Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTACGGGGATATTCTTGTTTTGCAGGTTGTAAGAAGATCGTGCCAACGCATACCTGATACCTCCGTGGAAAGGGTGACACGTCAGCACCAACAAAGTTCCCACACCATTTGGCGCCGTCTGTGGGGAGGTACAGTATCATGGCAGACCTGAAATCTGAAGGTGAGAGACATGAGGGCGACTCAAGGGAAAGGTGTCCGAGCGAAAGGAGCTCCTCGCGAACTCGTTCTCACAAAGATCTTCAGCCTACTGCTAAGGGCGCAACATTAACCATAAGACGAGTAACCACGACACCTCCCAACGCAGTAGCTAGCCGACCTGCTTCAACCAGATTACTACAACAAATGCTACATAGTTAATGTTGCGCCCTTAACAGTAAGCTGATTACCAATATTATATTATTTCTCACACTTACCTAATAACCCACCTACACCCCTACTCCCTACAACAAATCATTTAAAAATTTACGCCCACATTCACCACTCTCCATCACTTACACATTTTTCAATAACAATCAAACGGTGCAAGTATTAAGGGACGGAGGGAGTAGCTGTTAATTGAAATACACTTCCTCAGTACGGAGTATTTGGGGATTTGATTTGGTCTTTTGCTAGTCGTCGCCCGCCGTAGACCGTGGCCAGTGGGCACTTGTTGGGAGTGCGAGATTCTCTCTTTCTGTAATCGCGTTTTGCTGATACCCTTTCCTTATTCAACCTCTGCAACTTCTTCTGGCCGCCCCTATCCTTCAGTATGGTACTCGCTCTTCTCTTTCTCTCTCCTCACCTCCATTTTCATAACTTTCACTGCTTGTTTTTGTTGTAATGATAATTGAGCTCAATTTTTTTCATTTTTTGAACCAACAACAAGAAAACGTTATTGTTTATTTGATTTTTGTTGTTATGAATTCTAAAGCTAGGGTTTTAGCAAGAACTTGAGCTTAGTTGTGACAACAAAACGAGACTCTGTGTTTGCTTGGAATTTTGATAGATGAATACGAAGTTGAGGTTTGGGGATAATTTTTTTGATGATTCTTTTGGTGTTTAGAGTTGTCTGTGAAGTGGAAATACATTTATCATGAGGTGATAATGAAAAATTTCTGGAACTTGTTAATTTTTGCAATTGATTTGGGAATTAGGGTTTTGACTTGAAGTTCAGTTCTTGTTTGTACTTCTGTGGTTGGGTGGATTCCAGTGTAATCAGAATCAAAGTAGTGTAATGATGTGCTTGTATATGTTGTACGGTATATTCATAAAATTCAGTTGGATTTATTTATTTATTTAGGAGGTGGGCCGTCGGAGGGGGGGAGGGGGATTGACATAAATTTTGTACTCGTATATGGTGATATTCTAGTATATGAAGTTGTTGCAATTGAGGTTTTATTTTGCTTGGTGAAGGGTTTGGATTTTCTCATAAATTTTGAGGATTGTTTCAAAAATCTTTAAGGAATTGTGGTCGACCTTCTTGTCCTATTTTTCTAGTTGAAGCCTTGGTATAAAGGATGTAGTATTAGAATTAGCTTATTTGGATCATTAGACAGTATGGAAGACTCATTCACACCATAGCAGACATTGAACAGGCTTTGTAGAATTGATGTTACTCGAGTTTTTTCGTAAGTGTTTAAAACTCAATGAGTTGGAAACGGTCACAAATCACAATGAGTCTTCTCCATATGTTAGATCATTACGAGATTGACAGGTTTGCTATTGTCAAATCAAATGCATTGAGTTTAAGTGGAGTGTTTTTTTTGTTTTGTTTTGTTTTGTTCTTTGAGTTTAAATGGAGTTTTTAGTTTTCCTTTCATTGAATGAGCTGATAACTAGTGGAGTAAGTGATTGATTCTAATGTCTGATTTCAATGAAATTAAGATGACGGATAATTGGCTGGCTTTACTTCTGTGATTTTTTTTTTGAAAAAACACTCTGTAAATGGTGCTATGCTACTTTAGATCTCTTCATATGGGATGCACTCTATGAACTACTGTTTAGTTCAGCTATTTGATCCTGCCACTGATGTGTACTCTACTTACTTATTTGAGCATAAGCTGATCTCTAGAATCCCACTGTATTGCAAAAGACCCTTTAGTAATGAAATTGCTTACCATGTTAGATATACACCTATGCCTTTTTCCACCGCCAAGAAAAGTGAGTCAGTAAATTTTGTTTATACAGAGTATGATCTTGGTTATGCGTTTTACTATGTTACTAGGTCCCTTACCAGAAATATACTCTCGTGGCTTTAGTAGTTCTGTTGAAATTGTGAGTCATTGAACCACCTGTCCAAATTGGTTAGTGCATGAGTCCTGAAAGGCAGAACTGCAGAAATATACTCAACTTTATAATGGATTAGTCGAATGGTTGTACACTTATTTTCTGAAGCTAAGTCGAACAATTAGACCTAAAGTTTTTTGCAAATGATGGTCAAGACAGGCAATGGGTTGTGAAAAGTTAAAATTGTAATTCATTATCCAATCAATCTTATATTCTGCTCCTCTTTATACTGAAGTGCATACTTGAGTAAGGAAATTGATATTCTGTTGTAGGTTTCTCTTAGTTAAAAATGCGTATCCTAGTTGTAGGATTATCTTGAAATCAGTGACTGAATGTGCATGATCAAATTCTGGTACTTCAGCACATAGACATGATTGTCATGAACCTAGATGACACTCTAGGTCAATGTTTGAGCATACTGGAAGCATTTATATAGGAATATCCTGCAAGTGATTTGTAATCGTCTGTGATATGAAATCTTTGGTTTCAAGATCCAAAGTATGGAAGTAAATCATCATGCATTTTTTTTAAAGGTATGAAAAATGGACAACACATGCTGATCTTAAGTTAAATATTGTGTTGCAGCTACAACTGTGTAAGATAATTTTCTTTCTGTTTATTAGTAAAATTATATTCAAGCATATGATAAATGAAATAATTATCAACAAGCAAGATGTATTGTGGGCTATCTGATTTTCGCAGCAATGAATTATGTTAACAGCAATGAATTATGAATTATTGTGTGAAGATTTTTTTAACTGTAAATATGACTAGAAAATCTGTGTGTGTTTTTGCTTTGGAGTACCAGTTCGTTACTTCGACTGCATTTGGTATTCATTTGTCTCTCTTGTTCAGTTGGTCCCTACTTTGAGCCTTATCAATCCTTAATGCTTTGGGGTGCTTACTGGAGCCATTTTTCAATTTTACAGGATAATAAGCACACAATTATCCTAATGCAGACATCACATAACAGATCATCTCGAACATTTATGGATTATGAGTCGATAAGCCAAGCAATGGATGGTAGGTTGTTATTTTTGGTTTATTATACAAACTTTAGTACGGGAGTTTGAACTTTTTCATATGAGCTGTTTCATTATTTGGTAAAAGAAGCTTTACTGGTTGAATGAGGATGAAACCTAAATAAAGGAACCATGCTTACAAGACTTACAATCTTGTATTCATCTATGTCATGTGGGCAAGGTTTGTAAAAGATCCACCTTACCCTAATCAATTTCAACCAGTAGCGTCTTTTAGACGAACTAAATAATATTAAAAAGATCAATAGTAATTACTAAAGCTGGTTTACTCTATCACTACTTATTTCTGATTTTTTTTTCGATGCCTACTTGTGGTATTTTCTTGGGGATAAGTAAATGAAATATGAGTGCAGTACACTTTTTAATTAATTTATTCCTAAGTTTGTTTGGAAGTCAATCAGGGGCCTAGAAAAAACAGAACATGCTAATTGTACTGAGGAAGCCACAAAGGAATAGAGCACAGAACACCTAGTAAAACCAAAGGGGGAAACCTGAAACTTGATCAGGATTGAAAGGGGCAGTCACTTTCTAGAATGCGTCTCACCCCGCCACTGACATCATGAGCAAAGCAAGTGTTTTGAGCTTCTGAACAAAAGCATAAGCTAAACTGAAAAGTTCACACAACAGCAGATCCAACTCCAATAGCCTCTGTTGACTGTAGCATCTTAGTCTACCTGCTGAATGACTTGCCTGAGGCAGAAATCTTTTTTGTTTTGTTTACTTGTGCATGTTTCACATGCAGGTATCTGTGCATTGTATGAAAAGAAGCTGAAGGAGATAAATCCAACCCTCAGAAACATCAGTTATGACATTGGTGACTTGTACAACTTCGTTGATGGGCTTGCTGATTTGAGTGCATTAGTGTACGTCTCTCATCCTAGCTGTATTTATTTGGATGTATGTTACCATATATTTTATTTCAAATAATTCTCAATGATCAGAAGATTAGCTATTCTGTTAAAGTTATTTTAATCTGTCATATACTCTGTAGTTGAATGTTATTTTGCAACTACAGCTATCTTTTATTTGTCTTTCATCGTAAGGATTTTTGATACTTGATTTTAACATGTCTTATTTTCTGAATTATTTAGTTGATCAATTGCCAAATTTGTAGCATATCTTGGTGTTTATTGTATTTTAATTCTGTTCTGTTAATGATTCTAATTTTCTCCCGGTTGCTTGATTGCACTGATATTTGTTGTCTTTGTTGTTTGTGTAGTTTTGATCATTCTATTCAGGGTTACTTGCCATATGATAGGGAATGGATCAAACAGAGGACACTTCAACGACTCAAAAAATTAGCAAGGTGAATCAAGGAGCAAACTGATTTGGGTTCTTGGTTACTGAATCGCTGCAGATCCTATTTGCAGTACTGAAAGCATTCTATCTGTAAGAACGGTGTTTATATGCACAAATTTTCTGTAATGTGAAATGTAGTTATTTTACCTTAGGATGTTGAACTAGATTTGAATCCACAGTTATGATGGCTAAAGATATACAAGGTTTAGAAAATATACACCCAACCGACTGATTTGATATTTAGCCTGTAATTGAATGACAGAAAATATATCTTTAAACACTATTGTTATCGTAATTAACAAGGCATACGATTGTACGGAGTAGTTATAGAAAAAGATATCCTCCTTTTCTCTAGACTCTAGGTGTGTATGAGAAAAGAACGGTGGTGACTGGCGAGCCTGTGAATATGTGGCATGTGAACCACCATTGAGCCTGTTGGTTTGGCTACCATGGAATAGTAGACATATTCGAGCTAATGATTTTACCAGGATTATCTAATAAATGTACATAAGTGATGTAACAATTCAATTCAATTCAAATTATTTATTTATTTGATTAGTTTTAGTCTGTACCGA CCTACGGGGATATTCTTGTTTTGCAGGTTGTAAGAAGATCGTGCCAACGCATACCTGATACCTCCGTGGAAAGGGTGACACGTCAGCACCAACAAAGTTCCCACACCATTTGGCGCCGTCTGTGGGGAGGTACAGTATCATGGCAGACCTGAAATCTGAAGGTGAGAGACATGAGGGCGACTCAAGGGAAAGGTGTCCGAGCGAAAGGAGCTCCTCGCGAACTCGTTCTCACAAAGATCTTCAGCCTACTGCTAAGGGCGCAACATTAACCATAAGACGAGTAACCACGACACCTCCCAACGCAGTAGCTAGCCGACCTGCTTCAACCAGATTACTACAACAAATGCTACATAGTTAATGTTGCGCCCTTAACAGTAAGCTGATTACCAATATTATATTATTTCTCACACTTACCTAATAACCCACCTACACCCCTACTCCCTACAACAAATCATTTAAAAATTTACGCCCACATTCACCACTCTCCATCACTTACACATTTTTCAATAACAATCAAACGGTGCAAGTATTAAGGGACGGAGGGAGTAGCTGTTAATTGAAATACACTTCCTCAGTACGGAGTATTTGGGGATTTGATTTGGTCTTTTGCTAGTCGTCGCCCGCCGTAGACCGTGGCCAGTGGGCACTTGTTGGGAGTGCGAGATTCTCTCTTTCTGTAATCGCGTTTTGCTGATACCCTTTCCTTATTCAACCTCTGCAACTTCTTCTGGCCGCCCCTATCCTTCAGTATGGATAATAAGCACACAATTATCCTAATGCAGACATCACATAACAGATCATCTCGAACATTTATGGATTATGAGTCGATAAGCCAAGCAATGGATGGTATCTGTGCATTGTATGAAAAGAAGCTGAAGGAGATAAATCCAACCCTCAGAAACATCAGTTATGACATTGGTGACTTGTACAACTTCGTTGATGGGCTTGCTGATTTGAGTGCATTAGTTTTTGATCATTCTATTCAGGGTTACTTGCCATATGATAGGGAATGGATCAAACAGAGGACACTTCAACGACTCAAAAAATTAGCAAGGTGAATCAAGGAGCAAACTGATTTGGGTTCTTGGTTACTGAATCGCTGCAGATCCTATTTGCAGTACTGAAAGCATTCTATCTGTAAGAACGGTGTTTATATGCACAAATTTTCTGTAATGTGAAATGTAGTTATTTTACCTTAGGATGTTGAACTAGATTTGAATCCACAGTTATGATGGCTAAAGATATACAAGGTTTAGAAAATATACACCCAACCGACTGATTTGATATTTAGCCTGTAATTGAATGACAGAAAATATATCTTTAAACACTATTGTTATCGTAATTAACAAGGCATACGATTGTACGGAGTAGTTATAGAAAAAGATATCCTCCTTTTCTCTAGACTCTAGGTGTGTATGAGAAAAGAACGGTGGTGACTGGCGAGCCTGTGAATATGTGGCATGTGAACCACCATTGAGCCTGTTGGTTTGGCTACCATGGAATAGTAGACATATTCGAGCTAATGATTTTACCAGGATTATCTAATAAATGTACATAAGTGATGTAACAATTCAATTCAATTCAAATTATTTATTTATTTGATTAGTTTTAGTCTGTACCGA ATGGATAATAAGCACACAATTATCCTAATGCAGACATCACATAACAGATCATCTCGAACATTTATGGATTATGAGTCGATAAGCCAAGCAATGGATGGTATCTGTGCATTGTATGAAAAGAAGCTGAAGGAGATAAATCCAACCCTCAGAAACATCAGTTATGACATTGGTGACTTGTACAACTTCGTTGATGGGCTTGCTGATTTGAGTGCATTAGTTTTTGATCATTCTATTCAGGGTTACTTGCCATATGATAGGGAATGGATCAAACAGAGGACACTTCAACGACTCAAAAAATTAGCAAGGTGA MDNKHTIILMQTSHNRSSRTFMDYESISQAMDGICALYEKKLKEINPTLRNISYDIGDLYNFVDGLADLSALVFDHSIQGYLPYDREWIKQRTLQRLKKLAR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20081.1 vs. NCBI nr
Match: gi|731320475|ref|XP_010670826.1| (PREDICTED: enhancer of rudimentary homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 192.2 bits (487), Expect = 4.500e-46 Identity = 91/102 (89.22%), Postives = 98/102 (96.08%), Query Frame = 1
BLAST of Spo20081.1 vs. NCBI nr
Match: gi|902145971|gb|KNA05017.1| (hypothetical protein SOVF_194310 [Spinacia oleracea]) HSP 1 Score: 191.0 bits (484), Expect = 9.900e-46 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Spo20081.1 vs. NCBI nr
Match: gi|657971666|ref|XP_008377624.1| (PREDICTED: enhancer of rudimentary homolog [Malus domestica]) HSP 1 Score: 183.3 bits (464), Expect = 2.100e-43 Identity = 83/101 (82.18%), Postives = 97/101 (96.04%), Query Frame = 1
BLAST of Spo20081.1 vs. NCBI nr
Match: gi|657945322|ref|XP_008379272.1| (PREDICTED: enhancer of rudimentary homolog [Malus domestica]) HSP 1 Score: 181.0 bits (458), Expect = 1.000e-42 Identity = 82/101 (81.19%), Postives = 96/101 (95.05%), Query Frame = 1
BLAST of Spo20081.1 vs. NCBI nr
Match: gi|720071930|ref|XP_010278207.1| (PREDICTED: enhancer of rudimentary homolog [Nelumbo nucifera]) HSP 1 Score: 179.1 bits (453), Expect = 3.900e-42 Identity = 82/101 (81.19%), Postives = 94/101 (93.07%), Query Frame = 1
BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCL7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194310 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 6.900e-46 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: M1CHJ6_SOLTU (Enhancer of rudimentary homolog OS=Solanum tuberosum GN=PGSC0003DMG400026283 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 4.600e-42 Identity = 81/101 (80.20%), Postives = 94/101 (93.07%), Query Frame = 1
BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: M5XNP3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012055mg PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.000e-41 Identity = 80/101 (79.21%), Postives = 94/101 (93.07%), Query Frame = 1
BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: W9RNN8_9ROSA (Enhancer of rudimentary homolog OS=Morus notabilis GN=L484_025492 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 2.300e-41 Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 1
BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Match: W1PAX4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00019p00053160 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 2.300e-41 Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 1
BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_ARATH (Enhancer of rudimentary homolog OS=Arabidopsis thaliana GN=At5g10810 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 3.100e-39 Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1
BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_DICDI (Enhancer of rudimentary homolog OS=Dictyostelium discoideum GN=erh PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.100e-27 Identity = 53/98 (54.08%), Postives = 76/98 (77.55%), Query Frame = 1
BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_AEDAE (Enhancer of rudimentary homolog OS=Aedes aegypti PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.400e-22 Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 1
BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_DANRE (Enhancer of rudimentary homolog OS=Danio rerio GN=erh PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 2.900e-21 Identity = 44/98 (44.90%), Postives = 69/98 (70.41%), Query Frame = 1
BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Match: ERH_BOVIN (Enhancer of rudimentary homolog OS=Bos taurus GN=ERH PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.800e-21 Identity = 43/98 (43.88%), Postives = 69/98 (70.41%), Query Frame = 1
BLAST of Spo20081.1 vs. TAIR (Arabidopsis)
Match: AT5G10810.1 (enhancer of rudimentary protein, putative) HSP 1 Score: 162.2 bits (409), Expect = 1.700e-40 Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20081.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20081.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20081.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo20081.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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