGCTGCTGGCGGACCAACCCGTTATGACAAAGGAAGCTACAGAGACCGGGTTCACCCTTATGATGCTCCTCGGAGAACCAGCCGGCGTTGATATCGTGTTTGTTGGCAATGCTCCTCACGTGCTGTGCAAACTTTTGTTTGTCCGAACTATTCAGTTTAGAGTTTTGATTTCTAGATAGCTGCATAAATGCTGGATATCGTCTTCTGTTCATATCCTGCCCAGATAAGCTGTGTGTTGTGCAGACCTTTTTTTTCCGGCTCTTATGGATAATTAAGCTGAATTTGGTAGCAAAGATGCAATATGTGGAAGCAGTAGAGTGAATTTCTAACACCTCTAGCTGGCAGCATGGACTGGTAAAACAAAATTAATGTAGTATTTCTACCATTCTACCAATGACTGGATATTCTGCTTCAGGAGTGTGTCTGAGAAAGTTAAGACTCTTTTGTAGCTTCTTTGATTTGCTGTTTCTAGTATGCATGAGTGGCTGTCTTTTAGAGTTTGAAGTTGCAACTGTTCCTGTGCTCATTGTTGCTGCCAGTAAGATCTTCTGAGGTTGATGGTTGTGGTCCAGTATTGTCGTTGCTGCAGCCAGTCAGGATGGAGACAGAGTCCGGTTTTGACAGGGTTTTGTGCTTTCTTTGAGATTAATCAATCTGGTTTGGTGTTTTGTCCAGCCCAACACAGGTTATGCTTAATTCTTTTTTCGATGTGAAGCTTTTGTGCAGCCAATTAAGTTGATGAAAGGCCTTTTTTGTTTATTTCACCTTTTTGGCCATCATTATACATTTATCGGTGGTAAATTTGCATACTGGCCTTCATTTTTCTTTTTGCCGAATTCCTAATGATATGGGAAGAAAAGGCTGCTGATAAAATCTGAGACTTGAGAAGGAGCCTAGATGTAGATACTGCTTTTCTATGCGCCTTATGTAGAGGATTGGTGAGTTTAATGTGCTTGCATCAGGAGGATTAAAGGCATCATGAGAATTGTGGTGTTGTTTTTGAGGAACCATGAGATTGGTAGCATGTGATTGAACAACTTGGTTTGTTGCATTCAGTGTTGACATGGATTTCTCGAGTTTAGAGGTGGCGTTGTTGCTGAGAAGCAGCAGTTATGAATAGTTGATCCAAAATTCAGCTGCGAGGCCTTGCTCTTTCGTAACCCAAAAGAAGCCAGTACCCTTTTTGTGTTTGAGATCAATACTGTGGAGACCACCTTATTAGGAGGACTGTAGGAGTAGGGAGGAGAGTGCTTGAATATATAAACTGTAAAGCTATCGAAATCTGTCTTGATGCTGGTTTTAGTAGAATGTAAGAATAATGATGAGTTTAATCATTTTGAAGGGCTTGATCAGTGATTATTGGAGCTTGTTGAAGTATCTCATTGAGAAGGTTAGGATTTAATTGAATTTATTGTTTCACTTGTATACAGTTGCCTAAATGATCCTTAAAAACACAGATGTTATAAGGGCTGAATCACGATAATACAGGTGATAAGTCATGGGATTAAATTATGTGTCCAATCCCCTAGCTATTGCTATCCGGGCTTTTATGTGGTCTGTCATTTCTTTACTCATTGTCAAGTTGTGGGAGCATATGTACGGTTGCAATAATGGAGTTTTTGG

mRNA sequence

GAGTTGACGGCATTGCGTTCTGCATAAACTCTCGACGACTCCACTAGTCCACTACAGAGAGAGGAGGTTAACTGGCAAGTGTAAAATTAGCAACTCTGCTTAACCACCGAATTAGGGTTTGTCTTCAGCAAGAAACTTTGAGAAAAAAATGGCTGCGAGAGATGGCTACCGTATTTTTGTTGGAGGGTTAGGTTGGAACACCTCGCAAAGGCACTTAGAAGATGCTTTTGTTCGTTATGGGAAAATCATTGATTCTTTGGTAATGGTGGACAGGGAGACTGGCCGCCCTCGTGGATTTGGATTCATAACATTTGCTGACCGCAGAGCTATGGAAGATGCCATAAGGAGTATGCATGGAAGAGAGTTGGATGGCCGGGTTATCTCAGTGAACAAGGCAGAGCCACGAATGGGAGCTGAGGATCCTTATGATGCTTATGGTGGAGATCGTAGATCAGGTGGTAGGGAGAGCTACAGAGGTGGAGAAAGACCGGGGGAGCGATCTGATGAGTGCTTTAAGTGTGGTCGTGCAGGGCACTGGGCTAGGGATTGCCCTTCGAACGGCGGTGGCAGGTACTCGTCACAATCTGAATTTGGTAGATCTGGTCTACAGGGAGATCGTGATTATGATCGTCATTACGATCGTGCTGGTGGGGGGCGTTATGACAGTAGAGATCGTTTAGAGAGCAGAGATGTGTATGTGTCCCGTGATCGCTATAGCACTGAAAGGTACCCTCCTGCTGGTGATCGTTTTGGAAGTGATAGATTTATGGATCGATACCCCCAAAATGGATATGTCCGGGACAGGGATTATGAAAGGGATGGAGGCATTAGAGGTGGTGATAGGTATGCTGCTGGCGGACCAACCCGTTATGACAAAGGAAGCTACAGAGACCGGGTTCACCCTTATGATGCTCCTCGGAGAACCAGCCGGCGTTGATATCGTGTTTGTTGGCAATGCTCCTCACGTGCTGTGCAAACTTTTGTTTGTCCGAACTATTCAGTTTAGAGTTTTGATTTCTAGATAGCTGCATAAATGCTGGATATCGTCTTCTGTTCATATCCTGCCCAGATAAGCTGTGTGTTGTGCAGACCTTTTTTTTCCGGCTCTTATGGATAATTAAGCTGAATTTGGTAGCAAAGATGCAATATGTGGAAGCAGTAGAGTGAATTTCTAACACCTCTAGCTGGCAGCATGGACTGGTAAAACAAAATTAATGTAGTATTTCTACCATTCTACCAATGACTGGATATTCTGCTTCAGGAGTGTGTCTGAGAAAGTTAAGACTCTTTTGTAGCTTCTTTGATTTGCTGTTTCTAGTATGCATGAGTGGCTGTCTTTTAGAGTTTGAAGTTGCAACTGTTCCTGTGCTCATTGTTGCTGCCAGTAAGATCTTCTGAGGTTGATGGTTGTGGTCCAGTATTGTCGTTGCTGCAGCCAGTCAGGATGGAGACAGAGTCCGGTTTTGACAGGGTTTTGTGCTTTCTTTGAGATTAATCAATCTGGTTTGGTGTTTTGTCCAGCCCAACACAGGTTATGCTTAATTCTTTTTTCGATGTGAAGCTTTTGTGCAGCCAATTAAGTTGATGAAAGGCCTTTTTTGTTTATTTCACCTTTTTGGCCATCATTATACATTTATCGGTGGTAAATTTGCATACTGGCCTTCATTTTTCTTTTTGCCGAATTCCTAATGATATGGGAAGAAAAGGCTGCTGATAAAATCTGAGACTTGAGAAGGAGCCTAGATGTAGATACTGCTTTTCTATGCGCCTTATGTAGAGGATTGGTGAGTTTAATGTGCTTGCATCAGGAGGATTAAAGGCATCATGAGAATTGTGGTGTTGTTTTTGAGGAACCATGAGATTGGTAGCATGTGATTGAACAACTTGGTTTGTTGCATTCAGTGTTGACATGGATTTCTCGAGTTTAGAGGTGGCGTTGTTGCTGAGAAGCAGCAGTTATGAATAGTTGATCCAAAATTCAGCTGCGAGGCCTTGCTCTTTCGTAACCCAAAAGAAGCCAGTACCCTTTTTGTGTTTGAGATCAATACTGTGGAGACCACCTTATTAGGAGGACTGTAGGAGTAGGGAGGAGAGTGCTTGAATATATAAACTGTAAAGCTATCGAAATCTGTCTTGATGCTGGTTTTAGTAGAATGTAAGAATAATGATGAGTTTAATCATTTTGAAGGGCTTGATCAGTGATTATTGGAGCTTGTTGAAGTATCTCATTGAGAAGGTTAGGATTTAATTGAATTTATTGTTTCACTTGTATACAGTTGCCTAAATGATCCTTAAAAACACAGATGTTATAAGGGCTGAATCACGATAATACAGGTGATAAGTCATGGGATTAAATTATGTGTCCAATCCCCTAGCTATTGCTATCCGGGCTTTTATGTGGTCTGTCATTTCTTTACTCATTGTCAAGTTGTGGGAGCATATGTACGGTTGCAATAATGGAGTTTTTGG

Coding sequence (CDS)

ATGGCTGCGAGAGATGGCTACCGTATTTTTGTTGGAGGGTTAGGTTGGAACACCTCGCAAAGGCACTTAGAAGATGCTTTTGTTCGTTATGGGAAAATCATTGATTCTTTGGTAATGGTGGACAGGGAGACTGGCCGCCCTCGTGGATTTGGATTCATAACATTTGCTGACCGCAGAGCTATGGAAGATGCCATAAGGAGTATGCATGGAAGAGAGTTGGATGGCCGGGTTATCTCAGTGAACAAGGCAGAGCCACGAATGGGAGCTGAGGATCCTTATGATGCTTATGGTGGAGATCGTAGATCAGGTGGTAGGGAGAGCTACAGAGGTGGAGAAAGACCGGGGGAGCGATCTGATGAGTGCTTTAAGTGTGGTCGTGCAGGGCACTGGGCTAGGGATTGCCCTTCGAACGGCGGTGGCAGGTACTCGTCACAATCTGAATTTGGTAGATCTGGTCTACAGGGAGATCGTGATTATGATCGTCATTACGATCGTGCTGGTGGGGGGCGTTATGACAGTAGAGATCGTTTAGAGAGCAGAGATGTGTATGTGTCCCGTGATCGCTATAGCACTGAAAGGTACCCTCCTGCTGGTGATCGTTTTGGAAGTGATAGATTTATGGATCGATACCCCCAAAATGGATATGTCCGGGACAGGGATTATGAAAGGGATGGAGGCATTAGAGGTGGTGATAGGTATGCTGCTGGCGGACCAACCCGTTATGACAAAGGAAGCTACAGAGACCGGGTTCACCCTTATGATGCTCCTCGGAGAACCAGCCGGCGTTGA

Protein sequence

MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRAMEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDECFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESRDVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTRYDKGSYRDRVHPYDAPRRTSRR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo10452	Spo10452	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo10452.1	Spo10452.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10452.1.utr5p.2	Spo10452.1.utr5p.2	five_prime_UTR
Spo10452.1.utr5p.1	Spo10452.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10452.1.CDS.2	Spo10452.1.CDS.2	CDS
Spo10452.1.CDS.1	Spo10452.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10452.1.utr3p.1	Spo10452.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10452.1.exon.3	Spo10452.1.exon.3	exon
Spo10452.1.exon.2	Spo10452.1.exon.2	exon
Spo10452.1.exon.1	Spo10452.1.exon.1	exon

Homology

[Close]

BLAST of Spo10452.1 vs. NCBI nr
Match: gi|902195820|gb|KNA12961.1| (hypothetical protein SOVF_121460 [Spinacia oleracea])

HSP 1 Score: 540.8 bits (1392), Expect = 1.300e-150
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA
Sbjct: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120
           MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE
Sbjct: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120

Query: 121 CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESR 180
           CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESR
Sbjct: 121 CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESR 180

Query: 181 DVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTR 240
           DVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTR
Sbjct: 181 DVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTR 240

Query: 241 YDKGSYRDRVHPYDAPRRTSRR 263
           YDKGSYRDRVHPYDAPRRTSRR
Sbjct: 241 YDKGSYRDRVHPYDAPRRTSRR 262

[Close]

BLAST of Spo10452.1 vs. NCBI nr
Match: gi|731368707|ref|XP_010696295.1| (PREDICTED: glycine-rich RNA-binding protein RZ1C [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 476.9 bits (1226), Expect = 2.300e-131
Identity = 229/262 (87.40%), Postives = 243/262 (92.75%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MA R+ YRIFVGGLGWNTSQRHLED F RYGKIID LVMVDRETGRPRGFGFITFADRRA
Sbjct: 1   MAGREDYRIFVGGLGWNTSQRHLEDEFARYGKIIDCLVMVDRETGRPRGFGFITFADRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120
           MEDAIR MHGRELDGRVISVNKAEPRMGAEDPY AYGGDRRSGGRESYRGG++ G+RSDE
Sbjct: 61  MEDAIRGMHGRELDGRVISVNKAEPRMGAEDPYAAYGGDRRSGGRESYRGGDKLGDRSDE 120

Query: 121 CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESR 180
           CFKCGRAGHWARDCPS+GGGRYSSQSEFGRS LQG+RDYDR+Y+R  GGRY+SRDRL++R
Sbjct: 121 CFKCGRAGHWARDCPSSGGGRYSSQSEFGRSSLQGERDYDRYYERPSGGRYESRDRLDNR 180

Query: 181 DVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTR 240
           D Y  RDRYS +RYP AGDRFGSDRF DRYPQNGY RDRDYERDGGIRGGDRYAAGGPTR
Sbjct: 181 DGYGPRDRYSNDRYPSAGDRFGSDRFADRYPQNGYGRDRDYERDGGIRGGDRYAAGGPTR 240

Query: 241 YDKGSYRDRVHPYDAPRRTSRR 263
           YDKGS+RDR HPYDAPRR+SRR
Sbjct: 241 YDKGSFRDRAHPYDAPRRSSRR 262

[Close]

BLAST of Spo10452.1 vs. NCBI nr
Match: gi|720036055|ref|XP_010267222.1| (PREDICTED: glycine-rich RNA-binding, abscisic acid-inducible protein-like [Nelumbo nucifera])

HSP 1 Score: 328.2 bits (840), Expect = 1.300e-86
Identity = 174/275 (63.27%), Postives = 203/275 (73.82%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MA ++  RIFVGGL W+T++R LEDAF RYGKI++S +M+DR+TGRPRGFGF+TFADRR 
Sbjct: 1   MAGKEEMRIFVGGLSWDTTERQLEDAFSRYGKIVESQIMLDRDTGRPRGFGFVTFADRRG 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120
           MEDAIR MHGREL GRVISVNKA+P+MG ++P   YGG   SGGR SY GG+R   RSD 
Sbjct: 61  MEDAIREMHGRELAGRVISVNKAQPKMGGDEPGYGYGGGYSSGGRGSYGGGDRSAGRSD- 120

Query: 121 CFKCGRAGHWARDCPSNG---GGRYSSQSEFGRSG-----LQGDRDYDRHY-DRAGGGRY 180
           CFKCGR GHWAR+CPS G   GGR+SS S F   G       GDR  DRH  DR  G RY
Sbjct: 121 CFKCGRPGHWARECPSAGGGDGGRFSSHSRFSGGGGRGDRFGGDRYNDRHMDDRYDGRRY 180

Query: 181 DSRDRLESRDV-YVSRDRYSTERYPPAGDRFGSDRF--MDRYPQNGYVRDRDYERDGGIR 240
             RDR++SRD  Y  RDRY+ +RYPP+GDRF  DR+   DRYPQNGY +DR+Y+RDGG R
Sbjct: 181 GDRDRVDSRDTRYGGRDRYANDRYPPSGDRFVGDRYGGSDRYPQNGYGKDRNYDRDGGPR 240

Query: 241 --GGDRYAAGGPTRYDKGSYRDRVHPYDAPRRTSR 262
             GGDRY +GGP RY+ GSYRDR  PYD P R  R
Sbjct: 241 GGGGDRYGSGGPARYEGGSYRDRPGPYDRPSRGGR 274

[Close]

BLAST of Spo10452.1 vs. NCBI nr
Match: gi|694386285|ref|XP_009368935.1| (PREDICTED: glycine-rich RNA-binding protein GRP2A-like [Pyrus x bretschneideri])

HSP 1 Score: 302.4 bits (773), Expect = 7.800e-79
Identity = 170/278 (61.15%), Postives = 199/278 (71.58%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MA ++ YRIFVGGL W+ ++R LE AF R+GK+I++ +M++RET RPRGFGFITF DRRA
Sbjct: 1   MAGKEDYRIFVGGLSWDVTERQLESAFQRFGKVIEAQIMMERETNRPRGFGFITFGDRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMG----AEDPYDAY-GGDRRSGGRESYRGGERPG 120
           MEDAIR MHGREL  R+ISVNKA+P+MG     ED    Y GG   SGGR +Y GG+RP 
Sbjct: 61  MEDAIREMHGRELSDRIISVNKAQPKMGGGGAGEDSDHGYRGGGYSSGGRRNYGGGDRP- 120

Query: 121 ERSDECFKCGRAGHWARDCPSNG-----GGRYSSQSEFGRSGLQGDR---DYDRHY-DRA 180
              DECFKCGR GHWARDCPS G      G +SS S FG  G +GDR   D DR+  DR 
Sbjct: 121 VGQDECFKCGRPGHWARDCPSAGXXXXXXGSFSSHSRFGAGG-RGDRFGGDRDRYMDDRY 180

Query: 181 GGGRYDSRDRLESR-DVYVSRDRYSTERYPPAGDRFGSDRF--MDRYPQNGYVRDRDYER 240
            GGRY  RDR +SR D Y SRDRY+++RY PAGDRF SDR+   DRYPQNGY +DR Y+R
Sbjct: 181 DGGRYGERDRFDSRDDKYGSRDRYASDRY-PAGDRFASDRYGGSDRYPQNGYGKDRGYDR 240

Query: 241 DGGIRGGDRYAAGGPTRYDKGSYRDRVHPYDAPRRTSR 262
           DGG RGGDRYA+GGP R D  +YR R  PYD P R  R
Sbjct: 241 DGGARGGDRYASGGPARGD--NYRSRPGPYDRPSRGGR 273

[Close]

BLAST of Spo10452.1 vs. NCBI nr
Match: gi|657975437|ref|XP_008379568.1| (PREDICTED: glycine-rich RNA-binding, abscisic acid-inducible protein-like isoform X1 [Malus domestica])

HSP 1 Score: 302.0 bits (772), Expect = 1.000e-78
Identity = 169/278 (60.79%), Postives = 200/278 (71.94%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MA ++ YRIFVGGL W+ ++R LE AF R+GK++++ +M++R+T RPRGFGFITF DRRA
Sbjct: 1   MAGKEDYRIFVGGLSWDVTERQLESAFQRFGKVLEAQIMMERDTNRPRGFGFITFGDRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMG----AEDPYDAY-GGDRRSGGRESYRGGERPG 120
           MEDAIR MHGREL  R+ISVNKA+P+MG     ED    Y GG   SGGR +Y GG+RP 
Sbjct: 61  MEDAIREMHGRELSDRIISVNKAQPKMGXGGAGEDSDHGYRGGGYSSGGRRNYGGGDRP- 120

Query: 121 ERSDECFKCGRAGHWARDCPSNGGGR-----YSSQSEFGRSGLQGDR---DYDRHY-DRA 180
              DECFKCGR GHWARDCPS GGGR     +SS S FG  G +GDR   D DR+  DR 
Sbjct: 121 VGQDECFKCGRPGHWARDCPSAGGGRGGGGSFSSHSRFGAGG-RGDRFGGDRDRYMDDRY 180

Query: 181 GGGRYDSRDRLESR-DVYVSRDRYSTERYPPAGDRFGSDRF--MDRYPQNGYVRDRDYER 240
            GGRY  RDR +SR D Y SRDRY+++RY PAGDRF SDR+   DRY QNGY +DR Y+R
Sbjct: 181 DGGRYGERDRFDSRDDKYGSRDRYASDRY-PAGDRFXSDRYGGSDRYXQNGYGKDRGYDR 240

Query: 241 DGGIRGGDRYAAGGPTRYDKGSYRDRVHPYDAPRRTSR 262
           DGG RGGDRYA+GGP R D  +YR R  PYD P R  R
Sbjct: 241 DGGARGGDRYASGGPARGD--NYRSRPGPYDRPSRGGR 273

[Close]

BLAST of Spo10452.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0B7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121460 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 9.100e-151
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA
Sbjct: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120
           MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE
Sbjct: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120

Query: 121 CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESR 180
           CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESR
Sbjct: 121 CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESR 180

Query: 181 DVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTR 240
           DVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTR
Sbjct: 181 DVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTR 240

Query: 241 YDKGSYRDRVHPYDAPRRTSRR 263
           YDKGSYRDRVHPYDAPRRTSRR
Sbjct: 241 YDKGSYRDRVHPYDAPRRTSRR 262

[Close]

BLAST of Spo10452.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B731_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179050 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 1.600e-131
Identity = 229/262 (87.40%), Postives = 243/262 (92.75%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MA R+ YRIFVGGLGWNTSQRHLED F RYGKIID LVMVDRETGRPRGFGFITFADRRA
Sbjct: 1   MAGREDYRIFVGGLGWNTSQRHLEDEFARYGKIIDCLVMVDRETGRPRGFGFITFADRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120
           MEDAIR MHGRELDGRVISVNKAEPRMGAEDPY AYGGDRRSGGRESYRGG++ G+RSDE
Sbjct: 61  MEDAIRGMHGRELDGRVISVNKAEPRMGAEDPYAAYGGDRRSGGRESYRGGDKLGDRSDE 120

Query: 121 CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESR 180
           CFKCGRAGHWARDCPS+GGGRYSSQSEFGRS LQG+RDYDR+Y+R  GGRY+SRDRL++R
Sbjct: 121 CFKCGRAGHWARDCPSSGGGRYSSQSEFGRSSLQGERDYDRYYERPSGGRYESRDRLDNR 180

Query: 181 DVYVSRDRYSTERYPPAGDRFGSDRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPTR 240
           D Y  RDRYS +RYP AGDRFGSDRF DRYPQNGY RDRDYERDGGIRGGDRYAAGGPTR
Sbjct: 181 DGYGPRDRYSNDRYPSAGDRFGSDRFADRYPQNGYGRDRDYERDGGIRGGDRYAAGGPTR 240

Query: 241 YDKGSYRDRVHPYDAPRRTSRR 263
           YDKGS+RDR HPYDAPRR+SRR
Sbjct: 241 YDKGSFRDRAHPYDAPRRSSRR 262

[Close]

BLAST of Spo10452.1 vs. UniProtKB/TrEMBL
Match: B9HL79_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s03290g PE=4 SV=2)

HSP 1 Score: 299.7 bits (766), Expect = 3.500e-78
Identity = 162/274 (59.12%), Postives = 199/274 (72.63%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           M+ ++  RIFVGGL W+ ++R LE+AF R+GKI++  VM++R+TGRPRGFGFITFADRRA
Sbjct: 1   MSGKEENRIFVGGLSWDITERQLENAFDRFGKIVECQVMLERDTGRPRGFGFITFADRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120
           M+DAIR MHGR+   RVISVNKA+P+MG +D    Y G   +G R  Y GG+RP  + DE
Sbjct: 61  MDDAIREMHGRDFGDRVISVNKAQPKMGGDDSDHGYRGGYSTGSRGGYGGGDRPAGQ-DE 120

Query: 121 CFKCGRAGHWARDCPS-----NGGGRYSSQSEFGRSGLQGDR---DYDRHY-DRAGGGRY 180
           CFKCGR+GHWARDCPS      GGG  SS+S FG +G +GDR   D DR+  DR  GGRY
Sbjct: 121 CFKCGRSGHWARDCPSAGARGGGGGLLSSRSRFGGAGDRGDRFGGDRDRYMDDRYDGGRY 180

Query: 181 DSRDRLESRDVYVSRDRYSTERYPPA-GDRFGSDRF--MDRYPQNGYVRDRDYERDGGIR 240
             RDR ESRD Y  RDRY+++RYPP  GDRF  DR+   DRY QNGY +DR Y+RDGG R
Sbjct: 181 GDRDRFESRDKYGGRDRYASDRYPPPNGDRFAGDRYSGSDRYAQNGYGKDRGYDRDGGPR 240

Query: 241 GG-DRYAAGGPTRYDKGSYRDRVHPYDAPRRTSR 262
           GG DRY +GGP+R D+ SY++R  PYD P R  R
Sbjct: 241 GGNDRYGSGGPSRNDR-SYKNRPGPYDRPSRGGR 272

[Close]

BLAST of Spo10452.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LQB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G324460 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77
Identity = 165/277 (59.57%), Postives = 199/277 (71.84%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MA++D YRIFVGGL WN S+R LE+AF+R+GK++++ +M++R+TGRPRGFGFITFADRR 
Sbjct: 1   MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAY-GGDRRSGGRESYRGGERPGERSD 120
           M+DAIR MHG+EL  R+ISVNKAEP+M  +D    + GG   SGGR S+  G+      D
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFGRGKDRSVGQD 120

Query: 121 ECFKCGRAGHWARDCPSNGGGR------YSSQSEFGRSGLQGDR---DYDRHYD-RAGGG 180
           ECFKCGR GHWARDCPS GGGR      +SS+S F   G +GDR   D DR+ D R  GG
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDG-RGDRFGGDRDRYVDERYNGG 180

Query: 181 RYDSRDRLESR-DVYVSRDRYSTERYPPAGDRF-GSDRF--MDRYPQNGYVRDRDYERDG 240
           RY  RDR + R D Y SRDRY  +RYP AGDRF GSDR+   DRYPQNGYV+DR Y+RD 
Sbjct: 181 RYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDI 240

Query: 241 GIR-GGDRYAAGGPTRYDKGSYRDRVHPYDAPRRTSR 262
           G R G DRY +GGP R++  SYRDR  PYD P R  R
Sbjct: 241 GPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGR 276

[Close]

BLAST of Spo10452.1 vs. UniProtKB/TrEMBL
Match: B9HUL0_POPTR (Glycine-rich RNA-binding family protein OS=Populus trichocarpa GN=POPTR_0010s23550g PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77
Identity = 159/271 (58.67%), Postives = 197/271 (72.69%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MA ++  RIFVGGL W+ ++R LE+AF R+GKI++S VM++R+TGRPRGFGFITFADRRA
Sbjct: 1   MAGKEENRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDE 120
           M+DAIR MHGR+   RVISVNKA+P++G +D    Y G   +G R  Y GG+RP  + DE
Sbjct: 61  MDDAIREMHGRDFGDRVISVNKAQPKIGGDDSDHGYRGGYSTGSRGGYGGGDRPAGQ-DE 120

Query: 121 CFKCGRAGHWARDCPS-----NGGGRYSSQSEFGRSGLQGDR---DYDRHY-DRAGGGRY 180
           CFKCGR+GHWARDCPS      GGG  SS+S FG +G +GDR   D DR+  DR  GGRY
Sbjct: 121 CFKCGRSGHWARDCPSAGGRGGGGGLISSRSRFGGAGDRGDRFGGDRDRYIDDRYDGGRY 180

Query: 181 DSRDRLESRD-VYVSRDRYSTERYPPAGDRFGSDRF--MDRYPQNGYVRDRDYERDGGIR 240
             +DR +SRD  Y  RDRY+++RYPP GDRF  DR+   DRY QNGY +D+ Y+RD G R
Sbjct: 181 GDKDRFDSRDNKYGGRDRYASDRYPPNGDRFSGDRYGGSDRYAQNGYGKDKGYDRDVGPR 240

Query: 241 GG-DRYAAGGPTRYDKGSYRDRVHPYDAPRR 259
           GG DRY +GGP R D+ SYR+R  PYD P R
Sbjct: 241 GGNDRYGSGGPQRNDRSSYRNRPAPYDRPSR 270

[Close]

BLAST of Spo10452.1 vs. ExPASy Swiss-Prot
Match: RZ1C_ARATH (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana GN=RZ1C PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.700e-57
Identity = 145/296 (48.99%), Postives = 186/296 (62.84%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MAA++G RIFVGGL    + R LE AF R+G I+D  +M++R+TGR RGFGFITFADRRA
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYG--GDRRSG----GRESYRGGERP 120
           M+++IR MHGR+   RVISVN+AEP++G +D  +++G  G R SG    G+ S+ GG   
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDG-ESHGSRGGRDSGYSIAGKGSFGGGGGG 120

Query: 121 GER--SDECFKCGRAGHWARDCPSNGGGR------YSSQ-SEFGRSGLQGDR--DYDRHY 180
           G R   DECFKCGR GHWARDCPS GGGR      +SS+ S +G S  + DR  D DR+ 
Sbjct: 121 GGRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYV 180

Query: 181 DRA--------GGGRYDSRDRLESRDVYVSRDRYSTERYPPAGDRF-GSDRF---MDRYP 240
           DR         G  RY +RDR +SR+ Y+ RDRY+++RY    DRF G DR+    DRYP
Sbjct: 181 DRERYIDDRYDGAARYGARDRFDSREAYIPRDRYASDRYAAPADRFAGGDRYSRGSDRYP 240

Query: 241 QNGYVRDRDYERD-GGIRGGDRYA---AGGPTR---YDKGSYRDRV-HPYDAPRRT 260
              Y + R +ERD     G DRY    AGGP R    +   +R R   PY+ P R+
Sbjct: 241 PGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRS 295

[Close]

BLAST of Spo10452.1 vs. ExPASy Swiss-Prot
Match: RZ1B_ARATH (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana GN=RZ1B PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.300e-54
Identity = 132/282 (46.81%), Postives = 159/282 (56.38%), Query Frame = 1


		  
Query: 8   RIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRAMEDAIRS 67
           RIFVGGL W+ ++R LE  F RYGKI +  +MV R+TGRPRGFGFITF DRR  +DAI+ 
Sbjct: 13  RIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIKH 72

Query: 68  MHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDECFKCGRA 127
           MHGREL  +VISVNKAEP++G ED         + GG  S RG        DECFKC R 
Sbjct: 73  MHGRELGNKVISVNKAEPKVGGEDV-----DQLKKGGGYSSRG----KGTEDECFKCRRP 132

Query: 128 GHWARDCPSNGGGRY----------------SSQSEFGRSGLQGDRDYDRHYDR------ 187
           GHWARDCPS G  R                   +  +G   L+ +R+ +R +DR      
Sbjct: 133 GHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFDRYMDGRR 192

Query: 188 -AGGGRYDSRDRLESRDVYVSRDRYSTERYPPAGDRFGSDRF--MDRYPQNGY-VRDRDY 247
              GGRY  RDR +S D Y  RD Y  ERY P GDRF SDR+   + + +N Y  R+R Y
Sbjct: 193 DRDGGRYSYRDRFDSGDKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLENEYRGRERSY 252

Query: 248 ERDGGIRG-GDRYAAGGPTRYDKGSYRDRVHPYDAPRRTSRR 263
           +RD   R   DRY   GP R +   YR R  PYD P R   R
Sbjct: 253 DRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGR 285

[Close]

BLAST of Spo10452.1 vs. ExPASy Swiss-Prot
Match: RZ1A_ARATH (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana GN=RZ1A PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.400e-35
Identity = 108/258 (41.86%), Postives = 145/258 (56.20%), Query Frame = 1


		  
Query: 7   YRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRAMEDAIR 66
           YR F+GGL W TS R L DAF +YG ++++ V++D+ +GR RGFGFITF +++AM++AI 
Sbjct: 7   YRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIA 66

Query: 67  SMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDECFKCGR 126
           +M+G +LDGR I+V+KA+P  G     D  G   R  G +  R     G    +CFKCG+
Sbjct: 67  AMNGMDLDGRTITVDKAQPHQGGAG-RDNDGDRGRDRGYDRDRSRPSGGRGGGDCFKCGK 126

Query: 127 AGHWARDCPS----NGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESRDV 186
            GH+AR+CPS    +GGGR+SS+ +  R   + DR Y    DR G       DR  ++D 
Sbjct: 127 PGHFARECPSESSRDGGGRFSSKDD--RYSSKDDR-YGAKDDRYGA----KEDRYGAKD- 186

Query: 187 YVSRDRYST--ERYPPAGDRFGS-DRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPT 246
               DRYS+  +RY    DR+GS D    RY       DR  ER GG R  D  + G P 
Sbjct: 187 ----DRYSSKDDRYSSKDDRYGSRDGGGSRYGP-----DRSGERAGG-RSRDGGSRGAP- 240

Query: 247 RYDKGSYRDRVHPYDAPR 258
               G  R    PYD PR
Sbjct: 247 ----GGERHSRAPYDRPR 240

[Close]

BLAST of Spo10452.1 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.500e-26
Identity = 78/170 (45.88%), Postives = 94/170 (55.29%), Query Frame = 1


		  
Query: 1   MAARD-GYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRR 60
           MAA D  YR FVGGL W TS   LE+AF  YG+I+DS V+ DRETGR RGFGF+TF+   
Sbjct: 1   MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60

Query: 61  AMEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSD 120
           +M DAI +M+G+ELDGR I+VN+A+ R G       YGG R  GG   Y GG R G    
Sbjct: 61  SMLDAIENMNGKELDGRNITVNQAQSR-GGGGGGGGYGGGRGGGG---YGGGRRDG---- 120

Query: 121 ECFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGG 170
                   G+        GGG Y  + E G  G  G   Y    +  GGG
Sbjct: 121 --------GY-------GGGGGYGGRREGGGGGYGGGGGYGGRREGGGGG 147

[Close]

BLAST of Spo10452.1 vs. ExPASy Swiss-Prot
Match: RBG7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=RBG7 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.100e-24
Identity = 78/171 (45.61%), Postives = 95/171 (55.56%), Query Frame = 1


		  
Query: 7   YRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRAMEDAIR 66
           YR FVGGL W T  R LE AF +YG +IDS ++ DRETGR RGFGF+TF D +AM+DAI 
Sbjct: 8   YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67

Query: 67  SMHGRELDGRVISVNKAEPR--MGAEDPYDAYGGDRRSGGRESYRGGERP----GERSDE 126
            M+G++LDGR I+VN+A+ R   G        GG  RSGG   Y GG       G R + 
Sbjct: 68  GMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGRRE- 127

Query: 127 CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRY 172
               G  G+      S GGG YSS+   G S   G R+    Y    GG Y
Sbjct: 128 ----GGGGY------SGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGY 167

[Close]

BLAST of Spo10452.1 vs. TAIR (Arabidopsis)
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 224.2 bits (570), Expect = 9.600e-59
Identity = 145/296 (48.99%), Postives = 186/296 (62.84%), Query Frame = 1


		  
Query: 1   MAARDGYRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRA 60
           MAA++G RIFVGGL    + R LE AF R+G I+D  +M++R+TGR RGFGFITFADRRA
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MEDAIRSMHGRELDGRVISVNKAEPRMGAEDPYDAYG--GDRRSG----GRESYRGGERP 120
           M+++IR MHGR+   RVISVN+AEP++G +D  +++G  G R SG    G+ S+ GG   
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDG-ESHGSRGGRDSGYSIAGKGSFGGGGGG 120

Query: 121 GER--SDECFKCGRAGHWARDCPSNGGGR------YSSQ-SEFGRSGLQGDR--DYDRHY 180
           G R   DECFKCGR GHWARDCPS GGGR      +SS+ S +G S  + DR  D DR+ 
Sbjct: 121 GGRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYV 180

Query: 181 DRA--------GGGRYDSRDRLESRDVYVSRDRYSTERYPPAGDRF-GSDRF---MDRYP 240
           DR         G  RY +RDR +SR+ Y+ RDRY+++RY    DRF G DR+    DRYP
Sbjct: 181 DRERYIDDRYDGAARYGARDRFDSREAYIPRDRYASDRYAAPADRFAGGDRYSRGSDRYP 240

Query: 241 QNGYVRDRDYERD-GGIRGGDRYA---AGGPTR---YDKGSYRDRV-HPYDAPRRT 260
              Y + R +ERD     G DRY    AGGP R    +   +R R   PY+ P R+
Sbjct: 241 PGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRS 295

[Close]

BLAST of Spo10452.1 vs. TAIR (Arabidopsis)
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 213.8 bits (543), Expect = 1.300e-55
Identity = 132/282 (46.81%), Postives = 159/282 (56.38%), Query Frame = 1


		  
Query: 8   RIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRAMEDAIRS 67
           RIFVGGL W+ ++R LE  F RYGKI +  +MV R+TGRPRGFGFITF DRR  +DAI+ 
Sbjct: 13  RIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIKH 72

Query: 68  MHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDECFKCGRA 127
           MHGREL  +VISVNKAEP++G ED         + GG  S RG        DECFKC R 
Sbjct: 73  MHGRELGNKVISVNKAEPKVGGEDV-----DQLKKGGGYSSRG----KGTEDECFKCRRP 132

Query: 128 GHWARDCPSNGGGRY----------------SSQSEFGRSGLQGDRDYDRHYDR------ 187
           GHWARDCPS G  R                   +  +G   L+ +R+ +R +DR      
Sbjct: 133 GHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFDRYMDGRR 192

Query: 188 -AGGGRYDSRDRLESRDVYVSRDRYSTERYPPAGDRFGSDRF--MDRYPQNGY-VRDRDY 247
              GGRY  RDR +S D Y  RD Y  ERY P GDRF SDR+   + + +N Y  R+R Y
Sbjct: 193 DRDGGRYSYRDRFDSGDKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLENEYRGRERSY 252

Query: 248 ERDGGIRG-GDRYAAGGPTRYDKGSYRDRVHPYDAPRRTSRR 263
           +RD   R   DRY   GP R +   YR R  PYD P R   R
Sbjct: 253 DRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGR 285

[Close]

BLAST of Spo10452.1 vs. TAIR (Arabidopsis)
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 151.4 bits (381), Expect = 7.900e-37
Identity = 108/258 (41.86%), Postives = 145/258 (56.20%), Query Frame = 1


		  
Query: 7   YRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRAMEDAIR 66
           YR F+GGL W TS R L DAF +YG ++++ V++D+ +GR RGFGFITF +++AM++AI 
Sbjct: 7   YRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIA 66

Query: 67  SMHGRELDGRVISVNKAEPRMGAEDPYDAYGGDRRSGGRESYRGGERPGERSDECFKCGR 126
           +M+G +LDGR I+V+KA+P  G     D  G   R  G +  R     G    +CFKCG+
Sbjct: 67  AMNGMDLDGRTITVDKAQPHQGGAG-RDNDGDRGRDRGYDRDRSRPSGGRGGGDCFKCGK 126

Query: 127 AGHWARDCPS----NGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRYDSRDRLESRDV 186
            GH+AR+CPS    +GGGR+SS+ +  R   + DR Y    DR G       DR  ++D 
Sbjct: 127 PGHFARECPSESSRDGGGRFSSKDD--RYSSKDDR-YGAKDDRYGA----KEDRYGAKD- 186

Query: 187 YVSRDRYST--ERYPPAGDRFGS-DRFMDRYPQNGYVRDRDYERDGGIRGGDRYAAGGPT 246
               DRYS+  +RY    DR+GS D    RY       DR  ER GG R  D  + G P 
Sbjct: 187 ----DRYSSKDDRYSSKDDRYGSRDGGGSRYGP-----DRSGERAGG-RSRDGGSRGAP- 240

Query: 247 RYDKGSYRDRVHPYDAPR 258
               G  R    PYD PR
Sbjct: 247 ----GGERHSRAPYDRPR 240

[Close]

BLAST of Spo10452.1 vs. TAIR (Arabidopsis)
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2)

HSP 1 Score: 115.2 bits (287), Expect = 6.300e-26
Identity = 78/171 (45.61%), Postives = 95/171 (55.56%), Query Frame = 1


		  
Query: 7   YRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRAMEDAIR 66
           YR FVGGL W T  R LE AF +YG +IDS ++ DRETGR RGFGF+TF D +AM+DAI 
Sbjct: 8   YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67

Query: 67  SMHGRELDGRVISVNKAEPR--MGAEDPYDAYGGDRRSGGRESYRGGERP----GERSDE 126
            M+G++LDGR I+VN+A+ R   G        GG  RSGG   Y GG       G R + 
Sbjct: 68  GMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGRRE- 127

Query: 127 CFKCGRAGHWARDCPSNGGGRYSSQSEFGRSGLQGDRDYDRHYDRAGGGRY 172
               G  G+      S GGG YSS+   G S   G R+    Y    GG Y
Sbjct: 128 ----GGGGY------SGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGY 167

[Close]

BLAST of Spo10452.1 vs. TAIR (Arabidopsis)
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1)

HSP 1 Score: 112.1 bits (279), Expect = 5.300e-25
Identity = 72/166 (43.37%), Postives = 90/166 (54.22%), Query Frame = 1


		  
Query: 7   YRIFVGGLGWNTSQRHLEDAFVRYGKIIDSLVMVDRETGRPRGFGFITFADRRAMEDAIR 66
           YR FVGGL W T+   L+  F ++G +IDS ++ DRE+GR RGFGF+TF D +AM DAI 
Sbjct: 6   YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE 65

Query: 67  SMHGRELDGRVISVNKAEPR--MGAEDPYDAYGGDRRSGGRESYRGGERPGERSDECFKC 126
            M+G+ELDGRVI+VN+A+ R   G        GG  RSGG   Y GG             
Sbjct: 66  EMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGG------------- 125

Query: 127 GRAGHWARDCPSNGGGRYSSQS-EFGRSGLQGDRDYDRHYDRAGGG 170
           G  G+        GGG Y  +S  +G  G  G R Y     R GGG
Sbjct: 126 GGGGY-----SGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGG 153

The following BLAST results are available for this feature:

BLAST of Spo10452.1 vs. NCBI nr
BLAST of Spo10452.1 vs. UniProtKB/TrEMBL
BLAST of Spo10452.1 vs. ExPASy Swiss-Prot
BLAST of Spo10452.1 vs. TAIR (Arabidopsis)

BLAST of Spo10452.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902195820\|gb\|KNA12961.1\|	1.3e-150	100.	hypothetical protein SOVF_1214...	[more]
gi\|731368707\|ref\|XP_010696295.1\|	2.3e-131	87.4	PREDICTED: glycine-rich RNA-bi...	[more]
gi\|720036055\|ref\|XP_010267222.1\|	1.3e-86	63.2	PREDICTED: glycine-rich RNA-bi...	[more]
gi\|694386285\|ref\|XP_009368935.1\|	7.8e-79	61.1	PREDICTED: glycine-rich RNA-bi...	[more]
gi\|657975437\|ref\|XP_008379568.1\|	1.0e-78	60.7	PREDICTED: glycine-rich RNA-bi...	[more]

BLAST of Spo10452.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R0B7_SPIOL	9.1e-151	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B731_BETVU	1.6e-131	87.4	Uncharacterized protein OS=Bet...	[more]
B9HL79_POPTR	3.5e-78	59.1	Uncharacterized protein OS=Pop...	[more]
A0A0A0LQB5_CUCSA	1.3e-77	59.5	Uncharacterized protein OS=Cuc...	[more]
B9HUL0_POPTR	1.3e-77	58.6	Glycine-rich RNA-binding famil...	[more]

BLAST of Spo10452.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RZ1C_ARATH	1.7e-57	48.9	Glycine-rich RNA-binding prote...	[more]
RZ1B_ARATH	2.3e-54	46.8	Glycine-rich RNA-binding prote...	[more]
RZ1A_ARATH	1.4e-35	41.8	Glycine-rich RNA-binding prote...	[more]
GRPA_MAIZE	3.5e-26	45.8	Glycine-rich RNA-binding, absc...	[more]
RBG7_ARATH	1.1e-24	45.6	Glycine-rich RNA-binding prote...	[more]

BLAST of Spo10452.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G04280.1	9.6e-59	48.9	RNA-binding (RRM/RBD/RNP motif...	[more]
AT1G60650.1	1.3e-55	46.8	RNA-binding (RRM/RBD/RNP motif...	[more]
AT3G26420.1	7.9e-37	41.8	RNA-binding (RRM/RBD/RNP motif...	[more]
AT2G21660.1	6.3e-26	45.6	cold, circadian rhythm, and rn...	[more]
AT4G39260.1	5.3e-25	43.3	cold, circadian rhythm, and RN...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..78 score: 2.4
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 score: 6.5
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 7..85 score: 19
IPR001878	Zinc finger, CCHC-type	GENE3D	4.10.60.10		coord: 117..140 score: 8.1
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 120..136 score: 4.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 120..136 score: 1.
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 121..136 score: 11
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 103..140 score: 3.53
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 4..101 score: 5.8
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 4..113 score: 7.19
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 4..94 score: 1.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008270	zinc ion binding