Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCTTACTCTGCATTTTCGTCCTCCTTAAAATGCGAATTAAACATAATTGGTGTTAAAAATGTACAAACAAAGCACAAAGGTAATCTCTTCATCAGGTGCTACCTTTGTGCAGGAAGCAACAACAGGAGAATCCAGGTAAACACGAAGGAAATCGCTTCTTCTTCGTCGTCTTCTCGAAAAAACGATGGCTATATATTTTGGGATGATACTTTTTCTCTAGAGTGTAACGGTACTTCAGAGGATTCAGTCCATGGTTTAAAGGAAGAACTGGTGGTTTTCGAGCTGAGGTGGCGAAATACAAAGTCTTTCCTTGGTGGGTCTCAACTAATAGCAACAGCTGAGATGCCATGGAAGAACGCCTTTGAAGCGCCGAAAATGGAATTTCAGAGGTGGGTTGTTATGACTATGAATAAACAAGGGAATAAGTTGGTTAAGGTTGAGGATGGGGTTAAACCACCAGCGTTGCAGATAACAATGAAGGTTGAAGTTGTTCCGGCAACCGCGACGAGGGTGGTTTCCGGGGAAGAGATGAGGAAGAGGAGGAGAAGTGAAAGGTTGAAGGGGTTGGATGAGTGTGGCTGCAAATCAAATGGAGGGTGTTACTGCTCTTCTTGTGTTGATACTGAGATGCTTTTTATTGGTTTAGCTTTTGATGCCTGTTAA ATGGCTTCTTCTTACTCTGCATTTTCGTCCTCCTTAAAATGCGAATTAAACATAATTGGTGTTAAAAATGTACAAACAAAGCACAAAGGTAATCTCTTCATCAGGTGCTACCTTTGTGCAGGAAGCAACAACAGGAGAATCCAGGTAAACACGAAGGAAATCGCTTCTTCTTCGTCGTCTTCTCGAAAAAACGATGGCTATATATTTTGGGATGATACTTTTTCTCTAGAGTGTAACGGTACTTCAGAGGATTCAGTCCATGGTTTAAAGGAAGAACTGGTGGTTTTCGAGCTGAGGTGGCGAAATACAAAGTCTTTCCTTGGTGGGTCTCAACTAATAGCAACAGCTGAGATGCCATGGAAGAACGCCTTTGAAGCGCCGAAAATGGAATTTCAGAGGTGGGTTGTTATGACTATGAATAAACAAGGGAATAAGTTGGTTAAGGTTGAGGATGGGGTTAAACCACCAGCGTTGCAGATAACAATGAAGGTTGAAGTTGTTCCGGCAACCGCGACGAGGGTGGTTTCCGGGGAAGAGATGAGGAAGAGGAGGAGAAGTGAAAGGTTGAAGGGGTTGGATGAGTGTGGCTGCAAATCAAATGGAGGGTGTTACTGCTCTTCTTGTGTTGATACTGAGATGCTTTTTATTGGTTTAGCTTTTGATGCCTGTTAA ATGGCTTCTTCTTACTCTGCATTTTCGTCCTCCTTAAAATGCGAATTAAACATAATTGGTGTTAAAAATGTACAAACAAAGCACAAAGGTAATCTCTTCATCAGGTGCTACCTTTGTGCAGGAAGCAACAACAGGAGAATCCAGGTAAACACGAAGGAAATCGCTTCTTCTTCGTCGTCTTCTCGAAAAAACGATGGCTATATATTTTGGGATGATACTTTTTCTCTAGAGTGTAACGGTACTTCAGAGGATTCAGTCCATGGTTTAAAGGAAGAACTGGTGGTTTTCGAGCTGAGGTGGCGAAATACAAAGTCTTTCCTTGGTGGGTCTCAACTAATAGCAACAGCTGAGATGCCATGGAAGAACGCCTTTGAAGCGCCGAAAATGGAATTTCAGAGGTGGGTTGTTATGACTATGAATAAACAAGGGAATAAGTTGGTTAAGGTTGAGGATGGGGTTAAACCACCAGCGTTGCAGATAACAATGAAGGTTGAAGTTGTTCCGGCAACCGCGACGAGGGTGGTTTCCGGGGAAGAGATGAGGAAGAGGAGGAGAAGTGAAAGGTTGAAGGGGTTGGATGAGTGTGGCTGCAAATCAAATGGAGGGTGTTACTGCTCTTCTTGTGTTGATACTGAGATGCTTTTTATTGGTTTAGCTTTTGATGCCTGTTAA MASSYSAFSSSLKCELNIIGVKNVQTKHKGNLFIRCYLCAGSNNRRIQVNTKEIASSSSSSRKNDGYIFWDDTFSLECNGTSEDSVHGLKEELVVFELRWRNTKSFLGGSQLIATAEMPWKNAFEAPKMEFQRWVVMTMNKQGNKLVKVEDGVKPPALQITMKVEVVPATATRVVSGEEMRKRRRSERLKGLDECGCKSNGGCYCSSCVDTEMLFIGLAFDAC Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo06732.1 vs. NCBI nr
Match: gi|902225028|gb|KNA19942.1| (hypothetical protein SOVF_056830 [Spinacia oleracea]) HSP 1 Score: 450.7 bits (1158), Expect = 1.500e-123 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1
BLAST of Spo06732.1 vs. NCBI nr
Match: gi|731338886|ref|XP_010680557.1| (PREDICTED: uncharacterized protein LOC104895684 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 289.7 bits (740), Expect = 4.500e-75 Identity = 152/223 (68.16%), Postives = 180/223 (80.72%), Query Frame = 1
BLAST of Spo06732.1 vs. NCBI nr
Match: gi|870857234|gb|KMT08794.1| (hypothetical protein BVRB_6g135180 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 284.6 bits (727), Expect = 1.400e-73 Identity = 148/211 (70.14%), Postives = 172/211 (81.52%), Query Frame = 1
BLAST of Spo06732.1 vs. NCBI nr
Match: gi|224096183|ref|XP_002310566.1| (hypothetical protein POPTR_0007s05510g [Populus trichocarpa]) HSP 1 Score: 171.8 bits (434), Expect = 1.400e-39 Identity = 96/197 (48.73%), Postives = 133/197 (67.51%), Query Frame = 1
BLAST of Spo06732.1 vs. NCBI nr
Match: gi|743826387|ref|XP_011022787.1| (PREDICTED: uncharacterized protein LOC105124459 [Populus euphratica]) HSP 1 Score: 170.6 bits (431), Expect = 3.000e-39 Identity = 96/197 (48.73%), Postives = 132/197 (67.01%), Query Frame = 1
BLAST of Spo06732.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RM64_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_056830 PE=4 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 1.100e-123 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1
BLAST of Spo06732.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C950_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g135180 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.000e-73 Identity = 148/211 (70.14%), Postives = 172/211 (81.52%), Query Frame = 1
BLAST of Spo06732.1 vs. UniProtKB/TrEMBL
Match: B9HFH0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s05510g PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 9.500e-40 Identity = 96/197 (48.73%), Postives = 133/197 (67.51%), Query Frame = 1
BLAST of Spo06732.1 vs. UniProtKB/TrEMBL
Match: B9SZ33_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0212500 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.100e-39 Identity = 98/217 (45.16%), Postives = 134/217 (61.75%), Query Frame = 1
BLAST of Spo06732.1 vs. UniProtKB/TrEMBL
Match: A0A061DQB5_THECC (Nitric oxide synthase-interacting protein, putative OS=Theobroma cacao GN=TCM_001124 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.100e-39 Identity = 105/223 (47.09%), Postives = 144/223 (64.57%), Query Frame = 1
BLAST of Spo06732.1 vs. TAIR (Arabidopsis)
Match: AT5G65030.1 (unknown protein) HSP 1 Score: 109.0 bits (271), Expect = 3.800e-24 Identity = 76/215 (35.35%), Postives = 115/215 (53.49%), Query Frame = 1
BLAST of Spo06732.1 vs. TAIR (Arabidopsis)
Match: AT5G10210.1 (C2 calcium-dependent membrane targeting (InterPro:IPR000008)) HSP 1 Score: 98.2 bits (243), Expect = 6.700e-21 Identity = 76/213 (35.68%), Postives = 112/213 (52.58%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06732.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06732.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06732.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo06732.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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