Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAGATTTGCTGCATTGGGGCTGGTTATGTAGGAGGCCCTACTATGGCTGTTATAGCACTCAAGTGCCCAAAGATTGAAGTTGTAGTGGTTGATATATCTGTGTCTCGGATCACTGCATGGAACAGCGAGCAGCTTCCAATCTATGAGCCGGGTCTAGATGATGTGGTTAAGGAATGCCGTGGAAGGAACCTTTTCTTCAGCACTGATGTAGAAAAGCATGTTGCTGAGGCTGATATTGTTTTTGTCTCTGTGAATACCCCTACCAAAACCACAGGTCTTGGAGCAGGCAAAGCTGCTGATTTGACCTACTGGGAGAGTGCTGCCCGTATGATTGCTGATGTTTCAAAGTCTGACAAAATCGTTGTTGAGAAATCAACTGTGCCAGTGAAAACTGCTGAGGCAATCGAAAAGATTCTGACGCACAACAGCAAGGGAATCAACTACCAGATCCTTTCAAATCCGGAGTTCCTTGCTGAAGGTACTGCTATTCAGGACCTTTTTCACCCTGACAGGGTTCTCATCGGTGGCCGGGAAACCCCAGCAGGCCTCAAGGCAGTCCAAGCATTGAAGGATGTGTATGCTCAATGGGTTCCTGATGAACGGATCTTAACCACCAATCTTTGGTCTGCTGAGCTCTCAAAGCTTGCTGCCAACGCCTTCTTAGCACAGAGGATTTCATCTGTCAATGCAATGTCAGCTCTTTGTGAGGCTACTGGAGCAGATGTTACCCAAGTCGCATATGCTGTTGGTAAGGACAGTAGGATTGGGCAAAAGTTTTTGAACGCTAGTGTTGGTTTTGGAGGGTCTTGCTTCCAGAAAGACATTCTGAACTTGGTTTACATTTGTGAGTGCAACGGTCTCCCTGAGGTGGCCGAGTATTGGAAACAGGTAATCAAGGTGAATGATTATCAGAAGAATCGTTTTGTGAATAGGGTTGTGGCCTCCATGTTCAACACTGTATCGAACAAGAAGATTGCTGTTCTTGGATTTGCATTCAAAAAGGATACAGGGGATACTAGGGAGACACCCGCCATAGATGTGTGCAAGGGTTTGTTGGGAGACAAGGCAAGGTTGAGCATCTACGATCCACAAGTCACTGAGGATCAGATTCAGCGAGATCTCACCATGAACAAGTTTGACTGGGACCACCCAATTCACCTCCAGCCCACAAGTCCCACAACTGTTAAGCAAGTGAGTGTTGTTTGGGACGCTTATGAGGCCACCAAAGATGCTCATGCTGTGTGTATTCTGACTGAGTGGGATGAATTTAAGAAACTTGATTACAAAAGGATTTTTGACAACATGCAGAAGCCAGCTTTTGTGTTTGATGGAAGGAACATTGTGAATGCAGATGAGCTGAGGCAGATTGGGTTCATTGTGTACTCAATTGGTAAACCTTTGGATTCATGGCTCAAGGACATGCCTGCTGTGGCTTAA ATGGTGAAGATTTGCTGCATTGGGGCTGGTTATGTAGGAGGCCCTACTATGGCTGTTATAGCACTCAAGTGCCCAAAGATTGAAGTTGTAGTGGTTGATATATCTGTGTCTCGGATCACTGCATGGAACAGCGAGCAGCTTCCAATCTATGAGCCGGGTCTAGATGATGTGGTTAAGGAATGCCGTGGAAGGAACCTTTTCTTCAGCACTGATGTAGAAAAGCATGTTGCTGAGGCTGATATTGTTTTTGTCTCTGTGAATACCCCTACCAAAACCACAGGTCTTGGAGCAGGCAAAGCTGCTGATTTGACCTACTGGGAGAGTGCTGCCCGTATGATTGCTGATGTTTCAAAGTCTGACAAAATCGTTGTTGAGAAATCAACTGTGCCAGTGAAAACTGCTGAGGCAATCGAAAAGATTCTGACGCACAACAGCAAGGGAATCAACTACCAGATCCTTTCAAATCCGGAGTTCCTTGCTGAAGGTACTGCTATTCAGGACCTTTTTCACCCTGACAGGGTTCTCATCGGTGGCCGGGAAACCCCAGCAGGCCTCAAGGCAGTCCAAGCATTGAAGGATGTGTATGCTCAATGGGTTCCTGATGAACGGATCTTAACCACCAATCTTTGGTCTGCTGAGCTCTCAAAGCTTGCTGCCAACGCCTTCTTAGCACAGAGGATTTCATCTGTCAATGCAATGTCAGCTCTTTGTGAGGCTACTGGAGCAGATGTTACCCAAGTCGCATATGCTGTTGGTAAGGACAGTAGGATTGGGCAAAAGTTTTTGAACGCTAGTGTTGGTTTTGGAGGGTCTTGCTTCCAGAAAGACATTCTGAACTTGGTTTACATTTGTGAGTGCAACGGTCTCCCTGAGGTGGCCGAGTATTGGAAACAGGTAATCAAGGTGAATGATTATCAGAAGAATCGTTTTGTGAATAGGGTTGTGGCCTCCATGTTCAACACTGTATCGAACAAGAAGATTGCTGTTCTTGGATTTGCATTCAAAAAGGATACAGGGGATACTAGGGAGACACCCGCCATAGATGTGTGCAAGGGTTTGTTGGGAGACAAGGCAAGGTTGAGCATCTACGATCCACAAGTCACTGAGGATCAGATTCAGCGAGATCTCACCATGAACAAGTTTGACTGGGACCACCCAATTCACCTCCAGCCCACAAGTCCCACAACTGTTAAGCAAGTGAGTGTTGTTTGGGACGCTTATGAGGCCACCAAAGATGCTCATGCTGTGTGTATTCTGACTGAGTGGGATGAATTTAAGAAACTTGATTACAAAAGGATTTTTGACAACATGCAGAAGCCAGCTTTTGTGTTTGATGGAAGGAACATTGTGAATGCAGATGAGCTGAGGCAGATTGGGTTCATTGTGTACTCAATTGGTAAACCTTTGGATTCATGGCTCAAGGACATGCCTGCTGTGGCTTAA ATGGTGAAGATTTGCTGCATTGGGGCTGGTTATGTAGGAGGCCCTACTATGGCTGTTATAGCACTCAAGTGCCCAAAGATTGAAGTTGTAGTGGTTGATATATCTGTGTCTCGGATCACTGCATGGAACAGCGAGCAGCTTCCAATCTATGAGCCGGGTCTAGATGATGTGGTTAAGGAATGCCGTGGAAGGAACCTTTTCTTCAGCACTGATGTAGAAAAGCATGTTGCTGAGGCTGATATTGTTTTTGTCTCTGTGAATACCCCTACCAAAACCACAGGTCTTGGAGCAGGCAAAGCTGCTGATTTGACCTACTGGGAGAGTGCTGCCCGTATGATTGCTGATGTTTCAAAGTCTGACAAAATCGTTGTTGAGAAATCAACTGTGCCAGTGAAAACTGCTGAGGCAATCGAAAAGATTCTGACGCACAACAGCAAGGGAATCAACTACCAGATCCTTTCAAATCCGGAGTTCCTTGCTGAAGGTACTGCTATTCAGGACCTTTTTCACCCTGACAGGGTTCTCATCGGTGGCCGGGAAACCCCAGCAGGCCTCAAGGCAGTCCAAGCATTGAAGGATGTGTATGCTCAATGGGTTCCTGATGAACGGATCTTAACCACCAATCTTTGGTCTGCTGAGCTCTCAAAGCTTGCTGCCAACGCCTTCTTAGCACAGAGGATTTCATCTGTCAATGCAATGTCAGCTCTTTGTGAGGCTACTGGAGCAGATGTTACCCAAGTCGCATATGCTGTTGGTAAGGACAGTAGGATTGGGCAAAAGTTTTTGAACGCTAGTGTTGGTTTTGGAGGGTCTTGCTTCCAGAAAGACATTCTGAACTTGGTTTACATTTGTGAGTGCAACGGTCTCCCTGAGGTGGCCGAGTATTGGAAACAGGTAATCAAGGTGAATGATTATCAGAAGAATCGTTTTGTGAATAGGGTTGTGGCCTCCATGTTCAACACTGTATCGAACAAGAAGATTGCTGTTCTTGGATTTGCATTCAAAAAGGATACAGGGGATACTAGGGAGACACCCGCCATAGATGTGTGCAAGGGTTTGTTGGGAGACAAGGCAAGGTTGAGCATCTACGATCCACAAGTCACTGAGGATCAGATTCAGCGAGATCTCACCATGAACAAGTTTGACTGGGACCACCCAATTCACCTCCAGCCCACAAGTCCCACAACTGTTAAGCAAGTGAGTGTTGTTTGGGACGCTTATGAGGCCACCAAAGATGCTCATGCTGTGTGTATTCTGACTGAGTGGGATGAATTTAAGAAACTTGATTACAAAAGGATTTTTGACAACATGCAGAAGCCAGCTTTTGTGTTTGATGGAAGGAACATTGTGAATGCAGATGAGCTGAGGCAGATTGGGTTCATTGTGTACTCAATTGGTAAACCTTTGGATTCATGGCTCAAGGACATGCCTGCTGTGGCTTAA MVKICCIGAGYVGGPTMAVIALKCPKIEVVVVDISVSRITAWNSEQLPIYEPGLDDVVKECRGRNLFFSTDVEKHVAEADIVFVSVNTPTKTTGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIQDLFHPDRVLIGGRETPAGLKAVQALKDVYAQWVPDERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVTQVAYAVGKDSRIGQKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKVNDYQKNRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPIHLQPTSPTTVKQVSVVWDAYEATKDAHAVCILTEWDEFKKLDYKRIFDNMQKPAFVFDGRNIVNADELRQIGFIVYSIGKPLDSWLKDMPAVA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26067.1 vs. NCBI nr
Match: gi|902151222|gb|KNA05493.1| (hypothetical protein SOVF_189830 [Spinacia oleracea]) HSP 1 Score: 964.1 bits (2491), Expect = 8.800e-278 Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 1
BLAST of Spo26067.1 vs. NCBI nr
Match: gi|731354968|ref|XP_010688887.1| (PREDICTED: UDP-glucose 6-dehydrogenase 1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 926.8 bits (2394), Expect = 1.600e-266 Identity = 453/480 (94.38%), Postives = 471/480 (98.12%), Query Frame = 1
BLAST of Spo26067.1 vs. NCBI nr
Match: gi|823185715|ref|XP_012489630.1| (PREDICTED: UDP-glucose 6-dehydrogenase 1 [Gossypium raimondii]) HSP 1 Score: 907.9 bits (2345), Expect = 7.500e-261 Identity = 445/479 (92.90%), Postives = 463/479 (96.66%), Query Frame = 1
BLAST of Spo26067.1 vs. NCBI nr
Match: gi|211906438|gb|ACJ11712.1| (UDP-D-glucose dehydrogenase [Gossypium hirsutum]) HSP 1 Score: 907.1 bits (2343), Expect = 1.300e-260 Identity = 445/479 (92.90%), Postives = 463/479 (96.66%), Query Frame = 1
BLAST of Spo26067.1 vs. NCBI nr
Match: gi|225452968|ref|XP_002284346.1| (PREDICTED: UDP-glucose 6-dehydrogenase 1 [Vitis vinifera]) HSP 1 Score: 905.6 bits (2339), Expect = 3.700e-260 Identity = 444/480 (92.50%), Postives = 463/480 (96.46%), Query Frame = 1
BLAST of Spo26067.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFN6_SPIOL (UDP-glucose 6-dehydrogenase OS=Spinacia oleracea GN=SOVF_189830 PE=3 SV=1) HSP 1 Score: 964.1 bits (2491), Expect = 6.100e-278 Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 1
BLAST of Spo26067.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EHH7_BETVU (UDP-glucose 6-dehydrogenase OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g204050 PE=3 SV=1) HSP 1 Score: 926.8 bits (2394), Expect = 1.100e-266 Identity = 453/480 (94.38%), Postives = 471/480 (98.12%), Query Frame = 1
BLAST of Spo26067.1 vs. UniProtKB/TrEMBL
Match: A0A0B0P581_GOSAR (UDP-glucose 6-dehydrogenase OS=Gossypium arboreum GN=F383_01053 PE=3 SV=1) HSP 1 Score: 907.9 bits (2345), Expect = 5.200e-261 Identity = 445/479 (92.90%), Postives = 463/479 (96.66%), Query Frame = 1
BLAST of Spo26067.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S9A2_GOSRA (UDP-glucose 6-dehydrogenase OS=Gossypium raimondii GN=B456_007G081800 PE=3 SV=1) HSP 1 Score: 907.9 bits (2345), Expect = 5.200e-261 Identity = 445/479 (92.90%), Postives = 463/479 (96.66%), Query Frame = 1
BLAST of Spo26067.1 vs. UniProtKB/TrEMBL
Match: D2D2Z2_GOSHI (UDP-glucose 6-dehydrogenase OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 907.1 bits (2343), Expect = 8.900e-261 Identity = 445/479 (92.90%), Postives = 463/479 (96.66%), Query Frame = 1
BLAST of Spo26067.1 vs. ExPASy Swiss-Prot
Match: UGDH1_SOYBN (UDP-glucose 6-dehydrogenase 1 OS=Glycine max GN=UGD1 PE=2 SV=1) HSP 1 Score: 895.2 bits (2312), Expect = 3.100e-259 Identity = 439/480 (91.46%), Postives = 462/480 (96.25%), Query Frame = 1
BLAST of Spo26067.1 vs. ExPASy Swiss-Prot
Match: UGDH3_ARATH (UDP-glucose 6-dehydrogenase 3 OS=Arabidopsis thaliana GN=UGD3 PE=1 SV=1) HSP 1 Score: 888.6 bits (2295), Expect = 2.900e-257 Identity = 432/480 (90.00%), Postives = 460/480 (95.83%), Query Frame = 1
BLAST of Spo26067.1 vs. ExPASy Swiss-Prot
Match: UGDH4_ORYSJ (UDP-glucose 6-dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=UGD4 PE=2 SV=1) HSP 1 Score: 885.2 bits (2286), Expect = 3.300e-256 Identity = 433/480 (90.21%), Postives = 460/480 (95.83%), Query Frame = 1
BLAST of Spo26067.1 vs. ExPASy Swiss-Prot
Match: UGDH5_ORYSJ (UDP-glucose 6-dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=UGD5 PE=2 SV=1) HSP 1 Score: 882.9 bits (2280), Expect = 1.600e-255 Identity = 432/480 (90.00%), Postives = 459/480 (95.62%), Query Frame = 1
BLAST of Spo26067.1 vs. ExPASy Swiss-Prot
Match: UGDH3_ORYSJ (UDP-glucose 6-dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=UGD3 PE=2 SV=1) HSP 1 Score: 881.7 bits (2277), Expect = 3.600e-255 Identity = 432/480 (90.00%), Postives = 457/480 (95.21%), Query Frame = 1
BLAST of Spo26067.1 vs. TAIR (Arabidopsis)
Match: AT5G15490.1 (UDP-glucose 6-dehydrogenase family protein) HSP 1 Score: 888.6 bits (2295), Expect = 1.700e-258 Identity = 432/480 (90.00%), Postives = 460/480 (95.83%), Query Frame = 1
BLAST of Spo26067.1 vs. TAIR (Arabidopsis)
Match: AT5G39320.1 (UDP-glucose 6-dehydrogenase family protein) HSP 1 Score: 881.3 bits (2276), Expect = 2.600e-256 Identity = 425/478 (88.91%), Postives = 456/478 (95.40%), Query Frame = 1
BLAST of Spo26067.1 vs. TAIR (Arabidopsis)
Match: AT3G29360.1 (UDP-glucose 6-dehydrogenase family protein) HSP 1 Score: 879.0 bits (2270), Expect = 1.300e-255 Identity = 428/480 (89.17%), Postives = 456/480 (95.00%), Query Frame = 1
BLAST of Spo26067.1 vs. TAIR (Arabidopsis)
Match: AT1G26570.1 (UDP-glucose dehydrogenase 1) HSP 1 Score: 820.5 bits (2118), Expect = 5.500e-238 Identity = 402/481 (83.58%), Postives = 445/481 (92.52%), Query Frame = 1
BLAST of Spo26067.1 vs. TAIR (Arabidopsis)
Match: AT3G01010.1 (UDP-glucose/GDP-mannose dehydrogenase family protein) HSP 1 Score: 281.6 bits (719), Expect = 9.300e-76 Identity = 133/163 (81.60%), Postives = 147/163 (90.18%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26067.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26067.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26067.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26067.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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