Spo00196 (gene) | SpinachBase

Overview


Name	Spo00196
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	DUF4228 domain protein
Location	chr1 : 31284803 .. 31285327 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAATTACGCATCTTGTGCATTGTCAACAATCGGCAAACATAAATCAGCGAAAGTAATCATGCCATCAGGAGAAGTGAAGCAATTTCAGCAACCCATGAAAGCGGCGGAACTTATGCTTGAGATCCCGGGATATTTCCTCGTTAATTCCAAAGCTTTAAAAATTGGAAGGAAATTTTCAGCTCTTAATGCAGATGAAGATCTAGAGATCGGGAACGTTTACGTCATGTTTGGGATGAAGAGGGTGAATTCCCTTATTACAGCTGCTGATATGGGGGCTCTTTTCCTTGTTGCCAAACGCGGCTCTATCGGTGGCAACAAGGTTAGAGTAGTTCCATCATGGTCCGTCGAGAGTGATTCACCACCGCCGCATGCGGAGGAGGAGGAGGAGGCGCTTGATGACATGAAGGTCATGGTTGAGGAGTTGTTGTCGGAGTTTCAACATAGGAGGTCTATTTGCCGGTCTAAGAAACCGGTTCTTGAAACTATTGTGGAAGAACCTGTTAGTATTTTCTCACGGTGA

mRNA sequence

ATGGGTAATTACGCATCTTGTGCATTGTCAACAATCGGCAAACATAAATCAGCGAAAGTAATCATGCCATCAGGAGAAGTGAAGCAATTTCAGCAACCCATGAAAGCGGCGGAACTTATGCTTGAGATCCCGGGATATTTCCTCGTTAATTCCAAAGCTTTAAAAATTGGAAGGAAATTTTCAGCTCTTAATGCAGATGAAGATCTAGAGATCGGGAACGTTTACGTCATGTTTGGGATGAAGAGGGTGAATTCCCTTATTACAGCTGCTGATATGGGGGCTCTTTTCCTTGTTGCCAAACGCGGCTCTATCGGTGGCAACAAGGTTAGAGTAGTTCCATCATGGTCCGTCGAGAGTGATTCACCACCGCCGCATGCGGAGGAGGAGGAGGAGGCGCTTGATGACATGAAGGTCATGGTTGAGGAGTTGTTGTCGGAGTTTCAACATAGGAGGTCTATTTGCCGGTCTAAGAAACCGGTTCTTGAAACTATTGTGGAAGAACCTGTTAGTATTTTCTCACGGTGA

Coding sequence (CDS)

ATGGGTAATTACGCATCTTGTGCATTGTCAACAATCGGCAAACATAAATCAGCGAAAGTAATCATGCCATCAGGAGAAGTGAAGCAATTTCAGCAACCCATGAAAGCGGCGGAACTTATGCTTGAGATCCCGGGATATTTCCTCGTTAATTCCAAAGCTTTAAAAATTGGAAGGAAATTTTCAGCTCTTAATGCAGATGAAGATCTAGAGATCGGGAACGTTTACGTCATGTTTGGGATGAAGAGGGTGAATTCCCTTATTACAGCTGCTGATATGGGGGCTCTTTTCCTTGTTGCCAAACGCGGCTCTATCGGTGGCAACAAGGTTAGAGTAGTTCCATCATGGTCCGTCGAGAGTGATTCACCACCGCCGCATGCGGAGGAGGAGGAGGAGGCGCTTGATGACATGAAGGTCATGGTTGAGGAGTTGTTGTCGGAGTTTCAACATAGGAGGTCTATTTGCCGGTCTAAGAAACCGGTTCTTGAAACTATTGTGGAAGAACCTGTTAGTATTTTCTCACGGTGA

Protein sequence

MGNYASCALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKFSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVESDSPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00196.1	Spo00196.1	mRNA

Homology

[Close]

BLAST of Spo00196.1 vs. NCBI nr
Match: gi|902191108|gb|KNA11767.1| (hypothetical protein SOVF_132030 [Spinacia oleracea])

HSP 1 Score: 339.7 bits (870), Expect = 2.900e-90
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1

		  
Query: 1   MGNYASCALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKF 60
           MGNYASCALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKF
Sbjct: 1   MGNYASCALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKF 60

Query: 61  SALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVESD 120
           SALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVESD
Sbjct: 61  SALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVESD 120

Query: 121 SPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR 175
           SPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR
Sbjct: 121 SPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR 174

[Close]

BLAST of Spo00196.1 vs. NCBI nr
Match: gi|731315942|ref|XP_010693577.1| (PREDICTED: uncharacterized protein LOC104906507 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 244.6 bits (623), Expect = 1.300e-61
Identity = 131/175 (74.86%), Postives = 150/175 (85.71%), Query Frame = 1

		  
Query: 1   MGNYASCALST-IGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRK 60
           MGNYASCALST  GK+KSAKVI+PSGE+KQFQQ +KAAELMLEIP YFLVNSK+L+IG++
Sbjct: 1   MGNYASCALSTQFGKNKSAKVILPSGEIKQFQQSIKAAELMLEIPNYFLVNSKSLQIGKR 60

Query: 61  FSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVES 120
           FSALNADEDLE+GNVYVMFGMKRVNS + AADMGA++LVAKRG+    KVRVVPS+S+ES
Sbjct: 61  FSALNADEDLEMGNVYVMFGMKRVNSFVNAADMGAVYLVAKRGA---RKVRVVPSYSIES 120

Query: 121 DSPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR 175
           DSP       EE   ++K  +EELLSEF HRRS+CRSKKPVLETIVEEPV  FSR
Sbjct: 121 DSPA-----REEDAPEIKAEIEELLSEFTHRRSVCRSKKPVLETIVEEPV--FSR 165

[Close]

BLAST of Spo00196.1 vs. NCBI nr
Match: gi|645246296|ref|XP_008229288.1| (PREDICTED: uncharacterized protein LOC103328658 [Prunus mume])

HSP 1 Score: 183.0 bits (463), Expect = 4.600e-43
Identity = 109/197 (55.33%), Postives = 128/197 (64.97%), Query Frame = 1

		  
Query: 1   MGNYASCALST-IGKHKSA--KVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIG 60
           MGNY SC LST I K+  A  KVI+PSGE+KQF  PMKAAELMLE P +FLVN+K+L IG
Sbjct: 52  MGNYVSCTLSTQIAKNSKAATKVIVPSGEIKQFYVPMKAAELMLETPNFFLVNTKSLHIG 111

Query: 61  RKFSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGS--IGGNKVRVVPSW 120
           R+FSALNADEDLEIG+VYVMF MKR+NS +T ADMGALFL A   +  + G  VRV P+ 
Sbjct: 112 RRFSALNADEDLEIGDVYVMFPMKRLNSTVTPADMGALFLTASSATKRLSGRNVRVQPAE 171

Query: 121 SVESDSPPPHAEEEEEALDDMKVMVEEL------------------LSEFQHRRSICRSK 175
               +      +EEEE    M+   E L                    EF HR S+CRSK
Sbjct: 172 DKSGELDDDDDDEEEEDNKRMENWRENLDHEAAKPKLNLDDIEDFSAPEFMHRLSMCRSK 231

[Close]

BLAST of Spo00196.1 vs. NCBI nr
Match: gi|595945583|ref|XP_007216061.1| (hypothetical protein PRUPE_ppa017741mg [Prunus persica])

HSP 1 Score: 182.2 bits (461), Expect = 7.900e-43
Identity = 108/197 (54.82%), Postives = 128/197 (64.97%), Query Frame = 1

		  
Query: 1   MGNYASCALST-IGKHKSA--KVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIG 60
           MGNY SC LST I K+  A  KVI+P+GE+KQF  PMKAAELMLE P +FLVN+K+L IG
Sbjct: 1   MGNYVSCTLSTQIAKNSKAATKVIVPTGEIKQFYVPMKAAELMLETPNFFLVNTKSLHIG 60

Query: 61  RKFSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGS--IGGNKVRVVPSW 120
           R+FSALNADEDLEIG VYVMF MKR+NS++T ADMGALFL A   +  + G  +RV P+ 
Sbjct: 61  RRFSALNADEDLEIGEVYVMFPMKRLNSIVTPADMGALFLTASSAAKRLSGRNMRVQPAE 120

Query: 121 SVESDSPPPHAEEEEEALDDMKVMVEEL------------------LSEFQHRRSICRSK 175
               +      EEEEE    M+   E L                    EF HR S+CRSK
Sbjct: 121 DQSGELADDDDEEEEEDNKRMENWRENLEHEAAKPKLNLDDIEDFSAPEFMHRVSMCRSK 180

[Close]

BLAST of Spo00196.1 vs. NCBI nr
Match: gi|1009128302|ref|XP_015881158.1| (PREDICTED: uncharacterized protein LOC107417109 [Ziziphus jujuba])

HSP 1 Score: 174.9 bits (442), Expect = 1.300e-40
Identity = 104/191 (54.45%), Postives = 127/191 (66.49%), Query Frame = 1

		  
Query: 1   MGNYASCALST--IGKH--KSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKI 60
           MGNY SC LST  IGK   K+ KVI P GEV+QF  P KAAELMLE+P +F+VN+ +L+I
Sbjct: 1   MGNYVSCTLSTPGIGKQHCKATKVIFPGGEVRQFYTPTKAAELMLEMPNFFVVNTMSLRI 60

Query: 61  GRKFSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGS---IGGNKVRVVP 120
           GR+FSALNADEDLE+GNVYVMF MKRVNS++TA DMGALF+ A   +   + G KV+++P
Sbjct: 61  GRRFSALNADEDLEMGNVYVMFPMKRVNSVVTAGDMGALFITANSAAKQRVSGGKVKLLP 120

Query: 121 SWSVESDSPPPHAEE-------------EEEALDDMKVMVEELLSEFQHRRSICRSKKPV 172
              VE        EE              +  LDD++   E    EF HR S+CRSKKP+
Sbjct: 121 ESGVEVALQQKFVEEYANDCGNKDPTPAPKLNLDDIE---EFSTPEFIHRMSMCRSKKPL 180

[Close]

BLAST of Spo00196.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QWX0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_132030 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.100e-90
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1

		  
Query: 1   MGNYASCALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKF 60
           MGNYASCALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKF
Sbjct: 1   MGNYASCALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKF 60

Query: 61  SALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVESD 120
           SALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVESD
Sbjct: 61  SALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVESD 120

Query: 121 SPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR 175
           SPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR
Sbjct: 121 SPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR 174

[Close]

BLAST of Spo00196.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FSC0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g027410 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.000e-62
Identity = 131/175 (74.86%), Postives = 150/175 (85.71%), Query Frame = 1

		  
Query: 1   MGNYASCALST-IGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRK 60
           MGNYASCALST  GK+KSAKVI+PSGE+KQFQQ +KAAELMLEIP YFLVNSK+L+IG++
Sbjct: 1   MGNYASCALSTQFGKNKSAKVILPSGEIKQFQQSIKAAELMLEIPNYFLVNSKSLQIGKR 60

Query: 61  FSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVES 120
           FSALNADEDLE+GNVYVMFGMKRVNS + AADMGA++LVAKRG+    KVRVVPS+S+ES
Sbjct: 61  FSALNADEDLEMGNVYVMFGMKRVNSFVNAADMGAVYLVAKRGA---RKVRVVPSYSIES 120

Query: 121 DSPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPVSIFSR 175
           DSP       EE   ++K  +EELLSEF HRRS+CRSKKPVLETIVEEPV  FSR
Sbjct: 121 DSPA-----REEDAPEIKAEIEELLSEFTHRRSVCRSKKPVLETIVEEPV--FSR 165

[Close]

BLAST of Spo00196.1 vs. UniProtKB/TrEMBL
Match: M5XDU1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017741mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.500e-43
Identity = 108/197 (54.82%), Postives = 128/197 (64.97%), Query Frame = 1

		  
Query: 1   MGNYASCALST-IGKHKSA--KVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIG 60
           MGNY SC LST I K+  A  KVI+P+GE+KQF  PMKAAELMLE P +FLVN+K+L IG
Sbjct: 1   MGNYVSCTLSTQIAKNSKAATKVIVPTGEIKQFYVPMKAAELMLETPNFFLVNTKSLHIG 60

Query: 61  RKFSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGS--IGGNKVRVVPSW 120
           R+FSALNADEDLEIG VYVMF MKR+NS++T ADMGALFL A   +  + G  +RV P+ 
Sbjct: 61  RRFSALNADEDLEIGEVYVMFPMKRLNSIVTPADMGALFLTASSAAKRLSGRNMRVQPAE 120

Query: 121 SVESDSPPPHAEEEEEALDDMKVMVEEL------------------LSEFQHRRSICRSK 175
               +      EEEEE    M+   E L                    EF HR S+CRSK
Sbjct: 121 DQSGELADDDDEEEEEDNKRMENWRENLEHEAAKPKLNLDDIEDFSAPEFMHRVSMCRSK 180

[Close]

BLAST of Spo00196.1 vs. UniProtKB/TrEMBL
Match: W9SQ68_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027115 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.700e-40
Identity = 97/180 (53.89%), Postives = 132/180 (73.33%), Query Frame = 1

		  
Query: 1   MGNYASCALSTIGKH----KSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKI 60
           MGNY SC LST+G      K+AKVI P GE+++F +P+KAAELMLE+P +FLVNS +L+I
Sbjct: 1   MGNYVSCTLSTLGGKQPACKAAKVIFPGGELRKFDEPIKAAELMLEMPNFFLVNSCSLQI 60

Query: 61  GRKFSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWS 120
           GR+FSALNADEDLE+GNVYVMF M+RVNS++TAADMGA+FLVAK+ ++ G K RV+P+ +
Sbjct: 61  GRRFSALNADEDLEMGNVYVMFPMQRVNSVVTAADMGAIFLVAKK-AVSGGKKRVLPAEA 120

Query: 121 VESDSPPPHAEEEEEALDDM------KVMVEEL----LSEFQHRRSICRSKKPVLETIVE 167
            E+     +  ++    D +      K+ ++++      EF HR S+ RSKKP+LETIVE
Sbjct: 121 GEAAVAIGNLRKDNIDHDHVAAAPAPKLNLDDIEDFSAPEFMHRLSMSRSKKPLLETIVE 179

[Close]

BLAST of Spo00196.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TWL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G341800 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.700e-39
Identity = 91/173 (52.60%), Postives = 125/173 (72.25%), Query Frame = 1

		  
Query: 1   MGNYASCALST--IGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGR 60
           MGNY SC L+T  I   K+A+VI+P GE++QF++P+KAAELMLE P +FL NS++L IG+
Sbjct: 1   MGNYVSCTLATPLIKSGKAARVILPGGEIRQFREPVKAAELMLECPNFFLTNSQSLHIGK 60

Query: 61  KFSALNADEDLEIGNVYVMFGMKRVNSLITAADMGALFLVAKRGS--IGGNKVRVVPSWS 120
           +FSAL ADE+LE+GNV++MF MKR+NS+ITAADM  LF+ A   +  I   KVRV+P   
Sbjct: 61  RFSALTADEELELGNVFLMFPMKRLNSVITAADMAILFMAANSSAKRISSGKVRVLPETG 120

Query: 121 VESDSPPPHAEEEEEALDDMKVMVEELLSEFQHRRSICRSKKPVLETIVEEPV 170
              D       E+E+++   ++ +E  + EF+HR S+CRS+KP LETI EEPV
Sbjct: 121 NVED-------EQEKSMGGTRLSLEG-VEEFKHRLSVCRSRKPSLETIKEEPV 165

[Close]

BLAST of Spo00196.1 vs. TAIR (Arabidopsis)
Match: AT5G17350.1 (unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.300e-29
Identity = 84/188 (44.68%), Postives = 107/188 (56.91%), Query Frame = 1

		  
Query: 1   MGNYASCALSTIGKHKS--AKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGR 60
           MGNY S ALS      S  AKVI+P G V+    PMKAAELM+EIP +FLV++K+LKIGR
Sbjct: 1   MGNYVSSALSKTSSSSSSAAKVILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLKIGR 60

Query: 61  KFSALNADEDLEIG--NVYVMFGMKRVNSLITAADMGALFLVAK---RGSIGGNKVRVVP 120
           KF  L AD+DL+I   +VYV F M R  S   A+D+  LF+ AK   R  +G +      
Sbjct: 61  KFCPLAADDDLQIKGCHVYVAFPMTRATSAANASDLARLFVAAKKQRRHRVGSDHSSAAV 120

Query: 121 SWSVESDSPPPHAEEEEEALDDMKVM----------VEEL-LSEFQHRRSICRSKKPVLE 171
                +    P  E      DD+KV+          +EE   +EF HR S+ +SKKP LE
Sbjct: 121 KHCHNNGRVSPDGEG-----DDVKVISAGSKLNLEDIEEFSAAEFMHRISVSKSKKPKLE 180

[Close]

BLAST of Spo00196.1 vs. TAIR (Arabidopsis)
Match: AT3G03280.1 (unknown protein)

HSP 1 Score: 124.4 bits (311), Expect = 6.900e-29
Identity = 74/175 (42.29%), Postives = 104/175 (59.43%), Query Frame = 1

		  
Query: 1   MGNYASCALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKF 60
           MGNY SCAL+       AKVI+P G V+    P KAAELM+E+P YFLV++K++K+GRKF
Sbjct: 1   MGNYVSCALNKTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGRKF 60

Query: 61  SALNADEDLEIG--NVYVMFGMKRVNSLITAADMGALFLVAKRGSIGGNKVRVVPSWSVE 120
             L AD+DL++G  +VYV F M R  S   A+DM  L+L  K+ +      RV       
Sbjct: 61  IPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTGKKRTKNCGHRRV------- 120

Query: 121 SDSPPPHAEEEEEALDDMKVMVEEL----LSEFQHRRSICRSKKPVLETIVEEPV 170
               P + + ++  L   K+ +E++     +EF HR S+ +SKKP LETI E+ V
Sbjct: 121 ---SPENEDNDDVRLIGPKLNLEDIEEFSAAEFIHRISVSKSKKPQLETIAEDHV 165

[Close]

BLAST of Spo00196.1 vs. TAIR (Arabidopsis)
Match: AT4G37240.1 (unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.100e-7
Identity = 31/110 (28.18%), Postives = 58/110 (52.73%), Query Frame = 1

		  
Query: 7   CALSTIGKHKSAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKFSALNAD 66
           C+ S   +  +AK+I+  G + +F  P+K   ++L+ P  F+ NS  +      +A++AD
Sbjct: 4   CSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISAD 63

Query: 67  EDLEIGNVYVMFGMKRVNSLITAADMGALFLVAK----RGSIGGNKVRVV 113
           E+L++G +Y    +  +   + A +M AL + A     RG  GG + + V
Sbjct: 64  EELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRRKCV 113

[Close]

BLAST of Spo00196.1 vs. TAIR (Arabidopsis)
Match: AT2G23690.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.600e-6
Identity = 28/100 (28.00%), Postives = 52/100 (52.00%), Query Frame = 1

		  
Query: 17  SAKVIMPSGEVKQFQQPMKAAELMLEIPGYFLVNSKALKIGRKFSALNADEDLEIGNVYV 76
           +AK+I+  G + +F  P+K   ++ + P  F+ NS  +      SA++ADE+ ++G +Y 
Sbjct: 14  TAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAISADEEFQLGQLYF 73

Query: 77  MFGMKRVNSLITAADMGAL------FLVAKRGSIGGNKVR 111
              +  ++  + A +M AL       L+   GS G +K R
Sbjct: 74  ALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCR 113

The following BLAST results are available for this feature:

BLAST of Spo00196.1 vs. NCBI nr
BLAST of Spo00196.1 vs. UniProtKB/TrEMBL
BLAST of Spo00196.1 vs. ExPASy Swiss-Prot
BLAST of Spo00196.1 vs. TAIR (Arabidopsis)

BLAST of Spo00196.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902191108\|gb\|KNA11767.1\|	2.9e-90	100.	hypothetical protein SOVF_1320...	[more]
gi\|731315942\|ref\|XP_010693577.1\|	1.3e-61	74.8	PREDICTED: uncharacterized pro...	[more]
gi\|645246296\|ref\|XP_008229288.1\|	4.6e-43	55.3	PREDICTED: uncharacterized pro...	[more]
gi\|595945583\|ref\|XP_007216061.1\|	7.9e-43	54.8	hypothetical protein PRUPE_ppa...	[more]
gi\|1009128302\|ref\|XP_015881158.1\|	1.3e-40	54.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo00196.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QWX0_SPIOL	2.1e-90	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FSC0_BETVU	9.0e-62	74.8	Uncharacterized protein OS=Bet...	[more]
M5XDU1_PRUPE	5.5e-43	54.8	Uncharacterized protein OS=Pru...	[more]
W9SQ68_9ROSA	5.7e-40	53.8	Uncharacterized protein OS=Mor...	[more]
A0A0D2TWL7_GOSRA	3.7e-39	52.6	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo00196.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

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Match Name	E-value	Identity	Description

BLAST of Spo00196.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

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Match Name	E-value	Identity	Description
AT5G17350.1	5.3e-29	44.6	unknown protein	[more]
AT3G03280.1	6.9e-29	42.2	unknown protein	[more]
AT4G37240.1	1.1e-7	28.1	unknown protein	[more]
AT2G23690.1	1.6e-6	28.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..166 score: 3.1
None	No IPR available	unknown	Coil	Coil	coord: 126..146 scor
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 2..171 score: 3.1
None	No IPR available	PANTHER	PTHR33052:SF31	SUBFAMILY NOT NAMED	coord: 2..171 score: 3.1

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12328	0.76	Barchart \| Table
Spo03558	0.74	Barchart \| Table
Spo00611	0.73	Barchart \| Table
Spo10826	0.72	Barchart \| Table
Spo09635	0.72	Barchart \| Table
Spo19888	0.71	Barchart \| Table
Spo25831	0.70	Barchart \| Table
Spo02091	0.70	Barchart \| Table
Spo02824	0.70	Barchart \| Table
Spo11186	0.70	Barchart \| Table
Spo21509	0.70	Barchart \| Table
Spo23842	0.70	Barchart \| Table
Spo09051	0.69	Barchart \| Table
Spo08769	0.68	Barchart \| Table
Spo17725	0.68	Barchart \| Table
Spo19868	0.68	Barchart \| Table
Spo09368	0.68	Barchart \| Table
Spo10485	0.67	Barchart \| Table
Spo22164	0.66	Barchart \| Table
Spo23036	0.66	Barchart \| Table
Spo23779	0.66	Barchart \| Table
Spo21785	0.66	Barchart \| Table
Spo13181	0.66	Barchart \| Table
Spo14682	0.66	Barchart \| Table
Spo07784	0.66	Barchart \| Table
Spo25769	0.66	Barchart \| Table
Spo00618	0.66	Barchart \| Table
Spo23057	0.65	Barchart \| Table