Spo16799.1 (mRNA) | SpinachBase

Overview


Name	Spo16799.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	E3 ubiquitin-protein ligase RHF2A (6.3.2.-) (RING-H2 zinc finger protein RHF2a)
Location	chr6 : 27098911 .. 27109005 (-)
Sequence length	1386

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTTCAATGCAACTTTATGGTACATTTGATTGGCATGATCAAATTATTTAATGTTCTTTAAGTTGATGTTGAATTTGTTTACTTCTTTTTAATGTGTACCCTGCTGAAACTGGGAATTTTCAACACTATTCCCCTTTCGAAATTTCATGGGTATCTTTGTTTTTATTTTTATAATTATATTTGTTGTGAACTGGGTTTTGTTATTCATCATTAATTATTATTGCGGTATAAAAAGAAAAACCCTTTTGCGCATGTGTGATTTGCAGTTAAATGGGTTTGAGGAATTTTGAAATTTCTCCTTTAATGAATTTGTGTTTGTGGCAACCCTTTGAAATTTGAAAACCCTTTTTTTTTGTGGCAATTTATGTTCTATGTATCATACTGATGGAGGGATAGCTACTCGAATTGGATTGAGATAGAATGTTTTTAAGGAGTAAATGAAACAAAGAAATACCCTGTTTAGATTCATTGGAAAATGGAAGTTGTTTTGTGTAATTTCAGAGAGAGAAAGTGAGATATGTGAATTCATGGATATGATTTCACTCCTGAACTATACCACGTCTAAGTTCTAACCTCCGCTTTGACGACCTAAAGTCCTCTAAAACTTTCATTAAAGACCTAAAGTTTCGAAACTTATTGTGAAGAGAATGATGTTGGATGGCTGCTAAAGTTGTTCTTTCTATTACGTATAGTCAGAATTTGTCTTGTGTTTATAAGGAGTTGTGGAAACCGCATTCCAAATAGTTGGGGTCGATATTCTGAAACACTGCTTCTGGAAAATAAATTATAGTAAGGCTTCTTGTGCTAATGCATTTTGGCGGACCATGCATACAAGACCTTGTAGGAGCTTGAAATCTTGGTAGCTATATTAAAGAAAGCATCCCAAACACAACAGAAAAATGATAATGTAAGAGGCAGAAGCATGGGGAAAATTGTAAGCATTAGGCACCTACGATATGAGCCTTAAATGCCAACCTAATCCAGGAAACTCTATAGTGGGAAATGGGAAGCATCCAATTTGTACCTATAAGTGGTCCACTTAAACACAAAGTGCAAATATCCTTTTTATTATGGTAGGAAGGTTGAATAATTTGAGGCAATCACAAATATCACTCCTTTTTTATATAAGGCACTTGATATGTTGAAAACTCTCCCTCCTTAAGGGAAGATCCTATCATGTGCCCATGGATCTCTTCAAGCCTTATAGGTTTTAGAGTCCTAAGTCAATCACATTGCTGCAACTGGTCTCCATGAGGGGCTTTTGCTACAGTAATACTTAAGCAACACTTCTATAACACCTTGTAGATTTATTTCCTATTCTTATATGTGCTTTCTGTTTGACTTGGAATAGGAGCTTTCAGGAATGGACACTGTTAGGGAGAGTTATGATCATTCAACGAATATTGGAACCTTTCTAGAAGGTGAAATGCAAGGAGCATGTGATGATGCCTGCAGCATATGCCTTGAAGATTTTTCTGAAAGTGATCCTTCAACGGTATTGTTGTGTAATTCTTTTGATTGTCTGTATTTTCATGGTACGATTTGTCTTTGCTTACTTGAAATAGTTGAATATAAAGATAATACTCCCTCCGTCCCATATTAGTTGTTACACTTACTTTTGCACAAAGTTTTGGGTGATAAGTGGTTGTTTGGTTATCAATTTTTATTTTATTGGAAAAGTAGATGTGATAGGAGTTAGTGGAGTATTTTTTTTAATTGAATGAGAGAGGGTGTGGGGACAAAAAAACATTTAGTGGGAAGAGAGAGACAATATAATAATTGTGGGGTCATTCCTAATTTAGAAGTGTAACAACTAATCTGGGACGGACGAAAAAGGAAAGTGTAACAACTAATCTGGGACGGAGGGAGTATCATAATATCAACTAAGTTGATATTCATTATTTCATTTCTATGTTTATTACCTGAATTTGAAAGTAAGATATTGACTTTAGTTGAGCTGAAACTTTTTGGGAGATGTGGCTTTCTGCTATTAAAACATTATATTGTTCAGACAACATTTTGGTCCCCTCTCCAAAATATAAGTGTGTCTGTTTAGCAAATCAAAGCATACTTAGTATGACAATGAAGGCAAACTTCTAGCATACTTGTCTTTTATACAAATAAACCAAGTTCTTTAAAAGCAAACATCTTCTATTGCACCAAGTGCGAAAGGTTAGAGAGGAGATTATTGTGCTGAAAGCCTGAAACTATCATATTCGATAGCCTGTATTTTGCTTGCGAGCCAACAAATCAATGCATTTTGATTGGGAAGGATCAATTTGATGTAGAGAAGAAGCATCTAAGAAAATCTTAAACTAGTCGCTTAGGTGCCTATTTCTTATATAGAGATGAAAGTTTGAAGTTGATTCCTTATCAATATCAAGTCATCGAGGAAGAGGAATCTGCATACAATTTTAAGAGATAAGAGTTTCAAACATCAGTTGATTCAGTTGAAGTCATTTCTTGTGATTTAAGAGTTATGAAGCAATTTGATTTAGTTGCTGAAATGTTTTCTGACTGGTGGAATATCCATAAAGATCAGGGACATGGATTTCCCCCTCTTCTGCAGTTTCCTGTACACACCTTTGTCCTTGTTTAGACATCTTTTTTTTTTTTTATCTTCTTTTGCTTAAGCACACCACAGGCTTTCCCACCTTTGTCCTTGTTTAGAGCTTCTTTTGCTTAAGCACACCACAGTTATACTTCTGTTGGTTTGCATCTACACCTTCATCAATACATATTCTAGTAAGCTTTTGGGGAAGGGGTCTAATCTGGAAGTTTGGATCTTTTGTTGCACTATCAGATAATTCTCCTACAACATTTCAGTTGCCTCACTTGCCTGGTGGAGTTGAAAATTGTCATTGTACACCTAAACATAATATGCTGAATCCGGGAATTCAACTCATCAGCTGAGAATTTAACCTTCTTTTTGTGAACTAATGCTGAGGAAAAAGTCCAATTTCATTCCATTTGCATGAGCTATAAGGTTGTCGATCCATCAAATTTATGTGGCAAACAGAAAAGACATCTTTTTGGAGTTTGACATCTTTAAACTTCAAATTTCTGTTACATTGTTATGTCATTTGAGGGTGAAACCTTTTAGAATATCGTTGTAATTATAATCTTTATCAATCTGTTAACCTCGAGAGAAGAAAAGATAGGTCTTTAAAGAACAGGATTGAAGACTGAGTAACAGCAAAATCCCTCTATGAATGGCCATGGGGCCTTTCTCCTTGTGTCGATTGTATATTTTTATGCTATGCTGTGGTATATGTATGATTTTCAGAGGTGGAAATCCTAATAAAGATGTGTAAGTGAGGTTGTGCTTTGAAGTTTGTAAGTAAATATTTCCTATGCTGCTTTCCACTGTTCAAGGTATCCGCTATTAAGGCTTCCCTTGAGACTGCTCAGTGCTCACAACCTTTTCTGGACCCTGTCTTTTCATAATTGCTTCAAAACCTACTTCCTACCAGGAGAAGATGTTTTTTATTCTCTTTGAAGGTGGTAGACGCTATTCACGGGGTTGCACATAATGGGAATTGTTCTAGTCGAGATAAAAGAAAATTACTGTGATCCTGAGGTTAAAGCTTATTTAAAGCATTTCTTTTCCCAGGGTAAATTTATACCTAGCGGGGGTGAAATCCTGGTTCTTCGCCAAAATCATGACCCGCTGTGGTTGTTTACACATTGTTCTTGGTAGACATCACTTGTCAAATTCAACCAACCTGAAACAAGTGGGCATTTAACAAAAAAAATCGACCCAAAGTCAAAGTTTGTACAAGCCCAATTTTTTTGGTCAAACCTAACTTGACCCAAAGCATAGCATTAAAAGTTACTTAGTATAAAAGAGGAGAGTGTGATTTTTCCTTCAAAAAAATCTTTCAACTGTTTAGCATGGTTTTCATTTAACTTGGACATCATTTGTATGGACGGATTTGGCTATGAAAGACTATGTTTATTAGTTACCATGACCTGATATTTGCAGCATATATTTTGTATTTACTTTTGATGAGACAAGCTCATGCGTATTGCACTTAAAATATGCGAGTAAATATTAAGGGGTCCTAAAATCCTTTAACCCATTGACCTGAAAATGACTTGAACCTGAAATTAATTGTCCTCGACTGGTTGGCTTCTCTATATTGAGAAACAAAATAAGGCTAAGATAATGTCCTGATGGAGTTATCTTTGTGCATTGTGATAATTGCGCCTTACATTTGATGCGTGGTTCATCTTTCTTCTCACACCATTTTTTTTCCAACATTTTCAGGTAACTGATTGCAAGCATGAGTTTCACCTTCATTGCATCCTTGAATGGTACTAATCTTGACACTTTCGATGATATGTTCTAACTAAGTACTATTAAGATTTACTTGTTCCTCCTCAGGCAACTTTTCAACTTTAGGGAGAGACACTTTGTTGATTTTGGATGAAAAAAATTAGATCCATTAATTTCCTAAGTTCTACTCACTTTTTCCATTTTAATCCGTTTTTCTAAGTTATTCTCACTTTCCTTCCATCCGTTTTTCTAAATTCTACTCAATTTTACTTTTTGAGGGACCCAATTGTAGGTACTCCGTACTAATTCTCTTATTTCCTATTTATTTGATTTCCTCCTAAAAAAAAGTACCACATGAGTGGTTTCCCTCTCGAGTTCTCCTTTGTTTTTGTTGTTACGATAATCCTAATTGTCAAGGAATTCAAACAATTCATCCTAGGTAAAGGCTAACGAGAAAAGTGTAATCATGTCACGTCCTTTCTTTTCCGTTCCTTCTTCCACTAATAATCCATATACAAGCCTTTTTATCTCCTTCGAAATTAGTGGTTGTGCCAACAAGTAATCACTGTTCTTCGAGTCCGGATCCTTTAGAGTTTTAATAAAACTCTACAAGGTAGAGTTGTATCTAAACCATACATTTTAAAATCAATGGCTCATATTGATGAGAAAAAATAGGGGAATTTTGGAAAGATAATATATGAACCATTGATTTTTCATTCAATGGTTGATATTGTTCAAAGTCTACCTTGTAGAGTTATTTAAGAACTCTAGAGGATCCAAAACCCTGTTTTTCCCTTTATCTTGATCACTACCTGTTTTTCTATCTCTCCCTTTTACGTTTCAAAATTGATTTCTACATAATTAAAACTATTCTAACGGTTAATATTGGTAGATAAGCATACTGTTCGAATTTGTAGGAGCCAGTGAGTCACCATATGAAGAAGGAAATTTGGATCAAAGTTTTTCTTCTGTAGCCATTTTCATCTAACATACTATTTTCTTCAGAATAATAGAATATACACATGAATAGTTTCAGTAGTAGAATGATATGCCTTCCTAGTTTTTTTTTTAATGGTGATTCTTTTTCTTTGTATATTACTCCCTCTGTCTCTATTTGTTGTTCCTAGTTGGAATACAGGAAGAGACCTTGAAAAGTAGATAAAAATATAATAAAAATAGGTAAGTGAAGTTAATGGGGGTAAGTGGGATCCATTTGGTAAATGGGGTAAATAATGATAATAAAGGGGGGGTGGAAGGAGTGCGTGGAGGTAAGTAGGAGTAGGACCCATTGGGTGGGGTATTTGGCCTTAAAATAAGGAGAAATGCTGGCCTTATAAGGAAATATTCTAAATAAGAAATTGAATTTGATACAGATTATATAGGAAAGTAGAAAAACCAGATAGAAATAGAGGAACTAATTTATTTTTTTCCTTTTAGGTTATGCTTGAAATGGGGATAGAAAATGAAAATAAATATGAATAGTTGTAGGGAGAGATGAGATAGTGATAAGAATAGAGAATGAGTTAGTGATGGTGTGATGAGAAGGACAGGAGGGGAATACTTACCCTCATTTTGGGGTTAAAGTTACCATATGGTGGGGGTGGTTAACTATTACCCTCACAATGAGGGTTATCCCCTTATCCATCTCTATTTCTCATCCACAACTAGCTTATTTACTTTATCACCACCTCATCCTCTTTAACATCATCTTCATTCACCTTCATTTTTCCAAGTTTGACTTTTATTACCCTCTTAATGCATTATCCTCATCCAAGATTCCAAGCATGCCTTTAAATTGGAAACTGATATAAAGAGACTTACTAGGGGCCGTTAAACCAAACAATACCAAACTAACAAAGTACATAATAAAATGACTGAACCATGAACCGCCTAAACAAACAACACAAAAAATCCATGATGTCGAGATTGTAGTTTTAGGTGTTCAAAGTAGCGAGGGAGACAAACCTTTCAGCAAGAAGTTCTTTTCACATTCATATTGCTGATTTTCCGCTTTATATGCCTAAAATTCCTACTACAACAATCAATGAGTTTCTACACGGTTTTAGGTTAATCCTTTTTGTTGATTTCCTTTGTTGAGTCTATTTATTTACTGCAGCCCACAGGTTCATTCTTTTTGTAAATTTTTTCTTCTTGTCATTTTCCATTTTGAACTTCTTCTCCACATCTTTTTACAGTTATAAATTTCCTGTTCTTTTTATTACTCTGTACAATTGTTAGTATGGTTTGGATATATTTTTGAAAATTTTATCCTAACTAATGCCATTCCGCTTTTAATAATCCCAACTATTTCATATCTCACAAATTCACAACAATCCCTACTACTTGGGGTGTCTTCCAAAAGTGCCTTGGTGACCTAAAGAAATCGGTTACTAGTGAATGATGTTTCAAGCTCTTATTGGTCAATTGTAGCAAACTATAGGTATATTTTGTGGGAAGATAAGGCCCATGGTGCTAGACCAGCTCTTCTTGTTGGAAAGTTGGTTGATAGACATTAGAATCTAGGCGGTCTTTGTATCAATGATTGTTTTTCTTGGAATTGTTACCATGAGTATGTCTCTTGGAATTTTTACCATGAGTATGTCTGAAATTTGAAGTTTATATCTGGCCTTAGGCTCTTAGATTTCAGCGTGTTAGTGTTCTAGTTGTTTATGACCTTAGTGGGTATTGACGCCTGCACTGCCAACATTCTCTTACCATGCGCAGACATTTAATTTACTTAAATTGTGTTCTGAAGGTGCCATAGAAGCTCAAACTGCCCAATGTGTTGGCGACCAATCAGCCTGAAAGATGAAGCAAGGTTTCTAGCTCCTGCTTTTTTGCACATTGAATTTTCATTTGTGCAATCTTTTGTTTGTTTATTTGATGGACACTTTTTCTGCATCTTGGAGTAGTCAGCAATTGCTGGAATCTGTGGAACATGAGAGGAGTCTCAGAGCTAATAGATCGAGGAATCGGACATCATTCTACCATCCCAGCCTTGAGAATCTTGAAGTTCATGTTTGTTTTCTATCAGCCTGCCTTGTTTTTTTCCTTGTTTAATCTTTTCTTCTAAATGTATTTGACTTCAGTTTGTCTTATATCATGGAAATATCTCTGAACACTGGCAGTTACCTACGGATGTTGGTGAAGTTGATCTTGAAGAGCATATATTTCAACACTTGGCTGCTGCAGCTGCCATGAGAAGTGGACATCTTGTTTTCCGGAGGGAAGGCCAAAGGAGCTGGTCGTCTTCATCGGGACATCATCCGTTCTTTGTTTTCTCATCTTCTAATGCTCTTCATGATGGTTCTATTTTGAATTCTATGAATCCTGTTGGAGATGAAAGTCATTCTCCTTCAGTGTCTCTAGGAAGTGCTACCATACTGAGCCGGAGTAGTTCAGATGCTCCAGTGCCAGTCTCACTTCCTCCACCACAAACTGATGAGGGTTATGCTCATAGGATTCGATCTAATTTTGCATCAGCAAATCGACAAAGTGTTTTATCAGAAACTCGGTATACATCTAATTCCCTGTTATTGCTTTTGGATTCTTATACATGTATTGGCTGGCTAAGTTACTGTGTTTTTTACTATGACTTTCATGTTTATCTCTCCCTGTCTAGAAGCCTTGGTAGTCAATCTTTCATGAGAAGTCAGAACACGGCAGAACAATCAGAGCTGCAGTCAGAATCTTTAAGATCTCGCTTTAATTCCTGGTCAATGAGGTATTATTTCACAGATTTTGCAGTTCCGTAAAAACATATTGGAGCTACCGCGCGAGATTCTGTTTCAGCATCTTGAAGCTAACAATTTGTTATTGTAAAGGTACAAGGAATGTATATCGAGGAATACTAGAGGCTGGAAGGAGAGGCTATTTGCTCGCAGCACATCCATGGCCGAGCTTGGTACTGAGGTTCGCAGAGAGGTGAATTCTGGGATTGCTCGCATGATGGAAAGACTTGATAGCAGAATGAATAATGGATCTGATCGTGCTTCCCAATCAAGTCATGCAGGTAGGACCACCACAAATGATTACTCAAATGACTGATCGCCAGATGTCAGCTCCTTATGCTACAAGTTCAGTCTCAGATTAAGCTTCCTTGTTGTTCAGAACTTTTATACCTTTTATTCTTCATGGTAAGCCTTCACTTTGTATTTAGTTATGAAGTTGAATTTTCTATCGTTCTTTCGTCAAGTTTCCCCTCTTTCTAGCAGTGAATTCTTGTGGTAGTTGTTTTCTCTCCCAGTTTGCCTTATTTTTGTGCGGTTAAACATTTGAAGTTACCAGTTATTTCGGGTATGAAACGATGCCATGATGATGGCATAAGTGTCCTTGGTGTCTTGAGTTCCGGCCGTGTATCATGTATGGTGCCTGCAAGATGAACTCCGGGCCCTCGAGGGGATCCCCGAGGCGGAGCCTCCGACGCTAAAGCCAGTACAATTGATAGTATTTTGGGGAGAGAGAGAGTAAGATGGCTTCTCTAGGGTTAGAGAATGACGTCTTTTACCTTGCCCCATGTGGGGTATATCCGTATATATAGTGGTCCTGTTGGGCCTTTGGGGCTCTTTAAGCTTTCTGAGTGATATTGGGCTTGAGTGGGTCTCATTAGCTTTGGGCTAAAATAGTATGCCTATTTTAGCACCCAAACACCAGTAGCTTGGAAAGCCTGTGTGAAGTTGACATTTTATTTAGGAGGTGGCATTATTCATGTCAGTGCTAAAATTATATAGTGATCTTTGTGTAAGGTATCATGACTTGTGTCAAGCATCCTCTACTACTGGGTAAAAATAGATTACAATCTTAAGATAGACCGATGTTGATGTAGTAGAAGACGCGAAATGGAATATTGCAAAATACTCTTGTGTGTTAGTGAACCATAAATAGCCAGTTAATTGAACCCCTCTACTACTAATATAATTGAGCAAACCCCTCTGACTGTTCGGAGTCAAGTACTCACAAATTCACAGTACATGTACTTGAAAATATTGTTGCTCCGTTGCCGCCAATACCTCTCAGAGATATAATGACTGCTGGGAGCAGCTAACGTCGTGTATTTTATCTGAAAGCTCTAGCTCTAGCTCTAGTGGCGCTTCATAATCAATTATGAAGTACATGATTTACATCATTGCCATATGTAATGACCATATTGAGTATAGTTTTTAAGCGCGCTTGTAATGCATGTAATATTGTATGTTCCCTGAAGACACTGATGCAAATCATTTCTGCTGTGGGGATTTTTCAACCTTACGTTTAGTCACATTATTATTGAGTTCTGAAACATTATGGACTTCTTGATCGAGCAGAGATATGGCCTGTTCAAATTGCAATATTTTGTCTTTATTTTTTTATTTATTTATTGTCTAAAATAACATTCACTAGGAAATAAAATTACCCTTTTGATTTTTGTGACATTAGGTTTGTTGGGTCAGAAAAAAATTTACAATTTTGTGTGTGTTTTTGTTTTGTTTTCAGGTGACGGAAATCTTGTTTTGTACTGTGCTGAACTTTATTCCATTATGGAACGATCAAAGATCGTATAATCAATTGTTTGAAGACCATCTATGTATATTATGTATGTATGTATGTATATATTGATTAAAACAGACAATTCTTGGGAAGTCGCCTCCATAATCTGATATATGGATGCTTGTAAATCTATGAATGCAACTTATGTAATGAAGCACAAGAAATTCTTTCGCCTTCTAATCATTGTAGAGTGGACTAGTGGATTATATATCATTGCCATTCTTCATTTCTTTGTGTCTGAAAATTAGACTACAATCTAGGCGATCTTACAGAGGATAACCCAG

mRNA sequence

ATGGCTTTTTCAATGCAACTTTATGGAATGGACACTGTTAGGGAGAGTTATGATCATTCAACGAATATTGGAACCTTTCTAGAAGGTGAAATGCAAGGAGCATGTGATGATGCCTGCAGCATATGCCTTGAAGATTTTTCTGAAAGTGATCCTTCAACGACGCTATTCACGGGGTTGCACATAATGGGAATTGTTCTAGTCGAGATAAAAGAAAATTACTGTGATCCTGAGCAATTGCTGGAATCTGTGGAACATGAGAGGAGTCTCAGAGCTAATAGATCGAGGAATCGGACATCATTCTACCATCCCAGCCTTGAGAATCTTGAAGTTCATTTTGTCTTATATCATGGAAATATCTCTGAACACTGGCAGTTACCTACGGATGTTGGTGAAGTTGATCTTGAAGAGCATATATTTCAACACTTGGCTGCTGCAGCTGCCATGAGAAGTGGACATCTTGTTTTCCGGAGGGAAGGCCAAAGGAGCTGGTCGTCTTCATCGGGACATCATCCGTTCTTTGTTTTCTCATCTTCTAATGCTCTTCATGATGGTTCTATTTTGAATTCTATGAATCCTGTTGGAGATGAAAGTCATTCTCCTTCAGTGTCTCTAGGAAGTGCTACCATACTGAGCCGGAGTAGTTCAGATGCTCCAGTGCCAGTCTCACTTCCTCCACCACAAACTGATGAGGGTTATGCTCATAGGATTCGATCTAATTTTGCATCAGCAAATCGACAAAGTGTTTTATCAGAAACTCGAAGCCTTGGTAGTCAATCTTTCATGAGAAGTCAGAACACGGCAGAACAATCAGAGCTGCAGTCAGAATCTTTAAGATCTCGCTTTAATTCCTGGTCAATGAGGTACAAGGAATGTATATCGAGGAATACTAGAGGCTGGAAGGAGAGGCTATTTGCTCGCAGCACATCCATGGCCGAGCTTGGTACTGAGGTTCGCAGAGAGGTGAATTCTGGGATTGCTCGCATGATGGAAAGACTTGATAGCAGAATGAATAATGGATCTGATCGTGCTTCCCAATCAAGTCATGCAGGTGACGGAAATCTTGTTTTGTACTGTGCTGAACTTTATTCCATTATGGAACGATCAAAGATCGTATAATCAATTGTTTGAAGACCATCTATGTATATTATGTATGTATGTATGTATATATTGATTAAAACAGACAATTCTTGGGAAGTCGCCTCCATAATCTGATATATGGATGCTTGTAAATCTATGAATGCAACTTATGTAATGAAGCACAAGAAATTCTTTCGCCTTCTAATCATTGTAGAGTGGACTAGTGGATTATATATCATTGCCATTCTTCATTTCTTTGTGTCTGAAAATTAGACTACAATCTAGGCGATCTTACAGAGGATAACCCAG

Coding sequence (CDS)

ATGGCTTTTTCAATGCAACTTTATGGAATGGACACTGTTAGGGAGAGTTATGATCATTCAACGAATATTGGAACCTTTCTAGAAGGTGAAATGCAAGGAGCATGTGATGATGCCTGCAGCATATGCCTTGAAGATTTTTCTGAAAGTGATCCTTCAACGACGCTATTCACGGGGTTGCACATAATGGGAATTGTTCTAGTCGAGATAAAAGAAAATTACTGTGATCCTGAGCAATTGCTGGAATCTGTGGAACATGAGAGGAGTCTCAGAGCTAATAGATCGAGGAATCGGACATCATTCTACCATCCCAGCCTTGAGAATCTTGAAGTTCATTTTGTCTTATATCATGGAAATATCTCTGAACACTGGCAGTTACCTACGGATGTTGGTGAAGTTGATCTTGAAGAGCATATATTTCAACACTTGGCTGCTGCAGCTGCCATGAGAAGTGGACATCTTGTTTTCCGGAGGGAAGGCCAAAGGAGCTGGTCGTCTTCATCGGGACATCATCCGTTCTTTGTTTTCTCATCTTCTAATGCTCTTCATGATGGTTCTATTTTGAATTCTATGAATCCTGTTGGAGATGAAAGTCATTCTCCTTCAGTGTCTCTAGGAAGTGCTACCATACTGAGCCGGAGTAGTTCAGATGCTCCAGTGCCAGTCTCACTTCCTCCACCACAAACTGATGAGGGTTATGCTCATAGGATTCGATCTAATTTTGCATCAGCAAATCGACAAAGTGTTTTATCAGAAACTCGAAGCCTTGGTAGTCAATCTTTCATGAGAAGTCAGAACACGGCAGAACAATCAGAGCTGCAGTCAGAATCTTTAAGATCTCGCTTTAATTCCTGGTCAATGAGGTACAAGGAATGTATATCGAGGAATACTAGAGGCTGGAAGGAGAGGCTATTTGCTCGCAGCACATCCATGGCCGAGCTTGGTACTGAGGTTCGCAGAGAGGTGAATTCTGGGATTGCTCGCATGATGGAAAGACTTGATAGCAGAATGAATAATGGATCTGATCGTGCTTCCCAATCAAGTCATGCAGGTGACGGAAATCTTGTTTTGTACTGTGCTGAACTTTATTCCATTATGGAACGATCAAAGATCGTATAA

Protein sequence

MAFSMQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFTGLHIMGIVLVEIKENYCDPEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAGDGNLVLYCAELYSIMERSKIV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo16799	Spo16799	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo16799.1	Spo16799.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16799.1.CDS.8	Spo16799.1.CDS.8	CDS
Spo16799.1.CDS.7	Spo16799.1.CDS.7	CDS
Spo16799.1.CDS.6	Spo16799.1.CDS.6	CDS
Spo16799.1.CDS.5	Spo16799.1.CDS.5	CDS
Spo16799.1.CDS.4	Spo16799.1.CDS.4	CDS
Spo16799.1.CDS.3	Spo16799.1.CDS.3	CDS
Spo16799.1.CDS.2	Spo16799.1.CDS.2	CDS
Spo16799.1.CDS.1	Spo16799.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16799.1.utr3p.1	Spo16799.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo16799.1.exon.8	Spo16799.1.exon.8	exon
Spo16799.1.exon.7	Spo16799.1.exon.7	exon
Spo16799.1.exon.6	Spo16799.1.exon.6	exon
Spo16799.1.exon.5	Spo16799.1.exon.5	exon
Spo16799.1.exon.4	Spo16799.1.exon.4	exon
Spo16799.1.exon.3	Spo16799.1.exon.3	exon
Spo16799.1.exon.2	Spo16799.1.exon.2	exon
Spo16799.1.exon.1	Spo16799.1.exon.1	exon

Homology

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|902146441|gb|KNA05058.1| (hypothetical protein SOVF_193840 isoform A [Spinacia oleracea])

HSP 1 Score: 568.9 bits (1465), Expect = 6.400e-159
Identity = 309/359 (86.07%), Postives = 315/359 (87.74%), Query Frame = 1


		  
Query: 6   QLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMG 65
           +L GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPST        H+  
Sbjct: 146 ELSGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTVTDCKHEFHLHC 205

Query: 66  IVLVEIKENYCD------------PEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 125
           I+    + + C              +QLLESVEHERSLRANRSRNRTSFYHPSLENLEVH
Sbjct: 206 ILEWCHRSSNCPMCWRPISLKDEASQQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 265

Query: 126 FVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 185
                        LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP
Sbjct: 266 -------------LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 325

Query: 186 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 245
           FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG
Sbjct: 326 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 385

Query: 246 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 305
           YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC
Sbjct: 386 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 445

Query: 306 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 351
           ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG
Sbjct: 446 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 491

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|902146442|gb|KNA05059.1| (hypothetical protein SOVF_193840 isoform B [Spinacia oleracea])

HSP 1 Score: 563.1 bits (1450), Expect = 3.500e-157
Identity = 308/359 (85.79%), Postives = 314/359 (87.47%), Query Frame = 1


		  
Query: 6   QLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMG 65
           +L GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPST        H+  
Sbjct: 146 ELSGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTVTDCKHEFHLHC 205

Query: 66  IVLVEIKENYCD------------PEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 125
           I+    + + C              +QLLESVEHERSLRANRSRNRTSFYHPSLENLEVH
Sbjct: 206 ILEWCHRSSNCPMCWRPISLKDEASQQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 265

Query: 126 FVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 185
                        LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP
Sbjct: 266 -------------LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 325

Query: 186 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 245
           FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG
Sbjct: 326 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 385

Query: 246 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 305
           YAHRIRSNFASANRQSVLSETR LGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC
Sbjct: 386 YAHRIRSNFASANRQSVLSETR-LGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 445

Query: 306 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 351
           ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG
Sbjct: 446 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 490

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|359481051|ref|XP_002270570.2| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Vitis vinifera])

HSP 1 Score: 226.1 bits (575), Expect = 1.000e-55
Identity = 164/370 (44.32%), Postives = 219/370 (59.19%), Query Frame = 1


		  
Query: 5   MQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPS--TTLFTGLHIM 64
           M++ GM+ V+ S +H T+   F+EG +Q ACDDACSICLE F +SDPS  T+     H+ 
Sbjct: 1   MEVEGMEEVKNSENHMTSAAAFVEGGVQEACDDACSICLEAFCDSDPSTLTSCKHEFHLQ 60

Query: 65  GIVLVEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEV 124
            I+    + + C          DP  ++LLE+VE ER++R    R+   F+HP+L + E+
Sbjct: 61  CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRS-AIFHHPTLGDFEL 120

Query: 125 HFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHH 184
                         LP    + +LEE I QHLAAAAAM   H + RREGQRS SS+ G  
Sbjct: 121 Q------------HLPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRS 180

Query: 185 PFFVFSS-SNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAP---VPVSLPPP 244
            F VFS+  NA   G +  S+  VG E+   ++++ S +I   +  D P   +P   P  
Sbjct: 181 HFLVFSTHPNATASGPVPASLVQVG-ENEPAAITVASPSIPLPAGGDEPSQEIP-QFPSV 240

Query: 245 QTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSW 304
           QTD   A   RS   +   + +    RS  SQS    Q+ A  SELQ  SESL+SR N+ 
Sbjct: 241 QTDHMSASASRS---AVTPRRISFNNRSSASQSSPPDQDRAGPSELQSFSESLKSRLNAV 300

Query: 305 SMRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSD 352
           SMRYKE IS++TRGWKERLF+R+ SMA+LG+EVRREVN+GIA   RMMERLD+R NNG+ 
Sbjct: 301 SMRYKESISKSTRGWKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLDTRENNGAG 352

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|731398415|ref|XP_010653244.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Vitis vinifera])

HSP 1 Score: 223.0 bits (567), Expect = 8.600e-55
Identity = 164/370 (44.32%), Postives = 217/370 (58.65%), Query Frame = 1


		  
Query: 5   MQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPS--TTLFTGLHIM 64
           M++ GM+ V+ S +H T+   F+EG +Q ACDDACSICLE F +SDPS  T+     H+ 
Sbjct: 1   MEVEGMEEVKNSENHMTSAAAFVEGGVQEACDDACSICLEAFCDSDPSTLTSCKHEFHLQ 60

Query: 65  GIVLVEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEV 124
            I+    + + C          DP  ++LLE+VE ER++R    R+   F+HP+L + E+
Sbjct: 61  CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRS-AIFHHPTLGDFEL 120

Query: 125 HFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHH 184
                         LP    + +LEE I QHLAAAAAM   H + RREGQRS SS+ G  
Sbjct: 121 Q------------HLPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRS 180

Query: 185 PFFVFSS-SNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAP---VPVSLPPP 244
            F VFS+  NA   G +  S+  VG E+   ++++ S +I   +  D P   +P   P  
Sbjct: 181 HFLVFSTHPNATASGPVPASLVQVG-ENEPAAITVASPSIPLPAGGDEPSQEIP-QFPSV 240

Query: 245 QTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSW 304
           QTD    H   S   SA     +S      SQS    Q+ A  SELQ  SESL+SR N+ 
Sbjct: 241 QTD----HMSASASRSAVTPRRISFNNRSASQSSPPDQDRAGPSELQSFSESLKSRLNAV 300

Query: 305 SMRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSD 352
           SMRYKE IS++TRGWKERLF+R+ SMA+LG+EVRREVN+GIA   RMMERLD+R NNG+ 
Sbjct: 301 SMRYKESISKSTRGWKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLDTRENNGAG 351

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|566209079|ref|XP_002322768.2| (hypothetical protein POPTR_0016s06670g [Populus trichocarpa])

HSP 1 Score: 221.5 bits (563), Expect = 2.500e-54
Identity = 157/369 (42.55%), Postives = 214/369 (57.99%), Query Frame = 1


		  
Query: 5   MQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIM 64
           M++  MD  ++   H T+   F+EG +Q +CDDACSICLE+F ESDPST        H+ 
Sbjct: 1   MEVLEMDEAKKPEVHMTSAAAFVEGGIQDSCDDACSICLEEFCESDPSTVTNCKHEFHLQ 60

Query: 65  GIVLVEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEV 124
            I+    + + C          DP  ++L E+VE ER +RA  SRN T F+HP+L + E+
Sbjct: 61  CILEWCQRSSECPMCLQSISLKDPTSQELFEAVERERKIRAAPSRNATIFHHPTLGDFEL 120

Query: 125 HFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHH 184
                         LP  V + +LEE I QHLAAAAAM       RREGQR+ +SS G  
Sbjct: 121 Q------------HLPVGVSDSELEERIIQHLAAAAAMGRTRHFGRREGQRNRTSSHGRP 180

Query: 185 PFFVFSS-SNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQ-- 244
            F VFS+   A   G + +S+  +G E+    VS+ S +    S  D P   +L  P   
Sbjct: 181 HFLVFSTHPGAQPSGHVSSSLTQLGGENEPAPVSVASPSTQLTSVGDEPPQQALQSPSVL 240

Query: 245 TDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSWS 304
           TD+  +    S    AN Q V    RS  SQS + +Q+ A  SELQ  SESL+SR N+ S
Sbjct: 241 TDQS-SSASGSTAMPANNQGVSFNNRSASSQSSLPNQDRAGPSELQSFSESLKSRLNAVS 300

Query: 305 MRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDR 352
           MRYKE ISR+TRGWKERLF+R++SM+++ ++VRREVN+GIA   RMMERL++R + G ++
Sbjct: 301 MRYKESISRSTRGWKERLFSRNSSMSDISSDVRREVNAGIATVSRMMERLETRDDGGDNQ 356

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QED6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193840 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 4.400e-159
Identity = 309/359 (86.07%), Postives = 315/359 (87.74%), Query Frame = 1


		  
Query: 6   QLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMG 65
           +L GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPST        H+  
Sbjct: 146 ELSGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTVTDCKHEFHLHC 205

Query: 66  IVLVEIKENYCD------------PEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 125
           I+    + + C              +QLLESVEHERSLRANRSRNRTSFYHPSLENLEVH
Sbjct: 206 ILEWCHRSSNCPMCWRPISLKDEASQQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 265

Query: 126 FVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 185
                        LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP
Sbjct: 266 -------------LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 325

Query: 186 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 245
           FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG
Sbjct: 326 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 385

Query: 246 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 305
           YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC
Sbjct: 386 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 445

Query: 306 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 351
           ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG
Sbjct: 446 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 491

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCR0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193840 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 2.400e-157
Identity = 308/359 (85.79%), Postives = 314/359 (87.47%), Query Frame = 1


		  
Query: 6   QLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMG 65
           +L GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPST        H+  
Sbjct: 146 ELSGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTVTDCKHEFHLHC 205

Query: 66  IVLVEIKENYCD------------PEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 125
           I+    + + C              +QLLESVEHERSLRANRSRNRTSFYHPSLENLEVH
Sbjct: 206 ILEWCHRSSNCPMCWRPISLKDEASQQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 265

Query: 126 FVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 185
                        LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP
Sbjct: 266 -------------LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 325

Query: 186 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 245
           FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG
Sbjct: 326 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 385

Query: 246 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 305
           YAHRIRSNFASANRQSVLSETR LGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC
Sbjct: 386 YAHRIRSNFASANRQSVLSETR-LGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 445

Query: 306 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 351
           ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG
Sbjct: 446 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 490

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: B9IIH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06670g PE=4 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 1.700e-54
Identity = 157/369 (42.55%), Postives = 214/369 (57.99%), Query Frame = 1


		  
Query: 5   MQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIM 64
           M++  MD  ++   H T+   F+EG +Q +CDDACSICLE+F ESDPST        H+ 
Sbjct: 1   MEVLEMDEAKKPEVHMTSAAAFVEGGIQDSCDDACSICLEEFCESDPSTVTNCKHEFHLQ 60

Query: 65  GIVLVEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEV 124
            I+    + + C          DP  ++L E+VE ER +RA  SRN T F+HP+L + E+
Sbjct: 61  CILEWCQRSSECPMCLQSISLKDPTSQELFEAVERERKIRAAPSRNATIFHHPTLGDFEL 120

Query: 125 HFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHH 184
                         LP  V + +LEE I QHLAAAAAM       RREGQR+ +SS G  
Sbjct: 121 Q------------HLPVGVSDSELEERIIQHLAAAAAMGRTRHFGRREGQRNRTSSHGRP 180

Query: 185 PFFVFSS-SNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQ-- 244
            F VFS+   A   G + +S+  +G E+    VS+ S +    S  D P   +L  P   
Sbjct: 181 HFLVFSTHPGAQPSGHVSSSLTQLGGENEPAPVSVASPSTQLTSVGDEPPQQALQSPSVL 240

Query: 245 TDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSWS 304
           TD+  +    S    AN Q V    RS  SQS + +Q+ A  SELQ  SESL+SR N+ S
Sbjct: 241 TDQS-SSASGSTAMPANNQGVSFNNRSASSQSSLPNQDRAGPSELQSFSESLKSRLNAVS 300

Query: 305 MRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDR 352
           MRYKE ISR+TRGWKERLF+R++SM+++ ++VRREVN+GIA   RMMERL++R + G ++
Sbjct: 301 MRYKESISRSTRGWKERLFSRNSSMSDISSDVRREVNAGIATVSRMMERLETRDDGGDNQ 356

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: W9R7D9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017147 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.800e-52
Identity = 153/347 (44.09%), Postives = 204/347 (58.79%), Query Frame = 1


		  
Query: 9   GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFTGLHIMGIVLVE 68
           GM+ +++S  H T+   F+EG +Q ACDDACSICLE F +SDPST            ++E
Sbjct: 121 GMEEIKKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILE 180

Query: 69  IKENYCDPEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISEHWQLPTD 128
            +E       LLE+VE ERS R N SRN T F+HP+L + E+              LP  
Sbjct: 181 CQE-------LLEAVERERSFRFNPSRNATIFHHPTLGDFELQ------------HLPVG 240

Query: 129 VGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSS-NALHDGSIL 188
             + +LEE I QHLAAAAAM     + RREGQR+ +S+ G   F VFS+  NA       
Sbjct: 241 ASDAELEERIIQHLAAAAAMGRARHISRREGQRNRASAQGRPQFLVFSTHPNAPSATPAS 300

Query: 189 NSMNPVGDESHSPS--VSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFASANR 248
           +S +  G+    P+  V+L   +     SS      SLP  Q +   A    S+  +  +
Sbjct: 301 SSPDQSGEAEPIPAITVALPYPSNAGEESSQQTASSSLPSSQAEPVSASASGSSVVANQQ 360

Query: 249 QSVLSETRSLGSQSFMRSQNTAEQSELQS--ESLRSRFNSWSMRYKECISRNTRGWKERL 308
            S LS  RS  SQS   SQ+ A  S+ QS  ESL+SRFN+ SMRYKE IS++TRGWKERL
Sbjct: 361 GSSLSNRRS-SSQSSPSSQDRAGPSDFQSFSESLKSRFNAVSMRYKESISKSTRGWKERL 420

Query: 309 FARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDRASQSS 348
           F+R+TSM++LG+EV+REVN+GIA   RMMERL++R N+ +  AS S+
Sbjct: 421 FSRNTSMSDLGSEVKREVNAGIATVSRMMERLETRDNSRTSDASVSN 447

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RPT0_GLYSO (E3 ubiquitin-protein ligase RHF2A OS=Glycine soja GN=glysoja_001247 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.800e-51
Identity = 147/360 (40.83%), Postives = 207/360 (57.50%), Query Frame = 1


		  
Query: 15  ESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMGIVLVEIKEN 74
           +S  H T+   F+EG +Q ACDDACSICLE F +SDPST        H+  I+    + +
Sbjct: 17  KSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSS 76

Query: 75  YC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNIS 134
            C          DP  ++LLE+VE ER+ R N SRN T F+HP+L + E+          
Sbjct: 77  QCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQ--------- 136

Query: 135 EHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSS-SN 194
               LP    + DLEE I QHLAAAAAM     V RREGQR+ SS+ G   F VFS+  N
Sbjct: 137 ---HLPVGASDADLEERIIQHLAAAAAMGRARHVARREGQRNRSSAQGRQHFLVFSTHPN 196

Query: 195 ALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSN 254
           +       +S +  GD+  +P++ + + +    +  ++  P  +PP Q ++  A    + 
Sbjct: 197 SPPMAPASSSPSQRGDDEPTPTIDVANLSPTPATGEESSQPTLVPPVQAEQVSASGSGTT 256

Query: 255 FASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSWSMRYKECISRNTR 314
             + + Q      R   +QS   SQ+ A  SELQ  SESL+S+ N+ S RYKE IS++TR
Sbjct: 257 ALATDHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTR 316

Query: 315 GWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDRASQSSHAGDGNL 355
           GWKER F+R+ +M++LG+EVRREVN+GIA   RMMERL++R NN S+  S  S+  DG++
Sbjct: 317 GWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLETRDNNRSNSNSAPSNIEDGSV 364

[Close]

BLAST of Spo16799.1 vs. ExPASy Swiss-Prot
Match: RHF2A_ARATH (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.500e-46
Identity = 151/362 (41.71%), Postives = 196/362 (54.14%), Query Frame = 1


		  
Query: 9   GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPS--TTLFTGLHIMGIVL 68
           G      S  H T+   F+EG +Q ACDDACSICLE F ESDPS  T+     H+  I+ 
Sbjct: 3   GAGETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILE 62

Query: 69  VEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVL 128
              + + C          DP  ++LLE+VE ER+ R N +RN T F HP+L + E+    
Sbjct: 63  WCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQ--- 122

Query: 129 YHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFV 188
                     LP  V   ++EE I QHLAAAAAM       RREG RS SSS GH  F V
Sbjct: 123 ---------HLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMV 182

Query: 189 FSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEGYAH 248
           FSS          N+ +P     H P  S  S     R  SD     +LP     EG +H
Sbjct: 183 FSSQP--------NASSP---PPHPPMPSSPS----QRDESD--TVSNLPHNALGEG-SH 242

Query: 249 RIRSNFASANRQSVLSETRSLG-----SQSFMRSQNTAEQSELQ--SESLRSRFNSWSMR 308
           +  +   +++    +S + S       +QS    Q+ A  SELQ  SESL+SR N+ S R
Sbjct: 243 QSNTQPPTSSHPRQVSPSASDSNSRPLNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTR 302

Query: 309 YKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDRAS 347
           YKE IS+NTR WK+RLF+R+TSMA+LG+EV+REV++GIA   RMMERL++R N+    AS
Sbjct: 303 YKESISKNTRNWKDRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTAS 334

[Close]

BLAST of Spo16799.1 vs. ExPASy Swiss-Prot
Match: RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.100e-12
Identity = 108/336 (32.14%), Postives = 160/336 (47.62%), Query Frame = 1


		  
Query: 36  DDACSICLEDFSESDPSTTLFT--GLHIMGIVLVEIKENYC----------DP--EQLLE 95
           DDACSICLE F+  DPST        H+  I+    +   C          DP  ++LL 
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLA 102

Query: 96  SVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISEHWQLPTDVGEVDLEEHIFQH 155
           +VE ER L   ++RN +S    S+ +    F   H    E  Q  +       +E   +H
Sbjct: 103 AVEKERLL---KTRNISSSSPISIHHSHDDF---HSE-EEESQFSS------FDEQFLRH 162

Query: 156 LAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSSNALHDGSILNSMNPVGDESHSPS 215
           L  AA  R   L+ RR+GQ S S  S   P  +  +   L +   L++++ V  ++ +P 
Sbjct: 163 LTEAAHRRC--LLRRRDGQISSSLVSSSDPTTIHPTD--LVNLYRLSAISHVEHQNSNPC 222

Query: 216 VSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFM 275
            S GS T         P PVS        G++    S  A +N  S +S   S    S  
Sbjct: 223 PSPGSMT---------PSPVS--------GHS----SIPADSNNGSRISPGPSPSRSS-- 282

Query: 276 RSQNTAEQSELQSESLRSRFNSWSMRYKECISRNTRGWKERLFARSTSMAELGTEVRREV 335
           +S  + E S L  E+++S+  + S +YKE IS++ +G KE+L AR+ S+ EL   V+RE+
Sbjct: 283 QSPKSPEASSL-PEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREM 337

Query: 336 NSGI---ARMMERLD--SRMNNGSDRASQSSHAGDG 353
           N+GI   ARM+ER+D  S+   GS   S S+    G
Sbjct: 343 NAGIAGVARMIERMDFSSKRFGGSAHVSTSTATASG 337

[Close]

BLAST of Spo16799.1 vs. TAIR (Arabidopsis)
Match: AT5G22000.2 (RING-H2 group F2A)

HSP 1 Score: 186.8 bits (473), Expect = 2.400e-47
Identity = 150/355 (42.25%), Postives = 195/355 (54.93%), Query Frame = 1


		  
Query: 16  SYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPS--TTLFTGLHIMGIVLVEIKENY 75
           S  H T+   F+EG +Q ACDDACSICLE F ESDPS  T+     H+  I+    + + 
Sbjct: 10  SEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQ 69

Query: 76  C----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISE 135
           C          DP  ++LLE+VE ER+ R N +RN T F HP+L + E+           
Sbjct: 70  CPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQ---------- 129

Query: 136 HWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSSNAL 195
              LP  V   ++EE I QHLAAAAAM       RREG RS SSS GH  F VFSS    
Sbjct: 130 --HLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQP-- 189

Query: 196 HDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFA 255
                 N+ +P     H P  S  S     R  SD     +LP     EG +H+  +   
Sbjct: 190 ------NASSP---PPHPPMPSSPS----QRDESD--TVSNLPHNALGEG-SHQSNTQPP 249

Query: 256 SANRQSVLSETRSLG-----SQSFMRSQNTAEQSELQ--SESLRSRFNSWSMRYKECISR 315
           +++    +S + S       +QS    Q+ A  SELQ  SESL+SR N+ S RYKE IS+
Sbjct: 250 TSSHPRQVSPSASDSNSRPLNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISK 309

Query: 316 NTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDRASQS 347
           NTR WK+RLF+R+TSMA+LG+EV+REV++GIA   RMMERL++R N+    AS S
Sbjct: 310 NTRNWKDRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVS 334

[Close]

BLAST of Spo16799.1 vs. TAIR (Arabidopsis)
Match: AT4G14220.1 (RING-H2 group F1A)

HSP 1 Score: 75.9 bits (185), Expect = 6.000e-14
Identity = 108/336 (32.14%), Postives = 160/336 (47.62%), Query Frame = 1


		  
Query: 36  DDACSICLEDFSESDPSTTLFT--GLHIMGIVLVEIKENYC----------DP--EQLLE 95
           DDACSICLE F+  DPST        H+  I+    +   C          DP  ++LL 
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLA 102

Query: 96  SVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISEHWQLPTDVGEVDLEEHIFQH 155
           +VE ER L   ++RN +S    S+ +    F   H    E  Q  +       +E   +H
Sbjct: 103 AVEKERLL---KTRNISSSSPISIHHSHDDF---HSE-EEESQFSS------FDEQFLRH 162

Query: 156 LAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSSNALHDGSILNSMNPVGDESHSPS 215
           L  AA  R   L+ RR+GQ S S  S   P  +  +   L +   L++++ V  ++ +P 
Sbjct: 163 LTEAAHRRC--LLRRRDGQISSSLVSSSDPTTIHPTD--LVNLYRLSAISHVEHQNSNPC 222

Query: 216 VSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFM 275
            S GS T         P PVS        G++    S  A +N  S +S   S    S  
Sbjct: 223 PSPGSMT---------PSPVS--------GHS----SIPADSNNGSRISPGPSPSRSS-- 282

Query: 276 RSQNTAEQSELQSESLRSRFNSWSMRYKECISRNTRGWKERLFARSTSMAELGTEVRREV 335
           +S  + E S L  E+++S+  + S +YKE IS++ +G KE+L AR+ S+ EL   V+RE+
Sbjct: 283 QSPKSPEASSL-PEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREM 337

Query: 336 NSGI---ARMMERLD--SRMNNGSDRASQSSHAGDG 353
           N+GI   ARM+ER+D  S+   GS   S S+    G
Sbjct: 343 NAGIAGVARMIERMDFSSKRFGGSAHVSTSTATASG 337

The following BLAST results are available for this feature:

BLAST of Spo16799.1 vs. NCBI nr
BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
BLAST of Spo16799.1 vs. ExPASy Swiss-Prot
BLAST of Spo16799.1 vs. TAIR (Arabidopsis)

BLAST of Spo16799.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902146441\|gb\|KNA05058.1\|	6.4e-159	86.0	hypothetical protein SOVF_1938...	[more]
gi\|902146442\|gb\|KNA05059.1\|	3.5e-157	85.7	hypothetical protein SOVF_1938...	[more]
gi\|359481051\|ref\|XP_002270570.2\|	1.0e-55	44.3	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|731398415\|ref\|XP_010653244.1\|	8.6e-55	44.3	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|566209079\|ref\|XP_002322768.2\|	2.5e-54	42.5	hypothetical protein POPTR_001...	[more]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QED6_SPIOL	4.4e-159	86.0	Uncharacterized protein OS=Spi...	[more]
A0A0K9QCR0_SPIOL	2.4e-157	85.7	Uncharacterized protein OS=Spi...	[more]
B9IIH4_POPTR	1.7e-54	42.5	Uncharacterized protein OS=Pop...	[more]
W9R7D9_9ROSA	2.8e-52	44.0	Uncharacterized protein OS=Mor...	[more]
A0A0B2RPT0_GLYSO	1.8e-51	40.8	E3 ubiquitin-protein ligase RH...	[more]

BLAST of Spo16799.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
RHF2A_ARATH	2.5e-46	41.7	E3 ubiquitin-protein ligase RH...	[more]
RHF1A_ARATH	1.1e-12	32.1	E3 ubiquitin-protein ligase RH...	[more]

BLAST of Spo16799.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G22000.2	2.4e-47	42.2	RING-H2 group F2A	[more]
AT4G14220.1	6.0e-14	32.1	RING-H2 group F1A	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 21..175 score: 5.1
None	No IPR available	PANTHER	PTHR22763:SF45	SUBFAMILY NOT NAMED	coord: 21..175 score: 5.1