Spo19421 (gene) | SpinachBase

Overview


Name	Spo19421
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	17.6 kDa class II heat shock protein
Location	chr1 : 33931822 .. 33932316 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCCGGTTCACCGGCCTCGACACCCCAATCTACAACGTCCTCTCCCATTTCCTCGACGCAGACGACTTCACCGCCCCCGCCGCCACCGACAAATCAACCACTGGAGCCAACGCGCCGTCCAACGCATACGTCCGTGATGCACGTGCAATGGCTCGTACCCCTGCTGATGTGAAGGAGTACCCGAATTCGTACCAGTTCATCATCGACATGCCTGGGCTGAAGAGCGGAGACATTAAAGTGCAGGTGGAGGACGACAATGTGCTGGTGATAAGTGGAGAGAGGAAGAGGGATGAGGAGAAAGAAGGGGTCAAGTATTTGAGGATGGAGAGGAGAATTGGTAAGTTTATGAGGAAGTTTGTGTTGCCTGAAAATGCTGATATGGAGAAGATTAATGCTGTTTGTCAAGATGGTGTTTTGAGTGTTAGTGTCGAGAAGTTGCCTCCTCCTCAGCCTAAGAAGCCCAAGACCATTCAGGTTAAGGTTGCTTAA

mRNA sequence

ATGGATTTCCGGTTCACCGGCCTCGACACCCCAATCTACAACGTCCTCTCCCATTTCCTCGACGCAGACGACTTCACCGCCCCCGCCGCCACCGACAAATCAACCACTGGAGCCAACGCGCCGTCCAACGCATACGTCCGTGATGCACGTGCAATGGCTCGTACCCCTGCTGATGTGAAGGAGTACCCGAATTCGTACCAGTTCATCATCGACATGCCTGGGCTGAAGAGCGGAGACATTAAAGTGCAGGTGGAGGACGACAATGTGCTGGTGATAAGTGGAGAGAGGAAGAGGGATGAGGAGAAAGAAGGGGTCAAGTATTTGAGGATGGAGAGGAGAATTGGTAAGTTTATGAGGAAGTTTGTGTTGCCTGAAAATGCTGATATGGAGAAGATTAATGCTGTTTGTCAAGATGGTGTTTTGAGTGTTAGTGTCGAGAAGTTGCCTCCTCCTCAGCCTAAGAAGCCCAAGACCATTCAGGTTAAGGTTGCTTAA

Coding sequence (CDS)

ATGGATTTCCGGTTCACCGGCCTCGACACCCCAATCTACAACGTCCTCTCCCATTTCCTCGACGCAGACGACTTCACCGCCCCCGCCGCCACCGACAAATCAACCACTGGAGCCAACGCGCCGTCCAACGCATACGTCCGTGATGCACGTGCAATGGCTCGTACCCCTGCTGATGTGAAGGAGTACCCGAATTCGTACCAGTTCATCATCGACATGCCTGGGCTGAAGAGCGGAGACATTAAAGTGCAGGTGGAGGACGACAATGTGCTGGTGATAAGTGGAGAGAGGAAGAGGGATGAGGAGAAAGAAGGGGTCAAGTATTTGAGGATGGAGAGGAGAATTGGTAAGTTTATGAGGAAGTTTGTGTTGCCTGAAAATGCTGATATGGAGAAGATTAATGCTGTTTGTCAAGATGGTGTTTTGAGTGTTAGTGTCGAGAAGTTGCCTCCTCCTCAGCCTAAGAAGCCCAAGACCATTCAGGTTAAGGTTGCTTAA

Protein sequence

MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVKEYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRKFVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19421.1	Spo19421.1	mRNA

Homology

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BLAST of Spo19421.1 vs. NCBI nr
Match: gi|902203036|gb|KNA14461.1| (hypothetical protein SOVF_107430 [Spinacia oleracea])

HSP 1 Score: 323.9 bits (829), Expect = 1.600e-85
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK
Sbjct: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK
Sbjct: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA
Sbjct: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 164

[Close]

BLAST of Spo19421.1 vs. NCBI nr
Match: gi|731317749|ref|XP_010669352.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 269.6 bits (688), Expect = 3.500e-69
Identity = 138/165 (83.64%), Postives = 152/165 (92.12%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAP-AATDKSTTGANAPSNAYVRDARAMARTPADV 60
           MDFRFTGLDTP++N LSHFLDADD+T   A++DKS+  A APSN YVRDARAMARTPADV
Sbjct: 1   MDFRFTGLDTPLFNALSHFLDADDYTTTHASSDKSS--AAAPSNTYVRDARAMARTPADV 60

Query: 61  KEYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMR 120
           KEYP+ YQFIIDMPGLKSGDIKVQVED+NVLVISGERKR EEKE VKYL+MERRIGKFMR
Sbjct: 61  KEYPSKYQFIIDMPGLKSGDIKVQVEDENVLVISGERKRGEEKEDVKYLKMERRIGKFMR 120

Query: 121 KFVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           KFV+PENA+ME I AVCQDGVL+VSVEKLPPP+PKKPKTI+VKVA
Sbjct: 121 KFVMPENANMEAITAVCQDGVLTVSVEKLPPPEPKKPKTIEVKVA 163

[Close]

BLAST of Spo19421.1 vs. NCBI nr
Match: gi|731355273|ref|XP_010689053.1| (PREDICTED: 17.1 kDa class II heat shock protein-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 260.4 bits (664), Expect = 2.100e-66
Identity = 134/165 (81.21%), Postives = 150/165 (90.91%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAP-AATDKSTTGANAPSNAYVRDARAMARTPADV 60
           MDFRFTGLDTP++N LSHFLD+DD+T   A++DKS+  A APSN YVRDARAMARTPADV
Sbjct: 1   MDFRFTGLDTPLFNALSHFLDSDDYTTTHASSDKSS--AAAPSNTYVRDARAMARTPADV 60

Query: 61  KEYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMR 120
           KEYP+ YQFIIDM GLKSGDIKVQVED+NVLVISGERKR EEKE VKYL+MERRIGKFMR
Sbjct: 61  KEYPSKYQFIIDMLGLKSGDIKVQVEDENVLVISGERKRGEEKEDVKYLKMERRIGKFMR 120

Query: 121 KFVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           KFV+PENA+ME I+ VCQDGVL+VSVEKLPP +PKKPKTI+VKVA
Sbjct: 121 KFVMPENANMEAISVVCQDGVLTVSVEKLPPSEPKKPKTIEVKVA 163

[Close]

BLAST of Spo19421.1 vs. NCBI nr
Match: gi|743812897|ref|XP_011019383.1| (PREDICTED: 17.9 kDa class II heat shock protein-like [Populus euphratica])

HSP 1 Score: 243.8 bits (621), Expect = 2.100e-61
Identity = 124/164 (75.61%), Postives = 139/164 (84.76%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MDFR  GLD P++N L H +DA D  A    DKS    NAP+  YVRDA+AMA TPADVK
Sbjct: 1   MDFRIMGLDAPLFNTLQHMMDASDHEA----DKSF---NAPTRTYVRDAKAMASTPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           EYPNSY FIIDMPGLKSGDIKVQVEDDNVLVISGERKR EEKEG KY+RMERR+GKFMRK
Sbjct: 61  EYPNSYAFIIDMPGLKSGDIKVQVEDDNVLVISGERKRGEEKEGAKYVRMERRVGKFMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           FVLPENA+ + I+AVCQDGVL+V+VEKLPPP+PKKPKTI+VK+A
Sbjct: 121 FVLPENANTDAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKIA 157

[Close]

BLAST of Spo19421.1 vs. NCBI nr
Match: gi|697126009|ref|XP_009617035.1| (PREDICTED: 17.3 kDa class II heat shock protein [Nicotiana tomentosiformis])

HSP 1 Score: 242.3 bits (617), Expect = 6.000e-61
Identity = 118/164 (71.95%), Postives = 139/164 (84.76%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MDFR  G+DTP+++ L H +DA       A D S    NAPS  YVRDA+AMA TPADVK
Sbjct: 1   MDFRLMGIDTPLFHTLQHLMDA-------AADDSDKSVNAPSRNYVRDAKAMAATPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           EYPNSY+F++DMPGLKSGDIKVQVEDDNVL+ISGERKR+EEKEG KY+RMERRIGKFMRK
Sbjct: 61  EYPNSYEFVVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGAKYIRMERRIGKFMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           F LPENA+ + I+AVCQDGVL+V+V+KLPPP+PKKPKTI+VK+A
Sbjct: 121 FTLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKIA 157

[Close]

BLAST of Spo19421.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4N4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_107430 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.100e-85
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK
Sbjct: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK
Sbjct: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA
Sbjct: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 164

[Close]

BLAST of Spo19421.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FQ33_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g034220 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.500e-69
Identity = 138/165 (83.64%), Postives = 152/165 (92.12%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAP-AATDKSTTGANAPSNAYVRDARAMARTPADV 60
           MDFRFTGLDTP++N LSHFLDADD+T   A++DKS+  A APSN YVRDARAMARTPADV
Sbjct: 1   MDFRFTGLDTPLFNALSHFLDADDYTTTHASSDKSS--AAAPSNTYVRDARAMARTPADV 60

Query: 61  KEYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMR 120
           KEYP+ YQFIIDMPGLKSGDIKVQVED+NVLVISGERKR EEKE VKYL+MERRIGKFMR
Sbjct: 61  KEYPSKYQFIIDMPGLKSGDIKVQVEDENVLVISGERKRGEEKEDVKYLKMERRIGKFMR 120

Query: 121 KFVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           KFV+PENA+ME I AVCQDGVL+VSVEKLPPP+PKKPKTI+VKVA
Sbjct: 121 KFVMPENANMEAITAVCQDGVLTVSVEKLPPPEPKKPKTIEVKVA 163

[Close]

BLAST of Spo19421.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EHC6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g205180 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.500e-66
Identity = 134/165 (81.21%), Postives = 150/165 (90.91%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAP-AATDKSTTGANAPSNAYVRDARAMARTPADV 60
           MDFRFTGLDTP++N LSHFLD+DD+T   A++DKS+  A APSN YVRDARAMARTPADV
Sbjct: 1   MDFRFTGLDTPLFNALSHFLDSDDYTTTHASSDKSS--AAAPSNTYVRDARAMARTPADV 60

Query: 61  KEYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMR 120
           KEYP+ YQFIIDM GLKSGDIKVQVED+NVLVISGERKR EEKE VKYL+MERRIGKFMR
Sbjct: 61  KEYPSKYQFIIDMLGLKSGDIKVQVEDENVLVISGERKRGEEKEDVKYLKMERRIGKFMR 120

Query: 121 KFVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           KFV+PENA+ME I+ VCQDGVL+VSVEKLPP +PKKPKTI+VKVA
Sbjct: 121 KFVMPENANMEAISVVCQDGVLTVSVEKLPPSEPKKPKTIEVKVA 163

[Close]

BLAST of Spo19421.1 vs. UniProtKB/TrEMBL
Match: A9PA59_POPTR (Heat shock protein 17.7 OS=Populus trichocarpa GN=POPTR_0006s24030g PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 7.200e-61
Identity = 122/164 (74.39%), Postives = 139/164 (84.76%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MDFR  GLD P++N L H +DA D  A    DKS    NAP+  YVRDA+AMA TPADVK
Sbjct: 1   MDFRIMGLDAPLFNTLQHMMDASDHEA----DKSF---NAPTRTYVRDAKAMASTPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           EYP+SY F+IDMPGLKSGDIKVQVEDDNVLVISGERKR EEKEG KY+RMERR+GKFMRK
Sbjct: 61  EYPSSYAFVIDMPGLKSGDIKVQVEDDNVLVISGERKRGEEKEGAKYVRMERRVGKFMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           FVLPENA+ + I+AVCQDGVL+V+VEKLPPP+PKKPKTI+VK+A
Sbjct: 121 FVLPENANTDAISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKIA 157

[Close]

BLAST of Spo19421.1 vs. UniProtKB/TrEMBL
Match: A5AQ47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g01490 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.600e-60
Identity = 120/164 (73.17%), Postives = 141/164 (85.98%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MD R  GLD+P+++ L H LDA D      +DKS +   AP+  YVRDA+AMA TPADVK
Sbjct: 1   MDLRMIGLDSPLFSALQHMLDAAD-----DSDKSVS---APTRTYVRDAKAMAATPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           EYPNSY FIIDMPGLKSGDIKVQVEDDNVLVISGERKR+EEKEG KY++MERR+GKFMRK
Sbjct: 61  EYPNSYAFIIDMPGLKSGDIKVQVEDDNVLVISGERKREEEKEGAKYVKMERRVGKFMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           FVLPENA+ +KI+A+CQDGVL+V+VEKLPPP+PKKPKTI+VK+A
Sbjct: 121 FVLPENANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIEVKIA 156

[Close]

BLAST of Spo19421.1 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.300e-59
Identity = 117/164 (71.34%), Postives = 137/164 (83.54%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MDFR  GL++P+++ L H +D  +     A D  T   NAP+ +YVRDA+AMA TPADVK
Sbjct: 1   MDFRVMGLESPLFHTLQHMMDMSE---DGAGDNKTH--NAPTWSYVRDAKAMAATPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           EYPNSY F IDMPGLKSGDIKVQVEDDN+L+I GERKRDEEKEG KYLRMERR+GK MRK
Sbjct: 61  EYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           FVLPENA+ + I+AVCQDGVLSV+V+KLPPP+PKKP+TIQVKVA
Sbjct: 121 FVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA 159

[Close]

BLAST of Spo19421.1 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.100e-57
Identity = 113/165 (68.48%), Postives = 136/165 (82.42%), Query Frame = 1

		  
Query: 1   MDFRFTGLD-TPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADV 60
           MD R  G+D TP+++ L H ++A      A  D      NAPS  YVRDA+AMA TPADV
Sbjct: 1   MDLRLLGIDNTPLFHTLHHMMEA------AGEDS----VNAPSKIYVRDAKAMAATPADV 60

Query: 61  KEYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMR 120
           KEYPNSY F++DMPGLKSGDIKVQVE+DNVL+ISGERKR+EEKEG K++RMERR+GKFMR
Sbjct: 61  KEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMR 120

Query: 121 KFVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           KF LPENA+ + I+AVCQDGVL+V+V+KLPPP+PKKPKTI+VKVA
Sbjct: 121 KFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155

[Close]

BLAST of Spo19421.1 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.000e-57
Identity = 112/157 (71.34%), Postives = 135/157 (85.99%), Query Frame = 1

		  
Query: 8   LDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVKEYPNSYQ 67
           LD+P++N L H +D  D T    T+K+    NAP+  YVRDA+AMA TPADVKE+PNSY 
Sbjct: 3   LDSPLFNTLHHIMDLTDDT----TEKNL---NAPTRTYVRDAKAMAATPADVKEHPNSYV 62

Query: 68  FIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRKFVLPENA 127
           F++DMPG+KSGDIKVQVED+NVL+ISGERKR+EEKEGVKYL+MERRIGK MRKFVLPENA
Sbjct: 63  FMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENA 122

Query: 128 DMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           ++E I+A+ QDGVL+V+V KLPPP+PKKPKTIQVKVA
Sbjct: 123 NIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152

[Close]

BLAST of Spo19421.1 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.800e-55
Identity = 112/164 (68.29%), Postives = 132/164 (80.49%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MD R  GL+TP+   L H LD  D  A A  DK+  G   P+  YV DARAMA TPADVK
Sbjct: 1   MDGRMFGLETPLMVALQHLLDVPDGDAGAGGDKA--GGGGPTRTYVADARAMAVTPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           E P +Y F++DMPGL +GDIKVQVED+ VLVISGER+R EE+E  KYLRMERR+GKFMRK
Sbjct: 61  ELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRR-EEREDAKYLRMERRMGKFMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           FVLP+NADM+KI+AVC+DGVL+V+VEKLPPP+PKKPKTI+VKVA
Sbjct: 121 FVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 161

[Close]

BLAST of Spo19421.1 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.200e-54
Identity = 104/164 (63.41%), Postives = 129/164 (78.66%), Query Frame = 1

		  
Query: 1   MDFRFTGLDTPIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVK 60
           MD    GL+TP+   L H LD  D  A A  D  T    + +  YVRDARAMA TPADVK
Sbjct: 1   MDAVMFGLETPLMAALQHLLDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVK 60

Query: 61  EYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRMERRIGKFMRK 120
           E P +Y F++DMPGL +GDI+VQVED+ VLV+SGER+R+E ++  KYLRMERR+GKFMRK
Sbjct: 61  ELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRK 120

Query: 121 FVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           FVLP+NAD++K+ AVC+DGVL+V+VEKLPPP+PKKPKTI+VKVA
Sbjct: 121 FVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 164

[Close]

BLAST of Spo19421.1 vs. TAIR (Arabidopsis)
Match: AT5G12020.1 (17.6 kDa class II heat shock protein)

HSP 1 Score: 190.3 bits (482), Expect = 9.600e-49
Identity = 96/155 (61.94%), Postives = 123/155 (79.35%), Query Frame = 1

		  
Query: 11  PIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVKEYPNSYQFII 70
           PI ++L   L+  +         +    N PS  Y+RDA+AMA TPADV E+PN+Y F++
Sbjct: 7   PIISILEDMLEVPE------DHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVV 66

Query: 71  DMPGLKSGDIKVQVEDDNVLVISGERKRD-EEKEGVKYLRMERRIGKFMRKFVLPENADM 130
           DMPG+K  +IKVQVE+DNVLV+SGER+R+ +E EGVKY+RMERR+GKFMRKF LPENAD+
Sbjct: 67  DMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADL 126

Query: 131 EKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           +KI+AVC DGVL V+V+KLPPP+PKKPKTIQV+VA
Sbjct: 127 DKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155

[Close]

BLAST of Spo19421.1 vs. TAIR (Arabidopsis)
Match: AT5G12030.1 (heat shock protein 17.6A)

HSP 1 Score: 184.9 bits (468), Expect = 4.000e-47
Identity = 93/155 (60.00%), Postives = 126/155 (81.29%), Query Frame = 1

		  
Query: 11  PIYNVLSHFLDADDFTAPAATDKSTTGANAPSNAYVRDARAMARTPADVKEYPNSYQFII 70
           PI+++L   L+A +      T+K+    N PS AY+RDA+AMA TPADV E+P++Y F +
Sbjct: 9   PIFSILEDMLEAPE----EQTEKTR---NNPSRAYMRDAKAMAATPADVIEHPDAYVFAV 68

Query: 71  DMPGLKSGDIKVQVEDDNVLVISGERKRD-EEKEGVKYLRMERRIGKFMRKFVLPENADM 130
           DMPG+K  +I+VQ+E++NVLV+SG+R+RD +E EGVK++RMERR+GKFMRKF LP+NAD+
Sbjct: 69  DMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADL 128

Query: 131 EKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           EKI+A C DGVL V++ KLPPP+PKKPKTIQV+VA
Sbjct: 129 EKISAACNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156

[Close]

BLAST of Spo19421.1 vs. TAIR (Arabidopsis)
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.100e-23
Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = 1

		  
Query: 16  LSHFLDADDFTAPAATDKSTT--GANAPSNAYVRDARAMARTPADVKEYPNSYQFIIDMP 75
           ++HF     F  P A +K       +  SN   R   +    P D+ E P  Y F +D+P
Sbjct: 6   INHF-----FGLPEAIEKLILPISRSGESNNESRGRGSSNNIPIDILESPKEYIFYLDIP 65

Query: 76  GLKSGDIKVQVEDDNVLVI--SGERKR--DEEKEGVKYLRMERRIGK-FMRKFVLPENAD 135
           G+   DI+V VE++  LVI  +G+RKR  DE +EG KY+R+ERR+ +  ++KF LPE+AD
Sbjct: 66  GISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLERRLAQNLVKKFRLPEDAD 125

Query: 136 MEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQVKVA 165
           M  + A  Q+GVL+V ++KL PPQP KPKT+Q+ V+
Sbjct: 126 MASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of Spo19421.1 vs. TAIR (Arabidopsis)
Match: AT5G59720.1 (heat shock protein 18.2)

HSP 1 Score: 104.8 bits (260), Expect = 5.300e-23
Identity = 57/120 (47.50%), Postives = 80/120 (66.67%), Query Frame = 1

		  
Query: 36  TGANAPSNAYV-RDARAMARTPADVKEYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISG 95
           T ++A +NA   RD  A      D KE P ++ F  D+PGLK  ++KV+VED NVL ISG
Sbjct: 32  TPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISG 91

Query: 96  ERKRDEEKEGVKYLRMERRIGKFMRKFVLPENADMEKINAVCQDGVLSVSVEKLPPPQPK 155
           ER ++ E++  K+ R+ER  GKFMR+F LPENA ME++ A  ++GVL+V V K P  +P+
Sbjct: 92  ERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQ 151

[Close]

BLAST of Spo19421.1 vs. TAIR (Arabidopsis)
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.200e-22
Identity = 47/111 (42.34%), Postives = 79/111 (71.17%), Query Frame = 1

		  
Query: 51  AMARTPADVKEYPNSYQFIIDMPGLKSGDIKVQVEDDNVLVISGERKRDEEKEGVKYLRM 110
           A++    D KE    ++ ++D+PGLK  ++K++VE++ VL +SGERKR+EEK+G ++ R+
Sbjct: 67  ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRV 126

Query: 111 ERRIGKFMRKFVLPENADMEKINAVCQDGVLSVSVEKLPPPQPKKPKTIQV 162
           ER  GKF R+F LP+N DME + A  ++GVL++++ KL P + K P+ + +
Sbjct: 127 ERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNI 177

The following BLAST results are available for this feature:

BLAST of Spo19421.1 vs. NCBI nr
BLAST of Spo19421.1 vs. UniProtKB/TrEMBL
BLAST of Spo19421.1 vs. ExPASy Swiss-Prot
BLAST of Spo19421.1 vs. TAIR (Arabidopsis)

BLAST of Spo19421.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902203036\|gb\|KNA14461.1\|	1.6e-85	100.	hypothetical protein SOVF_1074...	[more]
gi\|731317749\|ref\|XP_010669352.1\|	3.5e-69	83.6	PREDICTED: 17.1 kDa class II h...	[more]
gi\|731355273\|ref\|XP_010689053.1\|	2.1e-66	81.2	PREDICTED: 17.1 kDa class II h...	[more]
gi\|743812897\|ref\|XP_011019383.1\|	2.1e-61	75.6	PREDICTED: 17.9 kDa class II h...	[more]
gi\|697126009\|ref\|XP_009617035.1\|	6.0e-61	71.9	PREDICTED: 17.3 kDa class II h...	[more]

BLAST of Spo19421.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9R4N4_SPIOL	1.1e-85	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FQ33_BETVU	2.5e-69	83.6	Uncharacterized protein OS=Bet...	[more]
A0A0J8EHC6_BETVU	1.5e-66	81.2	Uncharacterized protein OS=Bet...	[more]
A9PA59_POPTR	7.2e-61	74.3	Heat shock protein 17.7 OS=Pop...	[more]
A5AQ47_VITVI	3.6e-60	73.1	Putative uncharacterized prote...	[more]

BLAST of Spo19421.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
HSP21_SOYBN	3.3e-59	71.3	17.9 kDa class II heat shock p...	[more]
HSP21_SOLPE	3.1e-57	68.4	17.3 kDa class II heat shock p...	[more]
HSP21_PEA	9.0e-57	71.3	17.1 kDa class II heat shock p...	[more]
HSP21_MAIZE	3.8e-55	68.2	17.5 kDa class II heat shock p...	[more]
HSP22_MAIZE	4.2e-54	63.4	17.8 kDa class II heat shock p...	[more]

BLAST of Spo19421.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT5G12020.1	9.6e-49	61.9	17.6 kDa class II heat shock p...	[more]
AT5G12030.1	4.0e-47	60.0	heat shock protein 17.6A	[more]
AT1G54050.1	4.1e-23	42.3	HSP20-like chaperones superfam...	[more]
AT5G59720.1	5.3e-23	47.5	heat shock protein 18.2	[more]
AT4G10250.1	1.2e-22	42.3	HSP20-like chaperones superfam...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 58..162 score: 1.4
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 58..147 score: 23
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 32..163 score: 7.0
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 41..156 score: 1.12
None	No IPR available	PANTHER	PTHR11527:SF93	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 1..164 score: 3.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15195	0.71	Barchart \| Table
Spo08947	0.68	Barchart \| Table
Spo15173	0.68	Barchart \| Table