Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAATATTAATTAATCAAATTAATGGCTGAACAAGGGCTTGAGAAGCAGGAAGTTGCAGGTTACAATTCTTGTGTAGGAAGTAGGAAAAGTAATATGGTGATTGCGTTGCTTAGATCGGTGAGTCTTTTGGCGACATTGGTTGCTACTATTGTGATGTCTCTTAACAAAGAAACTAAAACCTTTGTGGTTGCTACTATTGGTACTAATTCTATCAAAGCCACACTTACCGCTAAGTTTCAAGACAACCCAGCAAACATGTGAGTTTTACTTTATTATACATACTTCCTCCGTTTTTTAATACTCGCAACGTTTGTTAGTTTCACGCATGCCAATGCACAACTTTGATCATTTGTATATTAAATTCTTTTTATGCAAAAATTATAAAAAGTTGATATTTTGAAAATATACATGGAGACGAATCTAACAAGATCCCACATTACTATATTTTATCTTATATAAAAAACACTAAGAATAGTCAAATTAGATTATATGAATAGTGGCAAAAGTCCAAACGTTACGAGTATTAAAAAACGGAGGAAGTATATATTTATGGTTACTAACTAATGAAGTATTGACCTAGTGGTTAAGATTGTATAATAAGTTTAGGTTCGAATCCCCACGCCCACAATTTGTTATTTATATTGCCAGCTATCGTGACTCATTTGCACCAAAATTAACAATATTTATTGCTAATGGATTGATCGAAATACTAATCATTCTTTTTGACCACTATATATATAGATTCTTTGTTTTGGCAAATGGATTGGCTACTTTGCACAACATGTTGGTGTTGGCCGCAATGTTGTTTGGAAAGAAGATTGATCCAAAAGGAATTCGGTTTATGGCTATCTCGGTTTTAGACATAGTAATCTTTCTTGCTTACCACAAATTATTAGGTACACCCGGTTGTATGTAGCTCTACATACAATCGGATCGTTTTGTATTTTCTAATCCTTTAAAAAAAGCACATTTTTCAGTTTAAAAGCACATTTTCAGTTTAAAAGCACATTTTTCAGTTTAAAATCACATTTTTCAGTTTAAAATCACATTTTCACAATTTTAATGCACATTTGTTTTTCAAATATTATGATATTGAATATCTTCTTCCAATTGACAAAAAAACTAAACTTAAAAGGTGAGCAACCAACATCAGTTTACATATCCTCTCAAATTCTTCGCGCTCGTATGTTCTTTTGTACTAACAATGTGTTATTTTGAAATGTATCTGCTTTTAAGCTATAAAAAAAATGTACTTTAACTTGTAAAAATGTGCTTTAAACTATAAAATTGTGCTTTTTGAGGGGTTACAAATCAAAACTACCCTGTTGCATGTAGAGCTACATACAACCGGGTGTACCATTTACCAATTGGTAGTAATATATAAAAGAAGATTAATTAGTTCTCTTTCTAATGAAAATATAATTGACATTATGTAACATGAAAAATGCAGACAAACTTAGCAATACTGTCAGCTGGAACAACTGGTGCTGCATTCATGGCACAACTAGCAAAGAATGGGAATTCACATGCACAATGGAACCAAATTTGTGATAAATTTGAGAGCTTTTGCAGTCATGGTGGTGGTGCTATTCTTGCTTCATACATAGGCCTTGCACTTTTTCTAATACTTGTTCTCATCTCTACTATCAAACGTCATCATTCTATTCAGAACAATACTCATGCTTCTGTTTAAGTATTACATTTATTACAAGCTTTACATTATGGTTTTTTTTTTTTTATTTTGATGTCATGATTATCCATGTATCCTTTCTACTTTTATGACTGATTTCAATTTAATCAATATTCATTGCTTATGTTGTCAACAATTTTATGTTTCATGTATAAACATGGCCTAGTTGAGCCCAACAAATATCATCTTTATTGTTTTGGCAATTTTAGATAACAGTTAGGCCCTTGGCACCAGAAAATGAGAATTGGTTACAATTTACAAGGTGTAATTTACAATAACTTTTATATAAGCGGGAAAAGGCGACATGTACACCTAGTGTATAAGATTCTCTTGTACACCACCATTAATTTGTTTACCCATCATCAAACCCACTAAAAAATGAGAATCAAAAACAATAAAAAAGCGATGTAATTTAGATAGTGACAATTTTAGACGTGGATCCTACTATATGTACACCTAGTGTACATGACATCTTGTACACCATGTTTTTCTATTGGTTGAAATGACATATTTATTGTTTTTCATTTTCATTTTTTAAGGTTCGCAACTTTGCCTTAAGAAAAAGCTAAATTAGCACTCCTACAAAATCTATGCACTTTTAGGTTGGGTTACACCATAAACAATATTAACCGGACATTCGGATCATAAAGCTAAATTAGGGGAAGATTCCAGGGTATGTGTATCATCATACCCTGGCTTTTGATTGGGCCATATCAGCAAAACAATTTTCATTTTTGGGGGGAATTGGGTTAAAACAAGGGGGGAAATTTTTGGCTGGGATTGCGCCATTCACTCTTGCTGAGCGGTAGTTTTTCCGCCCTAATTCCTGAAAAATGTTTTCCCGCTCAGCTCACCTCACATTTCTAAAAAAAAAATAAAAAAAATTAAAAAACAGGTATGAGCTTCAACATTTTTTGGCTGAGTCGCAACTTGTCTGGTTTTTGAAGACGAAGCTCAGGTAATTTTTTGAAGATGAAGACGAAGTGGTAGTTCGTAACTGACATTTTCATTGAAGACTAAGCTCAGGTAATTTTTTCAACCAAGTTTAGGGTTTTATCTTTTTAATGTAAATCTTGAAAATATTTTGATGAAATTATGATTTTGTGATACATACTGAATGCATGTTAACTGCTGCGTAGTAAAAATCAGATATGAGTTCGTGAATTTTGGGCGGATATTACGAAGTTGTTTTATTATTTTAGGGTTTATAGTTACGTAGTATTAAAACTTGTAGTACGTATTTTATTGAAAAACCAGTGAAAAAATTTTTAGTTAATAATTAATGCGTTTCATTATATAAAAAAACATGTCATTATATTAATGTAAAACTTACTGTTATAGTAATAAATATATTTCGTTATATTAAATTAAATGTTAAATGCATCACGTTTTTAATAATGTTCTGTTAAATATTACAGTGCTATACACTAGAGCCATGGAAGGACTAGACCTTAATGAAACTGTAACAATTGAAGATTGTATTGAGGATACTGGTGCAACTGATAAGAACTCCAATCCCCCTACCGAAGGCATGTGCTTTTTAACGGGTCAAGAATTTTTCGATTTTTGTAATATGTATGCGTTTAAGGAAGGTTTTGAGATGTTTATGAAAAGTAATACTTTGAAACAAGAGTATAAGGCTATTGGAGTGAATAGGAAAGGTGTTGGAGAGCTTGAGCCAAAGCCTCATTAG GAAATATTAATTAATCAAATTAATGGCTGAACAAGGGCTTGAGAAGCAGGAAGTTGCAGGTTACAATTCTTGTGTAGGAAGTAGGAAAAGTAATATGGTGATTGCGTTGCTTAGATCGGTGAGTCTTTTGGCGACATTGGTTGCTACTATTGTGATGTCTCTTAACAAAGAAACTAAAACCTTTGTGGTTGCTACTATTGGTACTAATTCTATCAAAGCCACACTTACCGCTAAGTTTCAAGACAACCCAGCAAACATATTCTTTGTTTTGGCAAATGGATTGGCTACTTTGCACAACATGTTGGTGTTGGCCGCAATGTTGTTTGGAAAGAAGATTGATCCAAAAGGAATTCGGTTTATGGCTATCTCGGTTTTAGACATAACAAACTTAGCAATACTGTCAGCTGGAACAACTGGTGCTGCATTCATGGCACAACTAGCAAAGAATGGGAATTCACATGCACAATGGAACCAAATTTGTGATAAATTTGAGAGCTTTTGCAGTCATGGTGGTGGTGCTATTCTTGCTTCATACATAGGCCTTGCACTTTTTCTAATACTTGTTCTCATCTCTACTATCAAACTGCTATACACTAGAGCCATGGAAGGACTAGACCTTAATGAAACTGTAACAATTGAAGATTGTATTGAGGATACTGGTGCAACTGATAAGAACTCCAATCCCCCTACCGAAGGCATGTGCTTTTTAACGGGTCAAGAATTTTTCGATTTTTGTAATATGTATGCGTTTAAGGAAGGTTTTGAGATGTTTATGAAAAGTAATACTTTGAAACAAGAGTATAAGGCTATTGGAGTGAATAGGAAAGGTGTTGGAGAGCTTGAGCCAAAGCCTCATTAG ATGGCTGAACAAGGGCTTGAGAAGCAGGAAGTTGCAGGTTACAATTCTTGTGTAGGAAGTAGGAAAAGTAATATGGTGATTGCGTTGCTTAGATCGGTGAGTCTTTTGGCGACATTGGTTGCTACTATTGTGATGTCTCTTAACAAAGAAACTAAAACCTTTGTGGTTGCTACTATTGGTACTAATTCTATCAAAGCCACACTTACCGCTAAGTTTCAAGACAACCCAGCAAACATATTCTTTGTTTTGGCAAATGGATTGGCTACTTTGCACAACATGTTGGTGTTGGCCGCAATGTTGTTTGGAAAGAAGATTGATCCAAAAGGAATTCGGTTTATGGCTATCTCGGTTTTAGACATAACAAACTTAGCAATACTGTCAGCTGGAACAACTGGTGCTGCATTCATGGCACAACTAGCAAAGAATGGGAATTCACATGCACAATGGAACCAAATTTGTGATAAATTTGAGAGCTTTTGCAGTCATGGTGGTGGTGCTATTCTTGCTTCATACATAGGCCTTGCACTTTTTCTAATACTTGTTCTCATCTCTACTATCAAACTGCTATACACTAGAGCCATGGAAGGACTAGACCTTAATGAAACTGTAACAATTGAAGATTGTATTGAGGATACTGGTGCAACTGATAAGAACTCCAATCCCCCTACCGAAGGCATGTGCTTTTTAACGGGTCAAGAATTTTTCGATTTTTGTAATATGTATGCGTTTAAGGAAGGTTTTGAGATGTTTATGAAAAGTAATACTTTGAAACAAGAGTATAAGGCTATTGGAGTGAATAGGAAAGGTGTTGGAGAGCTTGAGCCAAAGCCTCATTAG MAEQGLEKQEVAGYNSCVGSRKSNMVIALLRSVSLLATLVATIVMSLNKETKTFVVATIGTNSIKATLTAKFQDNPANIFFVLANGLATLHNMLVLAAMLFGKKIDPKGIRFMAISVLDITNLAILSAGTTGAAFMAQLAKNGNSHAQWNQICDKFESFCSHGGGAILASYIGLALFLILVLISTIKLLYTRAMEGLDLNETVTIEDCIEDTGATDKNSNPPTEGMCFLTGQEFFDFCNMYAFKEGFEMFMKSNTLKQEYKAIGVNRKGVGELEPKPH Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo16497.1 vs. NCBI nr
Match: gi|870861876|gb|KMT13135.1| (hypothetical protein BVRB_4g086770 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 259.6 bits (662), Expect = 6.200e-66 Identity = 138/189 (73.02%), Postives = 163/189 (86.24%), Query Frame = 1
BLAST of Spo16497.1 vs. NCBI nr
Match: gi|731329239|ref|XP_010675484.1| (PREDICTED: CASP-like protein 1B2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 259.6 bits (662), Expect = 6.200e-66 Identity = 138/189 (73.02%), Postives = 163/189 (86.24%), Query Frame = 1
BLAST of Spo16497.1 vs. NCBI nr
Match: gi|731376674|ref|XP_010667641.1| (PREDICTED: CASP-like protein 1B2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 253.4 bits (646), Expect = 4.400e-64 Identity = 129/163 (79.14%), Postives = 151/163 (92.64%), Query Frame = 1
BLAST of Spo16497.1 vs. NCBI nr
Match: gi|470115055|ref|XP_004293719.1| (PREDICTED: CASP-like protein 1B1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 200.3 bits (508), Expect = 4.500e-48 Identity = 103/187 (55.08%), Postives = 139/187 (74.33%), Query Frame = 1
BLAST of Spo16497.1 vs. NCBI nr
Match: gi|255578023|ref|XP_002529882.1| (PREDICTED: CASP-like protein 1B1 [Ricinus communis]) HSP 1 Score: 200.3 bits (508), Expect = 4.500e-48 Identity = 103/189 (54.50%), Postives = 140/189 (74.07%), Query Frame = 1
BLAST of Spo16497.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CHE0_BETVU (CASP-like protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g086770 PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 4.300e-66 Identity = 138/189 (73.02%), Postives = 163/189 (86.24%), Query Frame = 1
BLAST of Spo16497.1 vs. UniProtKB/TrEMBL
Match: M5WQ67_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa025143mg PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 3.400e-47 Identity = 97/190 (51.05%), Postives = 141/190 (74.21%), Query Frame = 1
BLAST of Spo16497.1 vs. UniProtKB/TrEMBL
Match: A0A067GCX8_CITSI (CASP-like protein OS=Citrus sinensis GN=CISIN_1g029003mg PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 7.600e-47 Identity = 96/174 (55.17%), Postives = 135/174 (77.59%), Query Frame = 1
BLAST of Spo16497.1 vs. UniProtKB/TrEMBL
Match: V4W7B6_9ROSI (CASP-like protein OS=Citrus clementina GN=CICLE_v10016765mg PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.000e-46 Identity = 95/174 (54.60%), Postives = 135/174 (77.59%), Query Frame = 1
BLAST of Spo16497.1 vs. UniProtKB/TrEMBL
Match: A0A061G805_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_026949 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.200e-45 Identity = 98/191 (51.31%), Postives = 139/191 (72.77%), Query Frame = 1
BLAST of Spo16497.1 vs. ExPASy Swiss-Prot
Match: CSPLC_RICCO (CASP-like protein 1B1 OS=Ricinus communis GN=RCOM_0770240 PE=2 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.800e-50 Identity = 103/189 (54.50%), Postives = 140/189 (74.07%), Query Frame = 1
BLAST of Spo16497.1 vs. ExPASy Swiss-Prot
Match: CSPL5_POPTR (CASP-like protein 1B2 OS=Populus trichocarpa GN=POPTRDRAFT_798217 PE=3 SV=3) HSP 1 Score: 197.6 bits (501), Expect = 1.800e-49 Identity = 105/189 (55.56%), Postives = 144/189 (76.19%), Query Frame = 1
BLAST of Spo16497.1 vs. ExPASy Swiss-Prot
Match: CSPL1_VITVI (CASP-like protein 1B2 OS=Vitis vinifera GN=VIT_10s0092g00220 PE=2 SV=2) HSP 1 Score: 189.1 bits (479), Expect = 6.400e-47 Identity = 101/191 (52.88%), Postives = 140/191 (73.30%), Query Frame = 1
BLAST of Spo16497.1 vs. ExPASy Swiss-Prot
Match: CSPLB_POPTR (CASP-like protein 1B1 OS=Populus trichocarpa GN=POPTRDRAFT_823125 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 7.900e-45 Identity = 97/191 (50.79%), Postives = 136/191 (71.20%), Query Frame = 1
BLAST of Spo16497.1 vs. ExPASy Swiss-Prot
Match: CSPLC_ARALL (CASP-like protein 1B2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492822 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 4.300e-43 Identity = 92/183 (50.27%), Postives = 132/183 (72.13%), Query Frame = 1
BLAST of Spo16497.1 vs. TAIR (Arabidopsis)
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 173.7 bits (439), Expect = 1.600e-43 Identity = 91/183 (49.73%), Postives = 131/183 (71.58%), Query Frame = 1
BLAST of Spo16497.1 vs. TAIR (Arabidopsis)
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 158.7 bits (400), Expect = 5.200e-39 Identity = 78/170 (45.88%), Postives = 120/170 (70.59%), Query Frame = 1
BLAST of Spo16497.1 vs. TAIR (Arabidopsis)
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 75.5 bits (184), Expect = 5.800e-14 Identity = 55/170 (32.35%), Postives = 91/170 (53.53%), Query Frame = 1
BLAST of Spo16497.1 vs. TAIR (Arabidopsis)
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 66.6 bits (161), Expect = 2.700e-11 Identity = 49/170 (28.82%), Postives = 89/170 (52.35%), Query Frame = 1
BLAST of Spo16497.1 vs. TAIR (Arabidopsis)
Match: AT1G14160.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 60.8 bits (146), Expect = 1.500e-9 Identity = 51/201 (25.37%), Postives = 91/201 (45.27%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16497.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16497.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16497.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo16497.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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