Spo08861.1 (mRNA) | SpinachBase

Overview


Name	Spo08861.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	At2g20820/F5H14.21
Location	SpoScf_01862 : 52826 .. 57686 (-)
Sequence length	1316

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTTGATGGAAATAAAATACCCCCTCACTTTGAGGTTAGAACGTGAACCACCGTAAATCTCACCGCCCTCTCCATCTCCTCACTCGGTCTCTCCTCCCTTCGACACTTCTCTTTCGAAGTTCTCTCCTTCTTTCTCTCTCCTCAACAGCCATGGCGGCTCGTATTGTGGCGGCTGCTCGTCAAGCTGCATCCATCACCCGGATCTCCTCCGCTCAACCACCCCTTCCTCGGCTAGTTCAACGCCGTGGTTTTGCTGGCGCGGCCGGTAATTTTTCACTCTCTTATAAATGTCCTTGCAATTTTATTCCAATATTTCGATTTACAAATCATTTGTTTATTTCGATTTGATTTAATTCGATCTTGCTATTACCTACGTGTTTTAGGGTTCGGAATTTGTAGTTTCATTGTTTTTCGGTGATTTTTAGAAGAAAAAGTCAATCCGGTCTGAATAATCGTGGTATTTGGTAGAATATTTAGTGCAATATGTATGATGATCGTGAATTTTATAATTTAGGTGTGTTTTTTAATCGCATCAATTATTGCAACAAACGTAAACTGAATCTTCCTAAAGTCTTTATTTTGTTTGGTTTTTAGTTGAGTTTGGATTTATTTTGATGTAGAGAGAGCCGTAAAGGTAAATGAAGACCGAATTTGATCCAAGTCCACCTTCAAATTTTACCTAAGCTATTTGGGGGATCCACATTCCAGTTAAATATTTATATTAAGCAAAGAAGAATGTGAAATGTAGCTTTTTGATGTTGAACCTCATATCAGAAGGTTTTTATTTGTAGTATATTTTCCTCTTATTGGGTTGGTGTTTGTGTCTTTATTAGATATCACACATCACAGATGGCAGGCTTATTGTTGAACAATTTGAAGAGCTAGGCCACTAGGGTAAATTAGATTAACTACATTGAATACTTATTGAAACCCTTGTTTAGAACAATCCTTTACGTTTCTGGCCGTCTTTCGTATTCGAGCAGTTGTAACTTGTAAGTGTCACTTTTACAATGCATAGTGAGTTGTTGCCATAAATGACAAGTAAACTTAAGTTTCATATCAAGGAAACACGACTTGATTTTGACTATAGAGTTTGCTACGATGTGTGTTTAGTTATGAATATTTTCTCAAAATCCTTCTTTTCATGTTGAATCGCAATCTTCTCATGATAATTAGTTACCTGGTTTCCTGACTTAAACGTTGATATGTCTTTGGTTTTGTAATTCAAGATAAGTGAGAAGTACACTGGAATAGACCACAAAAATCCATTGCCACTTATAAATTGTTGTCAGCTTCTAAATTTTTATGTATGTGTTTCATGATGTGCTTGTATGATCCATTGCAGAACATGGGCCACAAAAGGTAAACTGCTGGCAAGAACCAAAGAATCCTGGTAACTGGAAGGAAGAACACGTGAGTCTCTAATCTGGAGTATTATATATCTTTCTTTTGTACTTCTATTACCAAGCCTGAAGTGATGTTCTTCGTATGTTTAAATGTAAATAATTACGGAAGTTACTTATAAATTGCCGTGTTGCCTGTTCTGGTTTGGTTCTTCAGTTTTATGTTTGATGATAGTCAATTGTTGAAAACCGCCTAACATGTGATGATATTGGAGCAGCTTATTTACTGATTTTGATTTGAATTTCTTGAACAAACTGAATGTATCCAATTATCCATAGAATTACATTCTCCTTCTCTTTATCGCCCCACCTGTTTTCTGATAGTCTTCTACTCTGCTTCTGCAGTGGACTTGTTAATTGTTATCTGATTTATCTCTTAACAAACTCTTGATTTTAATCCCAGATAGGATCATTAAGGCTATTTGTTAATAGCCAAGTAGACATTTTAAAGTCTGTATGGTTGATTCGGACTAGTTAACATTAACAATACGGCCCCTCAATTTATGTCTTGCATGGAGAGAATATTTCCATTGGGATGCTCAAAATGTCCGAATTGGCAGCACTTCGCCCTTCTTTTGAAATAGTAATGTTTGGTTACAAAAAAGACGGGATAAAGTTGGTTGGGGAGGTGGTGTTTAAATGCAGTGATATGTATAGGACAGTTAGGTAACGGACATGTTTATGTTAGTTGTCCCATTTTCTTAGAGCAAGTATTCGGAACAATGCCTCTCACCACCTCCAGTTAAATATCTATTTTAGTAACTGGTTGTTGACTTGGTGTAGTACCATTTATGACGTTTCAGAGATGCACCTTCATATAGTGTTTGGGATGATCTGAACTTTTAAGTCAAGAGAAGCTGTTGGACACTTGGACGAACATAGTTGGTTTTTACTCTGCCTGTTTTCGCTTTCGTTTATCTTACATTCTTACCAAAGTTTCATTTTACAATGTTTGTATAATGATTTTACATTGTAATATTATGTTGAAGTTGTGATCTCAAGGTAGGTAGAGCAGTATACGGGATGGGTCATAATGTTTGAGCTGGGTTCTGCTTCGCAGATGATAGGTGTTTTTTTTAATCTTGGCCGAAACCCTTGCATAACTCCATGAACCCTGACCAAAAATAACCTTAAAATTTTCGTCAGGGGTATTCACGTCGTTTTGTTTTATTTACTAGATACTAGATGCTGCTTGAAGTGTTCAATTATAGCACTTTATAATGTTTTCTGGTCAAGGGCTACCAGAGTGGCTTTTACAGATCACCTCTTACAAACTATGATCGACAGGCCTGCTGCTAATTTTCAATTTTTTTTGGAAAGTTTATCTGATAAATTAATCTGGGGGAACACCACCTAGCCCTGACCAGCGGACCACATTCAGAGTAGTGAGTGGTCAAACAATTGATGTTCCTGTAATTTTTTTTGAAAGTGGCTCAGCTCTACCGGGCAGGCCCAAAAGTTATGTATTTTCTGTATAGGAAAAGTCTTTATTCTGTGTTTGGTCCATCATTTTTTAACTACGAGGAAGATAAGGCAAGATGAATCATTATGTGGTGGACACTGGACAGGGAAGGATATCTTAAGAGAGGCCTTCCAATTGTGCCAATATATTCTTCGACATGTGTGGAAGACAAGAATAGTGACAAAAAAACCCAATGGAAATAAAATTTGTTTATCTTCTGCTGATTTGTTTGACCTTTGATCATGAGATGTTCCTTTTCCTCCATTAACTTGAGTTTATGTTGTATTCTGCAGTTTGTCATTGTATCTCTCACTGGATGGGCATTGGCTATCGGTGGAAGTTACAAGTTCTTTACTAGGGGAAAAGGCAAAACCGAGGAGGTATTTTTCTTTATATTTTTGAGATCCAAATCGCTGCTTGCTAGGATATGCATGGGAGTCATCTTGATTCATTCATTCGATGATATCTGACCTTTCATGTGAAACAATCTTAAGCATGCTAAGAAACAATAGTTTCTCAACTTATTCTGTAGTATTCCCTTTCTGTTTTAAGCTGTCACAAAATAATAGGGCACTATATTTTGTAAGATAAATTTGGAAGTTTCCGCATTAGTGGGAGAAGAAGGCAGAAGAGATAAAAGCAAGTGGCAAGGCGAGGGTAAAAGTGAGCTTGTATATTCCTTCCAAATCTTTCCAACATTAGAAAGATTTGGTTTACATAAAAGGAAGGAATATGAATCCCTCCAATTCCCTTCTCCCCAAATCACATGATCACATCCACACAAGAGAGAATCAATCCCTTTGTCGTTCTCTTTGCTCCCTTTTCCTCCATATTACCCTATACAAATGCACTGTTATTGATACTATTAACTCGATTCCTTGTTGACGATAAACTTATGGAAGGTTGAGTTGTACAATGTGGTGAAGGTAGTTCTTGTATTTTAATTGATTATCTGAAAATGACTCGGCGACTCCTAATAAAATGTAGCCTGTTGTTCAGATTCTGCAAGTGTGGATCTGATATACACCGTACTTGTTTATTGGATAAACATTTGCCTCATATAATTTACTGATTGTTGTTCTTACTCTGCTATACAACAGAAGTTGCTGGAGGCTTCACAGTAGAACATTCATTCATGACCCTCAAAACGCTTTTGCAATAAAGTCAGCACTCGAAACTGTTCAACCAGGTGGATATTTCTGGCATTCCAAATTGTTGCTGGTTAGATAGCTTTTGGAGTAAACAAATGTGAAGAAATGGATTTTTGACAATTTGAAATGTTGACACTAAATTTATTATTGTCTAAAATTAGTGTTGCTTCTCCTTGTACTTTGAAATTACCATAATTTGTTTGCATGATGTTGCCTGGTCTACTGGTTCTGTTGGAGGAAATTAGGGCAGCATACTGTATGTTCGTTTTAATATCTTTTGTTTTAATGGATTTTGAGCAAATAATGTCACCAACACATGTTTTTTTTTCCCCTTTTCCATTGCCAATCTTCCCCTTGAGTGATGTATGAGGTGAAGTAGTCTCCTGATGCTGCAGTTTGGATATGCCCTATGTGTTCGTTATGCTTTGCTTACCTTATGAATTTTGGAGTTAAGCCCAAAATAAGGACCTATCTTTTGGTTTTAATCACTAGTTAGGACCTGTGTTTTATTTACTCGCCATTTGGGACTTGAAATAAGAATTTTGGTCATTGTTAACCAAATGTGAGTTAAATATGGGCCTCGCACTACTCACAAGCATGAGAAAGATAACCTTGGCTTTCCAACACACAAGGAAACGATGGCGTTCCTGGTACCAAAAAAATCTCCTTTCTCGCTCGATTCATCTTCCTCTTTAACTCGAAATTCTCCATTGTCAAAGAATCAAGCGGCTTGCAAGAGCTACACCAACGTGGAAATTGCAGAAAATTCACACGATTTATGAAACGTATGTACTGTATGTACTTGTCTGCTGCAAAATTTTTCCTCAATAATTGAGTTGATT

mRNA sequence

TTTTGTTGATGGAAATAAAATACCCCCTCACTTTGAGGTTAGAACGTGAACCACCGTAAATCTCACCGCCCTCTCCATCTCCTCACTCGGTCTCTCCTCCCTTCGACACTTCTCTTTCGAAGTTCTCTCCTTCTTTCTCTCTCCTCAACAGCCATGGCGGCTCGTATTGTGGCGGCTGCTCGTCAAGCTGCATCCATCACCCGGATCTCCTCCGCTCAACCACCCCTTCCTCGGCTAGTTCAACGCCGTGGTTTTGCTGGCGCGGCCGAACATGGGCCACAAAAGGTAAACTGCTGGCAAGAACCAAAGAATCCTGGTAACTGGAAGGAAGAACACTTTGTCATTGTATCTCTCACTGGATGGGCATTGGCTATCGGTGGAAGTTACAAGTTCTTTACTAGGGGAAAAGGCAAAACCGAGGAGAAGTTGCTGGAGGCTTCACAGTAGAACATTCATTCATGACCCTCAAAACGCTTTTGCAATAAAGTCAGCACTCGAAACTGTTCAACCAGGTGGATATTTCTGGCATTCCAAATTGTTGCTGGTTAGATAGCTTTTGGAGTAAACAAATGTGAAGAAATGGATTTTTGACAATTTGAAATGTTGACACTAAATTTATTATTGTCTAAAATTAGTGTTGCTTCTCCTTGTACTTTGAAATTACCATAATTTGTTTGCATGATGTTGCCTGGTCTACTGGTTCTGTTGGAGGAAATTAGGGCAGCATACTGTATGTTCGTTTTAATATCTTTTGTTTTAATGGATTTTGAGCAAATAATGTCACCAACACATGTTTTTTTTTCCCCTTTTCCATTGCCAATCTTCCCCTTGAGTGATGTATGAGGTGAAGTAGTCTCCTGATGCTGCAGTTTGGATATGCCCTATGTGTTCGTTATGCTTTGCTTACCTTATGAATTTTGGAGTTAAGCCCAAAATAAGGACCTATCTTTTGGTTTTAATCACTAGTTAGGACCTGTGTTTTATTTACTCGCCATTTGGGACTTGAAATAAGAATTTTGGTCATTGTTAACCAAATGTGAGTTAAATATGGGCCTCGCACTACTCACAAGCATGAGAAAGATAACCTTGGCTTTCCAACACACAAGGAAACGATGGCGTTCCTGGTACCAAAAAAATCTCCTTTCTCGCTCGATTCATCTTCCTCTTTAACTCGAAATTCTCCATTGTCAAAGAATCAAGCGGCTTGCAAGAGCTACACCAACGTGGAAATTGCAGAAAATTCACACGATTTATGAAACGTATGTACTGTATGTACTTGTCTGCTGCAAAATTTTTCCTCAATAATTGAGTTGATT

Coding sequence (CDS)

ATGGCGGCTCGTATTGTGGCGGCTGCTCGTCAAGCTGCATCCATCACCCGGATCTCCTCCGCTCAACCACCCCTTCCTCGGCTAGTTCAACGCCGTGGTTTTGCTGGCGCGGCCGAACATGGGCCACAAAAGGTAAACTGCTGGCAAGAACCAAAGAATCCTGGTAACTGGAAGGAAGAACACTTTGTCATTGTATCTCTCACTGGATGGGCATTGGCTATCGGTGGAAGTTACAAGTTCTTTACTAGGGGAAAAGGCAAAACCGAGGAGAAGTTGCTGGAGGCTTCACAGTAG

Protein sequence

MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAEHGPQKVNCWQEPKNPGNWKEEHFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEASQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08861	Spo08861	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08861.1	Spo08861.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08861.1.utr5p.1	Spo08861.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08861.1.CDS.4	Spo08861.1.CDS.4	CDS
Spo08861.1.CDS.3	Spo08861.1.CDS.3	CDS
Spo08861.1.CDS.2	Spo08861.1.CDS.2	CDS
Spo08861.1.CDS.1	Spo08861.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08861.1.utr3p.1	Spo08861.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08861.1.exon.4	Spo08861.1.exon.4	exon
Spo08861.1.exon.3	Spo08861.1.exon.3	exon
Spo08861.1.exon.2	Spo08861.1.exon.2	exon
Spo08861.1.exon.1	Spo08861.1.exon.1	exon

Homology

[Close]

BLAST of Spo08861.1 vs. NCBI nr
Match: gi|902239369|gb|KNA25581.1| (hypothetical protein SOVF_005630 [Spinacia oleracea])

HSP 1 Score: 196.8 bits (499), Expect = 1.700e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

		  
Query: 1  MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAEHGPQKVNCWQEPKNPGNWKEE 60
          MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAEHGPQKVNCWQEPKNPGNWKEE
Sbjct: 1  MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAEHGPQKVNCWQEPKNPGNWKEE 60

Query: 61 HFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEASQ 98
          HFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEASQ
Sbjct: 61 HFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEASQ 97

[Close]

BLAST of Spo08861.1 vs. NCBI nr
Match: gi|731356483|ref|XP_010689697.1| (PREDICTED: uncharacterized protein LOC104903367 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 144.1 bits (362), Expect = 1.300e-31
Identity = 76/97 (78.35%), Postives = 83/97 (85.57%), Query Frame = 1

		  
Query: 1  MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAE-HGPQKVNCWQEPKNPGNWKE 60
          MAARIVAA RQAASIT+ISS  PP  +L+QRRG AGAA+ HGP KVNCWQEP NPGNWKE
Sbjct: 1  MAARIVAAVRQAASITKISSHHPP-TQLLQRRGLAGAADHHGPPKVNCWQEPTNPGNWKE 60

Query: 61 EHFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEAS 97
          EHFVIVSLTGW L I GSYKFFTRGKGK +E++ EAS
Sbjct: 61 EHFVIVSLTGWGLLITGSYKFFTRGKGK-KEQVAEAS 95

[Close]

BLAST of Spo08861.1 vs. NCBI nr
Match: gi|225447258|ref|XP_002278870.1| (PREDICTED: uncharacterized protein LOC100249870 [Vitis vinifera])

HSP 1 Score: 125.2 bits (313), Expect = 6.400e-26
Identity = 63/99 (63.64%), Postives = 77/99 (77.78%), Query Frame = 1

		  
Query: 1  MAARIVAAARQAASITRISSAQPP--LPRLVQRRGFAGAAEH-GPQKVNCWQEPKNPGNW 60
          MA+R+ AAARQAA +TR+SSA+P      L+QRRG AGAA+H GP ++N W++P +P  W
Sbjct: 1  MASRVAAAARQAAILTRLSSAKPSPQSANLIQRRGLAGAADHHGPPRINVWEDPMSPSKW 60

Query: 61 KEEHFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEAS 97
          KEEHFVIVSL+GW L   GSYKFFTRGK   EEKL+EAS
Sbjct: 61 KEEHFVIVSLSGWGLLFFGSYKFFTRGKKDKEEKLVEAS 99

[Close]

BLAST of Spo08861.1 vs. NCBI nr
Match: gi|118484195|gb|ABK93978.1| (unknown [Populus trichocarpa])

HSP 1 Score: 122.9 bits (307), Expect = 3.200e-25
Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 1

		  
Query: 7   AAARQAASITRISSAQPP--LPRLVQRRGFAGAAEH-GPQKVNCWQEPKNPGNWKEEHFV 66
           AAARQAA+++RISS + P  +  L+ RRG AGAA+H GP ++NCWQ+P +P  WKEEHFV
Sbjct: 8   AAARQAATLSRISSPKSPARVAALIHRRGLAGAADHHGPSRINCWQDPMSPSKWKEEHFV 67

Query: 67  IVSLTGWALAIGGSYKFFTRGKGKTEEKLLEAS 97
           IVSL+GW LA  G YKFFT GKGK EEK++EA+
Sbjct: 68  IVSLSGWGLAFYGGYKFFTGGKGKEEEKVVEAA 100

[Close]

BLAST of Spo08861.1 vs. NCBI nr
Match: gi|743904197|ref|XP_011045462.1| (PREDICTED: uncharacterized protein LOC105140363 [Populus euphratica])

HSP 1 Score: 122.5 bits (306), Expect = 4.100e-25
Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 1

		  
Query: 7   AAARQAASITRISSAQPP--LPRLVQRRGFAGAAEH-GPQKVNCWQEPKNPGNWKEEHFV 66
           AAARQAA+++RISS + P  +  L+ RRG AGAA+H GP ++NCWQ+P +P  WKEEHFV
Sbjct: 8   AAARQAATLSRISSPKSPAQVAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFV 67

Query: 67  IVSLTGWALAIGGSYKFFTRGKGKTEEKLLEAS 97
           IVSL+GW LA  G YKFFT GKGK EEK++EA+
Sbjct: 68  IVSLSGWGLAFYGGYKFFTGGKGKEEEKVVEAA 100

[Close]

BLAST of Spo08861.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1F6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_005630 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.200e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

		  
Query: 1  MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAEHGPQKVNCWQEPKNPGNWKEE 60
          MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAEHGPQKVNCWQEPKNPGNWKEE
Sbjct: 1  MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAEHGPQKVNCWQEPKNPGNWKEE 60

Query: 61 HFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEASQ 98
          HFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEASQ
Sbjct: 61 HFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEASQ 97

[Close]

BLAST of Spo08861.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPW5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g208780 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 9.200e-32
Identity = 76/97 (78.35%), Postives = 83/97 (85.57%), Query Frame = 1

		  
Query: 1  MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAE-HGPQKVNCWQEPKNPGNWKE 60
          MAARIVAA RQAASIT+ISS  PP  +L+QRRG AGAA+ HGP KVNCWQEP NPGNWKE
Sbjct: 1  MAARIVAAVRQAASITKISSHHPP-TQLLQRRGLAGAADHHGPPKVNCWQEPTNPGNWKE 60

Query: 61 EHFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEAS 97
          EHFVIVSLTGW L I GSYKFFTRGKGK +E++ EAS
Sbjct: 61 EHFVIVSLTGWGLLITGSYKFFTRGKGK-KEQVAEAS 95

[Close]

BLAST of Spo08861.1 vs. UniProtKB/TrEMBL
Match: D7TEK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02050 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.400e-26
Identity = 63/99 (63.64%), Postives = 77/99 (77.78%), Query Frame = 1

		  
Query: 1  MAARIVAAARQAASITRISSAQPP--LPRLVQRRGFAGAAEH-GPQKVNCWQEPKNPGNW 60
          MA+R+ AAARQAA +TR+SSA+P      L+QRRG AGAA+H GP ++N W++P +P  W
Sbjct: 1  MASRVAAAARQAAILTRLSSAKPSPQSANLIQRRGLAGAADHHGPPRINVWEDPMSPSKW 60

Query: 61 KEEHFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEAS 97
          KEEHFVIVSL+GW L   GSYKFFTRGK   EEKL+EAS
Sbjct: 61 KEEHFVIVSLSGWGLLFFGSYKFFTRGKKDKEEKLVEAS 99

[Close]

BLAST of Spo08861.1 vs. UniProtKB/TrEMBL
Match: A9PC75_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.200e-25
Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 1

		  
Query: 7   AAARQAASITRISSAQPP--LPRLVQRRGFAGAAEH-GPQKVNCWQEPKNPGNWKEEHFV 66
           AAARQAA+++RISS + P  +  L+ RRG AGAA+H GP ++NCWQ+P +P  WKEEHFV
Sbjct: 8   AAARQAATLSRISSPKSPARVAALIHRRGLAGAADHHGPSRINCWQDPMSPSKWKEEHFV 67

Query: 67  IVSLTGWALAIGGSYKFFTRGKGKTEEKLLEAS 97
           IVSL+GW LA  G YKFFT GKGK EEK++EA+
Sbjct: 68  IVSLSGWGLAFYGGYKFFTGGKGKEEEKVVEAA 100

[Close]

BLAST of Spo08861.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KAD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G124050 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.200e-24
Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 1

		  
Query: 1  MAARIVAAARQAASITRISSAQPPLPRLVQRRGFAGAAE-HGPQKVNCWQEPKNPGNWKE 60
          MA    AA R A ++ R+SS Q     L+ +RG AGAA+ HGP KVNCWQ+P +P  WKE
Sbjct: 1  MATLAAAAVRHARALARVSSPQ-STANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKE 60

Query: 61 EHFVIVSLTGWALAIGGSYKFFTRGKGKTEEKLLEASQ 98
          EHFV+VSL+GWAL I G YKFFTRGKGK +EKL EASQ
Sbjct: 61 EHFVLVSLSGWALLISGGYKFFTRGKGK-DEKLAEASQ 96

[Close]

BLAST of Spo08861.1 vs. TAIR (Arabidopsis)
Match: AT2G20820.2 (unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 2.800e-8
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1

		  
Query: 9  ARQAASITRISSAQ--PPLPRLVQRRGFAGAAEH-GPQKVNCWQEPKNPGNWKEEHFV 64
          AR+A S+ +I SA+       + QRR  AGAA+H G  KV+ W++P NPGNWKEEH++
Sbjct: 5  ARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHWI 62

The following BLAST results are available for this feature:

BLAST of Spo08861.1 vs. NCBI nr
BLAST of Spo08861.1 vs. UniProtKB/TrEMBL
BLAST of Spo08861.1 vs. ExPASy Swiss-Prot
BLAST of Spo08861.1 vs. TAIR (Arabidopsis)

BLAST of Spo08861.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902239369\|gb\|KNA25581.1\|	1.7e-47	100.	hypothetical protein SOVF_0056...	[more]
gi\|731356483\|ref\|XP_010689697.1\|	1.3e-31	78.3	PREDICTED: uncharacterized pro...	[more]
gi\|225447258\|ref\|XP_002278870.1\|	6.4e-26	63.6	PREDICTED: uncharacterized pro...	[more]
gi\|118484195\|gb\|ABK93978.1\|	3.2e-25	63.4	unknown [Populus trichocarpa]	[more]
gi\|743904197\|ref\|XP_011045462.1\|	4.1e-25	63.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo08861.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9S1F6_SPIOL	1.2e-47	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BPW5_BETVU	9.2e-32	78.3	Uncharacterized protein OS=Bet...	[more]
D7TEK2_VITVI	4.4e-26	63.6	Putative uncharacterized prote...	[more]
A9PC75_POPTR	2.2e-25	63.4	Putative uncharacterized prote...	[more]
A0A0A0KAD9_CUCSA	3.2e-24	62.2	Uncharacterized protein OS=Cuc...	[more]

BLAST of Spo08861.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo08861.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT2G20820.2	2.8e-8	50.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35292	FAMILY NOT NAMED	coord: 1..95 score: 4.7
None	No IPR available	PANTHER	PTHR35292:SF1	SUBFAMILY NOT NAMED	coord: 1..95 score: 4.7