Spo25572 (gene) | SpinachBase

Overview


Name	Spo25572
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	TO109-12
Location	chr1 : 36915923 .. 36916456 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCAATTTCTTCTTCACTGCCCAAAAGGCAAAGGGAAGAAGAGGATGAAGAAGTCTTTAAACGTCAAAAGTCTTACAAAGACATAATTACCCTTCTTGAAGAAGAGGAAGATGACCCAAACGAGGACTTATCTTCCTTGATCTCCACCCTTCAGGAAGAGATCTCTTCGTCTTCCTCTACCTCCTCCCCGTCTCAGCATGGGCTTGGCCCGGTTCATGACCCGGCTAATTCAGGCCCGTATGAGATTGACCAGGAGAACCCGTCGGTGGGTTCCGGGTCAGGGGAGGATGAGACGGAAAACGTCATGAGGCACCTCCTTGAAGCCTCCGACGATGAGCTGGGGTTGCCTAATACGACTACCACTACTAACAGTTTTTCGTCGGATAGTTTTGACGAGGTGGTTGACGGACAGTTTGACGGTGGAGATTTTTTCTACCCCGTCGTTGGCGGTGAAGGGCTTTGGGAGTTTGAAGACCGTGAAGCTGCTAACTATTACAGCTTGTTGCAGTCTACTGAAATTTTTATGTAG

mRNA sequence

ATGGAGTCAATTTCTTCTTCACTGCCCAAAAGGCAAAGGGAAGAAGAGGATGAAGAAGTCTTTAAACGTCAAAAGTCTTACAAAGACATAATTACCCTTCTTGAAGAAGAGGAAGATGACCCAAACGAGGACTTATCTTCCTTGATCTCCACCCTTCAGGAAGAGATCTCTTCGTCTTCCTCTACCTCCTCCCCGTCTCAGCATGGGCTTGGCCCGGTTCATGACCCGGCTAATTCAGGCCCGTATGAGATTGACCAGGAGAACCCGTCGGTGGGTTCCGGGTCAGGGGAGGATGAGACGGAAAACGTCATGAGGCACCTCCTTGAAGCCTCCGACGATGAGCTGGGGTTGCCTAATACGACTACCACTACTAACAGTTTTTCGTCGGATAGTTTTGACGAGGTGGTTGACGGACAGTTTGACGGTGGAGATTTTTTCTACCCCGTCGTTGGCGGTGAAGGGCTTTGGGAGTTTGAAGACCGTGAAGCTGCTAACTATTACAGCTTGTTGCAGTCTACTGAAATTTTTATGTAG

Coding sequence (CDS)

ATGGAGTCAATTTCTTCTTCACTGCCCAAAAGGCAAAGGGAAGAAGAGGATGAAGAAGTCTTTAAACGTCAAAAGTCTTACAAAGACATAATTACCCTTCTTGAAGAAGAGGAAGATGACCCAAACGAGGACTTATCTTCCTTGATCTCCACCCTTCAGGAAGAGATCTCTTCGTCTTCCTCTACCTCCTCCCCGTCTCAGCATGGGCTTGGCCCGGTTCATGACCCGGCTAATTCAGGCCCGTATGAGATTGACCAGGAGAACCCGTCGGTGGGTTCCGGGTCAGGGGAGGATGAGACGGAAAACGTCATGAGGCACCTCCTTGAAGCCTCCGACGATGAGCTGGGGTTGCCTAATACGACTACCACTACTAACAGTTTTTCGTCGGATAGTTTTGACGAGGTGGTTGACGGACAGTTTGACGGTGGAGATTTTTTCTACCCCGTCGTTGGCGGTGAAGGGCTTTGGGAGTTTGAAGACCGTGAAGCTGCTAACTATTACAGCTTGTTGCAGTCTACTGAAATTTTTATGTAG

Protein sequence

MESISSSLPKRQREEEDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSSSTSSPSQHGLGPVHDPANSGPYEIDQENPSVGSGSGEDETENVMRHLLEASDDELGLPNTTTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIFM

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo25572.1	Spo25572.1	mRNA

Homology

[Close]

BLAST of Spo25572.1 vs. NCBI nr
Match: gi|902208324|gb|KNA15915.1| (hypothetical protein SOVF_093890 [Spinacia oleracea])

HSP 1 Score: 337.0 bits (863), Expect = 1.900e-89
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


		  
Query: 1   MESISSSLPKRQREEEDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSS 60
           MESISSSLPKRQREEEDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSS
Sbjct: 1   MESISSSLPKRQREEEDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSS 60

Query: 61  STSSPSQHGLGPVHDPANSGPYEIDQENPSVGSGSGEDETENVMRHLLEASDDELGLPNT 120
           STSSPSQHGLGPVHDPANSGPYEIDQENPSVGSGSGEDETENVMRHLLEASDDELGLPNT
Sbjct: 61  STSSPSQHGLGPVHDPANSGPYEIDQENPSVGSGSGEDETENVMRHLLEASDDELGLPNT 120

Query: 121 TTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIFM 178
           TTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIFM
Sbjct: 121 TTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIFM 177

[Close]

BLAST of Spo25572.1 vs. NCBI nr
Match: gi|731344087|ref|XP_010683225.1| (PREDICTED: uncharacterized protein LOC104897945 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 166.4 bits (420), Expect = 4.500e-38
Identity = 117/191 (61.26%), Postives = 133/191 (69.63%), Query Frame = 1


		  
Query: 1   MESISSSLPKRQREEE---------DEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLIST 60
           ME +SS   KRQR+E          +E+VFKRQKSYKDIITLLEEEED PNEDLSSLIST
Sbjct: 1   MEEVSSL--KRQRDEISQVNTTTIIEEDVFKRQKSYKDIITLLEEEEDYPNEDLSSLIST 60

Query: 61  LQEEISSSSSTSSPSQHGLGPVHDPA-NSGPYEIDQENPSVGSGSGEDETENVMRHLLEA 120
           LQEEISSSSS SS          DPA N GP +        GSG  E+E E VMRHLLEA
Sbjct: 61  LQEEISSSSSPSSSEP-------DPARNPGPED--------GSGLEEEEREKVMRHLLEA 120

Query: 121 SDDELGLPNT--TTTTNSFSSDSFDEVV--DGQFDGGDFFYPVVGGEGLWEFEDREAANY 178
           SDDELGLP++  +  +N+ +    DEVV   G  DGGDF +P +GGEGLWEFED EAANY
Sbjct: 121 SDDELGLPSSINSEASNNTTDIFSDEVVGGGGHVDGGDFLFP-LGGEGLWEFEDHEAANY 173

[Close]

BLAST of Spo25572.1 vs. NCBI nr
Match: gi|703079688|ref|XP_010091218.1| (hypothetical protein L484_006536 [Morus notabilis])

HSP 1 Score: 111.7 bits (278), Expect = 1.300e-21
Identity = 91/187 (48.66%), Postives = 112/187 (59.89%), Query Frame = 1


		  
Query: 10  KRQREEEDE---EVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSSSTSSPS 69
           KRQRE+  E   E FKRQKSY DI++LLE EE++PNEDLSSLI+ LQ+E+SSS ++S+  
Sbjct: 9   KRQREDVVEDLGEAFKRQKSYHDILSLLESEEEEPNEDLSSLITNLQQELSSSDNSSTFD 68

Query: 70  QHGLGPVHDPAN--SGPYEIDQENPSVGSGS-------------GEDETENVMRHLLEAS 129
              L    DP N  +    + ++  S  S S              E++ E VMRHLLEAS
Sbjct: 69  HPLLQIASDPDNQTTASSTVVEDFASSSSSSFSCLSPVVLKEDEHEEDKERVMRHLLEAS 128

Query: 130 DDELGLPNTTTTTNSFSSDSFDEVVDGQFDGGD-FFYPVVGGEGLWEFEDREAANYYSLL 178
           DDELG+PN         SD      D  F+GGD F  P    EGLWE ED EAANYY+LL
Sbjct: 129 DDELGIPN--------RSDDVGVDGDDGFNGGDGFSLP----EGLWELED-EAANYYTLL 181

[Close]

BLAST of Spo25572.1 vs. NCBI nr
Match: gi|1009154286|ref|XP_015895088.1| (PREDICTED: uncharacterized protein LOC107428991 [Ziziphus jujuba])

HSP 1 Score: 105.5 bits (262), Expect = 9.500e-20
Identity = 89/195 (45.64%), Postives = 106/195 (54.36%), Query Frame = 1


		  
Query: 10  KRQREEEDEEVF----KRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSSSTSSP 69
           KRQR+E   E F    KRQKSY  I+++LE EED+P +DLSSLI+TLQ+EISS S     
Sbjct: 7   KRQRDETQMEDFEDFNKRQKSYSHILSILESEEDEPTQDLSSLITTLQQEISSDSG---- 66

Query: 70  SQHGLGPVHDPANSGPYEIDQENPSVGSGSGED-----------------------ETEN 129
                    DP      E DQENP+  S + ED                       + E 
Sbjct: 67  --------FDPLPFVSSENDQENPTKASKTVEDYASSSSSSSSSSAVLSKEDDQENDKER 126

Query: 130 VMRHLLEASDDELGLPNTTTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDRE 178
           VMRHLLEASDDELG+PN            FD   D  F+GGD F      +GLWEFED E
Sbjct: 127 VMRHLLEASDDELGIPNREIV--------FDG--DNGFNGGDGF---SFSDGLWEFED-E 174

[Close]

BLAST of Spo25572.1 vs. NCBI nr
Match: gi|823262716|ref|XP_012464112.1| (PREDICTED: uncharacterized protein LOC105783285 [Gossypium raimondii])

HSP 1 Score: 103.6 bits (257), Expect = 3.600e-19
Identity = 84/193 (43.52%), Postives = 108/193 (55.96%), Query Frame = 1


		  
Query: 9   PKRQREE------EDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSSST 68
           PKRQREE      E  E  KR KSY  I++LLE EED+P++DLS LI+TLQ+++SS S  
Sbjct: 7   PKRQREETQSSNEEHVEETKRHKSYNHILSLLEAEEDEPSQDLSPLITTLQQQLSSDSVL 66

Query: 69  SSPSQHGLGPVHDPANSGPYEIDQENPSVGSG------------SGEDETENVMRHLLEA 128
            +P      P+  PA   P + D+EN +                  +D+ E V+RHLLEA
Sbjct: 67  DAPF-----PLCQPATPSPSKPDKENATAALSLEDCTSATCSLKEDDDDKEQVIRHLLEA 126

Query: 129 SDDELGLPNTTTTTNSFSSDSFD------EVVDGQFDGGDFFYPVVGGEGLWEFEDREAA 178
           SDDELG+PN        S    D      E+  G  +GG+ F      +GLWE ED EAA
Sbjct: 127 SDDELGIPNREDGDGDGSGGGGDVGFEVFELEQGFNNGGNGFALC---DGLWELED-EAA 186

[Close]

BLAST of Spo25572.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8U7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093890 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.400e-89
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


		  
Query: 1   MESISSSLPKRQREEEDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSS 60
           MESISSSLPKRQREEEDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSS
Sbjct: 1   MESISSSLPKRQREEEDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSS 60

Query: 61  STSSPSQHGLGPVHDPANSGPYEIDQENPSVGSGSGEDETENVMRHLLEASDDELGLPNT 120
           STSSPSQHGLGPVHDPANSGPYEIDQENPSVGSGSGEDETENVMRHLLEASDDELGLPNT
Sbjct: 61  STSSPSQHGLGPVHDPANSGPYEIDQENPSVGSGSGEDETENVMRHLLEASDDELGLPNT 120

Query: 121 TTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIFM 178
           TTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIFM
Sbjct: 121 TTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIFM 177

[Close]

BLAST of Spo25572.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4G4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g154260 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.200e-38
Identity = 117/191 (61.26%), Postives = 133/191 (69.63%), Query Frame = 1


		  
Query: 1   MESISSSLPKRQREEE---------DEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLIST 60
           ME +SS   KRQR+E          +E+VFKRQKSYKDIITLLEEEED PNEDLSSLIST
Sbjct: 1   MEEVSSL--KRQRDEISQVNTTTIIEEDVFKRQKSYKDIITLLEEEEDYPNEDLSSLIST 60

Query: 61  LQEEISSSSSTSSPSQHGLGPVHDPA-NSGPYEIDQENPSVGSGSGEDETENVMRHLLEA 120
           LQEEISSSSS SS          DPA N GP +        GSG  E+E E VMRHLLEA
Sbjct: 61  LQEEISSSSSPSSSEP-------DPARNPGPED--------GSGLEEEEREKVMRHLLEA 120

Query: 121 SDDELGLPNT--TTTTNSFSSDSFDEVV--DGQFDGGDFFYPVVGGEGLWEFEDREAANY 178
           SDDELGLP++  +  +N+ +    DEVV   G  DGGDF +P +GGEGLWEFED EAANY
Sbjct: 121 SDDELGLPSSINSEASNNTTDIFSDEVVGGGGHVDGGDFLFP-LGGEGLWEFEDHEAANY 173

[Close]

BLAST of Spo25572.1 vs. UniProtKB/TrEMBL
Match: W9QMR2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006536 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.200e-22
Identity = 91/187 (48.66%), Postives = 112/187 (59.89%), Query Frame = 1


		  
Query: 10  KRQREEEDE---EVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSSSTSSPS 69
           KRQRE+  E   E FKRQKSY DI++LLE EE++PNEDLSSLI+ LQ+E+SSS ++S+  
Sbjct: 9   KRQREDVVEDLGEAFKRQKSYHDILSLLESEEEEPNEDLSSLITNLQQELSSSDNSSTFD 68

Query: 70  QHGLGPVHDPAN--SGPYEIDQENPSVGSGS-------------GEDETENVMRHLLEAS 129
              L    DP N  +    + ++  S  S S              E++ E VMRHLLEAS
Sbjct: 69  HPLLQIASDPDNQTTASSTVVEDFASSSSSSFSCLSPVVLKEDEHEEDKERVMRHLLEAS 128

Query: 130 DDELGLPNTTTTTNSFSSDSFDEVVDGQFDGGD-FFYPVVGGEGLWEFEDREAANYYSLL 178
           DDELG+PN         SD      D  F+GGD F  P    EGLWE ED EAANYY+LL
Sbjct: 129 DDELGIPN--------RSDDVGVDGDDGFNGGDGFSLP----EGLWELED-EAANYYTLL 181

[Close]

BLAST of Spo25572.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VB03_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G084000 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.500e-19
Identity = 84/193 (43.52%), Postives = 108/193 (55.96%), Query Frame = 1


		  
Query: 9   PKRQREE------EDEEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSSST 68
           PKRQREE      E  E  KR KSY  I++LLE EED+P++DLS LI+TLQ+++SS S  
Sbjct: 7   PKRQREETQSSNEEHVEETKRHKSYNHILSLLEAEEDEPSQDLSPLITTLQQQLSSDSVL 66

Query: 69  SSPSQHGLGPVHDPANSGPYEIDQENPSVGSG------------SGEDETENVMRHLLEA 128
            +P      P+  PA   P + D+EN +                  +D+ E V+RHLLEA
Sbjct: 67  DAPF-----PLCQPATPSPSKPDKENATAALSLEDCTSATCSLKEDDDDKEQVIRHLLEA 126

Query: 129 SDDELGLPNTTTTTNSFSSDSFD------EVVDGQFDGGDFFYPVVGGEGLWEFEDREAA 178
           SDDELG+PN        S    D      E+  G  +GG+ F      +GLWE ED EAA
Sbjct: 127 SDDELGIPNREDGDGDGSGGGGDVGFEVFELEQGFNNGGNGFALC---DGLWELED-EAA 186

[Close]

BLAST of Spo25572.1 vs. UniProtKB/TrEMBL
Match: A0A068TVK3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032208001 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.300e-18
Identity = 76/173 (43.93%), Postives = 102/173 (58.96%), Query Frame = 1


		  
Query: 9   PKRQREEED---EEVFKRQKSYKDIITLLEEEEDDPNEDLSSLISTLQEEISSSSSTSSP 68
           PKRQRE++    EE  KR KSY  I+++L+EEE +PN+DL  +  +LQ+E+SS+S +  P
Sbjct: 7   PKRQREDDHYQCEEDAKRHKSYNQILSILDEEEVEPNQDLLDIFQSLQQELSSASFSVDP 66

Query: 69  SQHGLGPVHDPANSG-PYEIDQENPSVGSGSGEDETENVMRHLLEASDDELGLPNTTTTT 128
            Q           SG   E +  +PS      ED+   +MRHLLEASDDELGLPN     
Sbjct: 67  LQVSASAADVDHRSGFSGESESGSPSSKEDDEEDDGVRMMRHLLEASDDELGLPNR---- 126

Query: 129 NSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIFM 178
              S    +E+  G+         +  G+GLWEFED +AANYY+LLQS E+FM
Sbjct: 127 ---SESGEEEIKSGE-------NALFLGDGLWEFED-DAANYYTLLQS-ELFM 163

[Close]

BLAST of Spo25572.1 vs. TAIR (Arabidopsis)
Match: AT1G69760.1 (unknown protein)

HSP 1 Score: 81.3 bits (199), Expect = 6.800e-16
Identity = 77/203 (37.93%), Postives = 114/203 (56.16%), Query Frame = 1


		  
Query: 3   SISSSLPKRQREEEDEEVFKRQK------------SYKDIITLLEEEEDDPNEDLSSLIS 62
           +++SSL KRQR+E+++E+ K Q+            SY  ++TLL++E ++   D++SLI+
Sbjct: 6   TVTSSL-KRQRDEQEQEIIKTQEETKRQKPSSSSSSYNQVLTLLKDEAEN---DITSLIT 65

Query: 63  TLQEEISSSSSTSSPSQHGLGPVHDPANSGPYEIDQENPSVGSG---------SGEDE-- 122
           TLQ+EIS+    ++                   + +ENPS+ S          S EDE  
Sbjct: 66  TLQQEISNEEQNAA-------------------VFEENPSLSSSCSSSSSSCTSKEDEYD 125

Query: 123 --TENVMRHLLEASDDELGLPNTTTTTNSF---SSDSFDEVVDGQFDGGDFFYPVVGGEG 178
              E VM+HLLEA+DDELG+PNT    +++    S++  + V+G F   D F       G
Sbjct: 126 GDKEKVMKHLLEATDDELGIPNTEFGGSNYEMIKSETSQDYVNG-FSLLDGF-----SVG 177

[Close]

BLAST of Spo25572.1 vs. TAIR (Arabidopsis)
Match: AT1G26920.1 (unknown protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.300e-14
Identity = 73/181 (40.33%), Postives = 97/181 (53.59%), Query Frame = 1


		  
Query: 10  KRQREEE---DEEVFKRQK--------SYKDIITLLEE--EEDDPNEDLSSLISTLQEEI 69
           KR RE+E   +EE  KRQK        SY  I+ LL +  E++  N DL+S I+ LQ+EI
Sbjct: 11  KRYREQETLVEEETNKRQKPTSSSSSASYNQILCLLNDSDEQNQHNNDLTSFINALQQEI 70

Query: 70  SSSSSTSSPSQHGLGPVHDPANSGPYEIDQENPSVGSGSGEDETENVMRHLLEASDDELG 129
           SS    +  S+     V D  +S     ++E         +D  E VM+HLLEASDDELG
Sbjct: 71  SSDDQYAVVSE--TSNVEDSFSSCVSSKEEEVE-------DDSKEKVMQHLLEASDDELG 130

Query: 130 LPNTTTTTNSFSSDSFDEVVDGQFDGGDFFYPVVGGEGLWEFEDREAANYYSLLQSTEIF 178
           +PNT      F   ++++  DG   G         G+  WE ED EAANYY+LLQS E+F
Sbjct: 131 IPNT-----DFGESNYEKANDGYVYGDSLLDGF--GDAFWELED-EAANYYTLLQS-ELF 173

The following BLAST results are available for this feature:

BLAST of Spo25572.1 vs. NCBI nr
BLAST of Spo25572.1 vs. UniProtKB/TrEMBL
BLAST of Spo25572.1 vs. ExPASy Swiss-Prot
BLAST of Spo25572.1 vs. TAIR (Arabidopsis)

BLAST of Spo25572.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902208324\|gb\|KNA15915.1\|	1.9e-89	100.	hypothetical protein SOVF_0938...	[more]
gi\|731344087\|ref\|XP_010683225.1\|	4.5e-38	61.2	PREDICTED: uncharacterized pro...	[more]
gi\|703079688\|ref\|XP_010091218.1\|	1.3e-21	48.6	hypothetical protein L484_0065...	[more]
gi\|1009154286\|ref\|XP_015895088.1\|	9.5e-20	45.6	PREDICTED: uncharacterized pro...	[more]
gi\|823262716\|ref\|XP_012464112.1\|	3.6e-19	43.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo25572.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R8U7_SPIOL	1.4e-89	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C4G4_BETVU	3.2e-38	61.2	Uncharacterized protein OS=Bet...	[more]
W9QMR2_9ROSA	9.2e-22	48.6	Uncharacterized protein OS=Mor...	[more]
A0A0D2VB03_GOSRA	2.5e-19	43.5	Uncharacterized protein OS=Gos...	[more]
A0A068TVK3_COFCA	1.3e-18	43.9	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo25572.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo25572.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G69760.1	6.8e-16	37.9	unknown protein	[more]
AT1G26920.1	1.3e-14	40.3	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006591	ornithine metabolic process
biological_process	GO:0006526	arginine biosynthetic process
biological_process	GO:0006771	riboflavin metabolic process
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009348	ornithine carbamoyltransferase complex
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004585	ornithine carbamoyltransferase activity
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003993	acid phosphatase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01322	0.70	Barchart \| Table
Spo14678	0.70	Barchart \| Table
Spo24694	0.68	Barchart \| Table
Spo05103	0.68	Barchart \| Table
Spo10235	0.67	Barchart \| Table
Spo10404	0.67	Barchart \| Table
Spo28451	0.67	Barchart \| Table
Spo04653	0.66	Barchart \| Table
Spo18502	0.66	Barchart \| Table
Spo18195	0.65	Barchart \| Table