Spo18502 (gene) | SpinachBase

Overview


Name	Spo18502
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ankyrin repeat-containing protein, putative
Location	chr1 : 32062270 .. 32066668 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGAGGCATGGAAGCATCGAAGAACAAATTCATTGAAGATTGGGGTTCAGCTAGGGAAAATCTCGAGCACAATTTTCGATGGACTCGCCGTAATTTTGCTCTCATCGGTATCTTCGGCATTGCTCTTCCCGTTTTGGTTTACAAGGGCATCGTCCGAGAATTCGTAATCCTTCTTTCTCTCTCTTACTTTTAATCAATGTTGATTTGTTGATTATAATCTAATTTTGTCTTTCAATTTGTTGCAACTTTTTATTTGGTTTGCGGATTTATGTGATTAGGGTTTTGGGATCTCACAAAAACGTGGGTAAAATTCGAATATAGGGATTGAAAAGAACTGGATTGGATTTGATCAATTTTTGAATTTGAATAATGAACTTTGATGTTTGTTTGATTAGTCGAGCTTGTGTTGTTTTATGTAATATGGGAAGGGAGTCGTGGGGTTTGCAAGAAATGGCTGTAGGATTTATAGAGAGTAAGTTCGTAATTCGTGGAGTGTTTTGTACATCTTGCTGGACTTGGGTTCGGATTGATGATTCTTTGGTGGGTGGAGATGGAGCCAAATGATTTTATCATGTCTGTATCAGTTCTGGTAGTTAATCAAGGTTGTTTTGTTGCGCTTATGAATTATGATCACCAAAAGTAGATTAGCCAACTGTGTAAGAATTTTTTCTGTAGAGGATTTGTTTACAAGTTGTTGGACTTTTGTTTTGAGTGATAATTGGGAGGTGGAAAGGGGAGTCAAATAATGTTTTATGTCTAATTGTCTGTATCGATTCTGGTTATTAATCGAGGTAGGTATGTATCGGTTAAATTGCTATAATATACTGAATTGGATGTATTTTGCTTGGTGATTTAAGTTTTTGGGTTTAAGTGGTTGCTTCTGATTCTAGGAATTCTCGAAAGAGTATGACTTTGCTCTGTTTAGTTGGCTAGAAATCAATTTCTAGGGAAAATGGGTTTCTATCTGTTTGACTTGGGTTAGTGTAGGAAATGTGAAACTGGTCAAAAACTATATTTCAAGGGAGTAAAAGGTGTTTTCCCTACCCTAATAGGTTGTCATATTTTCCGTTCTGCATCCCCCCTCTACCCCTCATGTTTGGGCCACACACTTTCTCTCCCTGTCATTTCGTCTCTTGTTCTGTCCACTCTTTCTTTCTACTTACATTTCTCTCAATGTCCTCTATCCCTCTCCTTTATATGCTCAAGTATAGAATATAAAACTACTCTTTTACTCATAAACAAACAACGGAAGCTATAGCAGAAAACAAGATCATGATGGAGACTTAAAAGGAGCATCTTCTCTTAATATGAAAGTCTGAGACTCAAATGCTCATGAGTGAAGTGCTTGGAGCCTTGGAAGCTTGGGTTGCAGTTATACTGGTAATTGGATGGGTGTAACTATTCTAGGATCATTTTGAATCTGATTCGTATAATGTGGTTAAGTGTCTGGTAATCTGGTTAATAGAGATTCAAGGCCTTGCGTGTGTTGGAATGACTTCAACTTCATTGGTAGTCAATTGAGTTTGATGATTTATTTTAAGGTGTAATACAGTATTAGGAAACTAAACTCTGAAAGCGATTTATTTGCTAGGAAAAGCTGTAAATGGGAAGCTTTTGTTTGTGTGCCTGATTTAATTGTAGTTTTCTTTTAGTGCTGGAAATTGTTCTGGTGTTTTCTACTGTGAGGCTCTGAACGCTACACGCAGGAAATTACCCAGATGGTTATGTTTTAAATGGGCTACAAGTATGATTGGTAAGCTGCTGTGCCGAGTTCATTGTTATAAACATTGATCAGCAAGAAAACTTCGGATCGTTTGATTCCTCCTCCTACGTTTGGGGAGATTAGTTTGCTATTACTTTTGTTTCTTAATTGTTAAGTATGTCTCCTTTGGTTTAGCATCTAGTAAATAACCATCAGTTACCATGTTGGAGCAGAATAATGAAGTACGGAGTTTCTAGTTTTCCTTACTTCCAGCAAGAAAACTTGGGATGGTTTTGATCCCTGTTAGTTCTATGGTTGAAGACCTTGCAACATCTTGCTATCTTGTGAATTCATAATTTTGAGTGACTGTTATTGTTAGTTTGTTAATGTAGCTTAGAACACTCATATTTGTCTATCATTCACAGTATTAATTACTATGTATCGTACTTTTTTTGATGCTATCATACGTGGATGAAGATTCATTCACTTTCCAAATGCAACCAAACATCACCTCTGAGTAAAAACTTTTAATAAGCATTTCTTGACTTCATGTTAATTATGATTTTGCAGCACATGCAAGACGAGGATGCTGGTAGACCGTACAGGAAATTCATATGAGTAATGCTGATATCTTGTGTAATAATGGTGTTTAGAAACAAAACTAGGTTTTGTAAGGCACCAGGATAATTGCATTTCAACATTGGATATTAATGTTTCTTGTTTTTCCCTGTAGATTTGTATTTCATCTGTTTTGGACTGAATTCAGATCATCATTGAAGATCCAAAGGTCTTGTTGCTATTGTTTTTGCTGTACTGTTTGAATGGTTGAAATTTTTCCCTGACGCGTAGTACATATCTTCTCTAATATTTATTAATATTATTTAAGGAATATTGATTGTTCATATATTTAGTACTCCCTCCGTTCCTAAATAAGTGTCACATTTCCATTTTTGGCGTTCCCTTATAAGTGTCACATTTCTATTTTTTAACATGTAATTTTTCCACTTTTTCATACACTTTTCCCACTTTTCTATAAATCATAATTACTTTTACCTACACATTCTACACTTTTCCACTTTTTAATCCCCACATACACTTTTATTTGTACTTTATTCAATTAAACAATGATCTACTTTATCCTTTCCCCCAAAAAAAAAAACATTCTCAATCATTAACTCTTACACACTTTACAATTTTATTAATTACCGTATCGGAGCCTAAATGTGACACTTATTTAGGAACGGAGGGAGTAGTATAAAATAACAATATGTGTAGCATAAAATTCACGTGTTTACTCCAACTGCAGTGAAGTGTTACGCATGACTTGGGATCTATAGGAAATCGAACTCGGTAGATAATGTCTGATTGCCTTCTCATTTATGAGCCTATTAGGCTGTGCTTTTAGGTAATAAACTAAACAAAAGATATTCACATACTAACTGCAATGAAATATCCATGAGTTTTGGCGTAATTTATGAAATGCCCATTAACTTTCAATAATACATAAAATGCCCCTAAAATAAAAATTAACACCCCAAATACCCAATTAACGTCTAATTAACCTTGTTATATGAAGTAAGGAGTAGTTGTTAAACAATGAATCGACCCATTATGTTCAAATCCATGTGATATGTGATACACAACATTTGACTCTGTACATATATATACTTCCTCTATTTTTTAATAATTACACCATCTTGGTTTTAGCACTATTCACACATTCCTATATAGTTATTTTTTTTGATTTATATGCAAGGAAAAATATATTCATGTGGGATCTTGTTAGATTCGTTTCGAAATATACTTTCAAAATTTCAAATTTTTATAATTTTTCAAAATGTATAATGAGAGATGTTAAAATAGTGCATTGACAAACGTGAAATCCCAGATAGTACAATTAAAAAAAAATGGAGGAAGTACTATTTTCAAGGAAGAGTCCTTGAAGTGCAATGAAGTCAATATTTTGGGCACGATGTAATGTGTCTCTCTTCCCACTTGACTTAGAGGCGTTGACTACAAAATTATTGTCTTGGGATCTTGGGCCTATTTTTGTACGAGTAGCTTCGTGGAGCCTGACGTTGATTACAAAATAGTTGCAGATTATGTAAGAATTAATTGGAGAGCTAAAGTCTTAAAAGAAAAACATCTATATTTCCAGTCCGTAAAGTGTAATATGGGAGGATCAGATGTGAGGCTACGCATAGCTCAGTCAAAACAAGAAAGGCTCAAGCGTCTGCAGAATTCTGAATCTGATTGGAGGCGGCCACAGAAATCGAACAAGGCCGCAACAACATCTGGATCAAGTGATCAGCCAAGTTCAGAAACTGCAGTCATCAATGGAGAAACACACCTTCCACTTGAAGATGAAGCCAATGGAAAATATATGCCAGTCAAACTGTACCGCGCAGCAGCCAATAAGGATGATGCTGATCATTTCGTCCATGTCATCGAAGAAATTGCAGCTGAAAAAAGTCTTGATTTGTCGCAGATTATTCAACAAGTTACTCCACTGGGGAATACGCTACTTCATGTAGCAGCAAGTCACGGAAATGAGGAAAGCGTGAACCTGTTGATCACCGCATCACCCTTTCTTATTGCGAAGCAGAACTTTGTAGGTGATACCGCATTTCATCTTGCAGCAAGAGCCGGGCATCAGCTTGTTATTACTACACTTCTTCATGGTGGTCTATAA

mRNA sequence

ATGGGAGGAGGCATGGAAGCATCGAAGAACAAATTCATTGAAGATTGGGGTTCAGCTAGGGAAAATCTCGAGCACAATTTTCGATGGACTCGCCGTAATTTTGCTCTCATCGGTATCTTCGGCATTGCTCTTCCCGTTTTGGTTTACAAGGGCATCGTCCGAGAATTCTCCGTAAAGTGTAATATGGGAGGATCAGATGTGAGGCTACGCATAGCTCAGTCAAAACAAGAAAGGCTCAAGCGTCTGCAGAATTCTGAATCTGATTGGAGGCGGCCACAGAAATCGAACAAGGCCGCAACAACATCTGGATCAAGTGATCAGCCAAGTTCAGAAACTGCAGTCATCAATGGAGAAACACACCTTCCACTTGAAGATGAAGCCAATGGAAAATATATGCCAGTCAAACTGTACCGCGCAGCAGCCAATAAGGATGATGCTGATCATTTCGTCCATGTCATCGAAGAAATTGCAGCTGAAAAAAGTCTTGATTTGTCGCAGATTATTCAACAAGTTACTCCACTGGGGAATACGCTACTTCATGTAGCAGCAAGTCACGGAAATGAGGAAAGCGTGAACCTGTTGATCACCGCATCACCCTTTCTTATTGCGAAGCAGAACTTTGTAGGTGATACCGCATTTCATCTTGCAGCAAGAGCCGGGCATCAGCTTGTTATTACTACACTTCTTCATGGTGGTCTATAA

Coding sequence (CDS)

ATGGGAGGAGGCATGGAAGCATCGAAGAACAAATTCATTGAAGATTGGGGTTCAGCTAGGGAAAATCTCGAGCACAATTTTCGATGGACTCGCCGTAATTTTGCTCTCATCGGTATCTTCGGCATTGCTCTTCCCGTTTTGGTTTACAAGGGCATCGTCCGAGAATTCTCCGTAAAGTGTAATATGGGAGGATCAGATGTGAGGCTACGCATAGCTCAGTCAAAACAAGAAAGGCTCAAGCGTCTGCAGAATTCTGAATCTGATTGGAGGCGGCCACAGAAATCGAACAAGGCCGCAACAACATCTGGATCAAGTGATCAGCCAAGTTCAGAAACTGCAGTCATCAATGGAGAAACACACCTTCCACTTGAAGATGAAGCCAATGGAAAATATATGCCAGTCAAACTGTACCGCGCAGCAGCCAATAAGGATGATGCTGATCATTTCGTCCATGTCATCGAAGAAATTGCAGCTGAAAAAAGTCTTGATTTGTCGCAGATTATTCAACAAGTTACTCCACTGGGGAATACGCTACTTCATGTAGCAGCAAGTCACGGAAATGAGGAAAGCGTGAACCTGTTGATCACCGCATCACCCTTTCTTATTGCGAAGCAGAACTTTGTAGGTGATACCGCATTTCATCTTGCAGCAAGAGCCGGGCATCAGCTTGTTATTACTACACTTCTTCATGGTGGTCTATAA

Protein sequence

MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKCNMGGSDVRLRIAQSKQERLKRLQNSESDWRRPQKSNKAATTSGSSDQPSSETAVINGETHLPLEDEANGKYMPVKLYRAAANKDDADHFVHVIEEIAAEKSLDLSQIIQQVTPLGNTLLHVAASHGNEESVNLLITASPFLIAKQNFVGDTAFHLAARAGHQLVITTLLHGGL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18502.1	Spo18502.1	mRNA

Homology

[Close]

BLAST of Spo18502.1 vs. NCBI nr
Match: gi|902219737|gb|KNA18397.1| (hypothetical protein SOVF_071180 [Spinacia oleracea])

HSP 1 Score: 121.7 bits (304), Expect = 1.700e-24
Identity = 58/68 (85.29%), Postives = 60/68 (88.24%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREF ++ 
Sbjct: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFHMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDAGRPYR 68

[Close]

BLAST of Spo18502.1 vs. NCBI nr
Match: gi|823143610|ref|XP_012471613.1| (PREDICTED: uncharacterized protein LOC105788991 [Gossypium raimondii])

HSP 1 Score: 118.2 bits (295), Expect = 1.900e-23
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEA+KN+FIEDWGSARENLEHNFRWTRRNFAL+GIFGIA+PVLVYKGIVREF ++ 
Sbjct: 1  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIAIPVLVYKGIVREFHMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDNGRPYR 68

[Close]

BLAST of Spo18502.1 vs. NCBI nr
Match: gi|727601887|ref|XP_010473923.1| (PREDICTED: calcium-dependent protein kinase 24-like [Camelina sativa])

HSP 1 Score: 118.2 bits (295), Expect = 1.900e-23
Identity = 52/63 (82.54%), Postives = 59/63 (93.65%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGME +KNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALP++VYKGIV++F +K 
Sbjct: 1  MGGGMETNKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHLKY 60

Query: 61 NMG 64
           +G
Sbjct: 61 ELG 63

[Close]

BLAST of Spo18502.1 vs. NCBI nr
Match: gi|596287755|ref|XP_007225826.1| (hypothetical protein PRUPE_ppa014388mg [Prunus persica])

HSP 1 Score: 116.3 bits (290), Expect = 7.100e-23
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEA+KNKFIE+WGSARENLEHNFRWTRRNFAL+GIFGIA+P+LVYKGIVR+F ++ 
Sbjct: 1  MGGGMEANKNKFIEEWGSARENLEHNFRWTRRNFALVGIFGIAIPILVYKGIVRDFHMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDAGRPYR 68

[Close]

BLAST of Spo18502.1 vs. NCBI nr
Match: gi|1000980217|ref|XP_015570992.1| (PREDICTED: uncharacterized protein LOC8285318 [Ricinus communis])

HSP 1 Score: 116.3 bits (290), Expect = 7.100e-23
Identity = 53/68 (77.94%), Postives = 60/68 (88.24%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEA+KN+FIEDWGSARENLEHNFRWTRRNFAL+GIFGIALP+LVYK IVREF+++ 
Sbjct: 1  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIALPLLVYKSIVREFNMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDAGRPYR 68

[Close]

BLAST of Spo18502.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHR8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_071180 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.200e-24
Identity = 58/68 (85.29%), Postives = 60/68 (88.24%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREF ++ 
Sbjct: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFHMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDAGRPYR 68

[Close]

BLAST of Spo18502.1 vs. UniProtKB/TrEMBL
Match: A0A0D2MNV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G145600 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.300e-23
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEA+KN+FIEDWGSARENLEHNFRWTRRNFAL+GIFGIA+PVLVYKGIVREF ++ 
Sbjct: 1  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIAIPVLVYKGIVREFHMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDNGRPYR 68

[Close]

BLAST of Spo18502.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CV71_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g035740 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.900e-23
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEASKNKFIE+WGSARENLEHNFRWTRRNFALIGIFGIA+P+ VYKGIV+EF ++ 
Sbjct: 1  MGGGMEASKNKFIEEWGSARENLEHNFRWTRRNFALIGIFGIAIPIFVYKGIVKEFHMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDAGRPYR 68

[Close]

BLAST of Spo18502.1 vs. UniProtKB/TrEMBL
Match: M5Y579_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014388mg PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.900e-23
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEA+KNKFIE+WGSARENLEHNFRWTRRNFAL+GIFGIA+P+LVYKGIVR+F ++ 
Sbjct: 1  MGGGMEANKNKFIEEWGSARENLEHNFRWTRRNFALVGIFGIAIPILVYKGIVRDFHMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDAGRPYR 68

[Close]

BLAST of Spo18502.1 vs. UniProtKB/TrEMBL
Match: V7C481_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G177400g PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.500e-23
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVKC 60
          MGGGMEA+KNKFIEDWG+ARENLEHNFRWTRRN AL+GIFGIA+PVLVYKGIVREF ++ 
Sbjct: 1  MGGGMEANKNKFIEDWGTARENLEHNFRWTRRNLALVGIFGIAIPVLVYKGIVREFHMQD 60

Query: 61 NMGGSDVR 69
             G   R
Sbjct: 61 EDNGRPYR 68

[Close]

BLAST of Spo18502.1 vs. TAIR (Arabidopsis)
Match: AT2G31490.1 (unknown protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.200e-25
Identity = 50/59 (84.75%), Postives = 57/59 (96.61%), Query Frame = 1

		  
Query: 1  MGGGMEASKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPVLVYKGIVREFSVK 60
          MGGGME +KNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALP++VYKGIV++F ++
Sbjct: 1  MGGGMETNKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHMQ 59

[Close]

BLAST of Spo18502.1 vs. TAIR (Arabidopsis)
Match: AT4G03500.1 (Ankyrin repeat family protein)

HSP 1 Score: 54.7 bits (130), Expect = 8.900e-8
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 1

		  
Query: 171 VTPLGNTLLHVAASHGNEESVNLLITASPFLIAKQNFVGDTAFHLAARAGHQLVITTLL 230
           V   GNT+LH+AAS G+   V  +I   P L+ K N +G+ A HLAA AGH  V+  L+
Sbjct: 98  VNDRGNTILHLAASSGHVSLVRYIIQKCPGLLLKSNMMGEVALHLAAEAGHLDVVWNLI 156

[Close]

BLAST of Spo18502.1 vs. TAIR (Arabidopsis)
Match: AT5G50140.1 (Ankyrin repeat family protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.800e-7
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 1

		  
Query: 164 LSQIIQQVTPLGNTLLHVAASHGNEESVNLLITASPFLIAKQNFVGDTAFHLAARAGHQL 223
           L ++ +Q    G T LH+A   GNEE V  ++   P L++  N   DT  HLAAR GH  
Sbjct: 16  LKKLEEQDESFGGTFLHLAVKLGNEELVKKIVEIHPSLVSSTNTKSDTPLHLAARLGHTS 75

Query: 224 VITTLL 230
           ++  +L
Sbjct: 76  ILLLML 81

[Close]

BLAST of Spo18502.1 vs. TAIR (Arabidopsis)
Match: AT1G34050.1 (Ankyrin repeat family protein)

HSP 1 Score: 51.2 bits (121), Expect = 9.900e-7
Identity = 24/59 (40.68%), Postives = 33/59 (55.93%), Query Frame = 1

		  
Query: 174 LGNTLLHVAASHGNEESVNLLITASPFLIAKQNFVGDTAFHLAARAGHQLVITTLLHGG 233
           LG T+LH+A   G++E V  +I   P L+   N  GDT  H AAR GH  ++  +L  G
Sbjct: 53  LGGTVLHLATELGHKEIVEAIIKLCPSLVGVTNLDGDTPLHFAARWGHATIVAQILASG 111

[Close]

BLAST of Spo18502.1 vs. TAIR (Arabidopsis)
Match: AT2G24600.3 (Ankyrin repeat family protein)

HSP 1 Score: 48.5 bits (114), Expect = 6.400e-6
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = 1

		  
Query: 143 KDDADHFVHVIEEIAAEKSLDLSQIIQQVTPLGNTLLHVAASHGNEESVNLLITASPFLI 202
           ++D   F+ ++E  A E SL+     Q      NT+LHVAA  G+ E V  +I   P L+
Sbjct: 10  QNDLPAFLGLVE--ARESSLEERSEEQNTN---NTVLHVAAKLGHRELVAKIIELRPSLL 69

Query: 203 AKQNFVGDTAFHLAARAGHQLVITTLLHGGL 234
           + +N  GDT  HLAA  G   ++  +L  GL
Sbjct: 70  SSRNAYGDTPLHLAALLGDVNIVMQMLDTGL 95

The following BLAST results are available for this feature:

BLAST of Spo18502.1 vs. NCBI nr
BLAST of Spo18502.1 vs. UniProtKB/TrEMBL
BLAST of Spo18502.1 vs. ExPASy Swiss-Prot
BLAST of Spo18502.1 vs. TAIR (Arabidopsis)

BLAST of Spo18502.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902219737\|gb\|KNA18397.1\|	1.7e-24	85.2	hypothetical protein SOVF_0711...	[more]
gi\|823143610\|ref\|XP_012471613.1\|	1.9e-23	79.4	PREDICTED: uncharacterized pro...	[more]
gi\|727601887\|ref\|XP_010473923.1\|	1.9e-23	82.5	PREDICTED: calcium-dependent p...	[more]
gi\|596287755\|ref\|XP_007225826.1\|	7.1e-23	76.4	hypothetical protein PRUPE_ppa...	[more]
gi\|1000980217\|ref\|XP_015570992.1\|	7.1e-23	77.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo18502.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RHR8_SPIOL	1.2e-24	85.2	Uncharacterized protein OS=Spi...	[more]
A0A0D2MNV8_GOSRA	1.3e-23	79.4	Uncharacterized protein OS=Gos...	[more]
A0A0J8CV71_BETVU	4.9e-23	77.9	Uncharacterized protein OS=Bet...	[more]
M5Y579_PRUPE	4.9e-23	76.4	Uncharacterized protein OS=Pru...	[more]
V7C481_PHAVU	6.5e-23	77.9	Uncharacterized protein OS=Pha...	[more]

BLAST of Spo18502.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo18502.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT2G31490.1	1.2e-25	84.7	unknown protein	[more]
AT4G03500.1	8.9e-8	45.7	Ankyrin repeat family protein	[more]
AT5G50140.1	5.8e-7	37.8	Ankyrin repeat family protein	[more]
AT1G34050.1	9.9e-7	40.6	Ankyrin repeat family protein	[more]
AT2G24600.3	6.4e-6	36.2	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PROFILE	PS50088	ANK_REPEAT	coord: 174..206 score: 8.843coord: 208..233 score: 9
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 165..231 score: 5.2
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 138..230 score: 2.
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 174..233 score: 16
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 140..232 score: 5.12
None	No IPR available	PANTHER	PTHR35479	FAMILY NOT NAMED	coord: 2..72 score: 3.2
None	No IPR available	PANTHER	PTHR35479:SF2	SUBFAMILY NOT NAMED	coord: 2..72 score: 3.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0018279	protein N-linked glycosylation via asparagine
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0007033	vacuole organization
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0016049	cell growth
biological_process	GO:0006412	translation
biological_process	GO:0001510	RNA methylation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0032955	regulation of division septum assembly
biological_process	GO:0042545	cell wall modification
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006506	GPI anchor biosynthetic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006414	translational elongation
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0006457	protein folding
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0010114	response to red light
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009116	nucleoside metabolic process
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0006526	arginine biosynthetic process
biological_process	GO:0010218	response to far red light
biological_process	GO:0009637	response to blue light
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0010304	PSII associated light-harvesting complex II catabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0042793	plastid transcription
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0015979	photosynthesis
biological_process	GO:0046500	S-adenosylmethionine metabolic process
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006168	adenine salvage
biological_process	GO:0042255	ribosome assembly
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006479	protein methylation
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006591	ornithine metabolic process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0044425	membrane part
cellular_component	GO:0045277	respiratory chain complex IV
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0034357	photosynthetic membrane
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005746	mitochondrial respiratory chain
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009348	ornithine carbamoyltransferase complex
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005795	Golgi stack
cellular_component	GO:0016020	membrane
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005835	fatty acid synthase complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009533	chloroplast stromal thylakoid
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0008250	oligosaccharyltransferase complex
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0003999	adenine phosphoribosyltransferase activity
molecular_function	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004585	ornithine carbamoyltransferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0004316	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
molecular_function	GO:0003779	actin binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0003993	acid phosphatase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01714	0.81	Barchart \| Table
Spo14678	0.81	Barchart \| Table
Spo18185	0.80	Barchart \| Table
Spo05073	0.77	Barchart \| Table
Spo24857	0.77	Barchart \| Table
Spo11317	0.76	Barchart \| Table
Spo14416	0.76	Barchart \| Table
Spo11446	0.74	Barchart \| Table
Spo25918	0.74	Barchart \| Table
Spo26117	0.73	Barchart \| Table
Spo24983	0.73	Barchart \| Table
Spo13490	0.73	Barchart \| Table
Spo06031	0.72	Barchart \| Table
Spo23652	0.72	Barchart \| Table
Spo01261	0.72	Barchart \| Table
Spo02573	0.72	Barchart \| Table
Spo11310	0.72	Barchart \| Table
Spo18171	0.72	Barchart \| Table
Spo21383	0.72	Barchart \| Table
Spo16079	0.71	Barchart \| Table
Spo01579	0.71	Barchart \| Table
Spo00898	0.71	Barchart \| Table
Spo14687	0.70	Barchart \| Table
Spo16695	0.70	Barchart \| Table
Spo27102	0.70	Barchart \| Table
Spo08197	0.70	Barchart \| Table
Spo23148	0.70	Barchart \| Table
Spo22811	0.70	Barchart \| Table
Spo12253	0.70	Barchart \| Table
Spo20869	0.70	Barchart \| Table
Spo18471	0.70	Barchart \| Table
Spo08789	0.69	Barchart \| Table
Spo08305	0.69	Barchart \| Table
Spo00079	0.69	Barchart \| Table
Spo24625	0.69	Barchart \| Table
Spo06004	0.69	Barchart \| Table
Spo17875	0.69	Barchart \| Table
Spo20686	0.69	Barchart \| Table
Spo16797	0.69	Barchart \| Table
Spo05029	0.69	Barchart \| Table
Spo10927	0.69	Barchart \| Table
Spo26407	0.69	Barchart \| Table
Spo00936	0.69	Barchart \| Table
Spo07390	0.68	Barchart \| Table
Spo03251	0.68	Barchart \| Table
Spo05431	0.68	Barchart \| Table
Spo10235	0.68	Barchart \| Table
Spo11191	0.68	Barchart \| Table
Spo12122	0.68	Barchart \| Table
Spo15517	0.68	Barchart \| Table
Spo19206	0.68	Barchart \| Table
Spo21021	0.68	Barchart \| Table
Spo25802	0.68	Barchart \| Table
Spo28058	0.68	Barchart \| Table
Spo26441	0.67	Barchart \| Table
Spo19908	0.67	Barchart \| Table
Spo00566	0.67	Barchart \| Table
Spo21046	0.67	Barchart \| Table
Spo21067	0.67	Barchart \| Table
Spo23518	0.67	Barchart \| Table
Spo09335	0.67	Barchart \| Table
Spo04653	0.67	Barchart \| Table
Spo25159	0.67	Barchart \| Table
Spo28324	0.67	Barchart \| Table
Spo02085	0.67	Barchart \| Table
Spo01129	0.67	Barchart \| Table
Spo17679	0.67	Barchart \| Table
Spo15639	0.67	Barchart \| Table
Spo13214	0.67	Barchart \| Table
Spo24046	0.66	Barchart \| Table
Spo18575	0.66	Barchart \| Table
Spo03572	0.66	Barchart \| Table
Spo03390	0.66	Barchart \| Table
Spo20521	0.66	Barchart \| Table
Spo25138	0.66	Barchart \| Table
Spo25230	0.66	Barchart \| Table
Spo12894	0.66	Barchart \| Table
Spo22583	0.66	Barchart \| Table
Spo10529	0.66	Barchart \| Table
Spo25572	0.66	Barchart \| Table
Spo13202	0.65	Barchart \| Table
Spo13029	0.65	Barchart \| Table
Spo21768	0.65	Barchart \| Table
Spo02628	0.65	Barchart \| Table
Spo25347	0.65	Barchart \| Table
Spo10537	0.65	Barchart \| Table