Spo17100 (gene)

Overview
NameSpo17100
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 9216592 .. 9218490 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGACAAAGTGATGCATCATAAGCTGAAACTACAATACATAGAGGTAAATTCTTTACACATTTCATTCTTGGACCCTTAGGTGACAAATTTTCCTTTTCATGATATTTAAAAATATATTGTAATGATTGCTAGGAAAATTAAAGTTTAGAGATTTTTCTATTGTCGCAAAACAGGTATGGCTGTTAGCTGTTCATGCTCAACAAGATGTTCTGTTGGTTCATTTATTTTGTTTTGAGAATATCCTATGGAGGAGGGACATCTGATCCATGAACATCTTATTTTCTGCACCTCAAATCAAATAAATAGAACGTCTTTTGTAAAATAGATTAATATTCCATTTTAATCTTCTTACAAGTATTTGGTCTGCTTCAGTATTTTACTACAACTGTGTTAAGCATCTGACAGCTTAAATTGCTCTCATTATGCAATATCCTTGGAACTGAATTCATGCATCCTGTTTAATTTCACCGGCATCAAATCAAAATTTGTCATGTCATGTCTTGCAGAGACATTGTAGCTTATACATCCGTCTTGAGTGCAGTCTGCTTCCATAGGAGGCACTAGGCAGTTGTTTGTAAACTGTAGCCACTTTGGTCATTACCATTGTTCTCTTTCTTTTTTCAGAAGCTTTGCTTCAGAAAATGGTGTAAAGATATTGTTATGCATCAGACAGTCTTAATTTCATTTTCATGCTTGTGCATTGTGATCCCTTAAAATTAGAAATTCTGATGAGGTTAATCTGTTATTGGAAGTTTGGAACTACCTCCTAATAAAAGTATACATTTCCATAGGAGGCATCTGTTATCTGTAAGTAAAATAAACTAGCCATGTAAACTTAGTGTATGACGAAAGAGTAGCTCTTTACCAGAAAGAAAGAAATAAACAGTCCGAAGCCTCCGAGCACTGTCTATAACATAATATCTGATATCTGTACCGACGTACCCGAGTCTGACTAACATAGTATACGACTGTATTTCAATGTGTCCTTACCAGGAAACAAAGCAATACACCCACCTGCCCTGCCCTGCCCTGTCCTGTCCTATCCTGTCCTGTCCAAATTTCTTTGTTTGCTCTTGTCCCTTTTTGTATAAATCTTTATGGTGCATAGAAGCACCAGCTAAATTTTTTTCTGTAAACCATTTGTAATGCGCATTTGACTCTTTATAAATCTAGAAACAGAGCCCTCTCTTATAGGCTCTATGCTTCATGCAAATTCTATGTTTACTAGATATGTAACATACTTGCACTCAGCCAATCTGGTATTGCAGGGAAAAGACAAGGACAAAGTGGATGATCTGAACATAAGGGTTAAAAGATGGCACCAGCCAGCCATGTATTATCTAAAGCTCAACAAGGATGGACCTTGGGAACGTATTAGCAAGGGTGGTGGTGTTGGCATTATTACTTACAGTATTAAAAAGAATGACGAAACGTGATACGTTATTTTTTTCAATCAGATTCAATGCTGTTTCTCCTTCAGTCCTGCTGCAGGTGAGTTAATATCTGTCAGAGATTCAGGGAGGGGACTGATTCAGGGGTAATGATTTCCTTATGCTTATCAATCGCCCTGATCGATTTAAGCACAGGACCTCAAATAGAAAGCTGATGCTGAAGCTCCAAAAGACATGTTGAGCAAATCTAAGGAGCATTAGTATCATAATCTGGAAGCAAGAAGACCCAAGATTTAATTATTTGATTGGTCTTTTGAACTATAGGGCATGGCTTATTGTACAGGTTAAGGTATTTGGTACATTTAATTAGCATTGTATCATGAGCTATTTAATGTTGTATTATTGTATACTAGGAATCAGGTCATAGTTTGTATTAGAGTTTATTGTATACTAGGAATAAGATCATGTTACTATTGTAATTTGTAACACTCGTTTCGACGGAG

mRNA sequence

ATGATAGACAAAGTGATGCATCATAAGCTGAAACTACAATACATAGAGGGAAAAGACAAGGACAAAGTGGATGATCTGAACATAAGGGTTAAAAGATGGCACCAGCCAGCCATGTATTATCTAAAGCTCAACAAGGATGGACCTTGGGAACGTATTAGCAAGGGTGGTGGTGTTGGCATTATTACTTACAGTATTAAAAAGAATGACGAAACGTGATACGTTATTTTTTTCAATCAGATTCAATGCTGTTTCTCCTTCAGTCCTGCTGCAGGTGAGTTAATATCTGTCAGAGATTCAGGGAGGGGACTGATTCAGGGGTAATGATTTCCTTATGCTTATCAATCGCCCTGATCGATTTAAGCACAGGACCTCAAATAGAAAGCTGATGCTGAAGCTCCAAAAGACATGTTGAGCAAATCTAAGGAGCATTAGTATCATAATCTGGAAGCAAGAAGACCCAAGATTTAATTATTTGATTGGTCTTTTGAACTATAGGGCATGGCTTATTGTACAGGTTAAGGTATTTGGTACATTTAATTAGCATTGTATCATGAGCTATTTAATGTTGTATTATTGTATACTAGGAATCAGGTCATAGTTTGTATTAGAGTTTATTGTATACTAGGAATAAGATCATGTTACTATTGTAATTTGTAACACTCGTTTCGACGGAG

Coding sequence (CDS)

ATGATAGACAAAGTGATGCATCATAAGCTGAAACTACAATACATAGAGGGAAAAGACAAGGACAAAGTGGATGATCTGAACATAAGGGTTAAAAGATGGCACCAGCCAGCCATGTATTATCTAAAGCTCAACAAGGATGGACCTTGGGAACGTATTAGCAAGGGTGGTGGTGTTGGCATTATTACTTACAGTATTAAAAAGAATGACGAAACGTGA

Protein sequence

MIDKVMHHKLKLQYIEGKDKDKVDDLNIRVKRWHQPAMYYLKLNKDGPWERISKGGGVGIITYSIKKNDET
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17100.1Spo17100.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo17100.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17100.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17100.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17100.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo165330.72Barchart | Table
Spo138250.69Barchart | Table
Spo138260.69Barchart | Table
Spo263970.69Barchart | Table
Spo006580.66Barchart | Table