Spo04012.1 (mRNA) | SpinachBase

Overview


Name	Spo04012.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Dbj\|BAA90342.1
Location	chr6 : 6690988 .. 6694446 (-)
Sequence length	1135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCTAGCTCCTCCCCTCTTCCGAATTTCGAATCATATTTACTGTGTACACGATCAGACTATTCACACCGTGGCACCGTCCCCCACTCCTCTCTCTCATATCGCCACCGTGCTCCGCCATGTGCCACCAAAATTAACCACCATTTTAAACTTCCATTAAAATCTTAGAGAAAATTAGGGTTTCGCAAGAAAAATGGCCAAGAATTCCTCAAATCCGAAAGTTGTGACTTCAATCACATGTCCACACTGTGCTGGTCCTCTCTCAAAAGAAATGGTAAGTAAACGGAAAACAAAAATTCAACCATTTTGGCCTCAATTTCTCAGTAATCCTCGAATAAAATCGAAATCGTTGAATATTTTTTTTTGATTTATTGTTGTTGTCAATAATGTAATCGCAGGAAACTAGTCGTTGGACTGTGGCGCCGCTCGTCAGAGACAGCTTTTCAATGGTATATAGAATTCTGATTTTAAAGTTAATATTTGTTAGTTTTATGATTATAATTCAGCTTAAGTTAAAATTTCTAATTCCTGCATAAATGTGTGAATGATTGCAGATTGGTTCTGCTGTTGGTGGCACCACAAGTGCATTCTATGCGTTCAATTATGGTAAATACCTTAGTGTTTAGTTTAATTTCCAGTTAATGACGATATTAGAATTTAGAAATGTCAGGAAAGCTCCAGCTTTTTTGTTTGAGCATAATTGGAGTTTCAATAAAAGAATTTCTGCTGCGAGATGCTTAGAGTGTCCGTCTTTTGTGCAGTAATGCCGACTGTTTATAAATGGGTTAAAGGGCCAATGTGGCTGCATTTTCTAATCGGAGTAAGTCTACTTGACTCTATAAGAATGATAACTAGATGCTGCATTCTGTTTTATCTGGCCGCTTTTCGAGAGAGTTAGGCTATGTTTGGTTCAACTAAATTTGACTGAAATTAACTTATCTGAATTTAGTTTTGCTGAAAAAAACTTACTTGTGTGAAATTGTCTGCTTATTTTTTTGTTGAAAAGAACTTATTTGTGCATAGAATGTCTGCTTGTTTTGGCTGAACCTATCTAAACTGAACTTATTTTAACTTATCTGAACTTACTTGAACTTCTTTTTGCTGAAATAAATCAAAATAAGTTAAAATAAGTTGAAATAAACAAACCCTTAGTGTTGTAGTGATGTAGATAAATATAGATAAAGTTTTTGCAACCAAATGCTCAACTACGGAAATCAACATCAGAGCGAAATAACCTCAACAGGCACACCTTTAAGGAAGGTTTTTCACTTTCCAGCCTAAACTACATCGTATTCTAGGCTAGAGTAGGCGAGTGCGCGAGTAGCAACCTTAGAAGCCAAAAGAGAGGGCAAATCAAATCCGATGATAAAATTGAAGACTTTTTCATTTCCCTCCATCTAACTTCAGTTGTTAACACAAAAAGATGGTTGGATGGTAAGCAATGGATTGTAGTTTTCAAGTGTATTGACTTACCATATATGGGATAGACTAGACACAAAATGTTCGGACTCGAATAAGAATCCTGATTTGGTTATGGATCTGAGGGTCAGACACAAAAAATTCTAAAAGCAAGACCTGATTTTTGTGTTATGTGGGAATATTAGAACTGTTCCGGGAGGCTCTTGGCTGATCTGATGTAAAACTTCAGCTCCAAGTCTCCAACCACTCTTTTCTGATTCACTAGTATGAGACTGGATACGGGTTCACAATTCGCTACTTAATTTGCTAAATTAGACCAAAAACGTACAATTTCCTGTATTCGCCTTTTCAATTCGCGGTTGTAAACTTGTAATTAGAGAATTAGGTAACACTGGTTCCAACCTTTATTAGGAATTTACTACTCCTTTTTGTAAGTCGTGAAAACATTATCCATGCGAAGTTGGTTTAAAACTTGCATGTATGTTAGATACTTTGATGACTCGAAGGCCCTTATGAGTTATGACAATTGCATTTTTCTGAACTCTGTTAACAAGTCCAGCCCTTAGATAACAGTATTTTTTTTTCGGTTTCTTGCCTGCCTTGTGACAACTATGTATGAAATTTGATGCTATGTTTCTGTTCATCTGTTTAACTTGGAGCCTCCTTTGGGATGTTTATGTTTGAATACTCTGATTTTATTCAGGCACCACCGGTCATAGTTTTCTCATCAGCTTGTGCTGGGCTGGCAGGTATGACCCCTCTCTCTCACTTTCTCAAACACACAGACACACACACACACACACACAGACACACACACAAACAGACACAGACACATACACACAGACACACACACACACGCGCGCGCAGAGGCATACATAAATGTCACACCCACGCTGAACACATAAGTCATCAAATTTTGCAGTTAATTGGTATTAATTTGCATCAACACCTGAGTCTTTCAGGTAGCAGGGATGATTATTCCTATTTTCTAATTATCATGGATGTCTGTTCTGAACATAAGTATTGCAAATTTTATATTTGCAGCTGTTGTTGGCATTGATGAATATTGATTCTGCTTGCTGTACGTCTAGTATGTATGGGAAGCGTTTTTTCCCGAGCTCCTTAGGCTGTTAATTTTCAAGAAACCTCCGGCAGTTGCTTGTTCATTTCAAGGTTGAGGGCCCCCGAGGCACATAAAACAATCTGTAAAAGAAAACTGCTATATTTTTCTTTTACATCTAATATTAGAAAACAATAAGAATGATAGGCCATGTGGGGATGGGACCATCAGACAGGATTTGAACTTTTTAATTTGCAGCTACTCCACTCGTCCTAGTTTTAATTGTACCTTGTTCTTGGTCTTCATTTTTGATTTTTTACATTCCAGGTGGTGCAGTTCCAGCGGTGGCTCAGCTTGTGTCTTCATCGTATCATGCTGTGATGTTATCTTCATCACAGGCTCCTCAGGATGAAAAGAGTCACAAATCTGGGACTTCTTCAACATAGAGATATACAGCCTGTTGACGGAAAAGAATTCCATTTGTGCTAGCACAAGTGACCTCTTCAGTGTGTTCAGGATCCTGCTTTGGGCCTATCTCTGAGGTGATGCTCATTTTATATAGAGTATTTCCTCTATCGTGTTTTGGCATTTTCACTGTTCTCTGTTGTGTTCCCGTGCAGTAATCTTGAGCCACCTTTCTTACATCATGTTTATACATATCATGATATAAGAAAGCATGCCGAGGACATATGTAGGGGATGTTTCTCCTTTTGTAATTCGCTTGTCAAAATTCACCAGGGGATTCTGGTAGATATTTATTGAATCCTGTACCCAATATTTATGAGGGTTTAACCCGTGTAGTTCGTCAAAGAGGCTGTAATGGAAAGCACTTGGTTTTTACCTCTTCTGTTTACTGGAAAAAATTCTTGTAATATAGTACTCCGTACATGTTTTGGATTTTGAATGTCATAGGTATTCGATTCACTGAATTTAGGGATCAGCTAATTCTCAGCACTTCATCTTTAGTACAGTAATTCAAC

mRNA sequence

AAATCTAGCTCCTCCCCTCTTCCGAATTTCGAATCATATTTACTGTGTACACGATCAGACTATTCACACCGTGGCACCGTCCCCCACTCCTCTCTCTCATATCGCCACCGTGCTCCGCCATGTGCCACCAAAATTAACCACCATTTTAAACTTCCATTAAAATCTTAGAGAAAATTAGGGTTTCGCAAGAAAAATGGCCAAGAATTCCTCAAATCCGAAAGTTGTGACTTCAATCACATGTCCACACTGTGCTGGTCCTCTCTCAAAAGAAATGGAAACTAGTCGTTGGACTGTGGCGCCGCTCGTCAGAGACAGCTTTTCAATGATTGGTTCTGCTGTTGGTGGCACCACAAGTGCATTCTATGCGTTCAATTATGTAATGCCGACTGTTTATAAATGGGTTAAAGGGCCAATGTGGCTGCATTTTCTAATCGGAGCACCACCGGTCATAGTTTTCTCATCAGCTTGTGCTGGGCTGGCAGGTGGTGCAGTTCCAGCGGTGGCTCAGCTTGTGTCTTCATCGTATCATGCTGTGATGTTATCTTCATCACAGGCTCCTCAGGATGAAAAGAGTCACAAATCTGGGACTTCTTCAACATAGAGATATACAGCCTGTTGACGGAAAAGAATTCCATTTGTGCTAGCACAAGTGACCTCTTCAGTGTGTTCAGGATCCTGCTTTGGGCCTATCTCTGAGGTGATGCTCATTTTATATAGAGTATTTCCTCTATCGTGTTTTGGCATTTTCACTGTTCTCTGTTGTGTTCCCGTGCAGTAATCTTGAGCCACCTTTCTTACATCATGTTTATACATATCATGATATAAGAAAGCATGCCGAGGACATATGTAGGGGATGTTTCTCCTTTTGTAATTCGCTTGTCAAAATTCACCAGGGGATTCTGGTAGATATTTATTGAATCCTGTACCCAATATTTATGAGGGTTTAACCCGTGTAGTTCGTCAAAGAGGCTGTAATGGAAAGCACTTGGTTTTTACCTCTTCTGTTTACTGGAAAAAATTCTTGTAATATAGTACTCCGTACATGTTTTGGATTTTGAATGTCATAGGTATTCGATTCACTGAATTTAGGGATCAGCTAATTCTCAGCACTTCATCTTTAGTACAGTAATTCAAC

Coding sequence (CDS)

ATGGCCAAGAATTCCTCAAATCCGAAAGTTGTGACTTCAATCACATGTCCACACTGTGCTGGTCCTCTCTCAAAAGAAATGGAAACTAGTCGTTGGACTGTGGCGCCGCTCGTCAGAGACAGCTTTTCAATGATTGGTTCTGCTGTTGGTGGCACCACAAGTGCATTCTATGCGTTCAATTATGTAATGCCGACTGTTTATAAATGGGTTAAAGGGCCAATGTGGCTGCATTTTCTAATCGGAGCACCACCGGTCATAGTTTTCTCATCAGCTTGTGCTGGGCTGGCAGGTGGTGCAGTTCCAGCGGTGGCTCAGCTTGTGTCTTCATCGTATCATGCTGTGATGTTATCTTCATCACAGGCTCCTCAGGATGAAAAGAGTCACAAATCTGGGACTTCTTCAACATAG

Protein sequence

MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAPQDEKSHKSGTSST

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo04012	Spo04012	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo04012.1	Spo04012.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04012.1.utr5p.1	Spo04012.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04012.1.CDS.6	Spo04012.1.CDS.6	CDS
Spo04012.1.CDS.5	Spo04012.1.CDS.5	CDS
Spo04012.1.CDS.4	Spo04012.1.CDS.4	CDS
Spo04012.1.CDS.3	Spo04012.1.CDS.3	CDS
Spo04012.1.CDS.2	Spo04012.1.CDS.2	CDS
Spo04012.1.CDS.1	Spo04012.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04012.1.utr3p.1	Spo04012.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04012.1.exon.6	Spo04012.1.exon.6	exon
Spo04012.1.exon.5	Spo04012.1.exon.5	exon
Spo04012.1.exon.4	Spo04012.1.exon.4	exon
Spo04012.1.exon.3	Spo04012.1.exon.3	exon
Spo04012.1.exon.2	Spo04012.1.exon.2	exon
Spo04012.1.exon.1	Spo04012.1.exon.1	exon

Homology

[Close]

BLAST of Spo04012.1 vs. NCBI nr
Match: gi|902236597|gb|KNA24451.1| (hypothetical protein SOVF_015700 [Spinacia oleracea])

HSP 1 Score: 266.2 bits (679), Expect = 3.200e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1

		  
Query: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60
           MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN
Sbjct: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60

Query: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120
           YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ
Sbjct: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120

Query: 121 APQDEKSHKSGTSST 136
           APQDEKSHKSGTSST
Sbjct: 121 APQDEKSHKSGTSST 135

[Close]

BLAST of Spo04012.1 vs. NCBI nr
Match: gi|731344706|ref|XP_010683563.1| (PREDICTED: uncharacterized protein LOC104898215 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 224.9 bits (572), Expect = 8.200e-56
Identity = 117/136 (86.03%), Postives = 124/136 (91.18%), Query Frame = 1

		  
Query: 1   MAKNSSNPKVVT-SITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAF 60
           MAKNSSN K+VT  +TCPHCAGPLSK+METSRWTV PLVRDSFSMIGSAVGGTTSAFYAF
Sbjct: 1   MAKNSSNSKIVTVPLTCPHCAGPLSKQMETSRWTVPPLVRDSFSMIGSAVGGTTSAFYAF 60

Query: 61  NYVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSS 120
           NYVMPTV K+V GPMWLHFLIGAPPVIV SSACAGLAGGAVPA+AQL SSSYHA MLSSS
Sbjct: 61  NYVMPTVRKFVIGPMWLHFLIGAPPVIVLSSACAGLAGGAVPALAQLASSSYHAAMLSSS 120

Query: 121 QAPQDEKSHKSGTSST 136
            + QD+KSHKS TSST
Sbjct: 121 HSSQDDKSHKSRTSST 136

[Close]

BLAST of Spo04012.1 vs. NCBI nr
Match: gi|902170450|gb|KNA07840.1| (hypothetical protein SOVF_168130 [Spinacia oleracea])

HSP 1 Score: 218.4 bits (555), Expect = 7.700e-54
Identity = 110/135 (81.48%), Postives = 121/135 (89.63%), Query Frame = 1

		  
Query: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60
           MAK S+N KVVT + CP+CAGPLSKEMETSRWTV P +RDSFSMIGSAVGGTTSAFYAFN
Sbjct: 1   MAKTSTNLKVVTPLPCPNCAGPLSKEMETSRWTVQPFIRDSFSMIGSAVGGTTSAFYAFN 60

Query: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120
           YV+PTV KWV GPMWLHFLIGAPPVIVFSSACAGLAGGAVPA+AQL SSSYHA MLSSS 
Sbjct: 61  YVIPTVRKWVIGPMWLHFLIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAMLSSSH 120

Query: 121 APQDEKSHKSGTSST 136
           + Q++ +HKS TS+T
Sbjct: 121 SSQNDNTHKSRTSTT 135

[Close]

BLAST of Spo04012.1 vs. NCBI nr
Match: gi|698524559|ref|XP_009759086.1| (PREDICTED: uncharacterized protein LOC104211689 [Nicotiana sylvestris])

HSP 1 Score: 200.3 bits (508), Expect = 2.200e-48
Identity = 102/136 (75.00%), Postives = 114/136 (83.82%), Query Frame = 1

		  
Query: 3   KNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYV 62
           K++S     +++ CPHCAGPLSKEMETS+WTV PL+RDSFSMIGSAVGGTTSAFY FN+V
Sbjct: 12  KDNSGSSSSSNMRCPHCAGPLSKEMETSQWTVPPLIRDSFSMIGSAVGGTTSAFYGFNHV 71

Query: 63  MPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAP 122
           MP V +W+KGPMWLHFL+GAPPVIVFSSACAGLAGGAVPA AQL SSSYHA + SSS  P
Sbjct: 72  MPIVRRWIKGPMWLHFLVGAPPVIVFSSACAGLAGGAVPAFAQLASSSYHAAISSSSSPP 131

Query: 123 ---QDEKSHKSGTSST 136
              QDEK  KS TSST
Sbjct: 132 TVSQDEKMRKSRTSST 147

[Close]

BLAST of Spo04012.1 vs. NCBI nr
Match: gi|694324269|ref|XP_009353161.1| (PREDICTED: uncharacterized protein LOC103944420 [Pyrus x bretschneideri])

HSP 1 Score: 200.3 bits (508), Expect = 2.200e-48
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 1

		  
Query: 6   SNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPT 65
           S P+  T + C HCAGPLSK+METS WTVAPL+RDSFSMIGSAVGGT SAFY FN+VMP+
Sbjct: 4   SKPETSTGMRCHHCAGPLSKKMETSEWTVAPLIRDSFSMIGSAVGGTASAFYGFNHVMPS 63

Query: 66  VYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAP--Q 125
           V +WVKGPMWLHF +GAPPVIVFSSACAGLAGGAVPA+AQL SSSYHAV+ SSS  P  Q
Sbjct: 64  VRRWVKGPMWLHFFVGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAVVSSSSLPPTSQ 123

Query: 126 DEKSHKSGTSS 135
           DEK HKS TSS
Sbjct: 124 DEKMHKSRTSS 134

[Close]

BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RY54_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015700 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.200e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1

		  
Query: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60
           MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN
Sbjct: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60

Query: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120
           YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ
Sbjct: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120

Query: 121 APQDEKSHKSGTSST 136
           APQDEKSHKSGTSST
Sbjct: 121 APQDEKSHKSGTSST 135

[Close]

BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKP8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_168130 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.400e-54
Identity = 110/135 (81.48%), Postives = 121/135 (89.63%), Query Frame = 1

		  
Query: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60
           MAK S+N KVVT + CP+CAGPLSKEMETSRWTV P +RDSFSMIGSAVGGTTSAFYAFN
Sbjct: 1   MAKTSTNLKVVTPLPCPNCAGPLSKEMETSRWTVQPFIRDSFSMIGSAVGGTTSAFYAFN 60

Query: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120
           YV+PTV KWV GPMWLHFLIGAPPVIVFSSACAGLAGGAVPA+AQL SSSYHA MLSSS 
Sbjct: 61  YVIPTVRKWVIGPMWLHFLIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAMLSSSH 120

Query: 121 APQDEKSHKSGTSST 136
           + Q++ +HKS TS+T
Sbjct: 121 SSQNDNTHKSRTSTT 135

[Close]

BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: M5Y366_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013216mg PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.700e-47
Identity = 102/132 (77.27%), Postives = 111/132 (84.09%), Query Frame = 1

		  
Query: 6   SNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPT 65
           ++ K  TS+ C HCAGPLSKEMETS WTV PL+RDSFSMIGSAVGGT SAFY FN+VMP 
Sbjct: 2   ADSKPTTSMRCHHCAGPLSKEMETSGWTVPPLIRDSFSMIGSAVGGTASAFYGFNHVMPV 61

Query: 66  VYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAP--Q 125
           V +WVKGPMWLHF IGAPPVIVFSSACAGLAGGAVPA+AQL SSSY AV+ SSS  P  +
Sbjct: 62  VRRWVKGPMWLHFFIGAPPVIVFSSACAGLAGGAVPALAQLASSSYRAVVSSSSLPPTSE 121

Query: 126 DEKSHKSGTSST 136
           DEK HKS TSST
Sbjct: 122 DEKIHKSRTSST 133

[Close]

BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: A0A067J952_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06858 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.700e-47
Identity = 101/132 (76.52%), Postives = 110/132 (83.33%), Query Frame = 1

		  
Query: 6   SNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPT 65
           S  K+ + + C HCAGPLSKEMETS WTVAPL+RDSFSMIGSAVGGTTSAFY FN+VMP 
Sbjct: 4   SKSKLQSKLRCHHCAGPLSKEMETSEWTVAPLIRDSFSMIGSAVGGTTSAFYGFNHVMPV 63

Query: 66  VYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSS--QAPQ 125
           V KWVKGPMWLHFLIGAPPVIVFSSACAGL GGAVPAVAQL SSSYHA + S S    P+
Sbjct: 64  VRKWVKGPMWLHFLIGAPPVIVFSSACAGLVGGAVPAVAQLASSSYHAAVSSPSLPPPPK 123

Query: 126 DEKSHKSGTSST 136
           D+K H S +SST
Sbjct: 124 DQKMHGSRSSST 135

[Close]

BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: A0A0B0N1S1_GOSAR (Type II inositol-1,4,5-trisphosphate 5-phosphatase OS=Gossypium arboreum GN=F383_33581 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.300e-47
Identity = 101/134 (75.37%), Postives = 114/134 (85.07%), Query Frame = 1

		  
Query: 5   SSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMP 64
           +SNP  + +++C HCAGPLSKEMETS WTVAPLVRDSFSMIGSA GGTTSAFY FN+VMP
Sbjct: 3   NSNP--LRNLSCHHCAGPLSKEMETSEWTVAPLVRDSFSMIGSAAGGTTSAFYGFNHVMP 62

Query: 65  TVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAP-- 124
            V ++VKGPMW+HFL+GAPPVIVFSSACAGLAGGAVPA+AQL SSSYHA   SSS  P  
Sbjct: 63  IVRRYVKGPMWVHFLVGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAFSSSSSLPPS 122

Query: 125 -QDEKSHKSGTSST 136
            QD+K HKS T+ST
Sbjct: 123 SQDDKMHKSRTNST 134

[Close]

BLAST of Spo04012.1 vs. TAIR (Arabidopsis)
Match: AT3G04040.1 (unknown protein)

HSP 1 Score: 171.4 bits (433), Expect = 3.800e-43
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 1

		  
Query: 16  CPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPTVYKWVKGPMW 75
           C HCAGPL+K +ET+ WTVAP +RDSFSMIGSAVGGT SAF  F++VMP V KW+KGPMW
Sbjct: 16  CHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPMW 75

Query: 76  LHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAPQDEKSHKSGTSST 135
           LHFL+GAPPVIV SSACAGLAGGAVPA+AQL SSSYHA  + SSQ PQ +  ++   SST
Sbjct: 76  LHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAA-VHSSQPPQGQDKNQLHNSST 134

[Close]

BLAST of Spo04012.1 vs. TAIR (Arabidopsis)
Match: AT5G18250.1 (unknown protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.400e-42
Identity = 85/122 (69.67%), Postives = 98/122 (80.33%), Query Frame = 1

		  
Query: 14  ITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPTVYKWVKGP 73
           I C HCAGPL++ +ETS+WTV P +RDSFSMIGSAVGGT SAF  FN+ MP V KW+KGP
Sbjct: 10  IRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGP 69

Query: 74  MWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAPQDEKSHKSGTS 133
           MWLHFL+GAPPVIV SSACAGLAGG VPA+AQL SSSY A  + SSQ PQ +K +K   S
Sbjct: 70  MWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAA-VHSSQPPQAQKDNKMQKS 129

Query: 134 ST 136
           +T
Sbjct: 130 TT 130

[Close]

BLAST of Spo04012.1 vs. TAIR (Arabidopsis)
Match: AT2G41945.3 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.100e-9
Identity = 30/92 (32.61%), Postives = 47/92 (51.09%), Query Frame = 1

		  
Query: 13  SITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPTVYKWVKG 72
           S  CP C   L+   E   WT+ P++ D+ ++ GS +GG  SA +AFN  +P +     G
Sbjct: 28  SARCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSG 87

Query: 73  PMWLHFLIGAPPVIVFSSACAGLAGGAVPAVA 105
              L FL+G P ++V+S   A        A++
Sbjct: 88  SKRLSFLVGVPLLLVYSGVGAAFGESLQAAIS 119

The following BLAST results are available for this feature:

BLAST of Spo04012.1 vs. NCBI nr
BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
BLAST of Spo04012.1 vs. ExPASy Swiss-Prot
BLAST of Spo04012.1 vs. TAIR (Arabidopsis)

BLAST of Spo04012.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902236597\|gb\|KNA24451.1\|	3.2e-68	100.	hypothetical protein SOVF_0157...	[more]
gi\|731344706\|ref\|XP_010683563.1\|	8.2e-56	86.0	PREDICTED: uncharacterized pro...	[more]
gi\|902170450\|gb\|KNA07840.1\|	7.7e-54	81.4	hypothetical protein SOVF_1681...	[more]
gi\|698524559\|ref\|XP_009759086.1\|	2.2e-48	75.0	PREDICTED: uncharacterized pro...	[more]
gi\|694324269\|ref\|XP_009353161.1\|	2.2e-48	77.8	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RY54_SPIOL	2.2e-68	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QKP8_SPIOL	5.4e-54	81.4	Uncharacterized protein OS=Spi...	[more]
M5Y366_PRUPE	3.7e-47	77.2	Uncharacterized protein OS=Pru...	[more]
A0A067J952_JATCU	3.7e-47	76.5	Uncharacterized protein OS=Jat...	[more]
A0A0B0N1S1_GOSAR	8.3e-47	75.3	Type II inositol-1,4,5-trispho...	[more]

BLAST of Spo04012.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo04012.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
AT3G04040.1	3.8e-43	71.6	unknown protein	[more]
AT5G18250.1	1.4e-42	69.6	unknown protein	[more]
AT2G41945.3	2.1e-9	32.6	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34459	FAMILY NOT NAMED	coord: 16..135 score: 3.5
None	No IPR available	PANTHER	PTHR34459:SF1	SUBFAMILY NOT NAMED	coord: 16..135 score: 3.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane