Spo11340.1 (mRNA) | SpinachBase

Overview


Name	Spo11340.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Tetratricopeptide repeat-containing protein
Location	SpoScf_02133 : 44921 .. 55364 (-)
Sequence length	2321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGCGACTGACACGAGCGAACGACACCACACGGCAAAGCTCCATCTTAATTCACTAGACAGTAGACATTCACTTGCGCGGCATTCGGGTGTATATACAGGCTGCTACATCTGTCATAATTATTCTCTCTCTTTCATCCATTCCACTTTTCTTCCTCAGACCATCTCCGATTAACAACCTTATTTCGGATCTCCTGTTCGTAAGATCATATCAACATCAGATCTTGTTCAATAATTCGTCATCTGAGGTACATTTTCAATTTCACTTTTGAAACTTTCTTCAATTTTATTGGCAATAAGTTTTACTGATCAAAATTATACGCAATAATGAATTCCAATTACGGCAAGAATGGTACGAACAATTTCGATTTTGATTTAGGAATCCGATCAAATTTTCCTAAATCCCTAAATGATCAGAAAAACAAATCGAATTCTTACTCATACATGTCATCTGCAACCTCTTCGTTGTCGCAATCGAAACCTGCCACCACAACGCCGTCATGGCAGCCTGGGAAGCCGTCGTGGACGCACCAGCCCGCGCCGGGTAACAACGGGGTGACTCGATCCGAGTTGGGCGGTCCTGCTTCCATGGTGGGGGATATCTTTGGGAAGAGTTGGAACTCTCCTAAGCCTGCCACTTCTGGGCAGAGTGTTAACATTGGGGTTGTTAATAAGAACCCTAACTTGTTTGGGGATTTGGTGGGTTCTGCGTTGGGGCAGAACAAAAGTAGTAGTAATGTTCCCTTGAAAAGTGCTGCTCCTGTTAAGAGCTCGTTTTCGATGGGGGGTGTGGCGGATTCGCTGCCGAAAACGAATAATAGTAATGTGGGGAAGAATGGTGCTGGTGCTGGATTGGGTTCTTCCCAGAGCTTTGCAAGCTTTGGAGGTGCAACAAATGGTAGTAGTCTTTATGGGAATACTGGTGTGAACAAGAGTTCAAGTATGGGTGGTGGTTCAATGCGGAGTGTAGCTGGTGGAAGTGGTGGTGGTGGTATTGGAACTGGGATGAGCTCCAATAAAGACCCATTTGGTTCGTTGGTTGATTTTTCAGCGAAACCTATGGGTGGTGGTAGTCTTAATTCATCTTCCAAAGCTACTGCTTCTACTTCTTCGGAGGACTTGGGGTTTGGGGATTTCCAAAATGCATCAAAATCAAATACATCCACATTTCCTTCTGGAAACGGCAACTCCTGGGGATCTAGTTCGGGTGCAGTTCCACAAATGGATAGTTTTGCAGCTTTTGCCCCTCAGAAGAATCCTGCACCTGTACAACCTAGTTGTGGTGATTCATTTGACATGTTTTTCTCACCATCAGCAGCTTCTGGTGGTAGCGGCGATGCTCCAGTATCAGATCATGCTGCTGGAGGAAACCAGTTTTCAGGCGGGGACAATTGGGGTTTTGAATCAGAATATGGAGGACATGATGGGGGTAGTACTACTGAGATTGAAGGGCTTCCACCACCTCCAGCTGGTGTTTCAGCTTCTACTGCAAAGTCTAAAGGTCTGGATAACTATAAACAAGGGCAGTTTGCTGATGCTATAAAGTGGCTTTCTTGGGCTGAAGTTCTTCTTGAGAAAGCTGGCGAGGCTGCTGGCACAATGGAGGTCTTGTCTTGTAGGGCCTCATGCTACAAGGAAGTTGGGGAGTACAAGAAGGCTGTTGCTGATTGTACAAAGGTATACTTTTATCCTTTTAACTTTTTCTAGTTCATATATCATGCAGTTATTTTTCTTGATTTAACTCTCTTATACACCTGAAATACATTGACTTTTAGTTATTTTAGTTATTCACCGTGTTGTGAAATTTTTGTAAGGAATGTCCTTTTAATGAAAAAATATTTGTGGTACATAAAATCATGTTTAGGGAAACAATGGTACAATACCTCTTGACATGTTTGAGTGTTGGACTTGGGGATAACTAGTTCAAATTTCCAATTTGAGATGTTAAATAAAGCAAGGTTTTAGGCAACAGTTGATCTACCTTATTTACCGCAAGCATGATTTTGTATATGGAAATGGATGCTGACACACTGAATCTTTTGAACGGGGTCAGCAAGTGGCCATCATGCGGAAAAGCTATACATGCAAAAGCCTGCAGCCTCTTATTTGTTGTGTCTGTTTGTGGAGCGAATGGTGTAAAGGATATTGTTAAGAATGCAAACTATCTAGAGCGTGGCATATTATCCAAAAATTTGTAAAATTAATTTATGGGGTATAGTGTTGAACTTCAAAATCATGAAAAAGGATTTTATCATGAAGTGAAACTGTAAGTGTTAGAGAGCAAGGCCGTTATAACTTAAGCTAAACAGTTAAAATAATTGTAGTTGCACTGTTGCAGTCACGGTCATTCTAATGTTTTGGGGAGTCATAGAAGTGACATCACACCAGTGTTTGCAGTCATCGCAATGTGAAGTCATCGCAAAGTGAAGTTAAAACTTGAGGAAGTTCTAGTTCAATATTACAATTCTTGTTAGGATATACTTGAAAGTTTTACAATATAATTGTCAAGACCTTATACTATTATCTGGTGTAGAAATTATTGGTTCTATATGTTTGTAGTGATTATAATATGGCCATGGGTTTGCAATGCATGGGGTAGAAAAGGGAAGGTTAGGATTCAGTAAGACGGAGCTTGAGCAACAAGAAGATGGGAGTTAGCTAATCTATAAAAAGAGGAGTTTAGCAAAAGAGAAAGCATGATGAATGTTGATTAGAGTTTTATTTTGTTAGCTTTTTTAGTGAGAGTGTCCAGCTAAAACTGAAGCTGGGATTTTATGCTCTATTTGAAGATTAAATTGTATCAAATACAATCTAATATCTATGTTTCACCAAATCTCTTCTTCCTTATTTCTTTTATCTGTTTATCCAATCTGTTACAGAGTCCATTATGTGAATATTGTGAAAAATATATACACTGGCTTTAATAACAGAGTCTAGTCAATATTGGCTGATACAGTAATTTAATGGCAAGAATGGTTGTGTCTGTCCCTGTGATTTGATAAGTTGAAATTTCTGCATAAAATGATTTGTACTTAATGGAATGACCTTCATTTGATTCCCTGATTACAGTATTCACTTACAAATGCAAACCTATTCTGTTGCTTAAGAGGAGAAACAGGACAACTCAACTCAGCAATGTTAGGCTTACCACAATCTTTAGCTTCACCATTCTTCGAAGCACCTTCATGAAAATATTCTCAATCCAATTAGCCCTTTAGAAATACCTTACACAACATAGATCAGCAAGAATTGTTGAAAATTCACATTGAAGGATGGGGGGGACTTTAGGAGTTTAGGCATAAAAGAGACATTGAATATTCACGTGTTCCTAGTTGAGAACTGCAAAATAACTCCCAACATAAAGATACTATCTTAAAGCACCTACAGGACTAGCCGCATCACAGAACAAAGAAACAGACTCTTAGAGCTAATAGCTTTCTCCCCAGTAGGAAATACGTGGACTGAACATCATCTTTAACCAGTAACATTCCTGAAAATCAGGGCACTACAGTTCTGAATGTTTTTGTAGTGGACAACTTCGCCAGTGAAGGATGTACGATTCCTATTGTTCTTGTGTTAGAAGTTGAACTTTTGTACTGAGGAAAATCTAATGCTGATAGGGGTTTTTGGAAAGCTCTAGAACTGAATAAATTTCATTGACGTTCATCGATGGAAGCTTCATCTTAGTTTGGTCAAATTGTCAAAGGTGGATTAAGGGTGGTCTCTCCACATTGTGGAATTCAGTTTTGGTTTTGGGCTGATCTAGGAGGTGATTTTGGGCCTCACATGTTTCGAGGCAAGTAGATTCTCTAGTTTTCCCATGTCTCTGTTCCTTTTAATATTTGATGGATATGCAGTGTACCTAAGAGATTGTATAAGGTTATCAAAGGTTTTTTGGTGTATATTGGGAAAGCTTTCGCGGGATCACCTATTGAGATAGGAGTTTATTTGCAAACCTGATGAAGACCGAGGACTGGATTTTGGTAGTTTGACACATAGGGTTATATAAATCTAATTAGTGTTGGGATCTTCCAAGCATGCCTAAATTTAGATACTATCCTCATAGGAATTGATGGGATTTGTTGGAAGCGGACATTTATTTAATCTGAATGGAAAATAAAGGGGGAAAAAAGAGTAACTTTTGTTCCGGTACCCTGAAGCTGGGGATTTATTCCACTCTACATTTACCCCTCTTATGTATAAAAGACACGAGGTTCCGTTAATTTTTAGTCCAATGTAACTCCAAAATGTTGTACGAAGACAAAAATTACCTTAATTAATACAGTATAAATTAACTTCTTTATTTTCATATGTAAATTTACATTGACCTAATAGTTAAAGCTAGACCTGTCAAACGGGTCGGTCGGGTCGGGTTGTAAAAATTTACTTTCGGGTTCGGGTTGAATCGGGTCGGTCAATTTCGGGTTCGGGTTTACAAATGCTTGTTCAAGACCCAGAACTTTCGGGTTCGGGTCGACCCAACGGGTTGAGAGATTTTAAAACGCGCATTATATTTTCATTAATTTAGGTGAAAAATATACAAAATATTGGCACAAGTTAACAAATTTTCCTACGAAAGTTTATATTTTGTCAAATTCAATCATAAAATGGCGTATAATTCAAATTAAAATCATATTACACAGAACAATAGTAAAAACAACGTGTCTTTTATGCTTAAATTTTCTCATAATCTCATTTATTACTATAAATACAATGATTTTCAATCGGTCGGGTCTAAAACGGGTTCGGTCGGGTTTTGACCCATTCCTTTTCGGGTTGTTCGGGTTCGGATAAAATCGGGTTACGGGTCACAAAATCTTGTTCAGGACCCAGTAATTTCGGGTCGGGTTCGGGTCGGTTTTCGGGTCGGGTCGATTTTTGACAGCTCTAGTTAAAGCCTAATGTGTGTTCAGCACAGAAGTGAGAATGACAAATTTAGCGATTGTCAGGGACTATGTTACTCAGACTCGGGTATGAGTGTCGGATACGGGTACGTGTCCAAGTGTCCGACACGGCTAAATTGAGGAAAATTTCCTTAATTTTAGACCAAAATGAAGTGTCGGAGTGTCCATACCCATGTCCAAGTGTCGAGGATCCGACACGGGTACTTGAGGTAAAACGAAGAGTCCGAGTAACATAGGTCAGGGACTTGCACTCTTTATTTGATCTGGGATAAAAAAAAGCTCGAAGAAAAAGATGAAGAAATTTGTTGCTTAGACTATCATACCTGTTTGATGATTGTCTGTGTTATCTTACACTTTAGAACTGGTTAATTTGATTTATTTGTTTTCTCTCCTTGATTGTTTCGGGTGTTAATAATTGAAATTAGTTATTAGCTAGTAATTATATATTATTTGTTTGGTTTGGTTGGAATGAAATCAGTGGTGTTTGGCCAATAATTGCCATTGTTGGCATATGATCGGTCTTGTTATTCTGAACTTCTGGTGGATCATATTTTATTGCTTGTATTATGTTGATTATAATGATAATTTGGTTCATTAGAAGGAAGTTTTGGGAAATGGAGAAGGGAAAAAGGTCAGGAAAAAATATGAAAAGAACTGGGTTTTACAAATCACATGTTGAGAAATAAGAAAATTATTACTGAAACGTGTCTGAAAAAGTAAAGCATTCGAACATATTCTGGAGACACATAAAACACCTTTAACGTGGCTTGAATGAATTGATATATACAACTAAGAAGTAAATCCTGATGTGTCGAAATCCAAGATACCTTATGTACTACAAGACTAAACTAACTATGATGGCAGACTTCACTTTCTTGAGGACAAGTCAACTCTAAGAGTCTTAATATGAGGCCCTGAAATATCTAGCCTAATATAAATTTTGGTGATTAGTATTTAGTAAGCTTGTAAGGTATCTCGCAAACAAAGGTTCCTCTTAATCTAATCGTTTGCAATAAAAGGAAAATAATTCATAAAGTTGAACAAATATTTCTTGTATTGAAAACAATCACCTAGCATGGCTTAATAAATCCAAGCAACAAACTGCTAAGCATCAGGATAAGGGGGAGGGGCACTTCAGACAATGGCATTGTGATTCATTTTTAGTGACTTGCAAATAAGTTAGCTAATTTTTAGGGGAAAAACTCCATATGTAGAGCATATTAGAGAGATGGAAAATCATATTGAATGTCTTAAAGTGTTTTGTTGAGCTTTGAAGAGTTCATTGGGAGAGAATCAAGCCTCTCGAAAGCTTGAACATCATTTGCATTTTCTGTAATTTCCGGTTTATTAATTAAGATCCTCTTCTTCTTCTTTATAAATTTATAATATGCATATTTGATGTCTAAGCTATGTTAATTTACAGCACAAACCTTATGCCTCTTACACAATATAGGAAACATAATAAATAACTCATAGTATTTGGACAAAAAATATAATAAGTTAACTTTCATAGCTAGCTAATGATTTTTAATAATGAAAAGGTTAAATAAGCTCTTACCTTTAATTTTCATAAAAATCCAATTTGCTGCTACTTTGAACACAGTGGACATTATGCCAATCCAAATTAGCTGCTGCTTCTTTGTTGATCAAACTCGCGAATGGAAAACGCAACTTTACCTATTGCACCAAACGATGATGCTTGAACTCGAACTTGTGGCCAAGTTTCTGTTCCTTGGTTTGATGAGCTACGCCTAAAATGTTGCATGTCTGCTTTCTCTCTCAAACAGCTGAAGTTTCCACCAGAAATTACCTTAATTTGTAAAGCTTGCCAAACCCGATAATAAAAGAGCTTAACCAAGGGCGTGTTCGATACATTTTCAGTTTCCAGTTTTCAATTATGAAAAAACTACAAACTGGTTTCGGTTTTAGTTTTTACTTGTAAAAACACTTATCACAATGTTAGTTTTTTGTTCATCCAATACTACTACTCCGACTCCATTTTTCAGGATCTAGCACATACAAACTTCATTTTCACATATATTACCATTACGAATTGAACTTTCCCTGAAGCTAAATATAATAATATCTCTAAAGACTAAAGCAATACTTTATAATTCATCCATAACTATATACTAAAAATACACAATAGGAATGACATGCGTCATCTCATGGTGAGTCCTTGGTTTTCTATTTTCAATTTTATTAAAATACAATTTTATTAAAATACTTCTATGTTAAGAACTTTTGAAACTCAAGATTTTCTAAAAAAAATATTTTCTGTCATTCTACTCCGTATATTATGGGATATAATATATGGCAAGAATCTACACGTAAAACTTTATGCTTATATGGATTTGAAAAATATATGTTGAACGTGGTAAAAATCTCAAAGTACAGTTTACTGATTTCCTGATATTTTTACTTAATACAGAGTACAGTTTACTGATTACTCCCTCTGTTACTTTTAAATGCATCCTTTTGACTTCGGCACTATTCATATACTTCCTCCACTCCTTAAATAATGCACCATGTTGGCTTTTATGCTTCCCAGCACATGACTTTGACTCGTTATATCTTGAATTTGCATAAATAAAATTATAAAAAAAATTGATATTTAGAAAGTTTATATTGATACGTATCTAACAATATCCTATATGATTACATTTTTTCTTACGTATAAATTACAAAAGATAGTCAAAGGCATAGTGTGAATAGTGTAAAAGTCAAAATGGGTGCGATATTTGGGGAACGGAGGAAGTACTATGCTTGACTCGAATTTTTTACCGATATATAAGAATTAAATGTCATTGGATTAGTCACAATACATATTTTTCATAATATCAACTTTTTATAATTTTATAAAATAGAAATTTGAGATATAAAGGTCAAATGATGCGTTGGCACGTGTGCCGGTCCAAGTAACGCGTTTAAAAAAGAAACAGAAGGAGTTATTGGTTAACTAAATTTTCTTCTTAAATTATACAATTCGTACATAAAATAATGAAATTTATGTCAGTGAAGCTTTTTAGGGAATAATTTCAAACTATTTGTAACGATCCGGGGCGTTAAATATTGTAATCAAGCCAAATTCTATGGTAACAATAATTTAAAGCAACCTTGTGATAAACAGACTTTTCTAAATAAAAACAGTGTAAAGAAAATTCAATACTTGAGGCCTACCATGTCGATATCAAAAGATGATGGAGAATGAGGATGGGTGATAAAGAGACCAGTTTCATGTGTAAAGGAACAAGTAGACATGACAAAGTTAAAAGATTTGGCCATTAGAAAATCACATTGATCATTTGATCGTGCGTAAATTTTCTTAAAAAGTAAATAAATTGATGTATAAATAATACTTCCTCCGTTTTATTGTATATGCAACGTTTCTGTTTTATATTATTCACATGCTATAGTTTAACTACCTTTGGTGATTTATACTTAAAGAAAAACAAAGTCATATGGGATCTTGTTAGAATCTTCCCCATATATAGTTTCAAAATATCAACTTTTTATAATTTTTAATCATCAACAATTAAAGATACATAGTGTTAATGATTGAAATTGTTTATTGGTAAGCAAACAAGTAGAAACGTTGCATCTAATAAAGTAGGAAACAGAAAAATAGAAGCAAAACCCAATTTTTAGATTCAATTATCCAACTAATAGGATTACATGAACCCTCTATCAAGAAGATGAACAGACTCCCAAACAATTTAATGAATAAGAAAAGAGAGAAAAGGCAGAAAATGATATATTTACCACTGTTCTTTTTTAGCACTCTTATTTCTTGTAATGAAGTTTTACTTCACGGAAATCTGTTTTAGAAGCAATATGTATGAGCATAAACTGTGGATGCTTGCTATTGGTTGACCAGACTTGAATCTCTCTCCTTGATAGCCTTCTCGAGAGAAAGAATTGGTTGGTTTGCAGACACTTCTCTTGATTTTCCTTGCTATTTTTTGTCTGTAGCCAACCTCTTAAAAGATTTCTATGTTCTGTTACTACTTTCATCTGGAAGGTCTGGCTTCTAATAGTGGCTGATTTGATTTGCGCGCGCACACAGAGTTCCTTTTGCATTAATTAAGAAAAAATGTTTTATTTAAATTTTCTCACAGTTTAAATTGTAATAGCCGCCATCACGAGTTCGTGAGGTGTTGGTTATGGGAGAGCATATGCTTTGGGGAGTAGGAATAATTTTTCTAACTGCCTAGTTTATTTGGATACCATTTTGACTCTGTGATAAAGCTTTGGCATCATATCTGTAACCAACTATGTTCAAACGTTGTCTCTTATCCATTATGTAAATTTATAAGAGCCTTAAACGGAATACATTTTCTTGGTAGTCTTTGATGTTTTGTGGATGATTTGGTTGGAGAGATATGATTGGTGTTTCTGTATTGAATATTTGAACGGCTAGTTAGGCTTCTTGGTGGAAGTGGGCTGTGTGTTTAGTGTCTCTTTAAGCTAATGAGGTCCCTCTTAAATTCAACAATGTGGTTTGGGTAATTTTGGTTGATTTCCTTTCACTTTGTTTGATGAATTCATTGTTGTTTGAAAAAGAAAGAACTTTAATTTGACTGACATAGTCTTTTGTCAGGGGCTGCTACACCTTTTAGCTTTCTATCTAATTCATGGCTCTTATGTGATTTTTCTTGAAGGTTATGGGGGAAAAAAATAGTTTAGTTGGTAGTCCAGACCCATGTAAAAGAATCCTTTTTAAGTCTCCAGTTTCTGTTCGTCACTATTGCACTCAGTTGTAAAATACTCTCCACTATAAGGAGTTATAACTGAAGTTATTGGTCAGTAGCAAAATTTTAAATTAATACTAATGCATCAGATATGGAATAATTTATTGAGAGGTGACCTGGTAACTTTGACTGATCTGTGATACAGGTCCTTGATCAAGATGGGGAAAATGTGTCAGTGCTGGTACAACGTGCACTCTTGTACGAGAGCATGGAGAAATATAGGCTCGGAGCAGATGACCTTAGAACTGTGATGAAACTTGATCCATCAAACAGAGTTGCAAGGAGTACTATTCATCGTTTGAACAAAATGGCTGATTAGAGAAGTTGTGTTACAGAAATTTATAGCTTACTGATTTGGCTGTAAGTTCTTATACCTTAAATGTTTATAGGATTGTCACAATAATGTGCTATCCCCTTTCACCAAGGGTGGACATATAAAAAGAAAATGTCTCCCATCAATACATAATATTCCTGTATCAGTTTAACTTGTATGATTTCCTGTATCAGTCAGTTTTGTATTTCCTCATTTTGTTCAGATGTAAACTGATGAGTGATTTTTTTTTTTTTTACACTAAGAGACGATGAGTGATTTTGTGTACTACATTGAGATTTATTTTAAGATATTGTTCTTCCTTGGCAAATGCTGATGAAAAAAAAAAGATAATTGTTTGACTTTTGTCCCCATGAGAGATATGTTGCTTATGGTCTAATCTAGTTTGATAAAGTGCATAATCAAGTGTCAGATTTGTAGTTAGTGAAATGAAGTGTTGCCAAATTTGACAAATTTCCC

mRNA sequence

GATGCGACTGACACGAGCGAACGACACCACACGGCAAAGCTCCATCTTAATTCACTAGACAGTAGACATTCACTTGCGCGGCATTCGGGTGTATATACAGGCTGCTACATCTGTCATAATTATTCTCTCTCTTTCATCCATTCCACTTTTCTTCCTCAGACCATCTCCGATTAACAACCTTATTTCGGATCTCCTGTTCGTAAGATCATATCAACATCAGATCTTGTTCAATAATTCGTCATCTGAGGTACATTTTCAATTTCACTTTTGAAACTTTCTTCAATTTTATTGGCAATAAGTTTTACTGATCAAAATTATACGCAATAATGAATTCCAATTACGGCAAGAATGGTACGAACAATTTCGATTTTGATTTAGGAATCCGATCAAATTTTCCTAAATCCCTAAATGATCAGAAAAACAAATCGAATTCTTACTCATACATGTCATCTGCAACCTCTTCGTTGTCGCAATCGAAACCTGCCACCACAACGCCGTCATGGCAGCCTGGGAAGCCGTCGTGGACGCACCAGCCCGCGCCGGGTAACAACGGGGTGACTCGATCCGAGTTGGGCGGTCCTGCTTCCATGGTGGGGGATATCTTTGGGAAGAGTTGGAACTCTCCTAAGCCTGCCACTTCTGGGCAGAGTGTTAACATTGGGGTTGTTAATAAGAACCCTAACTTGTTTGGGGATTTGGTGGGTTCTGCGTTGGGGCAGAACAAAAGTAGTAGTAATGTTCCCTTGAAAAGTGCTGCTCCTGTTAAGAGCTCGTTTTCGATGGGGGGTGTGGCGGATTCGCTGCCGAAAACGAATAATAGTAATGTGGGGAAGAATGGTGCTGGTGCTGGATTGGGTTCTTCCCAGAGCTTTGCAAGCTTTGGAGGTGCAACAAATGGTAGTAGTCTTTATGGGAATACTGGTGTGAACAAGAGTTCAAGTATGGGTGGTGGTTCAATGCGGAGTGTAGCTGGTGGAAGTGGTGGTGGTGGTATTGGAACTGGGATGAGCTCCAATAAAGACCCATTTGGTTCGTTGGTTGATTTTTCAGCGAAACCTATGGGTGGTGGTAGTCTTAATTCATCTTCCAAAGCTACTGCTTCTACTTCTTCGGAGGACTTGGGGTTTGGGGATTTCCAAAATGCATCAAAATCAAATACATCCACATTTCCTTCTGGAAACGGCAACTCCTGGGGATCTAGTTCGGGTGCAGTTCCACAAATGGATAGTTTTGCAGCTTTTGCCCCTCAGAAGAATCCTGCACCTGTACAACCTAGTTGTGGTGATTCATTTGACATGTTTTTCTCACCATCAGCAGCTTCTGGTGGTAGCGGCGATGCTCCAGTATCAGATCATGCTGCTGGAGGAAACCAGTTTTCAGGCGGGGACAATTGGGGTTTTGAATCAGAATATGGAGGACATGATGGGGGTAGTACTACTGAGATTGAAGGGCTTCCACCACCTCCAGCTGGTGTTTCAGCTTCTACTGCAAAGTCTAAAGGTCTGGATAACTATAAACAAGGGCAGTTTGCTGATGCTATAAAGTGGCTTTCTTGGGCTGAAGTTCTTCTTGAGAAAGCTGGCGAGGCTGCTGGCACAATGGAGGTCTTGTCTTGTAGGGCCTCATGCTACAAGGAAGTTGGGGAGTACAAGAAGGCTGTTGCTGATTGTACAAAGGTCCTTGATCAAGATGGGGAAAATGTGTCAGTGCTGGTACAACGTGCACTCTTGTACGAGAGCATGGAGAAATATAGGCTCGGAGCAGATGACCTTAGAACTGTGATGAAACTTGATCCATCAAACAGAGTTGCAAGGAGTACTATTCATCGTTTGAACAAAATGGCTGATTAGAGAAGTTGTGTTACAGAAATTTATAGCTTACTGATTTGGCTGTAAGTTCTTATACCTTAAATGTTTATAGGATTGTCACAATAATGTGCTATCCCCTTTCACCAAGGGTGGACATATAAAAAGAAAATGTCTCCCATCAATACATAATATTCCTGTATCAGTTTAACTTGTATGATTTCCTGTATCAGTCAGTTTTGTATTTCCTCATTTTGTTCAGATGTAAACTGATGAGTGATTTTTTTTTTTTTTACACTAAGAGACGATGAGTGATTTTGTGTACTACATTGAGATTTATTTTAAGATATTGTTCTTCCTTGGCAAATGCTGATGAAAAAAAAAAGATAATTGTTTGACTTTTGTCCCCATGAGAGATATGTTGCTTATGGTCTAATCTAGTTTGATAAAGTGCATAATCAAGTGTCAGATTTGTAGTTAGTGAAATGAAGTGTTGCCAAATTTGACAAATTTCCC

Coding sequence (CDS)

ATGAATTCCAATTACGGCAAGAATGGTACGAACAATTTCGATTTTGATTTAGGAATCCGATCAAATTTTCCTAAATCCCTAAATGATCAGAAAAACAAATCGAATTCTTACTCATACATGTCATCTGCAACCTCTTCGTTGTCGCAATCGAAACCTGCCACCACAACGCCGTCATGGCAGCCTGGGAAGCCGTCGTGGACGCACCAGCCCGCGCCGGGTAACAACGGGGTGACTCGATCCGAGTTGGGCGGTCCTGCTTCCATGGTGGGGGATATCTTTGGGAAGAGTTGGAACTCTCCTAAGCCTGCCACTTCTGGGCAGAGTGTTAACATTGGGGTTGTTAATAAGAACCCTAACTTGTTTGGGGATTTGGTGGGTTCTGCGTTGGGGCAGAACAAAAGTAGTAGTAATGTTCCCTTGAAAAGTGCTGCTCCTGTTAAGAGCTCGTTTTCGATGGGGGGTGTGGCGGATTCGCTGCCGAAAACGAATAATAGTAATGTGGGGAAGAATGGTGCTGGTGCTGGATTGGGTTCTTCCCAGAGCTTTGCAAGCTTTGGAGGTGCAACAAATGGTAGTAGTCTTTATGGGAATACTGGTGTGAACAAGAGTTCAAGTATGGGTGGTGGTTCAATGCGGAGTGTAGCTGGTGGAAGTGGTGGTGGTGGTATTGGAACTGGGATGAGCTCCAATAAAGACCCATTTGGTTCGTTGGTTGATTTTTCAGCGAAACCTATGGGTGGTGGTAGTCTTAATTCATCTTCCAAAGCTACTGCTTCTACTTCTTCGGAGGACTTGGGGTTTGGGGATTTCCAAAATGCATCAAAATCAAATACATCCACATTTCCTTCTGGAAACGGCAACTCCTGGGGATCTAGTTCGGGTGCAGTTCCACAAATGGATAGTTTTGCAGCTTTTGCCCCTCAGAAGAATCCTGCACCTGTACAACCTAGTTGTGGTGATTCATTTGACATGTTTTTCTCACCATCAGCAGCTTCTGGTGGTAGCGGCGATGCTCCAGTATCAGATCATGCTGCTGGAGGAAACCAGTTTTCAGGCGGGGACAATTGGGGTTTTGAATCAGAATATGGAGGACATGATGGGGGTAGTACTACTGAGATTGAAGGGCTTCCACCACCTCCAGCTGGTGTTTCAGCTTCTACTGCAAAGTCTAAAGGTCTGGATAACTATAAACAAGGGCAGTTTGCTGATGCTATAAAGTGGCTTTCTTGGGCTGAAGTTCTTCTTGAGAAAGCTGGCGAGGCTGCTGGCACAATGGAGGTCTTGTCTTGTAGGGCCTCATGCTACAAGGAAGTTGGGGAGTACAAGAAGGCTGTTGCTGATTGTACAAAGGTCCTTGATCAAGATGGGGAAAATGTGTCAGTGCTGGTACAACGTGCACTCTTGTACGAGAGCATGGAGAAATATAGGCTCGGAGCAGATGACCTTAGAACTGTGATGAAACTTGATCCATCAAACAGAGTTGCAAGGAGTACTATTCATCGTTTGAACAAAATGGCTGATTAG

Protein sequence

MNSNYGKNGTNNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTPSWQPGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNKNPNLFGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSLPKTNNSNVGKNGAGAGLGSSQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDPFGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWGSSSGAVPQMDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAGGNQFSGGDNWGFESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMAD

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11340	Spo11340	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11340.1	Spo11340.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11340.1.utr5p.1	Spo11340.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11340.1.CDS.2	Spo11340.1.CDS.2	CDS
Spo11340.1.CDS.1	Spo11340.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11340.1.utr3p.1	Spo11340.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11340.1.exon.2	Spo11340.1.exon.2	exon
Spo11340.1.exon.1	Spo11340.1.exon.1	exon

Homology

[Close]

BLAST of Spo11340.1 vs. NCBI nr
Match: gi|902197759|gb|KNA13511.1| (hypothetical protein SOVF_115660 [Spinacia oleracea])

HSP 1 Score: 954.9 bits (2467), Expect = 5.600e-275
Identity = 506/509 (99.41%), Postives = 506/509 (99.41%), Query Frame = 1


		  
Query: 1   MNSNYGKNGTNNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTPSWQ 60
           MNSNYGKNGTNNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTPSWQ
Sbjct: 1   MNSNYGKNGTNNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTPSWQ 60

Query: 61  PGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNKNPNL 120
           PGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNKNPNL
Sbjct: 61  PGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNKNPNL 120

Query: 121 FGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSLPKTNNSNVGKNG--AGAGLGS 180
           FGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSLPKTNNSNVGKNG  AGAGLGS
Sbjct: 121 FGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSLPKTNNSNVGKNGAGAGAGLGS 180

Query: 181 SQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDPFGSLV 240
           SQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDPFGSLV
Sbjct: 181 SQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDPFGSLV 240

Query: 241 DFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWGSSSGAVPQ 300
           DFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWGSSSGAVPQ
Sbjct: 241 DFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWGSSSGAVPQ 300

Query: 301 MDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAGGNQFSGGDNWGF 360
           MDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAGGNQFSGGDNWGF
Sbjct: 301 MDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAGGNQFSGGDNWGF 360

Query: 361 ESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKA 420
           ESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKA
Sbjct: 361 ESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKA 420

Query: 421 GEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLG 480
           GEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLG
Sbjct: 421 GEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLG 480

Query: 481 ADDLRTVMKLDPSNRVARSTIHRLNKMAD 508
           ADDLRTVMKLDP NRVARSTIHRLNKMAD
Sbjct: 481 ADDLRTVMKLDPLNRVARSTIHRLNKMAD 509

[Close]

BLAST of Spo11340.1 vs. NCBI nr
Match: gi|731375020|ref|XP_010667124.1| (PREDICTED: uncharacterized transmembrane protein DDB_G0289901 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 739.2 bits (1907), Expect = 4.900e-210
Identity = 406/513 (79.14%), Postives = 436/513 (84.99%), Query Frame = 1


		  
Query: 1   MNSNYGKNGTNNFDFDLGIRSNFPKSLNDQKNKSNS----YSYMSSATSSLSQSKPATTT 60
           MNSNYGKN  NNFDFDLGI SN  KSLNDQKN SNS    +SYMSS T S SQ KP  TT
Sbjct: 1   MNSNYGKNSMNNFDFDLGIGSNRSKSLNDQKNNSNSNSNSHSYMSSKTPSFSQPKPGATT 60

Query: 61  PSWQPGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNK 120
           P WQPGKPSWTHQPAP N GVTRSELGGP++MVGDIFGK+WNS  P T+GQS NIGVVNK
Sbjct: 61  PYWQPGKPSWTHQPAPSNTGVTRSELGGPSTMVGDIFGKNWNSAAP-TTGQSTNIGVVNK 120

Query: 121 NPNLFGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSLPKTNNSNVGKNGAGAGL 180
           NPNLFGDLV SALGQNKSSSNVPLK+AAPVKSSFSMGGVADSLPK++N+NV KNG  AGL
Sbjct: 121 NPNLFGDLVSSALGQNKSSSNVPLKNAAPVKSSFSMGGVADSLPKSSNNNVSKNGV-AGL 180

Query: 181 GSSQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDPFGS 240
           GSSQ + SFGG TN SS+YG   VNKSSSMGG SMRS  GG GG GIG GMSSNKDPFGS
Sbjct: 181 GSSQGYGSFGGTTNSSSVYGINSVNKSSSMGGSSMRSAGGGVGGSGIGVGMSSNKDPFGS 240

Query: 241 LVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWGSSSGAV 300
           L D S+K   GGSLNSS+KATASTSSED  FGDFQNA+KSNTSTFPSGN  SWG++SG++
Sbjct: 241 LFDLSSKTTSGGSLNSSTKATASTSSEDFAFGDFQNATKSNTSTFPSGNSTSWGANSGSI 300

Query: 301 PQMDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAGGNQFSGGDNW 360
           P+MD+FA     +NPAPV  + GDSFDM FS S  +GGS  A  SD  AGG QFSGGD+W
Sbjct: 301 PEMDNFAT----QNPAPVHSTGGDSFDMLFSSSTTAGGSSGAAASDSVAGGQQFSGGDDW 360

Query: 361 GFESEY-GGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLL 420
           GF+SE+ GGHDGG+TTEIEGLP PPAGVSASTAK KGLDNYKQGQFADAIKWLSWAE LL
Sbjct: 361 GFDSEFVGGHDGGNTTEIEGLPAPPAGVSASTAKGKGLDNYKQGQFADAIKWLSWAEALL 420

Query: 421 EKAGEAAGT-MEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEK 480
           EKAGE AGT +EVL+CRASCYKEVGEYKKAVADCTKVLD DG NV+VLVQRALLYESMEK
Sbjct: 421 EKAGETAGTFVEVLTCRASCYKEVGEYKKAVADCTKVLDNDGANVAVLVQRALLYESMEK 480

Query: 481 YRLGADDLRTVMKLDPSNRVARSTIHRLNKMAD 508
           YRLGADDLRTVMKLDP NRVARSTIHRLNKMAD
Sbjct: 481 YRLGADDLRTVMKLDPGNRVARSTIHRLNKMAD 507

[Close]

BLAST of Spo11340.1 vs. NCBI nr
Match: gi|870842092|gb|KMS95595.1| (hypothetical protein BVRB_006840 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 687.2 bits (1772), Expect = 2.200e-194
Identity = 374/470 (79.57%), Postives = 403/470 (85.74%), Query Frame = 1


		  
Query: 40  MSSATSSLSQSKPATTTPSWQPGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNS 99
           MSS T S SQ KP  TTP WQPGKPSWTHQPAP N GVTRSELGGP++MVGDIFGK+WNS
Sbjct: 1   MSSKTPSFSQPKPGATTPYWQPGKPSWTHQPAPSNTGVTRSELGGPSTMVGDIFGKNWNS 60

Query: 100 PKPATSGQSVNIGVVNKNPNLFGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSL 159
             P T+GQS NIGVVNKNPNLFGDLV SALGQNKSSSNVPLK+AAPVKSSFSMGGVADSL
Sbjct: 61  AAP-TTGQSTNIGVVNKNPNLFGDLVSSALGQNKSSSNVPLKNAAPVKSSFSMGGVADSL 120

Query: 160 PKTNNSNVGKNGAGAGLGSSQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSG 219
           PK++N+NV KNG  AGLGSSQ + SFGG TN SS+YG   VNKSSSMGG SMRS  GG G
Sbjct: 121 PKSSNNNVSKNGV-AGLGSSQGYGSFGGTTNSSSVYGINSVNKSSSMGGSSMRSAGGGVG 180

Query: 220 GGGIGTGMSSNKDPFGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTS 279
           G GIG GMSSNKDPFGSL D S+K   GGSLNSS+KATASTSSED  FGDFQNA+KSNTS
Sbjct: 181 GSGIGVGMSSNKDPFGSLFDLSSKTTSGGSLNSSTKATASTSSEDFAFGDFQNATKSNTS 240

Query: 280 TFPSGNGNSWGSSSGAVPQMDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAP 339
           TFPSGN  SWG++SG++P+MD+FA     +NPAPV  + GDSFDM FS S  +GGS  A 
Sbjct: 241 TFPSGNSTSWGANSGSIPEMDNFAT----QNPAPVHSTGGDSFDMLFSSSTTAGGSSGAA 300

Query: 340 VSDHAAGGNQFSGGDNWGFESEY-GGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQ 399
            SD  AGG QFSGGD+WGF+SE+ GGHDGG+TTEIEGLP PPAGVSASTAK KGLDNYKQ
Sbjct: 301 ASDSVAGGQQFSGGDDWGFDSEFVGGHDGGNTTEIEGLPAPPAGVSASTAKGKGLDNYKQ 360

Query: 400 GQFADAIKWLSWAEVLLEKAGEAAGT-MEVLSCRASCYKEVGEYKKAVADCTKVLDQDGE 459
           GQFADAIKWLSWAE LLEKAGE AGT +EVL+CRASCYKEVGEYKKAVADCTKVLD DG 
Sbjct: 361 GQFADAIKWLSWAEALLEKAGETAGTFVEVLTCRASCYKEVGEYKKAVADCTKVLDNDGA 420

Query: 460 NVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMAD 508
           NV+VLVQRALLYESMEKYRLGADDLRTVMKLDP NRVARSTIHRLNKMAD
Sbjct: 421 NVAVLVQRALLYESMEKYRLGADDLRTVMKLDPGNRVARSTIHRLNKMAD 464

[Close]

BLAST of Spo11340.1 vs. NCBI nr
Match: gi|661897115|emb|CDO98827.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 493.0 bits (1268), Expect = 6.100e-136
Identity = 311/531 (58.57%), Postives = 377/531 (71.00%), Query Frame = 1


		  
Query: 1   MNSNYGKNGT-----NNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATT 60
           MNSNYGK+ T     N+FDFDLG+  +  +SLNDQKN+++SY   SSA     Q+KP+TT
Sbjct: 1   MNSNYGKSNTKSGSLNSFDFDLGLGKSGSRSLNDQKNQTSSYGSYSSA-----QAKPSTT 60

Query: 61  TPSW--QP-GKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIG 120
            PSW  QP  KPSWTHQPA          L GP SMVGDIFGKSW S  PA+S  S + G
Sbjct: 61  -PSWTHQPINKPSWTHQPAAPAQSAGTGSLSGPTSMVGDIFGKSWGSSAPASSLNSGS-G 120

Query: 121 VVNKNPNLFGDLVGSALGQNKSSSNVPLKSAAPV--KSSFSMGGVADSLPKTNNSNVGKN 180
           VVNK+PNLFGDL+GSALGQNK +SNVPLK+AAP   KSSFSMGG+AD LPKT NS     
Sbjct: 121 VVNKDPNLFGDLLGSALGQNKGNSNVPLKNAAPASNKSSFSMGGMADELPKTGNSTK--- 180

Query: 181 GAGAGLGSSQSFASF-GGATNGSSLYGNTGVN----KSSSMGGGSMRSVAGGSGGGGIGT 240
            +    GSS++F ++  G ++ +S  GN  +N    K +++GG SM+S+AGG G GG+G 
Sbjct: 181 -SSGNWGSSETFGTYTSGFSSNNSDRGNVNLNGNASKGTNLGGPSMKSMAGGGGLGGMG- 240

Query: 241 GMSSNKDPFGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSN-----TST 300
              SNKDPFGSLVDFS+KP   G++ S SK +AS+   D  F  FQ+ASK++     + +
Sbjct: 241 ---SNKDPFGSLVDFSSKP--SGNMKSESKGSASSKVGDDAFQSFQSASKTSGAAHPSGS 300

Query: 301 FPSGNGNSWGSSSG-AVPQMDSFAAFAPQKNP--APVQPSCG-DSFDMFFSPSAASGGSG 360
           F SG  NS GS +G +   +D F  F+    P   P   S G DSFD  F  +  SG   
Sbjct: 301 FTSGKSNSTGSGAGGSYSNVDDFGFFSTPSQPHSRPSGQSTGVDSFDALFMTTPGSGAEF 360

Query: 361 DAPVSDHAAGGNQFSGGDNWGFESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNY 420
            +  S         SGGD+WGFES++ GHD G TTE+EGLPPPPAGVSASTAK+KGLDNY
Sbjct: 361 KSQDS---------SGGDDWGFESDFNGHDTGGTTELEGLPPPPAGVSASTAKNKGLDNY 420

Query: 421 KQGQFADAIKWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDG 480
           KQGQFADAIKWLSWA +LLEKAG   GTM+VL+CRA+CYKEVGEYKKAVADCT+ L+QD 
Sbjct: 421 KQGQFADAIKWLSWAVILLEKAGGDTGTMDVLTCRAACYKEVGEYKKAVADCTEALEQDD 480

Query: 481 ENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMAD 508
           +NV++LVQRALLYESMEKY+LGA+DLRTVM++DP NRVARSTIHRL KMAD
Sbjct: 481 KNVNILVQRALLYESMEKYKLGAEDLRTVMRIDPGNRVARSTIHRLTKMAD 505

[Close]

BLAST of Spo11340.1 vs. NCBI nr
Match: gi|565375527|ref|XP_006354280.1| (PREDICTED: uncharacterized transmembrane protein DDB_G0289901 [Solanum tuberosum])

HSP 1 Score: 479.9 bits (1234), Expect = 5.300e-132
Identity = 299/521 (57.39%), Postives = 369/521 (70.83%), Query Frame = 1


		  
Query: 1   MNSNYGKNGT--NNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSA-TSSLSQSKPATTTP 60
           MNSNYGK+G+  NNFDFDLG+ S   +SLNDQKNK++SYS  SS+ T S +QSKP + + 
Sbjct: 1   MNSNYGKSGSSVNNFDFDLGLNSGRSRSLNDQKNKTSSYSSSSSSYTYSSTQSKPNSGSS 60

Query: 61  SWQPGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPAT-SGQSVNIGVVNK 120
             QP K +WTHQP   ++G        P SM GDIFGKSW S  P+T S  + ++G+ NK
Sbjct: 61  WTQPNKSTWTHQPVGSSSG--------PNSMAGDIFGKSWGSSTPSTTSNVASSVGIANK 120

Query: 121 NPNLFGDLVGSALGQNKSSSNVPLKSAAPV--KSSFSMGGVADSLPKTNNS-NVGKNGAG 180
           NPNLFGDLV SALG NKS+SN PLK+AAP   KS+FSM G+ D+LPK+ NS   G +   
Sbjct: 121 NPNLFGDLVSSALGGNKSNSNAPLKNAAPTANKSAFSMSGMTDNLPKSGNSVKTGGSWGS 180

Query: 181 AGLGSSQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDP 240
           AG   S S  ++      +S+  + G +K  ++GG S++++A    G G+G GM  NKDP
Sbjct: 181 AGNSGSGSAGAYNAYNFSASVNQSGGNSKIPNLGGTSLKNMA----GSGVGGGMGVNKDP 240

Query: 241 FGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSG-------NG 300
           FGSLVDFS+KP  G ++ SSSK T + SS D  FG+FQNA+KS  S FP+        N 
Sbjct: 241 FGSLVDFSSKP--GPNMKSSSKETKNNSSGDDVFGNFQNATKSGGSEFPADPFPTSNINA 300

Query: 301 NSWGSSSGAVPQMDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAG 360
           ++  +S GA  ++D F     Q  P   Q S    FD  FS + AS G   A VS++   
Sbjct: 301 STGLNSGGAYSKVDDFGFTNTQSQPFTTQSSGVGDFDSLFSSTNASSGEA-AGVSEN--- 360

Query: 361 GNQFSGGDNWGFESEY-GGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAI 420
             QF+GGD+WGFESE+ G +D   TTEIEGLPPPP+GVSAS AK+KG+DN+KQGQ+ DAI
Sbjct: 361 -QQFTGGDDWGFESEFVGANDSSGTTEIEGLPPPPSGVSASAAKNKGMDNHKQGQYGDAI 420

Query: 421 KWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQR 480
           KWLSWA +LLEKAG+ AG MEVLS RASCYKEVGEYKKAVADCTKVL+QDG+NVSVLVQR
Sbjct: 421 KWLSWAVILLEKAGDEAGVMEVLSSRASCYKEVGEYKKAVADCTKVLEQDGKNVSVLVQR 480

Query: 481 ALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMA 507
           ALLYESMEKY+LGA+DLRTVMK+DP NRVARST+HRL KMA
Sbjct: 481 ALLYESMEKYKLGAEDLRTVMKIDPGNRVARSTVHRLTKMA 502

[Close]

BLAST of Spo11340.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1W4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115660 PE=4 SV=1)

HSP 1 Score: 954.9 bits (2467), Expect = 3.900e-275
Identity = 506/509 (99.41%), Postives = 506/509 (99.41%), Query Frame = 1


		  
Query: 1   MNSNYGKNGTNNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTPSWQ 60
           MNSNYGKNGTNNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTPSWQ
Sbjct: 1   MNSNYGKNGTNNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTPSWQ 60

Query: 61  PGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNKNPNL 120
           PGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNKNPNL
Sbjct: 61  PGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNKNPNL 120

Query: 121 FGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSLPKTNNSNVGKNG--AGAGLGS 180
           FGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSLPKTNNSNVGKNG  AGAGLGS
Sbjct: 121 FGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSLPKTNNSNVGKNGAGAGAGLGS 180

Query: 181 SQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDPFGSLV 240
           SQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDPFGSLV
Sbjct: 181 SQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDPFGSLV 240

Query: 241 DFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWGSSSGAVPQ 300
           DFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWGSSSGAVPQ
Sbjct: 241 DFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWGSSSGAVPQ 300

Query: 301 MDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAGGNQFSGGDNWGF 360
           MDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAGGNQFSGGDNWGF
Sbjct: 301 MDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAGGNQFSGGDNWGF 360

Query: 361 ESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKA 420
           ESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKA
Sbjct: 361 ESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKA 420

Query: 421 GEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLG 480
           GEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLG
Sbjct: 421 GEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLG 480

Query: 481 ADDLRTVMKLDPSNRVARSTIHRLNKMAD 508
           ADDLRTVMKLDP NRVARSTIHRLNKMAD
Sbjct: 481 ADDLRTVMKLDPLNRVARSTIHRLNKMAD 509

[Close]

BLAST of Spo11340.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DXL5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006840 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 1.500e-194
Identity = 374/470 (79.57%), Postives = 403/470 (85.74%), Query Frame = 1


		  
Query: 40  MSSATSSLSQSKPATTTPSWQPGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNS 99
           MSS T S SQ KP  TTP WQPGKPSWTHQPAP N GVTRSELGGP++MVGDIFGK+WNS
Sbjct: 1   MSSKTPSFSQPKPGATTPYWQPGKPSWTHQPAPSNTGVTRSELGGPSTMVGDIFGKNWNS 60

Query: 100 PKPATSGQSVNIGVVNKNPNLFGDLVGSALGQNKSSSNVPLKSAAPVKSSFSMGGVADSL 159
             P T+GQS NIGVVNKNPNLFGDLV SALGQNKSSSNVPLK+AAPVKSSFSMGGVADSL
Sbjct: 61  AAP-TTGQSTNIGVVNKNPNLFGDLVSSALGQNKSSSNVPLKNAAPVKSSFSMGGVADSL 120

Query: 160 PKTNNSNVGKNGAGAGLGSSQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSG 219
           PK++N+NV KNG  AGLGSSQ + SFGG TN SS+YG   VNKSSSMGG SMRS  GG G
Sbjct: 121 PKSSNNNVSKNGV-AGLGSSQGYGSFGGTTNSSSVYGINSVNKSSSMGGSSMRSAGGGVG 180

Query: 220 GGGIGTGMSSNKDPFGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTS 279
           G GIG GMSSNKDPFGSL D S+K   GGSLNSS+KATASTSSED  FGDFQNA+KSNTS
Sbjct: 181 GSGIGVGMSSNKDPFGSLFDLSSKTTSGGSLNSSTKATASTSSEDFAFGDFQNATKSNTS 240

Query: 280 TFPSGNGNSWGSSSGAVPQMDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAP 339
           TFPSGN  SWG++SG++P+MD+FA     +NPAPV  + GDSFDM FS S  +GGS  A 
Sbjct: 241 TFPSGNSTSWGANSGSIPEMDNFAT----QNPAPVHSTGGDSFDMLFSSSTTAGGSSGAA 300

Query: 340 VSDHAAGGNQFSGGDNWGFESEY-GGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQ 399
            SD  AGG QFSGGD+WGF+SE+ GGHDGG+TTEIEGLP PPAGVSASTAK KGLDNYKQ
Sbjct: 301 ASDSVAGGQQFSGGDDWGFDSEFVGGHDGGNTTEIEGLPAPPAGVSASTAKGKGLDNYKQ 360

Query: 400 GQFADAIKWLSWAEVLLEKAGEAAGT-MEVLSCRASCYKEVGEYKKAVADCTKVLDQDGE 459
           GQFADAIKWLSWAE LLEKAGE AGT +EVL+CRASCYKEVGEYKKAVADCTKVLD DG 
Sbjct: 361 GQFADAIKWLSWAEALLEKAGETAGTFVEVLTCRASCYKEVGEYKKAVADCTKVLDNDGA 420

Query: 460 NVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMAD 508
           NV+VLVQRALLYESMEKYRLGADDLRTVMKLDP NRVARSTIHRLNKMAD
Sbjct: 421 NVAVLVQRALLYESMEKYRLGADDLRTVMKLDPGNRVARSTIHRLNKMAD 464

[Close]

BLAST of Spo11340.1 vs. UniProtKB/TrEMBL
Match: A0A068TS12_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025758001 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 4.200e-136
Identity = 311/531 (58.57%), Postives = 377/531 (71.00%), Query Frame = 1


		  
Query: 1   MNSNYGKNGT-----NNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATT 60
           MNSNYGK+ T     N+FDFDLG+  +  +SLNDQKN+++SY   SSA     Q+KP+TT
Sbjct: 1   MNSNYGKSNTKSGSLNSFDFDLGLGKSGSRSLNDQKNQTSSYGSYSSA-----QAKPSTT 60

Query: 61  TPSW--QP-GKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIG 120
            PSW  QP  KPSWTHQPA          L GP SMVGDIFGKSW S  PA+S  S + G
Sbjct: 61  -PSWTHQPINKPSWTHQPAAPAQSAGTGSLSGPTSMVGDIFGKSWGSSAPASSLNSGS-G 120

Query: 121 VVNKNPNLFGDLVGSALGQNKSSSNVPLKSAAPV--KSSFSMGGVADSLPKTNNSNVGKN 180
           VVNK+PNLFGDL+GSALGQNK +SNVPLK+AAP   KSSFSMGG+AD LPKT NS     
Sbjct: 121 VVNKDPNLFGDLLGSALGQNKGNSNVPLKNAAPASNKSSFSMGGMADELPKTGNSTK--- 180

Query: 181 GAGAGLGSSQSFASF-GGATNGSSLYGNTGVN----KSSSMGGGSMRSVAGGSGGGGIGT 240
            +    GSS++F ++  G ++ +S  GN  +N    K +++GG SM+S+AGG G GG+G 
Sbjct: 181 -SSGNWGSSETFGTYTSGFSSNNSDRGNVNLNGNASKGTNLGGPSMKSMAGGGGLGGMG- 240

Query: 241 GMSSNKDPFGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSN-----TST 300
              SNKDPFGSLVDFS+KP   G++ S SK +AS+   D  F  FQ+ASK++     + +
Sbjct: 241 ---SNKDPFGSLVDFSSKP--SGNMKSESKGSASSKVGDDAFQSFQSASKTSGAAHPSGS 300

Query: 301 FPSGNGNSWGSSSG-AVPQMDSFAAFAPQKNP--APVQPSCG-DSFDMFFSPSAASGGSG 360
           F SG  NS GS +G +   +D F  F+    P   P   S G DSFD  F  +  SG   
Sbjct: 301 FTSGKSNSTGSGAGGSYSNVDDFGFFSTPSQPHSRPSGQSTGVDSFDALFMTTPGSGAEF 360

Query: 361 DAPVSDHAAGGNQFSGGDNWGFESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNY 420
            +  S         SGGD+WGFES++ GHD G TTE+EGLPPPPAGVSASTAK+KGLDNY
Sbjct: 361 KSQDS---------SGGDDWGFESDFNGHDTGGTTELEGLPPPPAGVSASTAKNKGLDNY 420

Query: 421 KQGQFADAIKWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDG 480
           KQGQFADAIKWLSWA +LLEKAG   GTM+VL+CRA+CYKEVGEYKKAVADCT+ L+QD 
Sbjct: 421 KQGQFADAIKWLSWAVILLEKAGGDTGTMDVLTCRAACYKEVGEYKKAVADCTEALEQDD 480

Query: 481 ENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMAD 508
           +NV++LVQRALLYESMEKY+LGA+DLRTVM++DP NRVARSTIHRL KMAD
Sbjct: 481 KNVNILVQRALLYESMEKYKLGAEDLRTVMRIDPGNRVARSTIHRLTKMAD 505

[Close]

BLAST of Spo11340.1 vs. UniProtKB/TrEMBL
Match: A0A0V0IKH5_SOLCH (Putative P17/29C-like protein-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 5.700e-133
Identity = 300/521 (57.58%), Postives = 371/521 (71.21%), Query Frame = 1


		  
Query: 1   MNSNYGKNGT--NNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSA-TSSLSQSKPATTTP 60
           MNSNYGK+G+  NNFDFDLG+ S   +SLNDQKNK++SYS  SS+ T S +QSKP + + 
Sbjct: 1   MNSNYGKSGSSVNNFDFDLGLNSGRSRSLNDQKNKTSSYSSSSSSYTYSSTQSKPNSGSS 60

Query: 61  SWQPGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPAT-SGQSVNIGVVNK 120
             QP K +WTHQP   ++G        P SM GDIFGKSW S  P+T S  + ++G+ NK
Sbjct: 61  WTQPNKSTWTHQPVGSSSG--------PNSMAGDIFGKSWGSSTPSTTSNVASSVGIANK 120

Query: 121 NPNLFGDLVGSALGQNKSSSNVPLKSAAPV--KSSFSMGGVADSLPKTNNS-NVGKNGAG 180
           NPNLFGDLV SALG NKS+SN PLK+AAP   KS+FSM G+AD+LPK+ NS   G +   
Sbjct: 121 NPNLFGDLVSSALGGNKSNSNAPLKNAAPTANKSAFSMSGMADNLPKSGNSVKTGGSWGS 180

Query: 181 AGLGSSQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSNKDP 240
           AG   S S  ++      +S+  + G +K  ++GG S++++A    G G+G GM  NKDP
Sbjct: 181 AGNSGSGSAGAYNAYNFSASVNQSGGNSKIPNLGGTSLKNMA----GSGVGGGMGVNKDP 240

Query: 241 FGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSG-------NG 300
           FGSLVDFS+KP  G ++ SSSK T + SS D  FG+FQNA+KS  S FP+        N 
Sbjct: 241 FGSLVDFSSKP--GPNMKSSSKETKNNSSGDDVFGNFQNATKSGGSEFPADPFPTSNINA 300

Query: 301 NSWGSSSGAVPQMDSFAAFAPQKNPAPVQPSCGDSFDMFFSPSAASGGSGDAPVSDHAAG 360
           ++  +S GA  ++D F     Q  P+  Q S    FD  FS + AS G   A VS++   
Sbjct: 301 STGLNSGGAXSKVDDFGFTNTQSQPSTTQSSGVGDFDSLFSSTNASSGEA-AGVSEN--- 360

Query: 361 GNQFSGGDNWGFESEY-GGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAI 420
             QF+GGD+WGFESE+ G +D   TTEIEGLPPPP+GVSAS AK+KG+DN+KQGQ+ DAI
Sbjct: 361 -QQFTGGDDWGFESEFVGANDSSGTTEIEGLPPPPSGVSASAAKNKGMDNHKQGQYGDAI 420

Query: 421 KWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQR 480
           KWLSWA +LLEKAG+ AG MEVLS RASCYKEVGEYKKAVADCTKVL+QDG+NVSVLVQR
Sbjct: 421 KWLSWAVILLEKAGDEAGVMEVLSSRASCYKEVGEYKKAVADCTKVLEQDGKNVSVLVQR 480

Query: 481 ALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMA 507
           ALLYESMEKY+LGA+DLRTVMK+DP NRVARST+HRL KMA
Sbjct: 481 ALLYESMEKYKLGAEDLRTVMKIDPGNRVARSTVHRLTKMA 502

[Close]

BLAST of Spo11340.1 vs. UniProtKB/TrEMBL
Match: A0A067JYI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18923 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 7.000e-131
Identity = 313/535 (58.50%), Postives = 375/535 (70.09%), Query Frame = 1


		  
Query: 1   MNSNYGKNGT---NNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTP 60
           MNSNYGK  +   NNF+FD G+ S+ PKSLNDQKN ++SYS  SS+T++  Q KPA    
Sbjct: 1   MNSNYGKGSSSSLNNFNFDFGLGSSRPKSLNDQKNPTSSYSSYSSSTTT--QPKPA---- 60

Query: 61  SWQPGKPSWTHQPAPGNNGVTRSELGGPASMVGDIFGKSWNSPKPATSGQSVNIGVVNKN 120
            WQP KPSWTHQPAP     T S L GP SMVGDI GKSWNS   A+      IG+V KN
Sbjct: 61  -WQPNKPSWTHQPAPSQP--TWSGLNGPPSMVGDISGKSWNSSSSASG-----IGIVEKN 120

Query: 121 PNLFGDLVGSALGQ-NKSSSNVPLKSAAPV--KSSFSMGGVADSLPKTNNSNVGKNGAGA 180
           PNLFGDLV SALGQ NK +SN PLK+A P   K+++SMG +ADSLPKTNNS      +G 
Sbjct: 121 PNLFGDLVTSALGQGNKGNSNAPLKTATPTSNKTAYSMGNLADSLPKTNNSAK----SGG 180

Query: 181 GLGSSQSFASFGGATNGSS----LYGNTGVNKSSSM----GGGSMRSVAGGSGGGGIGTG 240
             GS+ +F S+    N +S      GN  VN SS+M    G  SM+S+ GGSG GG   G
Sbjct: 181 TWGSNGNFGSYSSEYNKTSSNVNAAGNGNVNVSSNMSPNLGRPSMKSMMGGSGVGG---G 240

Query: 241 MSSNKDPFGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASK-SNTSTFPSG- 300
           M  N+DPFGSLVDF +K    G+LN++SK  + T++ D  FGDFQNA+K S T+TFPSG 
Sbjct: 241 MGGNRDPFGSLVDFGSKQQ-SGNLNAASK--SGTNAGDNAFGDFQNAAKPSTTTTFPSGG 300

Query: 301 ----NGNSWGSSSGAVPQMDSFAA----FAPQKNPAPVQPSCGDSFDMFFSPSAASGGSG 360
               N +  GS++ +  ++D F      FA QK  +PVQ S GD  DMFFS S  SGG+ 
Sbjct: 301 FGVSNSSFMGSNTVSNSKIDDFGMPGMDFASQKQ-SPVQTSSGDPLDMFFSSS--SGGTA 360

Query: 361 DAPVSDHAAGGNQFSGGDNWGFESEYGG----HDGGSTTEIEGLPPPPAGVSASTAKSKG 420
            A      AG  QFS  D+WG +S +GG      GG+TTE+EGLPPPPAGV+AS AK+KG
Sbjct: 361 TASA---GAGEQQFSEVDDWGLDSGFGGGAGNDSGGATTELEGLPPPPAGVTASIAKNKG 420

Query: 421 LDNYKQGQFADAIKWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVL 480
           +DN KQGQ+ADAIKWLSWA VLLEK G+ A T EVLSCRASCYKEVGEYKKAVADCTKVL
Sbjct: 421 VDNQKQGQYADAIKWLSWAVVLLEKTGDKASTTEVLSCRASCYKEVGEYKKAVADCTKVL 480

Query: 481 DQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMAD 508
           + D  NVS+LVQRALLYESMEKY+LGA+DLRTV+K+DP+NR+A+STIHRL KM D
Sbjct: 481 EDDDGNVSILVQRALLYESMEKYKLGAEDLRTVLKIDPTNRIAKSTIHRLTKMVD 505

[Close]

BLAST of Spo11340.1 vs. ExPASy Swiss-Prot
Match: SPAG1_HUMAN (Sperm-associated antigen 1 OS=Homo sapiens GN=SPAG1 PE=1 SV=3)

HSP 1 Score: 70.1 bits (170), Expect = 7.900e-11
Identity = 48/144 (33.33%), Postives = 81/144 (56.25%), Query Frame = 1


		  
Query: 364 GHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKAG-EAA 423
           GH GG           PAG+     KS+G + ++ GQFA+A    S A  LLE AG E A
Sbjct: 434 GHPGGGQGAEN-----PAGL-----KSQGNELFRSGQFAEAAGKYSAAIALLEPAGSEIA 493

Query: 424 GTMEVL-SCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADD 483
             + +L S RA+CY + G     + DC + L+    ++  L++RA+ YE++E+Y     D
Sbjct: 494 DDLSILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQYGKAYVD 553

Query: 484 LRTVMKLDPSNRVARSTIHRLNKM 506
            +TV+++D   ++A  +++RL+++
Sbjct: 554 YKTVLQIDCGLQLANDSVNRLSRI 567

[Close]

BLAST of Spo11340.1 vs. ExPASy Swiss-Prot
Match: SPAG1_RAT (Sperm-associated antigen 1 OS=Rattus norvegicus GN=Spag1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.300e-10
Identity = 50/153 (32.68%), Postives = 83/153 (54.25%), Query Frame = 1


		  
Query: 357 GFESEYGGHDGG--STTEIEGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVL 416
           G E + G  + G  ST++   L    A  S    KS+G + ++ GQFA+A    S A   
Sbjct: 399 GAEQQEGQPETGTASTSDNHDLEERRAADSPGDLKSRGNELFRGGQFAEAAVQYSGAIAQ 458

Query: 417 LEKAG-EAAGTMEVL-SCRASCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESM 476
           LE  G E A  + +L S RA+CY + G  +  + DC + L+     V  L++RA+ YE++
Sbjct: 459 LEPTGSENADELSILYSNRAACYLKEGNCRGCIQDCDRALELQPFAVKPLLRRAMAYETL 518

Query: 477 EKYRLGADDLRTVMKLDPSNRVARSTIHRLNKM 506
           E+YR    D  TV+K+D   ++A  +++R+ ++
Sbjct: 519 EQYRSAYVDYITVLKIDCRIQLASDSVNRITRI 551

[Close]

BLAST of Spo11340.1 vs. ExPASy Swiss-Prot
Match: SPAG1_DANRE (Sperm-associated antigen 1A OS=Danio rerio GN=spag1a PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.100e-9
Identity = 54/180 (30.00%), Postives = 94/180 (52.22%), Query Frame = 1


		  
Query: 332 SGGSGDAPVSDHAAGGNQFSGGDNWGFESEYGGHDGGSTTEIEG----LPPPPAGVSAST 391
           +  S + P S  AA G+  +G      +   G    G +  ++     LPPP A +    
Sbjct: 76  AANSKEVPGSSPAANGSLPAGKSQ---DEPQGPGSAGESCNLDAPCGALPPPLARL---- 135

Query: 392 AKSKGLDNYKQGQFADAI-KWLSWAEVLLEKAGEAAGTMEVL-SCRASCYKEVGEYKKAV 451
            K++G   +K GQF DA+ K+    +  +E   ++   + VL S RA+C+ + G     +
Sbjct: 136 -KNQGNMLFKNGQFGDALEKYTQAIDGCIEAGIDSPEDLCVLYSNRAACFLKDGNSADCI 195

Query: 452 ADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKM 506
            DCT+ L+    ++  L++RA+ YES+E+YR    D +TV+++D S + A  ++HR+ KM
Sbjct: 196 QDCTRALELHPFSLKPLLRRAMAYESLERYRKAYVDYKTVLQIDISVQAAHDSVHRITKM 247

[Close]

BLAST of Spo11340.1 vs. ExPASy Swiss-Prot
Match: TOM34_MOUSE (Mitochondrial import receptor subunit TOM34 OS=Mus musculus GN=Tomm34 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 7.400e-9
Identity = 38/120 (31.67%), Postives = 67/120 (55.83%), Query Frame = 1


		  
Query: 385 ASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKKA 444
           A   K +G D  K+G    AI+   ++E LL  + E+A      S RA C+  + +YK+A
Sbjct: 193 AKALKEEGNDLVKKGNHKKAIE--KYSESLLCSSLESA----TYSNRALCHLVLKQYKEA 252

Query: 445 VADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNK 504
           V DCT+ L  DG+NV    +RA  Y++++ Y+    D+ ++++++P N  A+     +N+
Sbjct: 253 VKDCTEALKLDGKNVKAFYRRAQAYKALKDYKSSLSDISSLLQIEPRNGPAQKLRQEVNQ 306

[Close]

BLAST of Spo11340.1 vs. ExPASy Swiss-Prot
Match: TOC64_PEA (Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum GN=TOC64 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.100e-7
Identity = 39/122 (31.97%), Postives = 57/122 (46.72%), Query Frame = 1


		  
Query: 384 SASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKK 443
           SA  +K KG   YK  Q+  AI + + A  L              S RA  Y E+G Y +
Sbjct: 476 SAEISKEKGNQAYKDKQWQKAIGFYTEAIKL------CGNNATYYSNRAQAYLELGSYLQ 535

Query: 444 AVADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLN 503
           A  DCT  +  D +NV    +R    E +  Y+   DD +  + L+P+N+ A S+  RL 
Sbjct: 536 AEEDCTTAISFDKKNVKAYFRRGTAREMLGYYKEAIDDFKYALVLEPTNKRAASSAERLR 591

Query: 504 KM 506
           K+
Sbjct: 596 KL 591

[Close]

BLAST of Spo11340.1 vs. TAIR (Arabidopsis)
Match: AT3G16760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 398.3 bits (1022), Expect = 7.200e-111
Identity = 268/526 (50.95%), Postives = 343/526 (65.21%), Query Frame = 1


		  
Query: 1   MNSNYGKNG---TNNFDFDLGIRSNFPKSLNDQKNKSNSYSYMSSATSSLSQSKPATTTP 60
           MNSN+GK     TN+FDFDLG+ S+  + LN QK++++SYS      SS SQ +PA    
Sbjct: 1   MNSNFGKRSSGSTNSFDFDLGLGSSQGRPLNGQKSQTSSYS------SSNSQPRPA---- 60

Query: 61  SWQPGKPSWTHQPAPGNNGVTRSELG-GPASMVGDIFGKSWNSPKPATSGQSVNIGVVNK 120
            WQPGKPSWTHQPAP  + + RSE+G GP SMVGDI GK+W S     SG    IG+VNK
Sbjct: 61  -WQPGKPSWTHQPAPKQSTI-RSEIGSGPTSMVGDIHGKTWGS----ASGSGSGIGIVNK 120

Query: 121 NPNLFGDLVGSALGQNKSSSNVPLKSAAPV------KSSFSMGGVADSLPKTNNSNVGKN 180
           +P+LFGDLVGSA+GQ KSS NVPLK+A PV      KS +SMG + DSLPK+ NS   K 
Sbjct: 121 DPSLFGDLVGSAIGQGKSSRNVPLKNAPPVSASGSSKSPYSMGNLGDSLPKSGNSM--KT 180

Query: 181 GAGAGLGSSQSFASFGGATNGSSLYGNTGVNKSSSMGGGSMRSVAGGSGGGGIGTGMSSN 240
           G G G  S+ S  S G  ++G       G N  +++GG SM+++AGG+     G+G+ SN
Sbjct: 181 GGGMGYSSNPSGFSGGYTSSG-------GFN--ANLGGPSMKNMAGGNLN---GSGLPSN 240

Query: 241 KDPFGSLVDFSAKPMGGGSLNSSSKATASTSSEDLGFGDFQNASKSNTSTFPSGNGNSWG 300
            DPFGSLV F +K  G      S     + ++++  FG+FQ  S  N+           G
Sbjct: 241 SDPFGSLVGFGSKSSG------SKPGKVNNNAQNDTFGNFQGVSNLNS-----------G 300

Query: 301 SSSGAVPQMDSFAAFAPQKNPAPVQPSCGDSF-----DMFFSPSA-ASGGSGDAPV---- 360
            S+G   Q++ F  F   K+      S G SF     D    PS   S  + D P+    
Sbjct: 301 GSTGTTTQINDFGGFQASKSNT---FSSGGSFNASNVDFGVQPSGPQSSSANDDPLGMFS 360

Query: 361 SDHAAGGNQFSGGDNWGFESEYGGHDGGSTTEIEGLPPPPAGVSASTAKSKGLDNYKQGQ 420
           +   +        ++WGFES  GG   GSTTE++GLPPPP GVSA++AK+KG+DN +QGQ
Sbjct: 361 NSKPSAAPPTPQTEDWGFESFDGG--AGSTTELDGLPPPPPGVSATSAKNKGIDNQRQGQ 420

Query: 421 FADAIKWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGEYKKAVADCTKVLDQDGENVS 480
           +ADAIKWLSWA +L+++AG+ AG+ EVLS RASCYKEVGEYKKAVADCTKVLD D +NV+
Sbjct: 421 YADAIKWLSWAVILMDRAGDEAGSAEVLSTRASCYKEVGEYKKAVADCTKVLDHDKKNVT 474

Query: 481 VLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIHRLNKMA 507
           +LVQRALLYESMEKY+LGA+DLR V+K+DP NR+ARST+HRL KMA
Sbjct: 481 ILVQRALLYESMEKYKLGAEDLRMVLKIDPGNRIARSTVHRLTKMA 474

[Close]

BLAST of Spo11340.1 vs. TAIR (Arabidopsis)
Match: AT4G30480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 3.500e-9
Identity = 37/134 (27.61%), Postives = 71/134 (52.99%), Query Frame = 1


		  
Query: 374 EGLPPPPAGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKAGEAAGTMEVLSC-RA 433
           +G     A   A+ AK++G   +  G + +A+   ++A  L+++  E+     +    R 
Sbjct: 94  DGSNKEKALAEANEAKAEGNKLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRG 153

Query: 434 SCYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSN 493
            C+ ++G+ ++ + +CTK L+ +      LV+RA  +E +E +     DL+ +++LDPSN
Sbjct: 154 VCFLKLGKCEETIKECTKALELNPTYNKALVRRAEAHEKLEHFEDAVTDLKKILELDPSN 213

Query: 494 RVARSTIHRLNKMA 507
             AR  I RL  +A
Sbjct: 214 DQARKGIRRLEPLA 227

[Close]

BLAST of Spo11340.1 vs. TAIR (Arabidopsis)
Match: AT3G25230.2 (rotamase FKBP 1)

HSP 1 Score: 54.3 bits (129), Expect = 2.500e-7
Identity = 36/131 (27.48%), Postives = 68/131 (51.91%), Query Frame = 1


		  
Query: 384 SASTAKSKGLDNYKQGQFA-------DAIKWLSWAEVLLEKAGEAAGTMEVLSCR---AS 443
           +AS  K +G   +K G+++        A+K++ +     E+  + A  ++V +C    A+
Sbjct: 399 AASKKKEEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKV-ACNLNDAA 458

Query: 444 CYKEVGEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNR 503
           C  ++ +YK+A   CTKVL+ +  NV  L +RA  Y  +    L   D++  +++DP+NR
Sbjct: 459 CKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYMELSDLDLAEFDVKKALEIDPNNR 518

Query: 504 VARSTIHRLNK 505
             +    RL +
Sbjct: 519 EVKLEQKRLKE 528

[Close]

BLAST of Spo11340.1 vs. TAIR (Arabidopsis)
Match: AT1G56090.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 1.600e-6
Identity = 34/122 (27.87%), Postives = 67/122 (54.92%), Query Frame = 1


		  
Query: 381 AGVSASTAKSKGLDNYKQGQFADAIKWLSWAEVLLEKAGEAAGTMEVLSCRASCYKEVGE 440
           + V+AS    KG   Y+ G++ +A+ + + A   L  A      + + S RA+CY ++ +
Sbjct: 3   SAVTASGKVEKGHQLYRDGKYKEALLFYTEA---LTAAKAKPQKIALHSNRAACYLKLHD 62

Query: 441 YKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLDPSNRVARSTIH 500
           + KA  +CT VL+ D ++   L+ RA    ++++Y+    D+  +M+L+P + V ++   
Sbjct: 63  FIKAAEECTCVLELDQKHSGALMLRAQTLVTLKEYQSALFDVTRLMELNPDSEVYQNLEA 121

Query: 501 RL 503
           RL
Sbjct: 123 RL 121

[Close]

BLAST of Spo11340.1 vs. TAIR (Arabidopsis)
Match: AT5G20360.1 (Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 49.3 bits (116), Expect = 8.200e-6
Identity = 26/75 (34.67%), Postives = 42/75 (56.00%), Query Frame = 1


		  
Query: 432 ASCYKEV--GEYKKAVADCTKVLDQDGENVSVLVQRALLYESMEKYRLGADDLRTVMKLD 491
           ASCY ++  GE+ KA+ +C   L    ++   L++RA  YE++ K  L   D+  V KLD
Sbjct: 171 ASCYMQLEPGEFAKAIHECDLALSVTPDHNKALLKRARCYEALNKLDLALRDVCMVSKLD 230

Query: 492 PSNRVARSTIHRLNK 505
           P N +A   + +L +
Sbjct: 231 PKNPMASEIVEKLKR 245

The following BLAST results are available for this feature:

BLAST of Spo11340.1 vs. NCBI nr
BLAST of Spo11340.1 vs. UniProtKB/TrEMBL
BLAST of Spo11340.1 vs. ExPASy Swiss-Prot
BLAST of Spo11340.1 vs. TAIR (Arabidopsis)

BLAST of Spo11340.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902197759\|gb\|KNA13511.1\|	5.6e-275	99.4	hypothetical protein SOVF_1156...	[more]
gi\|731375020\|ref\|XP_010667124.1\|	4.9e-210	79.1	PREDICTED: uncharacterized tra...	[more]
gi\|870842092\|gb\|KMS95595.1\|	2.2e-194	79.5	hypothetical protein BVRB_0068...	[more]
gi\|661897115\|emb\|CDO98827.1\|	6.1e-136	58.5	unnamed protein product [Coffe...	[more]
gi\|565375527\|ref\|XP_006354280.1\|	5.3e-132	57.3	PREDICTED: uncharacterized tra...	[more]

BLAST of Spo11340.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R1W4_SPIOL	3.9e-275	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8DXL5_BETVU	1.5e-194	79.5	Uncharacterized protein OS=Bet...	[more]
A0A068TS12_COFCA	4.2e-136	58.5	Uncharacterized protein OS=Cof...	[more]
A0A0V0IKH5_SOLCH	5.7e-133	57.5	Putative P17/29C-like protein-...	[more]
A0A067JYI3_JATCU	7.0e-131	58.5	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo11340.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SPAG1_HUMAN	7.9e-11	33.3	Sperm-associated antigen 1 OS=...	[more]
SPAG1_RAT	2.3e-10	32.6	Sperm-associated antigen 1 OS=...	[more]
SPAG1_DANRE	1.1e-9	30.0	Sperm-associated antigen 1A OS...	[more]
TOM34_MOUSE	7.4e-9	31.6	Mitochondrial import receptor ...	[more]
TOC64_PEA	1.1e-7	31.9	Translocon at the outer membra...	[more]

BLAST of Spo11340.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G16760.1	7.2e-111	50.9	Tetratricopeptide repeat (TPR)...	[more]
AT4G30480.2	3.5e-9	27.6	Tetratricopeptide repeat (TPR)...	[more]
AT3G25230.2	2.5e-7	27.4	rotamase FKBP 1	[more]
AT1G56090.1	1.6e-6	27.8	Tetratricopeptide repeat (TPR)...	[more]
AT5G20360.1	8.2e-6	34.6	Octicosapeptide/Phox/Bem1p (PB...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 385..502 score: 2.1
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 386..500 score: 3.32
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 425..492 score: 12
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 385..418 score: 130.0coord: 459..492 score: 0.24coord: 425..458 score: 0
None	No IPR available	PANTHER	PTHR22904	TPR REPEAT CONTAINING PROTEIN	coord: 248..286 score: 2.4E-46coord: 306..505 score: 2.4
None	No IPR available	PANTHER	PTHR22904:SF169	RNA POLYMERASE II-ASSOCIATED PROTEIN 3	coord: 306..505 score: 2.4E-46coord: 248..286 score: 2.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding