Spo17520 (gene)

Overview
NameSpo17520
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 2726330 .. 2731288 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGAGGTCAGGGATTTCTTATCCTTGATTCCCGGTCAAAAACCAGAAGACCGACCTGATATTATCGCTCGAGTTTTCAAGATAAAGCTTGATGAACTGATGGTGGACCTCACCAAAAGAAATATTTGCGGCCGCACTAAAGCAGGTAAATATAATCCAATTTTTTACAAAAACATATATGTCCAATTAGAAACTAAACACTTTAAAATGTTCTACATATATGCATGCGCTCCGTTTGTGTTTGGGTTAATGTGGCATATGTTATTATATTATGTCTTATAAGTTAATAATATATTGTGCCTTCCAAAAATCAGTTTTCACTCAAAAATGTTATATATAGCATGCGCTCCATTACTTTTTTGGGTAGATGTCGCATATGTTATTATATTTTGTCTTATAAGTTCATAATATATTGCCCCTTACATAAATCAGTTTACACTACAAAATGTTCTATATATACATATATAGAAATAAATATATCATATATAGTGCCCTCAATCTTCGCCCTGCCATTAATATCTTCCGTTTGCGGATTAATTACCCCCCTTCGAAATAAATAACTTCTAAACCCCTGTCTCCTGTACACTTTGCTACCCAAATCATTTATTGGGGTTTAGGGATTTTTATTCTGCTTAAAGGTGCCTTCTGCAAAATGTGCGTTATTGATCGATTCTCGAAATGTCTGATCGTCTACTGCTTAATTCATAAGGTGAGTAGTCAGGTGTACTTTTATTTGCTCGCCTTCCTTATTTATGCATGTTTAAGGAAAGTGTTTGTGTGTACAGTGTACTATTATAGTTGGGTTTGTCACAAGTTTTTGTATCAATGTATCATACTATGCTATGATTGTGTGATGCAAAGTGGGAGTTATTTATTAAATTTTGGTTGCCTATTCACAATCTGTATGCACTTCAATTTGCAGTATACAATTCCATTTGTCTTAGTCATTCTTGAAATGCCCAGTCGCTGCAATCTAGGAACATTGTATATGGATGGAAGTTTGGGTCTAATTTAGGAAACAGGTGTAATGAGAACTCATGCACACCAATACTGTCTTGGGTTGATGTGGCATACGTTATTACCTTATGTCTTATCGGAATAAAAGTTTACAACACAAAAGTACCATTGCTATTCTAACAATCTGTACCATCTTGCAGCAATATACACAATCGAGTTCCAAAAACGAGGCCTCCCACATGTTCATATGTTGTTGTTTTTGCAAGAACCGGACAAACTACGGACTGCAGCGGACATCGATCGACTAATTTCAGCAGAATTACCAGACCCGGAAGAGGACCCAGTTGCATTCGAGGCGGTAGTCCAATACATGACTCATGGACCGTGTGGTACGTTGAACCCAAAATGTCCATGTATGCATGATGGGCGTTGTACAAAGTACTATCCTAAAGACTTCAACGACGACACAATCATTGGAGAAGACGGTTACCCACAATACAGAAGAAGAAACAATGGTCGGGTAGCACAAAAGAATGGCCACACAATTGATAATACCTTCATTGTGCCATACAATGTGGACTTGCTGGTGAAGTATCAAGCACACATCAACGTCGAAGTATGCAAGAAATACACATGTACCAAATACCTGTTCAAGTACATGAAAAAGGGTCCAGATATGGCACTAGCAACAGTTCAAGAAGTCACAGATAGTGGAATACCAGGAGGACAACAAGCCAATCCTGAACCCCCAAGAGACGAGATAAAATCGTACTTGCAATGCANCCAGGAGGACAACAAGCCAATCCTGAACCCCCAAGAGACGAGATAAAATCGTACTTGCAATGCAGATATGTATCTGCTGCAGAAGCATGCTGGAGAGTATTTGGCTTCCCAATACAATATAAATACCCCCCAGTTCAACGCTTAAGTTGTCACCTAGAGGAAGAACAAATAGTGATGTTTGAAGATCATGAGCCACTGGATCAAGTGCTTGAAAGAGTAGGACCAGCAAAGACTCCTCTCACCGGATGGATGGAAGCAAATAGGAAGTACCCANTGAAAGAGTAGGACCAGCAAAGACTCCTCTCACCGGATGGATGGAAGCAAATAGGAAGTACCCAGAAGCAAGAAAACTGACATACCACGATTTCCCAACTGAATGGGTATGGCAAAGCAAGGAAAGGAAATGGAAAGGAAGAGATGAAGGCTTCAAAATAGGGAGGATTTACTACGTCCACCCAGCATCAGGGGAGCTTCACTACTTACGTATGCTCCTTAATATAGTGACAGGATCAACAAGCTTTGCAGATATAAGAACAGTAAATGGCGTAGAATTTGCCACATTCAAGGAAGCTTGCAATGCTTTAGGGCTTCTAGAAGGAGATAGTGAATGGCATGAAGCTCTAAAGGCTGCGTCATCTTGGGCTCATGCCCCACAACTTAGAGAGTTGTTCGCCACAATCTTAATCTTCTGTGAAGTAACAAGTCCCAGTGACCTATGGGAGAAAAATTGGGAGCTACTATCAGATGATGTCCAATACCGGCAACGCAAGAGGTTTAATTCTCCAAACATTGTGCTAACAACAAACCAAGTGCAAAACTACGCATTATATGAGATAGAATTGATCCTTAACAGAAATAACAGGAGCCTCACGAACTATGGAAGTATGCCATTCCCGGACATGTCTTTGGTGCAACAAACATCAAACAGATTGATATTGGAAGAGCAAATGTTTGACATCGCAACTCTAGCAGACGAAGCATCTAATCTAGAAGCAGGCCTAAATCCAGAACAAAGCTCTGTGTACCATCAGATACTAGAAGTAATAGAAAATAGAATAGGGGGGGTATTCTTCATTTATGGTAGCGGAGGCACAGGGAAGACATATTTGTGGAGCACCCTAATATCAAGAATTAGATCTCAAGGTCATATTGTAATCGCAGTGGTATCATCTGGAATTGCAGCATTATTACTTCACTGTGGAAGGACGGCACATTCACGCTTCAGCATCCCAATACATTTAAATGAGAACTCATGTTGCAGGATACCGCAAGGCTCAAACTTGGCATTTCTGATCCAAAGAGCAAGGCTTATAATATGGGATGAAGCTCCCATGGTCCACAGGCATGCCTTTGAGGCAGTGGACCGCACTCTACGTGATATTATGCAGACAGTAAACCCAAGCGCTTCAGACAGGCCATTTGGAGGAAAGACGGTTGTATTAGGAGGCGATTTTAGACAAATCTTACCGGCGGTGCCACGAAAAGGAAGAGAAGACATTGTTGATGCATCGGTCAGTAGGTCTCCAACAATATGGCCTCATTGCATCATGTTTAAGCTGACTACAAACATGAGATTGCGGGGAAGCTCAACCACTGTTGGATTAGAACAAATGCAGGCTTTTAGCAAATGGGTCCTAGATGTGGGTGATGGAAAAATACCTACTACTGCCAAAAACGGGGAAGATGAGGGCAGTTGGATTCAAATACCAACTGACCTACTGGTAAAAGACCATGAAGATAACAAGGTAGCCCTTGTGGAAGAAATATATCCAGACCTTCTTCACAACTACAGAGACATCAAATACCTTGCTGAAAGGGCGATTTTAGCACCTAAAAACGAATATGTAGATGAAATAAACAACTACATTCTCTCGATGATTCCAGGAGTGGAAGGTGTATATAAAAGTGCTGATAGAGTAAGCCCCCTCACAAATAGAAGCTCAGTCGATGAAGATCTATACCCAACAGAGTTCCTCAACACACTGCAATTCCCCGGCATCCCAAATCATGAGATACGACTAAAGGTAGGTTGCCCAATAATCCTACTTAGAAACATCAACCAGGTTGAGGGATTATGCAATGGAACAAGGCTCATCATAACACGGTTGGAAGCAATTGTAATTGAAGCACAAGTGGTAACCGGGAAGAATGTAAGACGCAGAGTGTCCATTCCCTGGGTAGAGATGACACCGTCTAATCACGCACTGCCATTCACTATGAAGCGCAGACAATTCCCCGTCAAGGTATGCTTTGCAATGACAATCAACAAAAGCCAAGGTCAAACGTTCAACCGCGTAGGTGTGTATTTGCCAGAGTCCGTCTTCATCCATGGACAACTATATGTGGCTGTCTCTAGAGTCACTTCTCGATCTGGTCTCAGAATTTGTATAGGACGCCATGGAAACGACACGGAAAACTCTACAGAAACAAAGAATGTAGTGTACAGAGAGATTTTTGACGATGTATAAAAATAAAAATAAAGAAGAAAGTCCATTCTATCCACAAGTGTAACAAAACCAAACCAAAGGATGGGAACTTGCATAAATATGTAGTACGCCCTATTCTTCTAATACGTGTAATGTTTCTCTCGCATCTTTCAATAAAATGAATAATATGGTTACAAATCCACAGCTTTATTTATTTCATATGTCCTGCAATTCATTTCTAATCTGCTTATACGCTTACTTAACATGTCAAGAAAACAACTCCTAAACTAACATCTGATGCATTTTTCAGGAACAACAGGCCTGCAAGTAGAACAGAATAGAGTTACAGAATGGGGCTATGTATTCCTTTCATACTTCAGAGAAACCAAGGGCAATGTTGTCACTCGTGGGGGACAAAGCAGACTAAGAAGCAGAAACAAAAGTACGCAAATATTCAAGATGTGAATTAGAATTTAGAAAGTGAGTATAAAAATCAGATTACTCATTCCCCTATTTCATAGAACAGGTTTATGATGTTATGTGAAGTCTTTGCATATGACTCCATAAAGAAGGGACCATTATCTTAATTAAGAAGTTAAATGATCTAGAGGCTACATGTGCGGACTGCCTTAGTTAAAGTGCCCAAGTTCTTGTGGTAGCAGCATATACCTATCCATTCTTCAACTCAAAAGAATTTATGTTCATTATTTTACAGCTTTATATCTTATCTGTGAATCGTTGTACTTGCAGGAAGACTCATATGAAGGGAATGCTACGCAAAAAGCCTGA

mRNA sequence

ATGGCTAGAGGAACAACAGGCCTGCAAGTAGAACAGAATAGAGTTACAGAATGGGGCTATGTATTCCTTTCATACTTCAGAGAAACCAAGGGCAATGTTGTCACTCGTGGGGGACAAAGCAGACTAAGAAGCAGAAACAAAACTTTATATCTTATCTGTGAATCGTTGTACTTGCAGGAAGACTCATATGAAGGGAATGCTACGCAAAAAGCCTGA

Coding sequence (CDS)

ATGGCTAGAGGAACAACAGGCCTGCAAGTAGAACAGAATAGAGTTACAGAATGGGGCTATGTATTCCTTTCATACTTCAGAGAAACCAAGGGCAATGTTGTCACTCGTGGGGGACAAAGCAGACTAAGAAGCAGAAACAAAACTTTATATCTTATCTGTGAATCGTTGTACTTGCAGGAAGACTCATATGAAGGGAATGCTACGCAAAAAGCCTGA

Protein sequence

MARGTTGLQVEQNRVTEWGYVFLSYFRETKGNVVTRGGQSRLRSRNKTLYLICESLYLQEDSYEGNATQKA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17520.1Spo17520.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo17520.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17520.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17520.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0000723 telomere maintenance
biological_process GO:0009987 cellular process
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0009536 plastid
cellular_component GO:0005657 replication fork
cellular_component GO:0016020 membrane
molecular_function GO:0003678 DNA helicase activity
RNA-Seq Expression