Spo24944 (gene) | SpinachBase

Overview


Name	Spo24944
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr1 : 29937089 .. 29937679 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAACAAGAGGTCATATTTCTTTTCCCATACATCTCTTTACTTTTTAATCATCTTATTGACATTAACACTATTTCCACAAAAGTCATTACAAGAAGCCCCTTATGTGTGCCCATATCCTTGTCTTCCACCACCTATAGGGTGGTCTACACCGACACCGGTCCTTCCACCACCTAAAACCCCCACACCCACCACCTCAAATTGTCCACCACCACCATCGCCGCCATCGACCCCCACCTACGACTATTCATCGCCGCCACCGCCAGCGACACCCAGCTACGAATATTCGTCGCCACCACCACCGTCTACGCCGGCACAATACTACTACTCCCCACCACCACCATCATCATCAGGGTACACACCAAGTTATGGTTATAATTACCCTCCTCCAAGTGGATCAATGTTCCCTTATGGTAATGCTCCTCCCCCTCCTAACCCAATTGTGCCTTACTTCCCTTATTACTACAAGAATCCACCACGTTCACCTCAAGATTCATCAGCAAACATGAACCGGTTTCGGTTACTCGGTAGTTTATGGGTGGTTTTGTTGTTATCTTCATCATCAATTCCTCTTCTTGGTTGGAGATGA

mRNA sequence

ATGACTAACAAGAGGTCATATTTCTTTTCCCATACATCTCTTTACTTTTTAATCATCTTATTGACATTAACACTATTTCCACAAAAGTCATTACAAGAAGCCCCTTATGTGTGCCCATATCCTTGTCTTCCACCACCTATAGGGTGGTCTACACCGACACCGGTCCTTCCACCACCTAAAACCCCCACACCCACCACCTCAAATTGTCCACCACCACCATCGCCGCCATCGACCCCCACCTACGACTATTCATCGCCGCCACCGCCAGCGACACCCAGCTACGAATATTCGTCGCCACCACCACCGTCTACGCCGGCACAATACTACTACTCCCCACCACCACCATCATCATCAGGGTACACACCAAGTTATGGTTATAATTACCCTCCTCCAAGTGGATCAATGTTCCCTTATGGTAATGCTCCTCCCCCTCCTAACCCAATTGTGCCTTACTTCCCTTATTACTACAAGAATCCACCACGTTCACCTCAAGATTCATCAGCAAACATGAACCGGTTTCGGTTACTCGGTAGTTTATGGGTGGTTTTGTTGTTATCTTCATCATCAATTCCTCTTCTTGGTTGGAGATGA

Coding sequence (CDS)

ATGACTAACAAGAGGTCATATTTCTTTTCCCATACATCTCTTTACTTTTTAATCATCTTATTGACATTAACACTATTTCCACAAAAGTCATTACAAGAAGCCCCTTATGTGTGCCCATATCCTTGTCTTCCACCACCTATAGGGTGGTCTACACCGACACCGGTCCTTCCACCACCTAAAACCCCCACACCCACCACCTCAAATTGTCCACCACCACCATCGCCGCCATCGACCCCCACCTACGACTATTCATCGCCGCCACCGCCAGCGACACCCAGCTACGAATATTCGTCGCCACCACCACCGTCTACGCCGGCACAATACTACTACTCCCCACCACCACCATCATCATCAGGGTACACACCAAGTTATGGTTATAATTACCCTCCTCCAAGTGGATCAATGTTCCCTTATGGTAATGCTCCTCCCCCTCCTAACCCAATTGTGCCTTACTTCCCTTATTACTACAAGAATCCACCACGTTCACCTCAAGATTCATCAGCAAACATGAACCGGTTTCGGTTACTCGGTAGTTTATGGGTGGTTTTGTTGTTATCTTCATCATCAATTCCTCTTCTTGGTTGGAGATGA

Protein sequence

MTNKRSYFFSHTSLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWSTPTPVLPPPKTPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQYYYSPPPPSSSGYTPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLWVVLLLSSSSIPLLGWR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24944.1	Spo24944.1	mRNA

Homology

[Close]

BLAST of Spo24944.1 vs. NCBI nr
Match: gi|902239345|gb|KNA25571.1| (hypothetical protein SOVF_005240 [Spinacia oleracea])

HSP 1 Score: 373.2 bits (957), Expect = 2.700e-100
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 1

		  
Query: 1   MTNKRSYFFSHTSLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWSTPTPVLPPPK 60
           MTNKRSYFFSHTSLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWSTPTPVLPPPK
Sbjct: 1   MTNKRSYFFSHTSLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWSTPTPVLPPPK 60

Query: 61  TPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQYYYSPPPPSSSGY 120
           TPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQ YYSPPPPSSSGY
Sbjct: 61  TPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQ-YYSPPPPSSSGY 120

Query: 121 TPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLW 180
           TPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLW
Sbjct: 121 TPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLW 180

Query: 181 VVLLLSSSSIPLLGWR 197
           VVLLLSSSSIPLLGWR
Sbjct: 181 VVLLLSSSSIPLLGWR 195

[Close]

BLAST of Spo24944.1 vs. NCBI nr
Match: gi|870867775|gb|KMT18644.1| (hypothetical protein BVRB_2g027730 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 202.2 bits (513), Expect = 8.300e-49
Identity = 126/192 (65.62%), Postives = 138/192 (71.88%), Query Frame = 1

		  
Query: 13  SLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWST-------PTPVLPPP-KTPTP 72
           SL+   ILLT+T  PQKSLQ+ PYVCPYPCLPPPIG ST       PTPVLPPP KTPT 
Sbjct: 8   SLHIFFILLTITTLPQKSLQDTPYVCPYPCLPPPIGGSTYPTPTTTPTPVLPPPSKTPT- 67

Query: 73  TTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQY-YYSPPPPSSSGYTPS 132
           TT+NCPPPP PPS             +P+Y YSSPPPPS+P QY YYSPPPP SSGY PS
Sbjct: 68  TTTNCPPPPLPPS-------------SPAYYYSSPPPPSSPDQYNYYSPPPPQSSGYNPS 127

Query: 133 YGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQD--SSANMNRFRLLGSLWV 192
           Y Y YPPP GSM PY N PPPPNPIVPYFPYY+KNPP SPQD  S+  M +F+LLGS WV
Sbjct: 128 YDY-YPPPGGSMLPYSNGPPPPNPIVPYFPYYFKNPPPSPQDISSATIMYKFQLLGSFWV 184

Query: 193 VLLLSSSSIPLL 194
           V L S  +  LL
Sbjct: 188 VTLFSLVAFSLL 184

[Close]

BLAST of Spo24944.1 vs. NCBI nr
Match: gi|672181536|ref|XP_008810990.1| (PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Phoenix dactylifera])

HSP 1 Score: 84.0 bits (206), Expect = 3.300e-13
Identity = 85/201 (42.29%), Postives = 102/201 (50.75%), Query Frame = 1

		  
Query: 10  SHTSLYFLIILLTLTLFPQKSLQE-APYVCPYPCLPPPIGWSTPTPVLPPPKTPTPTTSN 69
           S ++L+F +ILL    FPQ S  + +P  CPYPCLPPP                  + +N
Sbjct: 8   SISTLFFFLILLR---FPQSSFSDDSPPDCPYPCLPPPT-----------------SVTN 67

Query: 70  CPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQYYYSPPPPSSSGYTPSYGYNY 129
           CPPPP P       Y+ P P      E   PPPP TP   YY PP    SGY P   YNY
Sbjct: 68  CPPPPLP-------YTPPEP------ETGYPPPPGTPNSDYYPPP----SGYVP---YNY 127

Query: 130 PPPSGSMFPYGNAPPPPNPIVPYFPYYYKNP--PRSPQDSSANMNRFRLLGSLWVVL--L 189
           PPP  + FP   APPPPNPI+PYFP+YYK P  P S   S+  +      GSL + L  L
Sbjct: 128 PPPYNN-FP---APPPPNPILPYFPFYYKTPPLPYSSAPSAITLFGAAFRGSLALSLGFL 164

Query: 190 LS-----------SSSIPLLG 195
           LS           S+SIP+LG
Sbjct: 188 LSYMGHGLMKRSRSASIPILG 164

[Close]

BLAST of Spo24944.1 vs. NCBI nr
Match: gi|802700677|ref|XP_012083797.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas])

HSP 1 Score: 81.6 bits (200), Expect = 1.600e-12
Identity = 70/130 (53.85%), Postives = 74/130 (56.92%), Query Frame = 1

		  
Query: 38  CPYPCLPPPIGWSTPTPVLPPPKTPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPS---Y 97
           C  PC P           LPPP  P P  S CPPPPSPP  P      PPPP TPS   Y
Sbjct: 42  CDNPCQP-----------LPPP--PPPPVSECPPPPSPP-PPAVVSDCPPPPVTPSSGTY 101

Query: 98  EYSSPPPPSTPAQYYYSPPPPSSSGYTPSYGYNYPPPSGSMFPYGN--APPPPNPIVPYF 157
            YS PPPPS P   Y SPPPP +SG     G  YPPP+     YGN  APPPPNPI+PYF
Sbjct: 102 YYSPPPPPSEPTYIYSSPPPPENSG---DSGEFYPPPN-----YGNYAAPPPPNPILPYF 149

Query: 158 PYYYKNPPRS 163
           P+YY NPP S
Sbjct: 162 PFYYYNPPPS 149

[Close]

BLAST of Spo24944.1 vs. NCBI nr
Match: gi|902229762|gb|KNA21593.1| (hypothetical protein SOVF_041740 [Spinacia oleracea])

HSP 1 Score: 78.2 bits (191), Expect = 1.800e-11
Identity = 70/149 (46.98%), Postives = 84/149 (56.38%), Query Frame = 1

		  
Query: 41  PCLPPPIGWSTPTPVLPPPKTPTP---TTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYS 100
           PC P P   STP P  PPP +P P   TT+ CPPPPS PS+     S        SY YS
Sbjct: 47  PCNPYPS--STPPPPSPPPPSPPPPATTTAGCPPPPSQPSSGGGGTSG-------SYYYS 106

Query: 101 SPPPPSTPAQYYYSPPPPSSSGYTPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYK 160
           SPPPPS P+  Y  PPP    G +   GY Y PP    + YG APPPPNPIVPYFPYYY 
Sbjct: 107 SPPPPSQPSYVY--PPPSGGGGSSGGGGYYYAPP----YHYGPAPPPPNPIVPYFPYYYH 166

Query: 161 NPPRSPQDSSANMNRFRLLGSLWVVLLLS 187
           +PP  P+++ + + R  +  S  + L  S
Sbjct: 167 SPP--PRNTGSTLFRNSIFCSFLLPLFFS 178

[Close]

BLAST of Spo24944.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1E7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_005240 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.900e-100
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 1

		  
Query: 1   MTNKRSYFFSHTSLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWSTPTPVLPPPK 60
           MTNKRSYFFSHTSLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWSTPTPVLPPPK
Sbjct: 1   MTNKRSYFFSHTSLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWSTPTPVLPPPK 60

Query: 61  TPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQYYYSPPPPSSSGY 120
           TPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQ YYSPPPPSSSGY
Sbjct: 61  TPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQ-YYSPPPPSSSGY 120

Query: 121 TPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLW 180
           TPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLW
Sbjct: 121 TPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLW 180

Query: 181 VVLLLSSSSIPLLGWR 197
           VVLLLSSSSIPLLGWR
Sbjct: 181 VVLLLSSSSIPLLGWR 195

[Close]

BLAST of Spo24944.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D2W6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g027730 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.800e-49
Identity = 126/192 (65.62%), Postives = 138/192 (71.88%), Query Frame = 1

		  
Query: 13  SLYFLIILLTLTLFPQKSLQEAPYVCPYPCLPPPIGWST-------PTPVLPPP-KTPTP 72
           SL+   ILLT+T  PQKSLQ+ PYVCPYPCLPPPIG ST       PTPVLPPP KTPT 
Sbjct: 8   SLHIFFILLTITTLPQKSLQDTPYVCPYPCLPPPIGGSTYPTPTTTPTPVLPPPSKTPT- 67

Query: 73  TTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQY-YYSPPPPSSSGYTPS 132
           TT+NCPPPP PPS             +P+Y YSSPPPPS+P QY YYSPPPP SSGY PS
Sbjct: 68  TTTNCPPPPLPPS-------------SPAYYYSSPPPPSSPDQYNYYSPPPPQSSGYNPS 127

Query: 133 YGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQD--SSANMNRFRLLGSLWV 192
           Y Y YPPP GSM PY N PPPPNPIVPYFPYY+KNPP SPQD  S+  M +F+LLGS WV
Sbjct: 128 YDY-YPPPGGSMLPYSNGPPPPNPIVPYFPYYFKNPPPSPQDISSATIMYKFQLLGSFWV 184

Query: 193 VLLLSSSSIPLL 194
           V L S  +  LL
Sbjct: 188 VTLFSLVAFSLL 184

[Close]

BLAST of Spo24944.1 vs. UniProtKB/TrEMBL
Match: A0A067JWJ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13988 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.100e-12
Identity = 70/130 (53.85%), Postives = 74/130 (56.92%), Query Frame = 1

		  
Query: 38  CPYPCLPPPIGWSTPTPVLPPPKTPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPS---Y 97
           C  PC P           LPPP  P P  S CPPPPSPP  P      PPPP TPS   Y
Sbjct: 42  CDNPCQP-----------LPPP--PPPPVSECPPPPSPP-PPAVVSDCPPPPVTPSSGTY 101

Query: 98  EYSSPPPPSTPAQYYYSPPPPSSSGYTPSYGYNYPPPSGSMFPYGN--APPPPNPIVPYF 157
            YS PPPPS P   Y SPPPP +SG     G  YPPP+     YGN  APPPPNPI+PYF
Sbjct: 102 YYSPPPPPSEPTYIYSSPPPPENSG---DSGEFYPPPN-----YGNYAAPPPPNPILPYF 149

Query: 158 PYYYKNPPRS 163
           P+YY NPP S
Sbjct: 162 PFYYYNPPPS 149

[Close]

BLAST of Spo24944.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041740 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.300e-11
Identity = 70/149 (46.98%), Postives = 84/149 (56.38%), Query Frame = 1

		  
Query: 41  PCLPPPIGWSTPTPVLPPPKTPTP---TTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYS 100
           PC P P   STP P  PPP +P P   TT+ CPPPPS PS+     S        SY YS
Sbjct: 47  PCNPYPS--STPPPPSPPPPSPPPPATTTAGCPPPPSQPSSGGGGTSG-------SYYYS 106

Query: 101 SPPPPSTPAQYYYSPPPPSSSGYTPSYGYNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYK 160
           SPPPPS P+  Y  PPP    G +   GY Y PP    + YG APPPPNPIVPYFPYYY 
Sbjct: 107 SPPPPSQPSYVY--PPPSGGGGSSGGGGYYYAPP----YHYGPAPPPPNPIVPYFPYYYH 166

Query: 161 NPPRSPQDSSANMNRFRLLGSLWVVLLLS 187
           +PP  P+++ + + R  +  S  + L  S
Sbjct: 167 SPP--PRNTGSTLFRNSIFCSFLLPLFFS 178

[Close]

BLAST of Spo24944.1 vs. UniProtKB/TrEMBL
Match: W9R6I3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007754 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.700e-11
Identity = 63/134 (47.01%), Postives = 73/134 (54.48%), Query Frame = 1

		  
Query: 46  PIGWSTPTPVLPPPKTPTPTTSNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTP 105
           P G + P+P  P P  P+ ++S CPPPPS                  S  YSSPPPPS  
Sbjct: 50  PCGGAVPSPPPPSPPPPSSSSSICPPPPS------------------SISYSSPPPPSQS 109

Query: 106 AQYYYSPPPPSSSGYTPSYG--YNYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPP--- 165
           +  YYSPPPPSSSG     G  YN P P    +P   APPPPNPIVPYFP+YY +PP   
Sbjct: 110 SYPYYSPPPPSSSGGGGGGGVYYNPPVPYNKNYP---APPPPNPIVPYFPFYYHSPPPPS 162

Query: 166 RSPQDSSANMNRFR 175
            SP  SS   +R R
Sbjct: 170 NSPSSSSPRTSRAR 162

[Close]

BLAST of Spo24944.1 vs. TAIR (Arabidopsis)
Match: AT4G16140.1 (proline-rich family protein)

HSP 1 Score: 61.6 bits (148), Expect = 6.200e-10
Identity = 65/153 (42.48%), Postives = 73/153 (47.71%), Query Frame = 1

		  
Query: 11  HTSLYFLIILLTLTLFPQKSLQEAPYV--CPYPCLPPPIGWSTPTPVLPPPKTPTPTTSN 70
           H  L+F     T TL     + +      C  PC P P     P P  P P  P+PTT+ 
Sbjct: 8   HLFLFFFFFTFTTTLTSPSQIADCTMCTSCDNPCQPNPS--PPPPPSNPSPPPPSPTTTA 67

Query: 71  CPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQYYYSPPPPSSSGYTPSYGYNY 130
           CPPPPS      Y Y    PPA+ S  Y               PPP SSSG     GY Y
Sbjct: 68  CPPPPSSSGGGPYYYY---PPASQSGSYR--------------PPPSSSSG-----GYYY 127

Query: 131 PPP-SGSMFPYGNAPPPPNPIVPYFPYYYKNPP 161
           PPP SG  +PY    PPPNPIVPYFP+YY NPP
Sbjct: 128 PPPKSGGNYPY---TPPPNPIVPYFPFYYYNPP 133

[Close]

BLAST of Spo24944.1 vs. TAIR (Arabidopsis)
Match: AT5G49280.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.600e-8
Identity = 65/178 (36.52%), Postives = 85/178 (47.75%), Query Frame = 1

		  
Query: 13  SLYFLIILLTLTLFPQKSLQEAPYVCPY------PCLPPPIGWSTPTPVLPPPKTPTPTT 72
           +L  L+++L +++ P  + ++    C        PC   P+  S P P  PPP TPT   
Sbjct: 8   TLSTLVVMLLVSVTPTVTSKDEVVSCTMCSSCDNPC--SPVQSSPPPPSPPPPSTPTTA- 67

Query: 73  SNCPPPPSPPSTPTYDYSSPPPPATPSYEYSSPPPPSTPAQYYYSPPPPSSSGYTPSYGY 132
             CPPPPSPPS+              SY Y   PPPS        PPP    G     GY
Sbjct: 68  --CPPPPSPPSS----------GGGSSYYY---PPPSQSGGGSKYPPPYGGGG----QGY 127

Query: 133 NYPPPSGSMFPYGNAPPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLWVVLL 185
            YPPP    +P    PPPPNPIVPYFP+YY  PP     S   M+ + ++ +L+ V L
Sbjct: 128 YYPPPYSGNYP---TPPPPNPIVPYFPFYYHTPPPG-SGSDRFMSSYSIIFALFAVFL 159

[Close]

BLAST of Spo24944.1 vs. TAIR (Arabidopsis)
Match: AT3G06750.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 55.1 bits (131), Expect = 5.800e-8
Identity = 47/106 (44.34%), Postives = 55/106 (51.89%), Query Frame = 1

		  
Query: 100 PPPSTPAQYYYSPPPPSSSGYTPSYGYNYPPPS----------------GSMFP---YGN 159
           P    P+ Y   PPPPSSSG   SY Y+ PPPS                G  +P   YGN
Sbjct: 41  PCNPVPSSYSPPPPPPSSSGGGGSYYYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGN 100

Query: 160 --APPPPNPIVPYFPYYYKNPPRSPQDSSANMNRFRLLGSLWVVLL 185
              PPPPNPIVPYFP+YY  PP+    S+   N   LL +L+ VLL
Sbjct: 101 YGTPPPPNPIVPYFPFYYHTPPQGYSGSARLQN--SLLFALFAVLL 144

[Close]

BLAST of Spo24944.1 vs. TAIR (Arabidopsis)
Match: AT1G70985.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.400e-6
Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = 1

		  
Query: 105 PAQYYYSP----PPPSSSGYTPSYGYNYP-PPSGSMFPYG--NAPPPPNPIVPYFPYYYK 164
           PA YY  P    PPPSSS        NYP PP     P G  N PPPP+PI+PYFP+YY+
Sbjct: 47  PAGYYPQPTGYYPPPSSSNVP-----NYPSPPYYGGNPSGGYNGPPPPDPILPYFPFYYR 106

Query: 165 NPPRSPQDSSANMN---RFRLLGSLWVVLLLSS 188
            PP     SS++M    +   + +L  VL+L S
Sbjct: 107 KPPHQTDQSSSSMKSTVKIVTVANLLAVLMLFS 134

[Close]

BLAST of Spo24944.1 vs. TAIR (Arabidopsis)
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.200e-6
Identity = 64/150 (42.67%), Postives = 74/150 (49.33%), Query Frame = 1

		  
Query: 27  PQKSLQEAPYVCPYPCLPPPIGWSTPTPVLPPPKTPTPTTSNCPPPPS----PPSTPTYD 86
           PQ  +   P   P P LP P     P    PPP  P   +S  PPPP     PP TPTY 
Sbjct: 695 PQSPIYGTPPPSPIPYLPSP-----PQFASPPPPAPYYYSSPQPPPPPHYSLPPPTPTYH 754

Query: 87  YSSPPPPATPSYEYSSPPPPSTPAQYYYSPPPPSSSGYT----PSYGYNYPPPSGSMFPY 146
           Y SPPPP TP +   SPPP S P    YSPPPP +  Y     PS  +  PPPS  ++ Y
Sbjct: 755 YISPPPPPTPIH---SPPPQSHPPCIEYSPPPPPTVHYNPPPPPSPAHYSPPPSPPVY-Y 814

Query: 147 GNAPPPPNPIVPYFP-----YYYKNPPRSP 164
            N+PPPP P V Y P      ++  PP  P
Sbjct: 815 YNSPPPP-PAVHYSPPPPPVIHHSQPPPPP 834

The following BLAST results are available for this feature:

BLAST of Spo24944.1 vs. NCBI nr
BLAST of Spo24944.1 vs. UniProtKB/TrEMBL
BLAST of Spo24944.1 vs. ExPASy Swiss-Prot
BLAST of Spo24944.1 vs. TAIR (Arabidopsis)

BLAST of Spo24944.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

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Match Name	E-value	Identity	Description
gi\|902239345\|gb\|KNA25571.1\|	2.7e-100	99.4	hypothetical protein SOVF_0052...	[more]
gi\|870867775\|gb\|KMT18644.1\|	8.3e-49	65.6	hypothetical protein BVRB_2g02...	[more]
gi\|672181536\|ref\|XP_008810990.1\|	3.3e-13	42.2	PREDICTED: ent-kaur-16-ene syn...	[more]
gi\|802700677\|ref\|XP_012083797.1\|	1.6e-12	53.8	PREDICTED: leucine-rich repeat...	[more]
gi\|902229762\|gb\|KNA21593.1\|	1.8e-11	46.9	hypothetical protein SOVF_0417...	[more]

BLAST of Spo24944.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9S1E7_SPIOL	1.9e-100	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8D2W6_BETVU	5.8e-49	65.6	Uncharacterized protein OS=Bet...	[more]
A0A067JWJ5_JATCU	1.1e-12	53.8	Uncharacterized protein OS=Jat...	[more]
A0A0K9RQ38_SPIOL	1.3e-11	46.9	Uncharacterized protein OS=Spi...	[more]
W9R6I3_9ROSA	3.7e-11	47.0	Uncharacterized protein OS=Mor...	[more]

BLAST of Spo24944.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

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Match Name	E-value	Identity	Description

BLAST of Spo24944.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT4G16140.1	6.2e-10	42.4	proline-rich family protein	[more]
AT5G49280.1	2.6e-8	36.5	hydroxyproline-rich glycoprote...	[more]
AT3G06750.1	5.8e-8	44.3	hydroxyproline-rich glycoprote...	[more]
AT1G70985.1	1.4e-6	44.0	hydroxyproline-rich glycoprote...	[more]
AT4G18670.1	3.2e-6	42.6	Leucine-rich repeat (LRR) fami...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 64..80 score: 4.9E-9coord: 41..62 score: 4.9E-9coord: 88..105 score: 4.9E-9coord: 110..135 score: 4.

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006508	proteolysis
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0000302	response to reactive oxygen species
biological_process	GO:0009627	systemic acquired resistance
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0005509	calcium ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25340	0.73	Barchart \| Table
Spo25304	0.72	Barchart \| Table
Spo16636	0.69	Barchart \| Table
Spo25990	0.68	Barchart \| Table
Spo17761	0.68	Barchart \| Table
Spo18201	0.67	Barchart \| Table
Spo13906	0.66	Barchart \| Table
Spo09139	0.65	Barchart \| Table
Spo11336	0.65	Barchart \| Table
Spo09735	0.65	Barchart \| Table