Spo23531.1 (mRNA) | SpinachBase

Overview


Name	Spo23531.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Myelin-associated oligodendrocyte basic protein isoform 1
Location	chr6 : 24959505 .. 24967938 (+)
Sequence length	2530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGCATGGCCACCACAACTTCATTCCCACTCTTTCAACCTCAAGTCAGTTTCTCTGGTTCTTCTCCCTCAATTCAACTCAAAATATCTCCCCCTATCCAAAAATTAAAAATTAAAAATTAAAAATTAAAAATTAAAAATTAAAAATTAAAATAAAAATAAAACTTCACCTTGAAAATTCCAAGCTTTTTTTATCAATGGCGAATTCCCTGCTTCTCGACCCGTCAGCATTAACCACCACTAAACATCCTAGTTTTCTCTCTCCTCAATCCACCCCTCTTTTGCGCCCTTATCCAATTCGATTAACCTCCTTAACCACATTTTCCTCCCCTTTTATAAACCCTAAATCTTCCCAAAAACCCTTCAAATTATCCCCAAAATGCAACGCCAAAACCCCGAATTCTTCCGATTCCGAACTGGGTATCAAAGAGAAGACCCTGAGTTCAATTGGGTTTATTTTAGATAAGATTTCCGAGGCCTTAAATGTCCTTAAGAAGCCGGCGGTTGCGGCTTTGTTGGTGGGTGTTTTGTTGATGTATGACCCGAATTCTGCTTTTGCGGCGTCTGGGGGGAGAATGGGAGGGCGGTCATTTGCTCCGAGATCGTCGATGTCGTCTGGTTCTCGGAGCTACTCTGTTCAGCCCTCGAGCCCGGGGCTTTCACGTTCGGTGCCGTATTTCGCTCCTTCCCCGTTTGGGGGTGCTGGGATTTATGTTGGACCGGCTTTTGGAATTGGAGCTGGCTCGAGTTTGTTTTTGATTATGATGGGTTTTGCTGCGTTTATTTTGGTTTCTGGTTTCCTTTCTGATCGGGATGATGGTGGGTTGTTGACGGCTACTGAGAGAACTAGTGTGATCAAACTTCAGGTAATGTGCCAATAGTTGGATGTATGGTTGCTCATTTCCCTTTTTTCATTTGGTAATCATAAAGTTAGGCAACAATATAGTAGGATGTTAACTTATTACTCTATTCGTGCCACTTCAAGGCCACATCTGACTATAAGTTTTTCTTCAGAAATCGGTTTGAAATAACGTAATTTCCCATATAATTGTTGAAAACAAACATCTTGTTATGCGTGGCAGATCACAATTGGTGTATGACTACCTTAAATGTTTTATTGCTTTTTCATTTTTCTTTCAAAAAAATGGTTGTATGTGGTTGTTAACTTTTTCTTGAAACAACCTCTGAGACGTTTAGGTTGGCTAGGGGCGAAATCTTAAGGCTATGAGCATCTGTTATGATAAAAGGATACTCATCTGAGTCATCTCTCATCTATAGGCTTAACATGGGTTTGTGTATGTTTGACCAAGTGTAACCAATCCCAACAGGACAACACCCCCCTCCCACGCTCCCTGATGCATGCTATGGGACATATTTTTGGAACATAACATGGTAGCATGGACGTGTAGTACACTAGTTGTATGAGCTAGTTTTAAAAAAATACGTGTTGGTTATGCTTCCATGTCCATTCAATGCTCCTGTTAAAAATGGTCTGACCATTTGTTAAGGTGTTTAACCATGTTTCTAAGTATTGTAACAGACGAACAGGGCCCTTCTTGCATGTGTTTTTAATTGTTTGTAGACTGGCTTGACTAGTTGTTGAAGTATTGAACCATGTGTCTAAGCCTTATGTAGTATTGTAATAGAGCCCTTCTTGCATGTGTAATTTTCATTTTCTAGTCCTAGTTATGGTTGTTGCTTTTTAATCGAAAGTTCTGGTGCATTATAGGTCGGACTTTTGGGCATGGCACGGTCACTTCAAAGTGATCTCAATCAGATTGCTGAAACTGCTGATACATCAACCCCAGAGGGTCTAAATTATGTTTTAACTGGTGGGTCTTTCTTTCTAGTGTCTTTTTACATTAATTTGTGTCTCCTCAAAGTACTATGTCAATTTCTGTTCTTTCATTTTATTGGAGGGCATGAATAGCTATGTGCCATGTGACTTCTTATTACTGTTGTATTAAAATGCTATATCTAGTATTTTGTCTCCCGAAATGAGTCCAGGGAATGAAGTTAGCAGTGGGTAATCTCTAATTTATGGATATTGCTTGAGGCCATGATGTTTCCAGACTTTCTGGATTGGTTTTATATTCTCCTGTCACTTTCATGGCGATATTGATACATTGTATTGGCATTTTGGAGGATAATATCAGTGTAATTTTTTGTTGGTTTTGGCTTGATTAGCATAGGAATGTTGTTAAGGGTGACTTCTATAAGTCAGATTCTGACTGTTGGTAAAGAAGGTACTTGTTATTGCAACTAGCAATTGCTGGCTTTAGGAGAAGCAGGTCATGATAGGTTTAAACTAAGAATTGGTGGTTTAGTGTAATGGTTGGAGACTATCATAAAATAATCATGGGATATTTCCAAACAATAATTAACTTTTTGTAGTTAAGAGTTACTAATCTAGGTTGTGAATAGTTGCTGCTTTCTTTCAGGCCTGGTGGTATTATATAATCACTACTTTTAAGCCTTATAGAAGTTATTACTTATATGAAGTATTTGATCATTATGATCTCTTGTGTGGGTGAGTGAGTGATTGAGTGTGCGCTAAAGAAGGAAGGGGTTCACTTTTGTTTAAAGTTCTTAATCCTTCTTATTCTTCTTTATTGATTTTGTATTACTGATGCAAAATTTGTTCCATTTTAATCTTCCAGAATCGATGCTGGCTTTGCTTCGGCACCCTGATTATTGCATATCAGCCTATTCATCTGTGAGTTGAAAATATCTCTTACCATTTCACTAGCAACAATTTCTGTTAGAGAAATTAAAGCTTCTATCATTATTGTAGCTGTATTGAGTGGAACCTTTTAAGATATAGTTGTGTAAATCTTAATTGCTGCGATGATTTGACATCATTTTCAGGAAGAATCTTATATGATTGTTCTCATTCTTGAAGCTGTGACATATATGTTTTTTCCTATGTGCATTTTTTTGGAGATAGATTTTTATGTATATTATTCAATTTTTGAATTTATTATAACGAGGGAGCCCCATGTTGGTTGATACTTGATTCAAAACGGAACATGAGAGTCCCACCTCCCAATTCTCCCCTAACGAAAAGTAACATGAGAGTGCTAAGCTAGTAGACCTGATAAGTATACAGTTGAAAAACATCCATGTGTACCGGTTTTTCTGAGATAGTATTTTAGATATGAGGAATAGTTACTTTCTTGAACATGCCACAGTTGGGGTTGTTAAGGACTTAAGGTATTACACCATCAACCCCCTTCCCCTTTAGCATGATGATGAGGTAACAAGGTTGTGCGTGACCTAGATAACCAACGCTTACTGGGAGGCAACTCGTACTTTATGGCTTTTTAGTGTCAATATTTATTGCTTTACTTTAATTTTTACTTAGAGAGGTGAGGAGAGCATATTTTACCACTGCCAACACTACAGCTTTTCCAGCTTCAGCAAAGTGATTTTTTGTTTCTGACTGATTTTCCGGATGTAGTGCCATAACTGTGATCCACTTATTATTTTGTTTTGACAATTAAGGGGGTACAACTTCCCGTGTCCCCAAGTCCATAACCAAAATTTGGATACACAGTACTTCTGAAACTTGTCACCGGGTCCTTGATTTTAGAATTTTCCGTGTCCGACTCTCGGATCCATACATGAGTCAGATACTTGTGTCCAAGTTCCAACATTGTATTATTTTCAATGTTCACCAAAAGTTATGATGATTTAATCAAATAGAGATTCATTAGGACTGTTAACATGCCAACTTATATGCAATTAGAAAACTCTCCAGAGCAGGAAGAAAATCAGAATCAAAGCTCTTTAAATGTGTTCCATAGTATGAATTAGCACTTCGGTAATGGCTCTTGGAATCAAGATATGTTCTTATTTTAACCTAATGCCTTCCAGACCTTTGAACAGTGATCGTGCTTGCTGCCAGTCCATACCCCCTACCATCAACCCTGAATAAGTGGGTAGTCAATGGATGCTAACACCTAGAGTTGTTGGATAAAATATGTCATCCATTTTGACACGCATTGGATAACATTATGTCTTTCCCTTTAATGTTAGAGCCCTGTGTGTGGTAATTTATCTTTTTTGCCAAGGAAGGATAAAATTAAAAACAAAGATATTAGATTTAGCCACCTACCCACTGCTAATTAGTAATTATCGATATGTTTTTCTATTTAATGTTGAGATAGTAATTTGTAGTACTTGGTTTTGCTTTAGCACCATGTTTCGTGACCTCATCAGTTGATGTTACTTTGAGCTTTTTTGTCTGTTAGTTGTGTTGTTCCAAGTTTTAAAGCTCTTTATTAACTGTTATCTTGCAGTCCAATTGATATGTTCGTTTTGACAATCATCAGGTCGACATCAAAAAGAGTATAGAGGAGGGAGAAAAGAGGTTCAATCAACTTTCAATCGAGGAACGAGGGAAATTTGATGAAGAAACTCTTGTTAATGTGAATAACATAAAGAGACAGAGCAATAAAAGCTCAAGAGCCACTGGATATAGCAACGAGTACATAGTGGTAATCATGAGTTAAACCTCTTATAAATCATTTAATAATTGCTTGCTCATCTAATTTTGAGCAACACTTCCCCTTTGCCTAATTTCACTATTCTGCCTTGTTCGCATCTCTATTAATTGCTTTTCCCTGTGTCCGGGGGTGTTATACGAAAGGGGTTAACATTTTCTCTGCGTGGCATTAGGGTCTTGCAGACGAGTAGTTGCAGTACTGTCTACGGAAGTTCTAGGATATCACCCACCCTTGACCTCACATAGGCTTTGGCTTTGTTTGGAAATTGGCTTGTGCCCAGCTTTTTGTTTGGTTATTGATGTAAGCAAACAGTTGAAAAATATGTTTGGTAAATGGCTTTTCAACTAGCCAAAATTGAAAAGCTTTCGGAGTAGATTTTTGGCTACCTTTCCTAGCTTAAAATGAAAAAGTCGGTCATTATTAGTTATTAACAGCTAGCAGCAACAACTGATTCGAGCATCGAGTAGGCCATCCAAACAAGCCAAGTGAACTATCCAACATGGTCTTCGGCTGTTTGTATTAGTTGTTGAAGTTTGTTAAGATGTTTGATAAAATAAGTTGTGAGGTGGTGGTTGTTAATGTAAAAATGAATACTTTTTAGGCAAAAAGATCATTCAAGTTATACGAAAGCTGAAAAAACCATTTACCAAACATATTTTTTCGATTGTTTGACCACATTAATTTGCCTAATTCAACCGAAATGCTTACTAGAAGCCATATTCCAAACAAGCACGTAGATTATGGGCCTCTCTTTTAGACAATATTTTGGGTGGTTGGGGTGGGTTGAGGGGTATTTAATGGTCAAAGGAGGTTCTTTATATTGTCTGTGGTGTGTGTGTGTGTGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGAGGGGGTGCTTTATTGGTGTGAGGAGGTCTGATCATCCACAGACTATATCAAGAACATGGAATTGTTGATGAATGAGGCATAAATTTGGGTTTCTGAAGGCCAATTATACGATCTTTTCGTATATAAAAAGATTTCATATAATTGCTCATTGTGAATGTTACAACAAATTTGATTGGGTAGTCTAACGGCCGGAAAGAGATTAATTAGGTTGTTAGCAATTTGGCGTGATGGAACATATCCTAAAAGGTCTTATTCTGATTCATTAGTAAAAAGCCAGATGTCTATGCTGTAGGCGAGTTTAGCTATTAGCTGTTAGTGTCAGCAGGTCTTCTCCCAGTGCTACTAGTCTACTACGTATAAGTTAAATAAGAGGTTTTATTTAGGAATTCTTTTTCTTGATGTACTAAGATGTGCATGAATATTTTGTTGTTTTTAAGCCAATGCAATTGCATTCCTTTAAGTATTGTGCTTGGACTCTTTTCTATAAGGCACATTCCTTTGCTTCTGATGCTAATTTTTGCCAGCTTGGAGCATTTCAGCTGTTTGACATTCTTGTTCAGCATGGCTGTTAGTTTCTGCATTGTTTCCATTTGCCAAATGAAATTGTTTCCACTTAGGCGGTGTTCTTTTCACTTGAGTTTCACTTATCTGATGGAAATTATTTATAGCCCCGAACTTATATTATCTCAAATTCTCAACTTATCTGAACTTGCTTAGTCCCCTAGACCTGAACTTGTTAAATCGGAAATAAGTGAAAATAAGGTGGGGGAAAATAGAGCCCTGAATTTATCGTAACTTATTTATCTAAACATGCCCCTGTACTTATCTTTTCAACCCTGAACTTATATTATCTGAACATAGATTTTATTAGCATGAACGTATCTGAACTGAAATAAGTGAAATTAAGGCGAGGAGAGCAGAACCTTAGTCACCCTTCCCCAGCCCAAATAGGAAAGGCACTTGCTGGGGACTACTGAAGCTACAATTTGAATTACTGTTGTACTCTATTTTCGTCCTTGTGATGGCGATGTTTATATTTGTTCAGATTACCATTTTGGTGGCTGCTGAAGGACTACATAAACTGCCTACCATTAACGGGAGCATGGATTTGAAAGAAGCGATGCAAAAACTTGGGTCAATTCCTTCAAGTAAAACTATGGTAAGAAGTTGTACTTGGATTTCCTTCATTTCTTTTATTTCTGTTGACAAGTAAAGAACTCGCCAAAACAGAAAGTAAAAGCAAGAGTAAGACCACAGGGAAAACAAAATAAGGCCAATTTGATTTATCCTCAGCATGTCTTTATATATTTGCAGGCAGTGGAGGTGCTTTGGACTCCTCAGAATGAAAATGATACATTGTCAGAGAGAGAACTACTTGAAGACTACCCCCTTTTGAAGCCTCTATGAGTACAATCTTTTTTGCTTTTACCTGTATATACCAGGACTATAAAGCTAAACTGATAGGATTTCTTATACCGAGTGTTGAATGGTTTTTTTTTTTTTTGGAACTGTTTCTCTTTTCATAACAGGTTATATAACCATAAGCATTTGTAATTAATACATAATCTTTTTCAGCTCAGGAACTCTTATACAAACATAATAACAGATGATGGTTTATTACAGATTTCTTGTTGAGAAGTTTAAAACAAATGGAGTGTTGTTACCATAAGGTTATTAGCCGGAAACTCCGATATGAATTGTGTTTTGGAGGGAACAGCAGACAGATGGGATTACACCGTTGCCTTGGTTGAAAAGGCGATGAGAGATTAGAACATACAGTTATAGTGGTGTAACCAGAATTTTACCTATAGAGTTGGAAGGGGTTTATCTGGTTTTCAAAATCGTTTTTTAGGTTTGAATGGTTGGTCTTCAAAGTACATTCCTTTCAATCATTTACAAGTAATTTCTCACTTTAGATATTATTGTTGATGGTATCATTGGTAATTTGTAGAGGTGGTAAATGGACTGTTTGGGCCGGTTATATATTTAACGGATATTTCATGAAATACCCCCGAGTTTTAGCGTAATTCACCAAACGCCCATCAAGTTTCAGAAATACGTAAAATACCCCTCACAAATGACTTAATACCCCAAATATCCCTTAATGACGTCATCAACCTTAATTAATCCGATTAACACCTAATGAACCGACTAACTCCTAATTAACCCCCTAATCGACCCACCCATTAACCCCTAATCAACCCACCCATTAATCCACCCATTTTTCCTTCCTCTTCTTCTCTCTTCCTTTCCTCCTCACCCCTTCTCTTCCTCATCACCACCACACACCGCCACCGCCACACCCCTTCTCTTCCTCACCACCCCACACACCGCCACAGCCACCTACAGAAAACCCCAAATTGAAATTTTAATTAATTACCAATTACATATTAAATTGAATTGAATTGCTAGTTCATCAATTTAGGGAAAATGGAAAGCAAGGGGCTGAGTAAAAATCGAATTTGCCTCTGATTTTTCGAAGCAAATCGTTGGGTGTTGGAGCATTCTTTGATGCCGCTTCTTCGAATTTCTGTTTGAATC

mRNA sequence

CTTGCATGGCCACCACAACTTCATTCCCACTCTTTCAACCTCAAGTCAGTTTCTCTGGTTCTTCTCCCTCAATTCAACTCAAAATATCTCCCCCTATCCAAAAATTAAAAATTAAAAATTAAAAATTAAAAATTAAAAATTAAAAATTAAAATAAAAATAAAACTTCACCTTGAAAATTCCAAGCTTTTTTTATCAATGGCGAATTCCCTGCTTCTCGACCCGTCAGCATTAACCACCACTAAACATCCTAGTTTTCTCTCTCCTCAATCCACCCCTCTTTTGCGCCCTTATCCAATTCGATTAACCTCCTTAACCACATTTTCCTCCCCTTTTATAAACCCTAAATCTTCCCAAAAACCCTTCAAATTATCCCCAAAATGCAACGCCAAAACCCCGAATTCTTCCGATTCCGAACTGGGTATCAAAGAGAAGACCCTGAGTTCAATTGGGTTTATTTTAGATAAGATTTCCGAGGCCTTAAATGTCCTTAAGAAGCCGGCGGTTGCGGCTTTGTTGGTGGGTGTTTTGTTGATGTATGACCCGAATTCTGCTTTTGCGGCGTCTGGGGGGAGAATGGGAGGGCGGTCATTTGCTCCGAGATCGTCGATGTCGTCTGGTTCTCGGAGCTACTCTGTTCAGCCCTCGAGCCCGGGGCTTTCACGTTCGGTGCCGTATTTCGCTCCTTCCCCGTTTGGGGGTGCTGGGATTTATGTTGGACCGGCTTTTGGAATTGGAGCTGGCTCGAGTTTGTTTTTGATTATGATGGGTTTTGCTGCGTTTATTTTGGTTTCTGGTTTCCTTTCTGATCGGGATGATGGTGGGTTGTTGACGGCTACTGAGAGAACTAGTGTGATCAAACTTCAGGTCGGACTTTTGGGCATGGCACGGTCACTTCAAAGTGATCTCAATCAGATTGCTGAAACTGCTGATACATCAACCCCAGAGGGTCTAAATTATGTTTTAACTGAATCGATGCTGGCTTTGCTTCGGCACCCTGATTATTGCATATCAGCCTATTCATCTGTCGACATCAAAAAGAGTATAGAGGAGGGAGAAAAGAGGTTCAATCAACTTTCAATCGAGGAACGAGGGAAATTTGATGAAGAAACTCTTGTTAATGTGAATAACATAAAGAGACAGAGCAATAAAAGCTCAAGAGCCACTGGATATAGCAACGAGTACATAGTGATTACCATTTTGGTGGCTGCTGAAGGACTACATAAACTGCCTACCATTAACGGGAGCATGGATTTGAAAGAAGCGATGCAAAAACTTGGGTCAATTCCTTCAAGTAAAACTATGGCAGTGGAGGTGCTTTGGACTCCTCAGAATGAAAATGATACATTGTCAGAGAGAGAACTACTTGAAGACTACCCCCTTTTGAAGCCTCTATGAGTACAATCTTTTTTGCTTTTACCTGTATATACCAGGACTATAAAGCTAAACTGATAGGATTTCTTATACCGAGTGTTGAATGGTTTTTTTTTTTTTTGGAACTGTTTCTCTTTTCATAACAGGTTATATAACCATAAGCATTTGTAATTAATACATAATCTTTTTCAGCTCAGGAACTCTTATACAAACATAATAACAGATGATGGTTTATTACAGATTTCTTGTTGAGAAGTTTAAAACAAATGGAGTGTTGTTACCATAAGGTTATTAGCCGGAAACTCCGATATGAATTGTGTTTTGGAGGGAACAGCAGACAGATGGGATTACACCGTTGCCTTGGTTGAAAAGGCGATGAGAGATTAGAACATACAGTTATAGTGGTGTAACCAGAATTTTACCTATAGAGTTGGAAGGGGTTTATCTGGTTTTCAAAATCGTTTTTTAGGTTTGAATGGTTGGTCTTCAAAGTACATTCCTTTCAATCATTTACAAGTAATTTCTCACTTTAGATATTATTGTTGATGGTATCATTGGTAATTTGTAGAGGTGGTAAATGGACTGTTTGGGCCGGTTATATATTTAACGGATATTTCATGAAATACCCCCGAGTTTTAGCGTAATTCACCAAACGCCCATCAAGTTTCAGAAATACGTAAAATACCCCTCACAAATGACTTAATACCCCAAATATCCCTTAATGACGTCATCAACCTTAATTAATCCGATTAACACCTAATGAACCGACTAACTCCTAATTAACCCCCTAATCGACCCACCCATTAACCCCTAATCAACCCACCCATTAATCCACCCATTTTTCCTTCCTCTTCTTCTCTCTTCCTTTCCTCCTCACCCCTTCTCTTCCTCATCACCACCACACACCGCCACCGCCACACCCCTTCTCTTCCTCACCACCCCACACACCGCCACAGCCACCTACAGAAAACCCCAAATTGAAATTTTAATTAATTACCAATTACATATTAAATTGAATTGAATTGCTAGTTCATCAATTTAGGGAAAATGGAAAGCAAGGGGCTGAGTAAAAATCGAATTTGCCTCTGATTTTTCGAAGCAAATCGTTGGGTGTTGGAGCATTCTTTGATGCCGCTTCTTCGAATTTCTGTTTGAATC

Coding sequence (CDS)

ATGGCGAATTCCCTGCTTCTCGACCCGTCAGCATTAACCACCACTAAACATCCTAGTTTTCTCTCTCCTCAATCCACCCCTCTTTTGCGCCCTTATCCAATTCGATTAACCTCCTTAACCACATTTTCCTCCCCTTTTATAAACCCTAAATCTTCCCAAAAACCCTTCAAATTATCCCCAAAATGCAACGCCAAAACCCCGAATTCTTCCGATTCCGAACTGGGTATCAAAGAGAAGACCCTGAGTTCAATTGGGTTTATTTTAGATAAGATTTCCGAGGCCTTAAATGTCCTTAAGAAGCCGGCGGTTGCGGCTTTGTTGGTGGGTGTTTTGTTGATGTATGACCCGAATTCTGCTTTTGCGGCGTCTGGGGGGAGAATGGGAGGGCGGTCATTTGCTCCGAGATCGTCGATGTCGTCTGGTTCTCGGAGCTACTCTGTTCAGCCCTCGAGCCCGGGGCTTTCACGTTCGGTGCCGTATTTCGCTCCTTCCCCGTTTGGGGGTGCTGGGATTTATGTTGGACCGGCTTTTGGAATTGGAGCTGGCTCGAGTTTGTTTTTGATTATGATGGGTTTTGCTGCGTTTATTTTGGTTTCTGGTTTCCTTTCTGATCGGGATGATGGTGGGTTGTTGACGGCTACTGAGAGAACTAGTGTGATCAAACTTCAGGTCGGACTTTTGGGCATGGCACGGTCACTTCAAAGTGATCTCAATCAGATTGCTGAAACTGCTGATACATCAACCCCAGAGGGTCTAAATTATGTTTTAACTGAATCGATGCTGGCTTTGCTTCGGCACCCTGATTATTGCATATCAGCCTATTCATCTGTCGACATCAAAAAGAGTATAGAGGAGGGAGAAAAGAGGTTCAATCAACTTTCAATCGAGGAACGAGGGAAATTTGATGAAGAAACTCTTGTTAATGTGAATAACATAAAGAGACAGAGCAATAAAAGCTCAAGAGCCACTGGATATAGCAACGAGTACATAGTGATTACCATTTTGGTGGCTGCTGAAGGACTACATAAACTGCCTACCATTAACGGGAGCATGGATTTGAAAGAAGCGATGCAAAAACTTGGGTCAATTCCTTCAAGTAAAACTATGGCAGTGGAGGTGCTTTGGACTCCTCAGAATGAAAATGATACATTGTCAGAGAGAGAACTACTTGAAGACTACCCCCTTTTGAAGCCTCTATGA

Protein sequence

MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSPKCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAFAASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIGAGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQIAETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGKFDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo23531	Spo23531	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo23531.1	Spo23531.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23531.1.exon.1	Spo23531.1.exon.1	exon
Spo23531.1.exon.2	Spo23531.1.exon.2	exon
Spo23531.1.exon.3	Spo23531.1.exon.3	exon
Spo23531.1.exon.4	Spo23531.1.exon.4	exon
Spo23531.1.exon.5	Spo23531.1.exon.5	exon
Spo23531.1.exon.6	Spo23531.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23531.1.utr5p.1	Spo23531.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23531.1.CDS.1	Spo23531.1.CDS.1	CDS
Spo23531.1.CDS.2	Spo23531.1.CDS.2	CDS
Spo23531.1.CDS.3	Spo23531.1.CDS.3	CDS
Spo23531.1.CDS.4	Spo23531.1.CDS.4	CDS
Spo23531.1.CDS.5	Spo23531.1.CDS.5	CDS
Spo23531.1.CDS.6	Spo23531.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23531.1.utr3p.1	Spo23531.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo23531.1 vs. NCBI nr
Match: gi|902198270|gb|KNA13628.1| (hypothetical protein SOVF_114950 [Spinacia oleracea])

HSP 1 Score: 751.1 bits (1938), Expect = 9.700e-214
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1


		  
Query: 1   MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSP 60
           MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSP
Sbjct: 1   MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSP 60

Query: 61  KCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAF 120
           KCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAF
Sbjct: 61  KCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAF 120

Query: 121 AASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIG 180
           AASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIG
Sbjct: 121 AASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIG 180

Query: 181 AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQI 240
           AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQI
Sbjct: 181 AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQI 240

Query: 241 AETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGK 300
           AETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGK
Sbjct: 241 AETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGK 300

Query: 301 FDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKL 360
           FDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKL
Sbjct: 301 FDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKL 360

Query: 361 GSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           GSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL
Sbjct: 361 GSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 399

[Close]

BLAST of Spo23531.1 vs. NCBI nr
Match: gi|731328120|ref|XP_010674876.1| (PREDICTED: uncharacterized protein LOC104890957 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 630.9 bits (1626), Expect = 1.500e-177
Identity = 339/402 (84.33%), Postives = 366/402 (91.04%), Query Frame = 1


		  
Query: 1   MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSP 60
           MANSLLL+PSA TT     FLSPQSTPLLRPYPIRL+SLT F S FINP  S KPFK +P
Sbjct: 1   MANSLLLEPSAFTT----KFLSPQSTPLLRPYPIRLSSLTHFPSSFINPNFSSKPFKFTP 60

Query: 61  KCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAF 120
           KC+AK  NSS+S+LGIKEKT  SIGF+LD IS A   LKKPA+ ALLVGVL+MYDPNSAF
Sbjct: 61  KCDAKNSNSSNSQLGIKEKTQISIGFVLDAISSAFKALKKPAIVALLVGVLIMYDPNSAF 120

Query: 121 AASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAG-IYVGPAFGI 180
           AASGGRMGGRSFAPRSS SSGSRSYSV+PS+P +  S PY+APSPFGG G  +VGPAFG+
Sbjct: 121 AASGGRMGGRSFAPRSSTSSGSRSYSVRPSNPMMPYSAPYYAPSPFGGGGGFFVGPAFGV 180

Query: 181 G--AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDL 240
           G  AGSSLFLIMMGFAAFILVSGFLSD+ +GG+LTATE+TSVIKLQVGLLGMARSLQSDL
Sbjct: 181 GVGAGSSLFLIMMGFAAFILVSGFLSDQSEGGVLTATEKTSVIKLQVGLLGMARSLQSDL 240

Query: 241 NQIAETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEE 300
           N+IAETADTSTPEGLNYVLTE++LALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEE
Sbjct: 241 NRIAETADTSTPEGLNYVLTETILALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEE 300

Query: 301 RGKFDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAM 360
           RGKFDEETLVNVN+IKRQS +SSRATGYSNEYIVITILVAAEG++KLPTINGSMDLKEA+
Sbjct: 301 RGKFDEETLVNVNSIKRQSTRSSRATGYSNEYIVITILVAAEGVNKLPTINGSMDLKEAL 360

Query: 361 QKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           QKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYP LKPL
Sbjct: 361 QKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPFLKPL 398

[Close]

BLAST of Spo23531.1 vs. NCBI nr
Match: gi|703076158|ref|XP_010090270.1| (hypothetical protein L484_006177 [Morus notabilis])

HSP 1 Score: 473.8 bits (1218), Expect = 3.000e-130
Identity = 272/402 (67.66%), Postives = 314/402 (78.11%), Query Frame = 1


		  
Query: 4   SLLLDPSALTTTKHPSFLSPQSTPLL-RPYPIRLTSLTTFSSPFINP-KSSQKPFKLSPK 63
           SLLL+ +    T+  SF  P S P L RP         + SS F    K      KLS K
Sbjct: 5   SLLLEANPSKWTQ--SFPIPLSAPPLPRPRSYNHDLARSSSSRFTGIIKLRHGSSKLSVK 64

Query: 64  C--NAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSA 123
           C   AK   S DSE   +E   +    +   I +AL  LKKPA+A +L+G+LLMYDPN+A
Sbjct: 65  CFFAAKKNQSIDSEKVPEENRANPFEVVASTIMKALKALKKPAIAVVLLGLLLMYDPNTA 124

Query: 124 FAASGGRMGGRSFAPRSSMSSGSRSYSV-QPSSPGLSRSVPYFAPSPFG-GAGIYVGPAF 183
            AASGGRMGG+SF+ RS  +S SRSYSV + S PG S SVPY+APSPFG G G+YVGPA 
Sbjct: 125 LAASGGRMGGKSFSSRSPAASSSRSYSVPRTSGPGFSYSVPYYAPSPFGFGGGVYVGPAV 184

Query: 184 GIGAGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDL 243
           G+GAGSS FLI+MGFAAF+LVSGFLSDR +  +LTATE+TSV+K+QVGLLGM R+LQ DL
Sbjct: 185 GVGAGSSFFLILMGFAAFVLVSGFLSDRSEDSVLTATEKTSVLKVQVGLLGMGRALQRDL 244

Query: 244 NQIAETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEE 303
           N+IAETADTSTPEGL+YVLTE+ LALLRHPDYCIS YSSVDIK+S+E+GEKRFNQLSIEE
Sbjct: 245 NRIAETADTSTPEGLSYVLTETTLALLRHPDYCISGYSSVDIKRSMEDGEKRFNQLSIEE 304

Query: 304 RGKFDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAM 363
           RGKFDEETLVNVNNIKRQS  S RA+G+SNEYIVI+ILVAAEG+HK+P ING  DLKEA+
Sbjct: 305 RGKFDEETLVNVNNIKRQSTTSQRASGFSNEYIVISILVAAEGVHKMPVINGGRDLKEAL 364

Query: 364 QKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           QKLGSIPS K +AVEVLWTPQNENDTLSERELLEDYPLL+PL
Sbjct: 365 QKLGSIPSHKILAVEVLWTPQNENDTLSERELLEDYPLLRPL 404

[Close]

BLAST of Spo23531.1 vs. NCBI nr
Match: gi|118489113|gb|ABK96363.1| (unknown [Populus trichocarpa x Populus deltoides])

HSP 1 Score: 468.8 bits (1205), Expect = 9.600e-129
Identity = 268/417 (64.27%), Postives = 319/417 (76.50%), Query Frame = 1


		  
Query: 1   MANSLLLDPSALTTTK------HPSFLSPQSTPLLRPY-PIRLTSLTTFSSPFINP--KS 60
           MA + L++ S L   K       P  L+P   P L P  P + TS      P +NP  K+
Sbjct: 1   MATASLIESSPLKWKKAFPFQPQPPLLTPNHYPYLIPLKPPKFTSKCISQLPILNPNSKN 60

Query: 61  SQKPFKLSPKC------NAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAA 120
           +  PF +SP        N   P +S + L I          I + + +AL++LKKPA+AA
Sbjct: 61  NNGPFPISPSITKPISQNLSKPPTSKNPLEI----------IYETMLKALDILKKPAIAA 120

Query: 121 LLVGVLLMYDPNSAFAASGGRMGGRSFAPRSSMSSGSRSYSV-QPSSPGLSRSVPYFAPS 180
           +L+GVLL++DPNSAFAASGGR+GG SF+ RSS    SRSYSV +  S G S SVPY+APS
Sbjct: 121 ILIGVLLLHDPNSAFAASGGRIGGNSFSRRSSSEYSSRSYSVPRGGSSGFSYSVPYYAPS 180

Query: 181 PFGGAGIYVGPAFGIG--AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKL 240
           PFGG G+YVGPA G+G  AGSSLF I+ GFAAF+LVSGFLSDR++GG+LTA E+TSV+KL
Sbjct: 181 PFGGGGVYVGPAVGVGVGAGSSLFFILAGFAAFMLVSGFLSDRNEGGVLTAAEKTSVLKL 240

Query: 241 QVGLLGMARSLQSDLNQIAETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKS 300
           QVGLLGM RSLQ DLN+IAE ADTS+ EGLNYVLTE+ LALLRHPDYCIS +S VD+K+S
Sbjct: 241 QVGLLGMGRSLQRDLNRIAEVADTSSSEGLNYVLTETSLALLRHPDYCISGHSFVDVKRS 300

Query: 301 IEEGEKRFNQLSIEERGKFDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLH 360
           +E+GEKRFNQLSIEERGKFDEETLVNVN+IKRQS  S R+ G+SNEYIVITILVAAEG++
Sbjct: 301 MEDGEKRFNQLSIEERGKFDEETLVNVNSIKRQSTSSKRSNGFSNEYIVITILVAAEGVY 360

Query: 361 KLPTINGSMDLKEAMQKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           KLPTINGS DLKEA+QKLGSI +SK +AVEVLWTPQNENDTLSERELLEDYPLL+PL
Sbjct: 361 KLPTINGSGDLKEALQKLGSISASKILAVEVLWTPQNENDTLSERELLEDYPLLRPL 407

[Close]

BLAST of Spo23531.1 vs. NCBI nr
Match: gi|223548207|gb|EEF49698.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 468.0 bits (1203), Expect = 1.600e-128
Identity = 248/316 (78.48%), Postives = 280/316 (88.61%), Query Frame = 1


		  
Query: 87  ILDKISEALNVLKKPAVAALLVGVLLMYDPNSAFAASGGRMGGRSFAPRSSMSSGSRSYS 146
           I +     LN LKKPA+AA+LVG LLMYDPNSAFAASGGRMGGRSF+ RSS SS SRSYS
Sbjct: 46  IYNTFIRTLNFLKKPAIAAILVGALLMYDPNSAFAASGGRMGGRSFS-RSSSSSSSRSYS 105

Query: 147 V-QPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIG--AGSSLFLIMMGFAAFILVSGFLS 206
           V + SSPG S SVPY+APSPFGG G+YVGPA G+G  AGSSLF I+ GFAAF+LVSGFLS
Sbjct: 106 VPRSSSPGFSYSVPYYAPSPFGGGGLYVGPAVGVGVGAGSSLFFILAGFAAFMLVSGFLS 165

Query: 207 DRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQIAETADTSTPEGLNYVLTESMLAL 266
           DR +GG+LTAT++TSV+KLQVGLLGM R+LQ DLN+IAE ADTS+ EGL YVLTE+ LAL
Sbjct: 166 DRSEGGVLTATDKTSVLKLQVGLLGMGRALQRDLNRIAEVADTSSSEGLTYVLTETSLAL 225

Query: 267 LRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGKFDEETLVNVNNIKRQSNKSSRAT 326
           LRHPDYCIS YS VD+K+S++EGEKRFNQLSIEERGKFDEETLVNVNNIK+QS  S  A+
Sbjct: 226 LRHPDYCISGYSYVDVKRSMDEGEKRFNQLSIEERGKFDEETLVNVNNIKKQSTSSKSAS 285

Query: 327 GYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKLGSIPSSKTMAVEVLWTPQNENDT 386
           G+SNEYIVIT+LVAAEG+HKLPTINGS DLKEA+QKLGSIPSSK +AVEVLWTPQNENDT
Sbjct: 286 GFSNEYIVITLLVAAEGVHKLPTINGSGDLKEALQKLGSIPSSKVLAVEVLWTPQNENDT 345

Query: 387 LSERELLEDYPLLKPL 400
           L+ERELLEDYPLL+PL
Sbjct: 346 LTERELLEDYPLLRPL 360

[Close]

BLAST of Spo23531.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2A1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114950 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 6.800e-214
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1


		  
Query: 1   MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSP 60
           MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSP
Sbjct: 1   MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSP 60

Query: 61  KCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAF 120
           KCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAF
Sbjct: 61  KCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAF 120

Query: 121 AASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIG 180
           AASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIG
Sbjct: 121 AASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIG 180

Query: 181 AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQI 240
           AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQI
Sbjct: 181 AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQI 240

Query: 241 AETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGK 300
           AETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGK
Sbjct: 241 AETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGK 300

Query: 301 FDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKL 360
           FDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKL
Sbjct: 301 FDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKL 360

Query: 361 GSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           GSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL
Sbjct: 361 GSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 399

[Close]

BLAST of Spo23531.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIQ2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g082310 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 1.000e-177
Identity = 339/402 (84.33%), Postives = 366/402 (91.04%), Query Frame = 1


		  
Query: 1   MANSLLLDPSALTTTKHPSFLSPQSTPLLRPYPIRLTSLTTFSSPFINPKSSQKPFKLSP 60
           MANSLLL+PSA TT     FLSPQSTPLLRPYPIRL+SLT F S FINP  S KPFK +P
Sbjct: 1   MANSLLLEPSAFTT----KFLSPQSTPLLRPYPIRLSSLTHFPSSFINPNFSSKPFKFTP 60

Query: 61  KCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSAF 120
           KC+AK  NSS+S+LGIKEKT  SIGF+LD IS A   LKKPA+ ALLVGVL+MYDPNSAF
Sbjct: 61  KCDAKNSNSSNSQLGIKEKTQISIGFVLDAISSAFKALKKPAIVALLVGVLIMYDPNSAF 120

Query: 121 AASGGRMGGRSFAPRSSMSSGSRSYSVQPSSPGLSRSVPYFAPSPFGGAG-IYVGPAFGI 180
           AASGGRMGGRSFAPRSS SSGSRSYSV+PS+P +  S PY+APSPFGG G  +VGPAFG+
Sbjct: 121 AASGGRMGGRSFAPRSSTSSGSRSYSVRPSNPMMPYSAPYYAPSPFGGGGGFFVGPAFGV 180

Query: 181 G--AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDL 240
           G  AGSSLFLIMMGFAAFILVSGFLSD+ +GG+LTATE+TSVIKLQVGLLGMARSLQSDL
Sbjct: 181 GVGAGSSLFLIMMGFAAFILVSGFLSDQSEGGVLTATEKTSVIKLQVGLLGMARSLQSDL 240

Query: 241 NQIAETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEE 300
           N+IAETADTSTPEGLNYVLTE++LALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEE
Sbjct: 241 NRIAETADTSTPEGLNYVLTETILALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEE 300

Query: 301 RGKFDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAM 360
           RGKFDEETLVNVN+IKRQS +SSRATGYSNEYIVITILVAAEG++KLPTINGSMDLKEA+
Sbjct: 301 RGKFDEETLVNVNSIKRQSTRSSRATGYSNEYIVITILVAAEGVNKLPTINGSMDLKEAL 360

Query: 361 QKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           QKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYP LKPL
Sbjct: 361 QKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPFLKPL 398

[Close]

BLAST of Spo23531.1 vs. UniProtKB/TrEMBL
Match: W9R6R7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006177 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.100e-130
Identity = 272/402 (67.66%), Postives = 314/402 (78.11%), Query Frame = 1


		  
Query: 4   SLLLDPSALTTTKHPSFLSPQSTPLL-RPYPIRLTSLTTFSSPFINP-KSSQKPFKLSPK 63
           SLLL+ +    T+  SF  P S P L RP         + SS F    K      KLS K
Sbjct: 5   SLLLEANPSKWTQ--SFPIPLSAPPLPRPRSYNHDLARSSSSRFTGIIKLRHGSSKLSVK 64

Query: 64  C--NAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVGVLLMYDPNSA 123
           C   AK   S DSE   +E   +    +   I +AL  LKKPA+A +L+G+LLMYDPN+A
Sbjct: 65  CFFAAKKNQSIDSEKVPEENRANPFEVVASTIMKALKALKKPAIAVVLLGLLLMYDPNTA 124

Query: 124 FAASGGRMGGRSFAPRSSMSSGSRSYSV-QPSSPGLSRSVPYFAPSPFG-GAGIYVGPAF 183
            AASGGRMGG+SF+ RS  +S SRSYSV + S PG S SVPY+APSPFG G G+YVGPA 
Sbjct: 125 LAASGGRMGGKSFSSRSPAASSSRSYSVPRTSGPGFSYSVPYYAPSPFGFGGGVYVGPAV 184

Query: 184 GIGAGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKLQVGLLGMARSLQSDL 243
           G+GAGSS FLI+MGFAAF+LVSGFLSDR +  +LTATE+TSV+K+QVGLLGM R+LQ DL
Sbjct: 185 GVGAGSSFFLILMGFAAFVLVSGFLSDRSEDSVLTATEKTSVLKVQVGLLGMGRALQRDL 244

Query: 244 NQIAETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEE 303
           N+IAETADTSTPEGL+YVLTE+ LALLRHPDYCIS YSSVDIK+S+E+GEKRFNQLSIEE
Sbjct: 245 NRIAETADTSTPEGLSYVLTETTLALLRHPDYCISGYSSVDIKRSMEDGEKRFNQLSIEE 304

Query: 304 RGKFDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLHKLPTINGSMDLKEAM 363
           RGKFDEETLVNVNNIKRQS  S RA+G+SNEYIVI+ILVAAEG+HK+P ING  DLKEA+
Sbjct: 305 RGKFDEETLVNVNNIKRQSTTSQRASGFSNEYIVISILVAAEGVHKMPVINGGRDLKEAL 364

Query: 364 QKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           QKLGSIPS K +AVEVLWTPQNENDTLSERELLEDYPLL+PL
Sbjct: 365 QKLGSIPSHKILAVEVLWTPQNENDTLSERELLEDYPLLRPL 404

[Close]

BLAST of Spo23531.1 vs. UniProtKB/TrEMBL
Match: A9PJ10_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 6.700e-129
Identity = 268/417 (64.27%), Postives = 319/417 (76.50%), Query Frame = 1


		  
Query: 1   MANSLLLDPSALTTTK------HPSFLSPQSTPLLRPY-PIRLTSLTTFSSPFINP--KS 60
           MA + L++ S L   K       P  L+P   P L P  P + TS      P +NP  K+
Sbjct: 1   MATASLIESSPLKWKKAFPFQPQPPLLTPNHYPYLIPLKPPKFTSKCISQLPILNPNSKN 60

Query: 61  SQKPFKLSPKC------NAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAA 120
           +  PF +SP        N   P +S + L I          I + + +AL++LKKPA+AA
Sbjct: 61  NNGPFPISPSITKPISQNLSKPPTSKNPLEI----------IYETMLKALDILKKPAIAA 120

Query: 121 LLVGVLLMYDPNSAFAASGGRMGGRSFAPRSSMSSGSRSYSV-QPSSPGLSRSVPYFAPS 180
           +L+GVLL++DPNSAFAASGGR+GG SF+ RSS    SRSYSV +  S G S SVPY+APS
Sbjct: 121 ILIGVLLLHDPNSAFAASGGRIGGNSFSRRSSSEYSSRSYSVPRGGSSGFSYSVPYYAPS 180

Query: 181 PFGGAGIYVGPAFGIG--AGSSLFLIMMGFAAFILVSGFLSDRDDGGLLTATERTSVIKL 240
           PFGG G+YVGPA G+G  AGSSLF I+ GFAAF+LVSGFLSDR++GG+LTA E+TSV+KL
Sbjct: 181 PFGGGGVYVGPAVGVGVGAGSSLFFILAGFAAFMLVSGFLSDRNEGGVLTAAEKTSVLKL 240

Query: 241 QVGLLGMARSLQSDLNQIAETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIKKS 300
           QVGLLGM RSLQ DLN+IAE ADTS+ EGLNYVLTE+ LALLRHPDYCIS +S VD+K+S
Sbjct: 241 QVGLLGMGRSLQRDLNRIAEVADTSSSEGLNYVLTETSLALLRHPDYCISGHSFVDVKRS 300

Query: 301 IEEGEKRFNQLSIEERGKFDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEGLH 360
           +E+GEKRFNQLSIEERGKFDEETLVNVN+IKRQS  S R+ G+SNEYIVITILVAAEG++
Sbjct: 301 MEDGEKRFNQLSIEERGKFDEETLVNVNSIKRQSTSSKRSNGFSNEYIVITILVAAEGVY 360

Query: 361 KLPTINGSMDLKEAMQKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           KLPTINGS DLKEA+QKLGSI +SK +AVEVLWTPQNENDTLSERELLEDYPLL+PL
Sbjct: 361 KLPTINGSGDLKEALQKLGSISASKILAVEVLWTPQNENDTLSERELLEDYPLLRPL 407

[Close]

BLAST of Spo23531.1 vs. UniProtKB/TrEMBL
Match: B9RES7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1428510 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.100e-128
Identity = 248/316 (78.48%), Postives = 280/316 (88.61%), Query Frame = 1


		  
Query: 87  ILDKISEALNVLKKPAVAALLVGVLLMYDPNSAFAASGGRMGGRSFAPRSSMSSGSRSYS 146
           I +     LN LKKPA+AA+LVG LLMYDPNSAFAASGGRMGGRSF+ RSS SS SRSYS
Sbjct: 46  IYNTFIRTLNFLKKPAIAAILVGALLMYDPNSAFAASGGRMGGRSFS-RSSSSSSSRSYS 105

Query: 147 V-QPSSPGLSRSVPYFAPSPFGGAGIYVGPAFGIG--AGSSLFLIMMGFAAFILVSGFLS 206
           V + SSPG S SVPY+APSPFGG G+YVGPA G+G  AGSSLF I+ GFAAF+LVSGFLS
Sbjct: 106 VPRSSSPGFSYSVPYYAPSPFGGGGLYVGPAVGVGVGAGSSLFFILAGFAAFMLVSGFLS 165

Query: 207 DRDDGGLLTATERTSVIKLQVGLLGMARSLQSDLNQIAETADTSTPEGLNYVLTESMLAL 266
           DR +GG+LTAT++TSV+KLQVGLLGM R+LQ DLN+IAE ADTS+ EGL YVLTE+ LAL
Sbjct: 166 DRSEGGVLTATDKTSVLKLQVGLLGMGRALQRDLNRIAEVADTSSSEGLTYVLTETSLAL 225

Query: 267 LRHPDYCISAYSSVDIKKSIEEGEKRFNQLSIEERGKFDEETLVNVNNIKRQSNKSSRAT 326
           LRHPDYCIS YS VD+K+S++EGEKRFNQLSIEERGKFDEETLVNVNNIK+QS  S  A+
Sbjct: 226 LRHPDYCISGYSYVDVKRSMDEGEKRFNQLSIEERGKFDEETLVNVNNIKKQSTSSKSAS 285

Query: 327 GYSNEYIVITILVAAEGLHKLPTINGSMDLKEAMQKLGSIPSSKTMAVEVLWTPQNENDT 386
           G+SNEYIVIT+LVAAEG+HKLPTINGS DLKEA+QKLGSIPSSK +AVEVLWTPQNENDT
Sbjct: 286 GFSNEYIVITLLVAAEGVHKLPTINGSGDLKEALQKLGSIPSSKVLAVEVLWTPQNENDT 345

Query: 387 LSERELLEDYPLLKPL 400
           L+ERELLEDYPLL+PL
Sbjct: 346 LTERELLEDYPLLRPL 360

[Close]

BLAST of Spo23531.1 vs. TAIR (Arabidopsis)
Match: AT1G54520.1 (unknown protein)

HSP 1 Score: 413.7 bits (1062), Expect = 1.300e-115
Identity = 235/359 (65.46%), Postives = 285/359 (79.39%), Query Frame = 1


		  
Query: 50  KSSQKPFKLSPKCNAKTPNSSDSELGIKEKTLSSIGFILDKISEALNVLKKPAVAALLVG 109
           +S+    ++S K    T +SSD +L         I     ++ +AL+ LKKPA+AA+L+G
Sbjct: 39  RSNSIRLQISVKYKQST-SSSDPDLRSNFNPFEQIAI---QVKKALDSLKKPAIAAVLLG 98

Query: 110 VLLMYDPNSAFAASGGRMGGRSFAPRS--SMSSGSRSYSV-QPSSPGLS---RSVPYFAP 169
           +LL YDPNSA AASGGR+GG SF+ RS  S SS S+SYSV + S+P  S   R+ PY+ P
Sbjct: 99  LLLFYDPNSALAASGGRIGGNSFSSRSRSSSSSSSQSYSVPRTSNPSFSYSARTAPYYGP 158

Query: 170 SPFGGAGIYVGPAFGIGAG--SSLFLIMMGFAAFILVSGFLSDRD-DGGLLTATERTSVI 229
           SPFGG   +VGPA G G G  SS  LI++GFAAF+LVSGFLSDR  D  +LT T++TSVI
Sbjct: 159 SPFGGG--FVGPAVGFGFGGFSSFSLILVGFAAFVLVSGFLSDRSQDDSILTDTQKTSVI 218

Query: 230 KLQVGLLGMARSLQSDLNQIAETADTSTPEGLNYVLTESMLALLRHPDYCISAYSSVDIK 289
           KLQVGLLG+ R+LQ D N++AE++DTSTPEGL+YVLTE+ LALLRHPDYCIS YSSVD+K
Sbjct: 219 KLQVGLLGLGRTLQQDFNRLAESSDTSTPEGLSYVLTEATLALLRHPDYCISCYSSVDVK 278

Query: 290 KSIEEGEKRFNQLSIEERGKFDEETLVNVNNIKRQSNKSSRATGYSNEYIVITILVAAEG 349
            SIE+GEKRFNQLSIEERGKFDEETLVNVN+IKRQS+K  +A+G+SNEYIV+TIL+AAEG
Sbjct: 279 PSIEKGEKRFNQLSIEERGKFDEETLVNVNSIKRQSSKIRKASGFSNEYIVVTILMAAEG 338

Query: 350 LHKLPTINGSMDLKEAMQKLGSIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL 400
           +HKLP ING+ DLKEA+ KLGSIP +K MAVEVLWTPQNE D LSERELLEDYPLL+PL
Sbjct: 339 IHKLPPINGTTDLKEALLKLGSIPRNKIMAVEVLWTPQNEADALSERELLEDYPLLRPL 391

The following BLAST results are available for this feature:

BLAST of Spo23531.1 vs. NCBI nr
BLAST of Spo23531.1 vs. UniProtKB/TrEMBL
BLAST of Spo23531.1 vs. ExPASy Swiss-Prot
BLAST of Spo23531.1 vs. TAIR (Arabidopsis)

BLAST of Spo23531.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902198270\|gb\|KNA13628.1\|	9.7e-214	100.	hypothetical protein SOVF_1149...	[more]
gi\|731328120\|ref\|XP_010674876.1\|	1.5e-177	84.3	PREDICTED: uncharacterized pro...	[more]
gi\|703076158\|ref\|XP_010090270.1\|	3.0e-130	67.6	hypothetical protein L484_0061...	[more]
gi\|118489113\|gb\|ABK96363.1\|	9.6e-129	64.2	unknown [Populus trichocarpa x...	[more]
gi\|223548207\|gb\|EEF49698.1\|	1.6e-128	78.4	conserved hypothetical protein...	[more]

BLAST of Spo23531.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R2A1_SPIOL	6.8e-214	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CIQ2_BETVU	1.0e-177	84.3	Uncharacterized protein OS=Bet...	[more]
W9R6R7_9ROSA	2.1e-130	67.6	Uncharacterized protein OS=Mor...	[more]
A9PJ10_9ROSI	6.7e-129	64.2	Putative uncharacterized prote...	[more]
B9RES7_RICCO	1.1e-128	78.4	Putative uncharacterized prote...	[more]

BLAST of Spo23531.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo23531.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G54520.1	1.3e-115	65.4	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010903	Protein of unknown function DUF1517	PFAM	PF07466	DUF1517	coord: 121..399 score: 1.1
None	No IPR available	PANTHER	PTHR33975	FAMILY NOT NAMED	coord: 30..399 score: 7.7E
None	No IPR available	PANTHER	PTHR33975:SF2	SUBFAMILY NOT NAMED	coord: 30..399 score: 7.7E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast