Spo14393 (gene)

Overview
NameSpo14393
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 35704861 .. 35705736 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCCGTTGGATTGACGATCAACGGCTATGATGTAAAGATGGGAGTTGAGGAAAGAAACGGGTGGGTATAAATCAACAGTTTAAGAAGAGAGAGAACATTTCTTTTCTTCTCTCTTGTCTCTCTGTTTGCACCATTCAAGCTTTCTCTCTCCTCTTTTTCTCATTTGCACTTCAAATTCTTCAACTTTCTGAGTTTTTTTGAATTTTTTTACAAATTGTTGGTGAAAAATGCGAAAACAGAGTTTCAATTAAAAATGAGTAGTAGCTTTCATCTGTAGTTGACGATCTTGAATGAGTTTTCTTGTTGTTTCTGGAATTTGAAGGTTTGTAGTTTTTGTTTCAATGGAGGATTTCGGAATTGAAAGAGTTAAAACCTGTAATAATCATCAAAACGATTAAAATGTCTAGAATATTTGGACGATTGAACAATTGGAAAATTGGAAGTTTTGTTTGTTAATCAATTTTAGGCTAACGAATTTATAGCATTTCTTATTAAAATCTAACTAATTATGTGTAAATTTCTTCAACTTTTACAGCTGTTTGGCTCAAAATCAATCGATTTCTTCAGTTACGTGGTTGAATTCGGAGAGAAGAACAGGTAAATTTATACGAAAGAGTGAGAGAACAACTGTGATTTCTGTTCAAATTCTGGTTGAATTTTCATCAAATCATTGTTAACCTTGTGTACATCGAATCTGCGTTTCAGCAATTCGAAAGCTCAACCATACAGAAAGAACAATACTGAAGAAAAGGAAGAAGAAACTTCAATTACTGGTACCGATCCTCGAAGTCGTCGCTTCAATTTCATCTTCCACCATTTTTGTTCAAATCAGCTCAATCTGAAGCTTCATTTTCAAATTTGCAAGCTTTGA

mRNA sequence

ATGAGAGCCGTTGGATTGACGATCAACGGCTATGATGTAAAGATGGGAGTTGAGGAAAGAAACGGGTGGTTGACGATCTTGAATGAGTTTTCTTGTTGTTTCTGGAATTTGAAGCTGTTTGGCTCAAAATCAATCGATTTCTTCAGTTACGTGGTTGAATTCGGAGAGAAGAACAGCAATTCGAAAGCTCAACCATACAGAAAGAACAATACTGAAGAAAAGGAAGAAGAAACTTCAATTACTGGTACCGATCCTCGAAGTCGTCGCTTCAATTTCATCTTCCACCATTTTTGTTCAAATCAGCTCAATCTGAAGCTTCATTTTCAAATTTGCAAGCTTTGA

Coding sequence (CDS)

ATGAGAGCCGTTGGATTGACGATCAACGGCTATGATGTAAAGATGGGAGTTGAGGAAAGAAACGGGTGGTTGACGATCTTGAATGAGTTTTCTTGTTGTTTCTGGAATTTGAAGCTGTTTGGCTCAAAATCAATCGATTTCTTCAGTTACGTGGTTGAATTCGGAGAGAAGAACAGCAATTCGAAAGCTCAACCATACAGAAAGAACAATACTGAAGAAAAGGAAGAAGAAACTTCAATTACTGGTACCGATCCTCGAAGTCGTCGCTTCAATTTCATCTTCCACCATTTTTGTTCAAATCAGCTCAATCTGAAGCTTCATTTTCAAATTTGCAAGCTTTGA

Protein sequence

MRAVGLTINGYDVKMGVEERNGWLTILNEFSCCFWNLKLFGSKSIDFFSYVVEFGEKNSNSKAQPYRKNNTEEKEEETSITGTDPRSRRFNFIFHHFCSNQLNLKLHFQICKL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14393.1Spo14393.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo14393.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14393.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14393.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14393.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009651 response to salt stress
biological_process GO:0007030 Golgi organization
biological_process GO:0007033 vacuole organization
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006486 protein glycosylation
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0006816 calcium ion transport
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain
molecular_function GO:0008553 proton-exporting ATPase activity, phosphorylative mechanism
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0005515 protein binding
molecular_function GO:0020037 heme binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016491 oxidoreductase activity
RNA-Seq Expression