Spo12226.1 (mRNA) | SpinachBase

Overview


Name	Spo12226.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Xyloglucan endotransglucosylase/hydrolase (2.4.1.207)
Location	SpoScf_01968 : 64068 .. 64454 (-)
Sequence length	387

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAAATGCAGATTCTTGGTTGATAATACACCAATTAGGGTATTCAAGAACCATGAAGCTAGAGGGGTGGGGTTCCCAAAGACCCAACCCATGAGGATATACTCGAGCTTGTGGAATGCGGACCAATGGGCTACTCAAGGAGGTCGAGTTAAGACGGATTGGGCTAAGGCTCCGTTCACGGCTTACTACCGGAACTTTAACGTAAACCCTAACCACGCGGCTGCAACGGCGGCGTTCACCGATTCAAAGTGGCAAAACCAAGAGTTGAATGCATGGAGTAGAAGGAGACTAAGATGGGTTCAAAAGTATTTCATGATCTATAATTATTGTGCTGATGCACAAAGGTTTCCTCGTGGTGTTCCTGTTGAATGCAAGATGATGTGA

mRNA sequence

ATGAATAAATGCAGATTCTTGGTTGATAATACACCAATTAGGGTATTCAAGAACCATGAAGCTAGAGGGGTGGGGTTCCCAAAGACCCAACCCATGAGGATATACTCGAGCTTGTGGAATGCGGACCAATGGGCTACTCAAGGAGGTCGAGTTAAGACGGATTGGGCTAAGGCTCCGTTCACGGCTTACTACCGGAACTTTAACGTAAACCCTAACCACGCGGCTGCAACGGCGGCGTTCACCGATTCAAAGTGGCAAAACCAAGAGTTGAATGCATGGAGTAGAAGGAGACTAAGATGGGTTCAAAAGTATTTCATGATCTATAATTATTGTGCTGATGCACAAAGGTTTCCTCGTGGTGTTCCTGTTGAATGCAAGATGATGTGA

Coding sequence (CDS)

ATGAATAAATGCAGATTCTTGGTTGATAATACACCAATTAGGGTATTCAAGAACCATGAAGCTAGAGGGGTGGGGTTCCCAAAGACCCAACCCATGAGGATATACTCGAGCTTGTGGAATGCGGACCAATGGGCTACTCAAGGAGGTCGAGTTAAGACGGATTGGGCTAAGGCTCCGTTCACGGCTTACTACCGGAACTTTAACGTAAACCCTAACCACGCGGCTGCAACGGCGGCGTTCACCGATTCAAAGTGGCAAAACCAAGAGTTGAATGCATGGAGTAGAAGGAGACTAAGATGGGTTCAAAAGTATTTCATGATCTATAATTATTGTGCTGATGCACAAAGGTTTCCTCGTGGTGTTCCTGTTGAATGCAAGATGATGTGA

Protein sequence

MNKCRFLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYRNFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVECKMM

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12226	Spo12226	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12226.1	Spo12226.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12226.1.CDS.1	Spo12226.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12226.1.exon.1	Spo12226.1.exon.1	exon

Homology

[Close]

BLAST of Spo12226.1 vs. NCBI nr
Match: gi|902166498|gb|KNA07231.1| (hypothetical protein SOVF_173740 [Spinacia oleracea])

HSP 1 Score: 270.4 bits (690), Expect = 1.600e-69
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR
Sbjct: 162 FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 221

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC
Sbjct: 222 NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 281

Query: 126 KMM 129
           KMM
Sbjct: 282 KMM 284

[Close]

BLAST of Spo12226.1 vs. NCBI nr
Match: gi|731325156|ref|XP_010673363.1| (PREDICTED: brassinosteroid-regulated protein BRU1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 245.0 bits (624), Expect = 7.300e-62
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDN PIRVFKNHEA+GV FPK Q MRIYSSLWNADQWATQGGRVKTDW+KAPFTAYYR
Sbjct: 161 FLVDNMPIRVFKNHEAKGVPFPKNQAMRIYSSLWNADQWATQGGRVKTDWSKAPFTAYYR 220

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NFN NPNHAAATAAFTD KWQNQELNAW+RRRLRWVQKYFMIYNYC D QRFP GVPVEC
Sbjct: 221 NFNANPNHAAATAAFTDGKWQNQELNAWNRRRLRWVQKYFMIYNYCTDFQRFPGGVPVEC 280

Query: 126 KM 128
           KM
Sbjct: 281 KM 282

[Close]

BLAST of Spo12226.1 vs. NCBI nr
Match: gi|802639567|ref|XP_012078442.1| (PREDICTED: xyloglucan endotransglucosylase/hydrolase 2 [Jatropha curcas])

HSP 1 Score: 194.9 bits (494), Expect = 8.600e-47
Identity = 89/121 (73.55%), Postives = 104/121 (85.95%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDNTPIRVF+N E+ GV FPK QPMRIYSSLWNAD WAT+GG VKTDW KAPFTAYYR
Sbjct: 158 FLVDNTPIRVFRNAESLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYR 217

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NFNVN   A ++++F+DS +Q  EL+A SRRRLRWVQKYFMIYNYC+D +RFP+G+P EC
Sbjct: 218 NFNVN---AISSSSFSDSAFQTNELDAPSRRRLRWVQKYFMIYNYCSDLKRFPQGLPTEC 275

Query: 126 K 127
           +
Sbjct: 278 R 275

[Close]

BLAST of Spo12226.1 vs. NCBI nr
Match: gi|350996666|gb|AEQ37175.1| (xyloglucan endotransglucosylase/hydrolase [Diospyros kaki])

HSP 1 Score: 194.5 bits (493), Expect = 1.100e-46
Identity = 88/121 (72.73%), Postives = 97/121 (80.17%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FL+DNTPIRVFKN E+ GV FPK QPMRIYSSLWNAD WAT+GG VKTDW KAPFTAYYR
Sbjct: 161 FLIDNTPIRVFKNAESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYR 220

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NFN      A T +F D  WQ+QEL+A SRRRLRWVQK FMIYNYC D +RFP G+P EC
Sbjct: 221 NFNAKTCSGACTESFGDGAWQSQELDAHSRRRLRWVQKNFMIYNYCTDLKRFPEGLPKEC 280

Query: 126 K 127
           +
Sbjct: 281 Q 281

[Close]

BLAST of Spo12226.1 vs. NCBI nr
Match: gi|187372968|gb|ACD03218.1| (xyloglucan endotransglucosylase/hydrolase 8 [Actinidia deliciosa])

HSP 1 Score: 193.4 bits (490), Expect = 2.500e-46
Identity = 89/126 (70.63%), Postives = 103/126 (81.75%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDNTPIRVFKN E  GV FPKTQPMRIYSSLWNAD WAT+GG VKTDW KAPFTAYYR
Sbjct: 155 FLVDNTPIRVFKNAETIGVPFPKTQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYR 214

Query: 66  NFNV---NPNHAAATAA--FTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRG 125
           NFNV   +P    +++A   ++  WQ QEL+A+SRRRLRWVQK+FMIYNYC D +RFP+G
Sbjct: 215 NFNVQTCSPRSCTSSSASSISNGAWQGQELDAYSRRRLRWVQKHFMIYNYCTDLKRFPQG 274

Query: 126 VPVECK 127
           +P EC+
Sbjct: 275 IPAECR 280

[Close]

BLAST of Spo12226.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKY1_SPIOL (Xyloglucan endotransglucosylase/hydrolase OS=Spinacia oleracea GN=SOVF_173740 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.100e-69
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR
Sbjct: 162 FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 221

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC
Sbjct: 222 NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 281

Query: 126 KMM 129
           KMM
Sbjct: 282 KMM 284

[Close]

BLAST of Spo12226.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRX9_BETVU (Xyloglucan endotransglucosylase/hydrolase OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065250 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.100e-62
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDN PIRVFKNHEA+GV FPK Q MRIYSSLWNADQWATQGGRVKTDW+KAPFTAYYR
Sbjct: 161 FLVDNMPIRVFKNHEAKGVPFPKNQAMRIYSSLWNADQWATQGGRVKTDWSKAPFTAYYR 220

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NFN NPNHAAATAAFTD KWQNQELNAW+RRRLRWVQKYFMIYNYC D QRFP GVPVEC
Sbjct: 221 NFNANPNHAAATAAFTDGKWQNQELNAWNRRRLRWVQKYFMIYNYCTDFQRFPGGVPVEC 280

Query: 126 KM 128
           KM
Sbjct: 281 KM 282

[Close]

BLAST of Spo12226.1 vs. UniProtKB/TrEMBL
Match: A0A067KJZ2_JATCU (Xyloglucan endotransglucosylase/hydrolase OS=Jatropha curcas GN=JCGZ_13130 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.000e-47
Identity = 89/121 (73.55%), Postives = 104/121 (85.95%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDNTPIRVF+N E+ GV FPK QPMRIYSSLWNAD WAT+GG VKTDW KAPFTAYYR
Sbjct: 158 FLVDNTPIRVFRNAESLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYR 217

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NFNVN   A ++++F+DS +Q  EL+A SRRRLRWVQKYFMIYNYC+D +RFP+G+P EC
Sbjct: 218 NFNVN---AISSSSFSDSAFQTNELDAPSRRRLRWVQKYFMIYNYCSDLKRFPQGLPTEC 275

Query: 126 K 127
           +
Sbjct: 278 R 275

[Close]

BLAST of Spo12226.1 vs. UniProtKB/TrEMBL
Match: G5DAC6_DIOKA (Xyloglucan endotransglucosylase/hydrolase OS=Diospyros kaki GN=XTH1 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 7.800e-47
Identity = 88/121 (72.73%), Postives = 97/121 (80.17%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FL+DNTPIRVFKN E+ GV FPK QPMRIYSSLWNAD WAT+GG VKTDW KAPFTAYYR
Sbjct: 161 FLIDNTPIRVFKNAESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYR 220

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NFN      A T +F D  WQ+QEL+A SRRRLRWVQK FMIYNYC D +RFP G+P EC
Sbjct: 221 NFNAKTCSGACTESFGDGAWQSQELDAHSRRRLRWVQKNFMIYNYCTDLKRFPEGLPKEC 280

Query: 126 K 127
           +
Sbjct: 281 Q 281

[Close]

BLAST of Spo12226.1 vs. UniProtKB/TrEMBL
Match: C0IRG7_ACTDE (Xyloglucan endotransglucosylase/hydrolase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.700e-46
Identity = 89/126 (70.63%), Postives = 103/126 (81.75%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDNTPIRVFKN E  GV FPKTQPMRIYSSLWNAD WAT+GG VKTDW KAPFTAYYR
Sbjct: 155 FLVDNTPIRVFKNAETIGVPFPKTQPMRIYSSLWNADDWATRGGLVKTDWTKAPFTAYYR 214

Query: 66  NFNV---NPNHAAATAA--FTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRG 125
           NFNV   +P    +++A   ++  WQ QEL+A+SRRRLRWVQK+FMIYNYC D +RFP+G
Sbjct: 215 NFNVQTCSPRSCTSSSASSISNGAWQGQELDAYSRRRLRWVQKHFMIYNYCTDLKRFPQG 274

Query: 126 VPVECK 127
           +P EC+
Sbjct: 275 IPAECR 280

[Close]

BLAST of Spo12226.1 vs. ExPASy Swiss-Prot
Match: XTH2_SOYBN (Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.300e-46
Identity = 83/121 (68.60%), Postives = 100/121 (82.64%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDNTPIRVFKN E  GV FPK QPMRIYSSLWNAD WAT+GG VKTDW+KAPFTAYYR
Sbjct: 162 FLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYR 221

Query: 66  NFNVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 125
           NF      + ++ + + ++++  EL+A+SRRRLRWVQKYFMIYNYC+D +RFP+G+P EC
Sbjct: 222 NFKAIEFSSKSSISNSGAEYEANELDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAEC 281

Query: 126 K 127
           K
Sbjct: 282 K 282

[Close]

BLAST of Spo12226.1 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 6.800e-44
Identity = 87/128 (67.97%), Postives = 97/128 (75.78%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDN PIRVF N E  GV FPK+QPMRIYSSLWNAD WAT+GG VKTDW+KAPFTAYYR
Sbjct: 158 FLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYR 217

Query: 66  NFNVNPNHAAA------TAAFTDSKWQ-NQELNAWSRRRLRWVQKYFMIYNYCADAQRFP 125
            FN     A++       ++F D K Q   ELNA+ RRRLRWVQKYFMIYNYC+D +RFP
Sbjct: 218 GFNAAACTASSGCDPKFKSSFGDGKLQVATELNAYGRRRLRWVQKYFMIYNYCSDLKRFP 277

Query: 126 RGVPVECK 127
           RG P ECK
Sbjct: 278 RGFPPECK 285

[Close]

BLAST of Spo12226.1 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 1.300e-42
Identity = 80/131 (61.07%), Postives = 97/131 (74.05%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           F+VDN PIRVF N E  GV FPK QPM+IYSSLWNAD WAT+GG VKTDW+KAPFTAYYR
Sbjct: 157 FMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYR 216

Query: 66  NFNVNPNHAAATAAFTDSKWQN----------QELNAWSRRRLRWVQKYFMIYNYCADAQ 125
            FN      ++ ++F D K+++           ELNA+ RRRLRWVQKYFMIY+YC+D +
Sbjct: 217 GFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWVQKYFMIYDYCSDLK 276

Query: 126 RFPRGVPVECK 127
           RFP+G P EC+
Sbjct: 277 RFPQGFPPECR 287

[Close]

BLAST of Spo12226.1 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.100e-37
Identity = 73/131 (55.73%), Postives = 91/131 (69.47%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           F VD TPIR FKN E+ G  FPK +PMR+YSSLWNAD WAT+GG VKTDW+KAPFTA YR
Sbjct: 153 FTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYR 212

Query: 66  NFNVN-----------PNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADA 125
            F              PN  A+    T   W +QEL++ +++R+RWVQ+ +MIYNYC DA
Sbjct: 213 GFQQEACVWSNGKSSCPN--ASKQGTTTGSWLSQELDSTAQQRMRWVQRNYMIYNYCTDA 272

[Close]

BLAST of Spo12226.1 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 2.400e-36
Identity = 68/118 (57.63%), Postives = 87/118 (73.73%), Query Frame = 1


		  
Query: 8   VDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYRNF 67
           VD+TPIR FKN+E+ GV FPK +PMR+Y+SLWNAD WAT+GG VKTDW+KAPF A YRN 
Sbjct: 156 VDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNI 215

Query: 68  NVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 126
            ++           +S W  QE+++ S+ RL+WVQK +MIYNYC D +RFP+G P EC
Sbjct: 216 KIDSK--------PNSNWYTQEMDSTSQARLKWVQKNYMIYNYCTDHRRFPQGAPKEC 265

[Close]

BLAST of Spo12226.1 vs. TAIR (Arabidopsis)
Match: AT4G14130.1 (xyloglucan endotransglucosylase/hydrolase 15)

HSP 1 Score: 177.9 bits (450), Expect = 3.800e-45
Identity = 87/128 (67.97%), Postives = 97/128 (75.78%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           FLVDN PIRVF N E  GV FPK+QPMRIYSSLWNAD WAT+GG VKTDW+KAPFTAYYR
Sbjct: 158 FLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYR 217

Query: 66  NFNVNPNHAAA------TAAFTDSKWQ-NQELNAWSRRRLRWVQKYFMIYNYCADAQRFP 125
            FN     A++       ++F D K Q   ELNA+ RRRLRWVQKYFMIYNYC+D +RFP
Sbjct: 218 GFNAAACTASSGCDPKFKSSFGDGKLQVATELNAYGRRRLRWVQKYFMIYNYCSDLKRFP 277

Query: 126 RGVPVECK 127
           RG P ECK
Sbjct: 278 RGFPPECK 285

[Close]

BLAST of Spo12226.1 vs. TAIR (Arabidopsis)
Match: AT3G23730.1 (xyloglucan endotransglucosylase/hydrolase 16)

HSP 1 Score: 173.7 bits (439), Expect = 7.300e-44
Identity = 80/131 (61.07%), Postives = 97/131 (74.05%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           F+VDN PIRVF N E  GV FPK QPM+IYSSLWNAD WAT+GG VKTDW+KAPFTAYYR
Sbjct: 157 FMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYR 216

Query: 66  NFNVNPNHAAATAAFTDSKWQN----------QELNAWSRRRLRWVQKYFMIYNYCADAQ 125
            FN      ++ ++F D K+++           ELNA+ RRRLRWVQKYFMIY+YC+D +
Sbjct: 217 GFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWVQKYFMIYDYCSDLK 276

Query: 126 RFPRGVPVECK 127
           RFP+G P EC+
Sbjct: 277 RFPQGFPPECR 287

[Close]

BLAST of Spo12226.1 vs. TAIR (Arabidopsis)
Match: AT5G57560.1 (Xyloglucan endotransglucosylase/hydrolase family protein)

HSP 1 Score: 154.5 bits (389), Expect = 4.600e-38
Identity = 73/131 (55.73%), Postives = 91/131 (69.47%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           F VD TPIR FKN E+ G  FPK +PMR+YSSLWNAD WAT+GG VKTDW+KAPFTA YR
Sbjct: 153 FTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYR 212

Query: 66  NFNVN-----------PNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADA 125
            F              PN  A+    T   W +QEL++ +++R+RWVQ+ +MIYNYC DA
Sbjct: 213 GFQQEACVWSNGKSSCPN--ASKQGTTTGSWLSQELDSTAQQRMRWVQRNYMIYNYCTDA 272

[Close]

BLAST of Spo12226.1 vs. TAIR (Arabidopsis)
Match: AT4G30270.1 (xyloglucan endotransglucosylase/hydrolase 24)

HSP 1 Score: 152.9 bits (385), Expect = 1.300e-37
Identity = 68/118 (57.63%), Postives = 87/118 (73.73%), Query Frame = 1


		  
Query: 8   VDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYRNF 67
           VD+TPIR FKN+E+ GV FPK +PMR+Y+SLWNAD WAT+GG VKTDW+KAPF A YRN 
Sbjct: 156 VDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNI 215

Query: 68  NVNPNHAAATAAFTDSKWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRFPRGVPVEC 126
            ++           +S W  QE+++ S+ RL+WVQK +MIYNYC D +RFP+G P EC
Sbjct: 216 KIDSK--------PNSNWYTQEMDSTSQARLKWVQKNYMIYNYCTDHRRFPQGAPKEC 265

[Close]

BLAST of Spo12226.1 vs. TAIR (Arabidopsis)
Match: AT4G25810.1 (xyloglucan endotransglycosylase 6)

HSP 1 Score: 152.5 bits (384), Expect = 1.700e-37
Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 1


		  
Query: 6   FLVDNTPIRVFKNHEARGVGFPKTQPMRIYSSLWNADQWATQGGRVKTDWAKAPFTAYYR 65
           F VD TPIR FKN E++G  FPK QPMR+YSSLWNA++WAT+GG VKTDW+KAPFTA YR
Sbjct: 156 FSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYR 215

Query: 66  NFN------VNPNHAAATAAFTDS--KWQNQELNAWSRRRLRWVQKYFMIYNYCADAQRF 125
            FN      +N   +    +   S   W +QEL++  + ++RWVQ  +MIYNYC DA+RF
Sbjct: 216 GFNEEACVVINGQSSCPNVSGQGSTGSWLSQELDSTGQEQMRWVQNNYMIYNYCTDAKRF 275

The following BLAST results are available for this feature:

BLAST of Spo12226.1 vs. NCBI nr
BLAST of Spo12226.1 vs. UniProtKB/TrEMBL
BLAST of Spo12226.1 vs. ExPASy Swiss-Prot
BLAST of Spo12226.1 vs. TAIR (Arabidopsis)

BLAST of Spo12226.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902166498\|gb\|KNA07231.1\|	1.6e-69	100.	hypothetical protein SOVF_1737...	[more]
gi\|731325156\|ref\|XP_010673363.1\|	7.3e-62	90.1	PREDICTED: brassinosteroid-reg...	[more]
gi\|802639567\|ref\|XP_012078442.1\|	8.6e-47	73.5	PREDICTED: xyloglucan endotran...	[more]
gi\|350996666\|gb\|AEQ37175.1\|	1.1e-46	72.7	xyloglucan endotransglucosylas...	[more]
gi\|187372968\|gb\|ACD03218.1\|	2.5e-46	70.6	xyloglucan endotransglucosylas...	[more]

BLAST of Spo12226.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QKY1_SPIOL	1.1e-69	100.	Xyloglucan endotransglucosylas...	[more]
A0A0J8CRX9_BETVU	5.1e-62	90.1	Xyloglucan endotransglucosylas...	[more]
A0A067KJZ2_JATCU	6.0e-47	73.5	Xyloglucan endotransglucosylas...	[more]
G5DAC6_DIOKA	7.8e-47	72.7	Xyloglucan endotransglucosylas...	[more]
C0IRG7_ACTDE	1.7e-46	70.6	Xyloglucan endotransglucosylas...	[more]

BLAST of Spo12226.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
XTH2_SOYBN	4.3e-46	68.6	Xyloglucan endotransglucosylas...	[more]
XTH15_ARATH	6.8e-44	67.9	Xyloglucan endotransglucosylas...	[more]
XTH16_ARATH	1.3e-42	61.0	Probable xyloglucan endotransg...	[more]
XTH22_ARATH	8.1e-37	55.7	Xyloglucan endotransglucosylas...	[more]
XTH24_ARATH	2.4e-36	57.6	Xyloglucan endotransglucosylas...	[more]

BLAST of Spo12226.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G14130.1	3.8e-45	67.9	xyloglucan endotransglucosylas...	[more]
AT3G23730.1	7.3e-44	61.0	xyloglucan endotransglucosylas...	[more]
AT5G57560.1	4.6e-38	55.7	Xyloglucan endotransglucosylas...	[more]
AT4G30270.1	1.3e-37	57.6	xyloglucan endotransglucosylas...	[more]
AT4G25810.1	1.7e-37	55.4	xyloglucan endotransglycosylas...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000757	Glycoside hydrolase family 16	PFAM	PF00722	Glyco_hydro_16	coord: 2..57 score: 1.4
IPR000757	Glycoside hydrolase family 16	PROFILE	PS51762	GH16_2	coord: 1..64 score: 10
IPR010713	Xyloglucan endo-transglycosylase, C-terminal	PFAM	PF06955	XET_C	coord: 83..125 score: 6.6
IPR013320	Concanavalin A-like lectin/glucanase domain	GENE3D	2.60.120.200		coord: 3..127 score: 6.7
IPR013320	Concanavalin A-like lectin/glucanase domain	unknown	SSF49899	Concanavalin A-like lectins/glucanases	coord: 4..126 score: 4.46
None	No IPR available	PANTHER	PTHR31062	FAMILY NOT NAMED	coord: 6..127 score: 3.1
None	No IPR available	PANTHER	PTHR31062:SF30	SUBFAMILY NOT NAMED	coord: 6..127 score: 3.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006073	cellular glucan metabolic process
biological_process	GO:0071555	cell wall organization
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005618	cell wall
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity