Spo02891.1 (mRNA) | SpinachBase

Overview


Name	Spo02891.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	(Single-stranded nucleic acid binding R3H) (Single-stranded nucleic acid-binding protein R3H)
Location	SpoScf_00326 : 466905 .. 480491 (-)
Sequence length	1080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCAACTCAAGCTTCGTCGTTAATTGAATTGATGGAGAAGGAAAAGGAGGCGGCGTTGGTCAACAACAATTGCGTTTCGTTGGTCGACCCTTTTCTCGTTGAAGCTCTTCAAAACCCTCGTCATCGTTTAACTAGTTGAGTTTTTTAGGCTTGTTTTCGGTTTATTGTGATTTAAATGGCTTCAATTGGTTTAATTTTGTCTTATTTTGAATTTTGGGGGATTTTTATTGGAGGTGAACTTTCGCAGATTTGGGCTAAATTTGTTTCGATTTAATATTAATGTTGTGGTTTTATCTGTGTGTTAGTGTTGAATTATGCTTAATTTTGGCGGGTTGTTTAGTAATACCTTAGATCTGGTTGATTTGGTTCAGTAGGAAAAACAAATGTGTCATAGGTTCATGGAGATTTGTGTCTATATGATGCTATCATGCTCAAATTGTAAGGATTGTTGTTGCGTGTGAGCTGTTGTAATAAAAACGATGCTTGTAATTTTAGGCGATGAGCTACCAGACTGAAAATTGTAGGGGTACTAGCTGTGCAATAGTTCCGTGCCGTCGGTGTAGAGCTTGTTTAGACTATATGGAGTAACATACTGGTGATTTGGAATCCACTTGGCTGTAGTCTTCTTTAACCGTAACCCATTGTAGATTGTGTCTTATGCTTTAGATTTAGATCATGTTCTTCTGTAGTTGGTTATTTATTACTTTGCATAAAGGTAGTGATGGATTGTGGTAGAATTAGTTCTGCATTATTAGTCAGATTGTCGGAATCGGTGCGAGGAATGAGGTATGTGTAAATATGTATGATCTTCACCTATGGATGTTTTGGCTTAGTACAAACTGCAGAGGCTATGATTTATTTGGCCTAAAGTGGTCGCCTACCTATGTGGCTATGCCTTTAGACTTGAGTATTCTGTGTGTTCGGTGGCAGAGGGAACACGGGTATTGTAGTTATAGATACATGTTTTTCTTCGACATCCGTGTTAAAGTCCCATGCCTTTTCTTTGGGTCGAAAAAAGTCAGATAACCAATACTCGTATACTCCCGTATTCTGTATGTGTAGTGGCATATGGTATGTGAGAAATTATTTTTAGAGATTTCTTTCCCCAAATATGTATTTCCCAGTAGTTTACATGTAGAGGCACCCTTATAACTATGCAGAAAATCACTTAACTTTTTATATCTTTAAAATCTGTGATTGAATCTCGTCATGTGGTCTAAACCCTAATTAGGTTCATGATTAACTTGTTTCGTGTTTTGATGTCTCTTCTTCGATATATAAATGTAATCATCGTGTTTCAAATCTCAATGAGAGCAAAAGAATTCTATTCCTTGATTATCTTCCCGGGTAGCATTATAGTTGACATGCAACCATTTGGTATTTAAATGCTCCCCGCCAAAAAGCAGTTGGATTTTTGGATATTTAAATGTCAAATCTAATGGAAGGTAATCAAGGAATACAATGTTTTTGCTCTCATTGAGGTTTGTATTACTGTCAATTACCCGTTGAAAATTTTGATGATAATTTACTGGTGGAGCATACTCTCTCAGATTTTCTTGGTGTCTTTTGTATTATTTGTGTAGTGTAGATTTGTAAAGGTCTGAAGATGTGATGAAGTGAATAGAGGCTTTAGTTTCTGTGCGAATGGTCATGAGTTTATTAGTTAGTTTCCAAAGAAGGTCCTAACAATTTGAATATCAGGCCAGATGAATCAAGCTTTTACTAGATGAATTTTCCATGTTTCAGATCCCCTGATGGCTACATTCTTTGTCAAGTTGGAAAGAACTATCCTCATGTCTCAAATATCATGTCGTTTGAACAATTATTTCCTTGATACTTTGGTTGCATCTCTACGAGTTGTTATTTTTGTTGGATGCAACTTCACAAATCTAAAAAAGAATTGTGTAATGGATAATCATATTGGTAACTGGTAAGGGTGTTACAAGAATAGGTTCATCAAATAAGGTGGCAAGGTCAGGATTGTTGATTCAACCCTACTATAGTCTAGAGGGATGCATGATAATGGTGGAAGTCTGTGGATTTAATAAATATGTGCGTAATTGTTGTGTTGGGAAGCATGCCTTTACTGTAGAGAGAGGCGTAATTCATGGAGGCAAAATTACCTAAAATTGGGGGAGAATTTTCATGTGAGTTATTGGTATTCCCTTATAACTGTCTACCTTTTAGGCTTCTTGTGAATCAGTGGAGAATTGTGCTTATCCAATAAGCTATAATTTTTCCGTTTAAAACTATGCTTGTGTAAGGCATTCTTTTCTGTAAATAAGTTCCCATATGACAATTATAATGAGATGATGTTGTGGGATTTGATTCCGTATTTTCTCGTTATCGTGATAAGGTATTTACAAGTTTAAGTATGACGTGCTTCATTTTGTCGTTAGTCATCATCAATTGCACATTTTTCAGCCCAATGCTTTTATTCGCCTACTATTTCATCTGACCAAACAACTTTGCTTGTATCTTTGGTTTTTTAGTATTGCATTCGTCTTGAGCTGTGAGGGTAAAGTAAATGGGCTTTGTAAACAAAGTTTGGACATCCACGATCATCTGTGTCTAACACACCAAAATATGTTTTAGATTTGGGTTCTCAACTTAATACTCGTATAATCTCTTGTTGTTTTGTCTTTGCTGCTATCTCCCTGTGAGGTTCCATGGAGGGTGGGCCAGAGGCTGAGGGATAAAAGGGGGAGAGGTTGATCACATGCCCCCCTTTATCTGTCTATATATATGTACTTATGTTGCCATGTACTTGTACTCTTTGATTGCATGGGTTTTTATCATAATTTCAGTGGCAGATGAACATGCCTTAACATAATAGCAATATTCTTCCCCCTTTCGTATTTTTTGGTTGAAAGGATGGGGTGGGGGGTCAGTGGGTGGGGTGTCCTCTTGTTTGACACTTACAGCGTATCGGTGGAACTCGCCCATGAAGTGTGGTTGAAAACTGCAACCTGTCAGTATGTCTTGAAAGGGAGATGAAAGATAACTGGATGAATAGTTTCTTCCCATTGGAGCCAGTAGTTCCATTAAGTGCGATTTCATTCTGCTGATATTGACACTTTGTCTGCAACAGCTTGTTCCTGAATAAAAGCATAAATTGCAGTGACTAAGGTTTCACTATGATACAGAATTAGTGCAGGATGAAGTCTTAAGTTACAATACGATTAATTGTTTCCTTTAATTTGCTAACTTTCGACTTCAGGACATCCCAGAACACCATAATTCTTGTTCATATACTTACAGGTTGCTTTTGTTATTTATAGTAATTATCTTTTCTAGAGGCCCCTTCCTGATGTTAAAATCTTATTAGGCGTGGGAATGAAAGTAAGCCCTTGTGGCGAACATGCACTGATTGTTGGGTCACTGTATTTGTTCTATGATTTTGTTTGTGCACTTGCATTGTGTTTTTTTGTTGAATCTGATTTCTTTATACACCTGTGGGAAGTTGGGGTGATGTTGGTGTCATGTCACTCATGTGAGATAGTGTACCCTTTTTTATGATTATTTTTTATATCTATTTTTAGTTTTACTTAAAAGGGTTGCTCGATGAATAATTATTTTCTTTATTTGTTTATTACTGGTAAAAAATGAGTTCCCCTGTTTCATTCTCATCTTAGTTCGTTTCAAGAGTATTAGTATGTGTTCTCTGATCGGTGAATATCCCTTGGGGGTCCAAAGTCCAAAGACTCCAACGTCATACATCTGATATTGTTTGAAATTAGATTTTGAATTCCTTTCATAAAATCTTAGTCCTTTTTATTTCTAGGCATGCCTCATACGGTGCTTCTACTCAATTACAACTCCTGACTGGTGTCCTGTCTTTTCTCTTACGAATTTGGCGTGTTATGTTATTTCACATGATTTACTTTCATGGATGGCTGACATTTGCCAATCCCAAATGTGCTGATTATTGAAGAAGTGCATAATTGTGGGCCCGTTGACCCCTGGAGCCTAGATCTGTTCATGGTCTGTTTACTCTTTTCTGATTTTGCTGGGCTGATATCTTGAAGAGCCAGTCCTGATCCAAATAACCATTGACAAACGTTTGTTTAAAATCAGAATATTGAATTAGTCTTTCTGTGCCCAGAGAATCTCAAGGAATATGTCCTTGACTGCATTCCAGGGTTGTTGCAGATCTTAGGATTACCAAGCTGACATCTCTTACTTGATGCCTTTTCTCCAAGCTTTAAAGCTAGTGAATTTTCTCGCCCTCTGCTCCTTTGTCCTTTTTTATTAATTTCCTTTCTTTCTTGGTTTATAAGAGAGGGTGTAGCTTGTGATTAAGTTCCTGAATGTACATGATATGTATTATTTTTGCGTGACCTCCTTGATCTGACTGAATGACAGGTTTTATTTATTTATTATATTGTTTCAGTTCTGCGAATGGAGCTCGATATTCAGAAATTCTTGCAGAATCCTGATCAAGTGCAGTTTGAGTTCCAACATTTTCCTACTTCCTATTTACGGCTTGCAGCACACAGGGTTGCTCAACATTATGGTCTGCAGACTATGGTGTTGGACACTCTCATTGATGGGGCAGGAACCAAAATTATGGTTATAAAAACAGCTGAGAGCAAGTACCCATCTGTTTGTTTATCAGACATACCTAGGCAGTCAGATAGCAACAAACATGATCAGGTCAAAATAGCTATCAGGCGTAGGCCTAGTGGAACATCTTCTGGTGATGCAGGAGACGGTCTTAAACAGAACTCTGTACGGAGTGTAGAGGAGAGGAAAGAGGAATATGATAAGGCAAGAGCTCGGATCTTTAGCAGCCCAAACAGTCCTGTGTCAGATGATGCAATGTCTCAGGTCTCAGCAGATGGAAAAGGTTTGTATCCCAGCAAGGATGAAAGCCAAAACTTTGTTAATGATTTGGATAAGAACATCAGTGTCAGGGATGTAGGAAATTCTTCTCGTGTTGCTGCCATCTTCAAAGATAGAGAAAAAGATAGATATGATCCAGACTATGACCGTAGTTATGACAGGTACATATCTGTGCTGGTTTGTGATGCATCCTTACTTTAATCTCTCTTTTAAGTACCGGTTTTACTTGAGGGATGGTATTTTGTTGGCTTTGTACTGATACTACTCCTAGGGAGCATGAAAGCAGAGGTAACTCTTTCATCATAGTGTATTCTGAATGCTGGATGATAAAATAAAAAATTAGTATGAGATCCTCGCTGCTGCAATTAGTTATTTTTGGTTAAATAAATCCCGTAAGCTGAAAGCATCCTTTTCTTTGATAATGATCTTCTTATGTGCTATTCTTGTCCTTGTCCTCTCTAACGGACTCTATATTGTTCTCTCGGCTGAACATAGAGAAGGTAATTGAGTTGAACTTGTTAATGACTTTTGCTTTGATTGTTCTTGTCGTGCAAAATCCAACCGAACTTAATATTGGTGAAGGTATGCGATTGCCCTGGATTTTTGTTTGTTGGGCAATTATCTGGTAAATATTGGCTTAAATTATCGAGTATCTATGTGAACAACTGAACATACTCGACCAGATTGATTTTTATGGCCCCTTTATGTTTTGCTGTTTTGGTTATGTGTCATGCATATTTGTCAATTTATAATGCTTGGTATGTTCCCTTGCAAATATTTATGTGGAGATACCCCTTAACACACTTGTATGGCCATTGGTGAAAGAAGTTTTACACTAAATACACCTTTAAAGTGTGTCCTTTGTCTACTGTTGCCATATTGATGATGCTATTGTGTTATAAGCATACGAGAAGTTAATTTCATTAGTACTTCATATATCAGTGAATGGCCATATGAACGTGACAAGGGTTTTGTAAATGTTTGTATTGGAGTTAATTTGTCATATTTTGACATTTGCAGGTATGTTAAGAGCTTTCCTACAGGGCAGAGGTTTATGCCTCCTTTCAACATGCCCAAGTTTCAGCCAGCGTTTGTGCAGTATGATGCGGGTTTTCATCAGATGAGTCAGATTCCCAGAACACAAACTGCCCTCAACTATGGTCCTCCATCAGACCCAAGCATGAATCATTATTGTGCCATTGGATTGAATCAAACTTCCAGAGATGCGGTATATATGCAGTGGCCTAGTCCTGCTATGATGTACGCACACTCATATGATCAATTCAGGCATTCTGTTTTCCAGGTAGGCTGCAGTTCAGAAACTCAGTTCTTTTAATGGCCATTTTCCCAGTCATCAGTTTTAAAATAGTTTACCTGGAAGTTACAGAGATTATTTTGGATAACTCCACTTGTGTGCGCCATATTATGGATTTATCTATCATACAATAATTTGAACACATCAATTGAAATAAAACTACTCCGTATTAAGTATATCTGGACATCTGGTTGTCCTAAACTCCTAATTAAGAGTCCAGACGGCACACAATGACTGTTGGTCAGTTATTATTTATGCTTGTGCATTCGAATTACAGACTATAGTCTTAGCATATGTTTATGTGTATACAAATACTTGATAGGAAGAACCAAGCTAAGTTGGCCTAGTGAAAAGGAGAGCACCTTCCAACCTCAAGGTTGGGGTTCTGTCCCAGTAGTGCACTTCGTCTTACAAACCTGAAAAGCAAGACAATCAACCAATTATATGTGTCTCTCAATCAATGCTTCTAGGGATTAGGTTAATACTTACTCCATACATAAAATTAGACTTGTTAATCCAACCCTACGGATCAACCAGATATCTGATGTTATGTTTGGCTTTGTTTCAGGCTCCTTTCTGTCAGCAGCCTCTCAGCTTCGACTACTCACAAAACCTTTGACAATCCATGCTGGTTGATGCATCCTGTTTTCGTTAGGTCTATATCTTACTACTTACTACTTACTAGGCTCTGTGATTTAAGGTCATTTGTTGAATTATATGTGGAGAAATTTAGTGTGTGTGCTACTTATATTTCTTTAAAGAATAGGACCTTTTGTAGTTACTTTCAGTTGATACCTGGTGACTGAGCCATTTCTTAGTCTATGTCAAAAGACTCAAAACTCTGTTAGATCAACTATAATTCGTTCTTCATTCTCCTCGTCCTACACTTGTGTTACTTTCTGCCGTGCAGTGAATCTTTATGATATTCTATAATGTAATGATTTATTCTGTTTAACCAAACTACTCTTCGTACCTCTCTCAGTAGCCTAATCGTAGTTTGAGGGCTCCATTAAATTTATGGGCTGAACTCTAGTTAACTTTAGGCATCGATCTCTCATTCTCTCTGTCCAAGTGACATAAAAAATCAAGGTGTTAATTTAGGTGAAAAAAAAGTTGTTGAAATATAGGCATGCTTGTGATATTGGACATAATGACATTACCATAAAAGTCCCAACAACTTTTTGCTAAAGATTCCATTTGGCAAAAAAAGCTTTAGCATTTGATGGAGTAAATGGTAAAATATGGCCATGAGTCTCTATTCTTCTTGGAGATCTCAAATTGTACCCTTAAGATTAAGGGTAAGTAACTAAGTATGGTCAAACCTCCCCAAAAGTTAAGCCTATATTTTGAAGTGACAAACACTTGATGCCAAAAACTTTAAAAAATTTCACATGGGAAAGAACTTGTAAAGGAAAGGTAGGACATCAAAATGCACCACAAATTTATCCAGATTCTGTCTTATTTCATGTTTTTATTTTCTACTCTTTAACTTTTCTCCCTGTAAGGGCCCTACTGAATCATAGGCAAGTCAGTCCAACTACGTAACGTCCAACTACGCAACATAACGTTCGATAGCAGATTGATGGTAAAGGAATTCCTACCCCAAACACAAGTAGATGGTGAGGTTTCAGGTTTGAACTTGTATCTCCAAGTTACAAGAAGAGTTTATCACCAGTCTAAGATGATTATAGTAACGTTTGACTAAGGTGGAATAGATTAGAATATGAGACTTACCAACTACCGTACACAAGCTTTCAATTTTTACCATAAGATCAAGACCTCATTGGCTCATACTCAATGTAGTACGACTAATGTTGTTTTAAAAGATTTAGATGGAATACTCAAATCCAAATGGAGGGAATAATGTATGAGAAAGGTAAAGGTTACTTGTGTAGTACTAAATTATGGGCTAATTATTTGTTTAGAAGTGATTCGCCAGGTTGTCCTTTTTATTAATACCCCTCATAAACGCCAAAATAGAGATTACATTATTCCTTATCCCATTACTTAGTTTATTACTAACTTTTGTATTGGTAAGTGGAGGTTTCGTGCGTCTCAATTTCTGAGCTGTCAAACCAAACTTATTTATGAATACAACTGACAAACTAGGCATGCCCTGAAATACCCGACTCGTATTCAAAACGGGATGACCAAAAACTAACCCGATCTGAAATAGACCCATCTCAAACCCATAACAAAGTATCCGAAATGGTCCGGCCTGAATGAACACGACATCAATTAAATCCGACATAATAAGTTATTTTTCAATAAACATAAAAATGACCCAACATACTATATCCGAACCAAATTCTCCTACCCAAAATTAACTCATACCGGACCTGAGAATACTCAGTAACCCAATGGGCCCGAACGATACCCGACTAAATGACCTGTTTCCTAGGTATATTTATGAACCCTCCTTTTTCACAAGAATTTTGTATCTCAATTTCATAACTATTAGGACATTCTCTTTCCTTTAATAAATAAGTTCCACGTCTAATAATTAAGGGGTATTTTTTTATAAGGAGCTTACTATTTACCGCCCCATATTATTCAAAACCGCCCTAATATTTTACCCATATATCCCCTTTATTTACCCCCTCATTTTAGCATTTACCATTATCCTTTACCTTTTCCCTTTTTACCGCCCACCCTAAACATAATGTGAAATAATTTTTACATGGCCGAGACTACCGGTGGAACATCAAATTCACAAGAGGACTTTTTTTCGGAAAAAAATATTCAGAAACTTATGCATTTCTAGTTTGTACCATGGTACAGACTTATGAAGTTTAAGCCTGTACCATGGTACAGACTTATGAGTTTTGAGCTCCGACCATGGTATAGACTTATGTAGTTTAAGCTCGTACCATGGAAGGAGCTTAAACTTCATAAGTGTATACCATGGTCGGAGCTCAAAACTCATAAGTCTATACTATTTAATGTTTTGATTTGTTGTTGAATTTGATGTAATTTGTTTCGGAGAAAAGATTAAGACACTTATGCATCTTAAGCTTGTACCATGGTACAGACTTATGAATTTTAAGCTCGTACCATGGCAGGAGCTTAAAATGCATAAGTCTATGCCATGGTGTGAGCTTAAAATGCATAAGTCTATGCCATGGTGTGAGCTTAAAATGCATAAGTCTCTACCATGGTGTAAACTTAAAATGCATAAGTTTGTGGAATCAAAATTAAATTAGTATTTTTTTAATTTATTGATTAATGTACTTATTGACAAATAAAATTGCTTGGTTTAAATAATTTTTTTTATGGGTGTATGGTGGTGGTTTGGATGAAGATACTTTCTCTCTTCAAAATAGATGGGGTAATTAATTTGGGAGAAAAGTTTCATTTTATAAGGATATTAAAGTAAAATAATAGGGCGGTTTTGAGTAATGTGAGGCGGCTTTTAGCGCTCCACTTTTATAATCAGGTTTAATTCGGTTCAATCAGATTTTCGCTTCAATAAATCCCGATAAGTTCAAGTCTCACCTAGTTACGTCCTAACATAGACAATGAATTATATATGCATGCATTGATTAAGATTTACCTTATTGTACTACAGTACCACTCTAACTGCTTTCGAAAAAAAACCATAATTAATCTCTTACCCGTAGCTCGTATTTTCTACCTCATTTACTTCCTCCTTTCGTAGAAGAGTTGTAGCAACAAAAATCAAGGAATCGAGAAATGGAAAATGGTTCAAATTTTTGGCTTTTAGATAGGAAAGAGAAAATTGTTGAATATTGATACTATTAAACACCAAGACACCTAGTATTTGAGGAACTAAAAATCACGATCTGTTATGTTTTTACAAAAACATAACAGTAAAAAAATTCAATGAAATGGTATATTTTTTAATCGAAATGGTACTTTGTTTTTAATGAAATAGTACTTTTTTTAACGAAATGGTACATGTTTTTATCGAAATGGTACTCTGTTTAATGAAATTGTACTCTTTTTTTAATGAATGATACTCTTTTTTAAAAGAAATGATGCATGTTTGGCGTTGTGATGTGTTTACTCACACATCACAACATGCCCATCTCCACCCTCCCTAGTACTTAGGTTTGAACAATGCCTCGTGTTATACTTAGATAACAATTCATGTTATATCATGATACATGGGGTTTATGGTTGAATATTTTTTACAAAATATTTTTTACACAATAGTTTTAAAGAGAACATGTAGTAATGACATAATTCATTGAATAAGTTTTTAATGATGTATGTAAAAATACATATAAAAATACAAATACAAATGTATCAGACAATCAAGTACTCGTAAAGCTCTTCATAAAATCAAAAGGTCACTTTAATTAATTAATTAAGTAAAGAGATAATAGAAAATGAAGGGAAATTAAATATAATATTAAGATTATTTTCGTGGAACCTTCTTTTCACTAGTTGATCAGATTTGATCCAGTGAATCCTAACCCTTGGAGATTAGTTGATGATTAAGATATCTTGGAACATAATAAGAGTAGTACACTTTCTGTTAATTAATATATAATTTGTGGGGCCAACATTGTCCATTTGTTCCATAATCATCCAATGGTTTTATTATTAAAAAAAACTAATAATATGGAACATATATATGCTTTGCAATTAGAATGGTTGGTGGATTTTGATCATCAGACAATGTGGATGGGAGTTGTGAACTTGGACATATGATGCCAAATTAGATTTTCCAAATGACCTGGAACCTTTATTTAATTTTTATTAACAAATAATTTATTATATATAGAAATAATTTTAATCAATGTTTACTCGCTTTTAATAACACATTTTATTTACCTTTTAACGTTATAAATTAATTTTTGACGGGTAAATAACTAAATATTTTGAAGGTTATAAGTACCTTTATATATTTTGAGTAATTTTTAAAGGAGTAACTTTTATTAAAGAAAATAAACTTATCACTATAACATAGACATACAAATATTATATCAGAATAACTTTAAGCATTTTGAGCTAAATTTACACTCGTCTTACAATATTATTGTACACCCGTTTTAATTAATTATTATTTTGTGTTGTGATGTTGTCATAAAGTATACTTCATCCATTCTATATTAACCGTTATATTCACATACTTCTATCTGATCACTAATTATGATGAAAATATGAAAGAAAAATAATAGTTATGTGAATCTAGACTCGACTCGATATATAATTTTGATATATGAACTTATTTTTAATCTCATCCCTATTAATCGCTAAATTTGAACTTTACAATACTCACATATACTTATCTTTGACCGTATGATTTGGACACGCAAGAAAAAACATAGTCAACGTAAAATATTTTAAATTCATCTCGATATATAATTGAAGATATCCTTAATTAAAGTTATGGGTTAGTAGACGTGATAGTGTCACATGTTGTGATTGTAATTAATATGAAGCGATTGAAGTATATAGTTCATCATTCATGACCAACAAGGTTTATGTATAATTGTATAAACTAGTATTTGGCTCGGACGATGTGCGCCCCAGATTATTACGTGAATAAAAATTAATTATTATTTAGGATTTTTTTAATTAATTATTTCTTCTGGTAGAAAGATATATGTAACATTACATTTAGTATTTTTTTTTAGTACAAAGTAGTATGTGTTGTGGAAAACTAGTTTTATTACCACTAAATTTAGATTGAGTCAACTAATTTGGATCTTATAGACTTAAAAATTTACCTCACCAATCAGAACTGTCAAGGTTTTCCAAAGGAGAATTATGCTGAAATAATGATTTTCTCATATTTATGTAATTAATGTAATGTGACTTGTGAGTTGTGTTGACTGTTGAAGAAATGATCATATATCATACTTCGTATATGGTTGGAAAGATGATATTTACAAGTATTATAGATTGTCCCTTTCTTTTATAGTTTAATTATGTTTTCAATCTTATGATACGGCTTTGACTATTGATGGTGATGAATATCGGCCAGTGTGTTCATATCTTAGTTGCTATAAAAATGTTATGAATAATTAAAAATGAAAAGAGAAGTGGAATTGAAACGTTACTAGGTTAGATTCTGTCACACGTATATTAATAAAAAAAAACTATTTATTTTTCGTTATATGCTAATACGTTAAAAGAATTCTTAACTAAAATAAAATAATGTTTTATCAAGTATTAATGGGAAAAACCTTCAAAAAAAAGTATTAATGGGAAGGATAAATTGTTTTTTACCACCTAAAAAAATCAAAAAATTATTTTTTACCACCTAAAAAACTAAAATTTGTATTTACCACATAAAAAAATTTAAAAATTATTTTTTACCACCTGAAAAGTAGGAAAATAGATGAAAATGTTACGTTGGGGGGCACAATAACGGTAATATTTCATATATGTACATTTCTTCCACTATTTCATGTAATTAACTCTCTTCTCTTTCCCCGCTTTCTTATTTTCCATGAATTCACATAATTTTTCACCATTATTAATTCATAAAATTAACAAAATTTTAATGAAAATAAAGAGAGAAGGGTGAAAGAGTTAAAGAAATTCATAAAGGGAGTGTAAAAAATTGGAGAGAAATTGAATTAGGTAGCCACACATAAAGGTTGCATCTACTTTTTTTGTTTTTAGGTGGTAAAAAACAAGTTTTAATTATTTGTTAGGTGGTAAAATACAAGTTTTAATTATTTTTTAGGTGGTAAAAAATAATTTTTCGATTTTTATAGGTGGTAAAAAACAATTTGTCCTAATGGAAAAAAGAAAGAAATTTACCATTTATTCTTATATGACTTTTAGTTAGATATTGAGGCTTAATTATATTAAATTTTATATGTATAATCTATTAATAATTTGCTTAATGTAATTGATTTTTATTCGTAATCTATGTGATTGTTTCTTAATGTAGATTATTTTTATTCAATTATTTTTATTCTTTCCATATAAGTATTTTCAAATATTTTTTAATTAAAGAAAAAAAAAATCTTATGATGCACCAGGAGATGACATGTGTCATTCCTAATGTCCTTTTAATATATTGTAATTGATTATACTGAAAGAAGTAGAGTGGCATGTTGCCTCGCAAATTAAGATGCAATTAAACATGAAGTAATAAATTTCTAGTAATATTGAATATCTTTTGAAAGATCTTTAGTGAGAGTTACTAATTAACTGCCTTTATTCTGTTGGGGTGCGCCCTTCACTAAATCCAAAATATTGAATTGCGTATTATTTTTAATACACTCTTTATATTTAGAATATTATTGTTATTTTTAAGAATTAAACAAAATTCAAATATGAACATTATACTACGGAGTACGTATAAAGATAGTGAGATATTTTCCAATTTTAAAGAGAATCGTTAGTTAATTTGCTCTCATTTAATGTTTTCATTTGATATAGTTACAACAACAACATCATGAAAGACATGGTACAAATCATCTTATTGTTGCATAA

mRNA sequence

ATGGAATCAACTCAAGCTTCGTCGTTAATTGAATTGATGGAGAAGGAAAAGGAGGCGGCGTTGGTCAACAACAATTGCGTTTCGTTGGTCGACCCTTTTCTCGTTGAAGCTCTTCAAAACCCTCGTCATCTTCTGCGAATGGAGCTCGATATTCAGAAATTCTTGCAGAATCCTGATCAAGTGCAGTTTGAGTTCCAACATTTTCCTACTTCCTATTTACGGCTTGCAGCACACAGGGTTGCTCAACATTATGGTCTGCAGACTATGGTGTTGGACACTCTCATTGATGGGGCAGGAACCAAAATTATGGTTATAAAAACAGCTGAGAGCAAGTACCCATCTGTTTGTTTATCAGACATACCTAGGCAGTCAGATAGCAACAAACATGATCAGGTCAAAATAGCTATCAGGCGTAGGCCTAGTGGAACATCTTCTGGTGATGCAGGAGACGGTCTTAAACAGAACTCTGTACGGAGTGTAGAGGAGAGGAAAGAGGAATATGATAAGGCAAGAGCTCGGATCTTTAGCAGCCCAAACAGTCCTGTGTCAGATGATGCAATGTCTCAGGTCTCAGCAGATGGAAAAGGTTTGTATCCCAGCAAGGATGAAAGCCAAAACTTTGTTAATGATTTGGATAAGAACATCAGTGTCAGGGATGTAGGAAATTCTTCTCGTGTTGCTGCCATCTTCAAAGATAGAGAAAAAGATAGATATGATCCAGACTATGACCGTAGTTATGACAGGTATGTTAAGAGCTTTCCTACAGGGCAGAGGTTTATGCCTCCTTTCAACATGCCCAAGTTTCAGCCAGCGTTTGTGCAGTATGATGCGGGTTTTCATCAGATGAGTCAGATTCCCAGAACACAAACTGCCCTCAACTATGGTCCTCCATCAGACCCAAGCATGAATCATTATTGTGCCATTGGATTGAATCAAACTTCCAGAGATGCGGTATATATGCAGTGGCCTAGTCCTGCTATGATGTACGCACACTCATATGATCAATTCAGGCATTCTGTTTTCCAGTTACAACAACAACATCATGAAAGACATGGTACAAATCATCTTATTGTTGCATAA

Coding sequence (CDS)

ATGGAATCAACTCAAGCTTCGTCGTTAATTGAATTGATGGAGAAGGAAAAGGAGGCGGCGTTGGTCAACAACAATTGCGTTTCGTTGGTCGACCCTTTTCTCGTTGAAGCTCTTCAAAACCCTCGTCATCTTCTGCGAATGGAGCTCGATATTCAGAAATTCTTGCAGAATCCTGATCAAGTGCAGTTTGAGTTCCAACATTTTCCTACTTCCTATTTACGGCTTGCAGCACACAGGGTTGCTCAACATTATGGTCTGCAGACTATGGTGTTGGACACTCTCATTGATGGGGCAGGAACCAAAATTATGGTTATAAAAACAGCTGAGAGCAAGTACCCATCTGTTTGTTTATCAGACATACCTAGGCAGTCAGATAGCAACAAACATGATCAGGTCAAAATAGCTATCAGGCGTAGGCCTAGTGGAACATCTTCTGGTGATGCAGGAGACGGTCTTAAACAGAACTCTGTACGGAGTGTAGAGGAGAGGAAAGAGGAATATGATAAGGCAAGAGCTCGGATCTTTAGCAGCCCAAACAGTCCTGTGTCAGATGATGCAATGTCTCAGGTCTCAGCAGATGGAAAAGGTTTGTATCCCAGCAAGGATGAAAGCCAAAACTTTGTTAATGATTTGGATAAGAACATCAGTGTCAGGGATGTAGGAAATTCTTCTCGTGTTGCTGCCATCTTCAAAGATAGAGAAAAAGATAGATATGATCCAGACTATGACCGTAGTTATGACAGGTATGTTAAGAGCTTTCCTACAGGGCAGAGGTTTATGCCTCCTTTCAACATGCCCAAGTTTCAGCCAGCGTTTGTGCAGTATGATGCGGGTTTTCATCAGATGAGTCAGATTCCCAGAACACAAACTGCCCTCAACTATGGTCCTCCATCAGACCCAAGCATGAATCATTATTGTGCCATTGGATTGAATCAAACTTCCAGAGATGCGGTATATATGCAGTGGCCTAGTCCTGCTATGATGTACGCACACTCATATGATCAATTCAGGCATTCTGTTTTCCAGTTACAACAACAACATCATGAAAGACATGGTACAAATCATCTTATTGTTGCATAA

Protein sequence

MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRHLLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIPRQSDSNKHDQVKIAIRRRPSGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSADGKGLYPSKDESQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPPSDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQLQQQHHERHGTNHLIVA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo02891	Spo02891	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo02891.1	Spo02891.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02891.1.CDS.4	Spo02891.1.CDS.4	CDS
Spo02891.1.CDS.3	Spo02891.1.CDS.3	CDS
Spo02891.1.CDS.2	Spo02891.1.CDS.2	CDS
Spo02891.1.CDS.1	Spo02891.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02891.1.exon.4	Spo02891.1.exon.4	exon
Spo02891.1.exon.3	Spo02891.1.exon.3	exon
Spo02891.1.exon.2	Spo02891.1.exon.2	exon
Spo02891.1.exon.1	Spo02891.1.exon.1	exon

Homology

[Close]

BLAST of Spo02891.1 vs. NCBI nr
Match: gi|902101800|gb|KNA03546.1| (hypothetical protein SOVF_208140 [Spinacia oleracea])

HSP 1 Score: 674.5 bits (1739), Expect = 1.000e-190
Identity = 341/345 (98.84%), Postives = 342/345 (99.13%), Query Frame = 1

		  
Query: 1   MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRH---LLRMELDIQKFLQN 60
           MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRH   +LRMELDIQKFLQN
Sbjct: 1   MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRHRLTILRMELDIQKFLQN 60

Query: 61  PDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCL 120
           PDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCL
Sbjct: 61  PDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCL 120

Query: 121 SDIPRQSDSNKHDQVKIAIRRRPSGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSS 180
           SDIPRQSDSNKHDQVKIAIRRRPSGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSS
Sbjct: 121 SDIPRQSDSNKHDQVKIAIRRRPSGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSS 180

Query: 181 PNSPVSDDAMSQVSADGKGLYPSKDESQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDR 240
           PNSPVSDDAMSQVSADGKGLYPSKDESQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDR
Sbjct: 181 PNSPVSDDAMSQVSADGKGLYPSKDESQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDR 240

Query: 241 YDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPP 300
           YDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPP
Sbjct: 241 YDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPP 300

Query: 301 SDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQ 343
           SDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQ
Sbjct: 301 SDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQ 345

[Close]

BLAST of Spo02891.1 vs. NCBI nr
Match: gi|731324634|ref|XP_010673076.1| (PREDICTED: uncharacterized protein LOC104889530 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 505.8 bits (1301), Expect = 6.400e-140
Identity = 276/351 (78.63%), Postives = 301/351 (85.75%), Query Frame = 1

		  
Query: 1   MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRH---LLRMELDIQKFLQN 60
           MESTQ SS I L +KEKEA +  NN  SLVDPFLVEALQNPRH   +LRMELDIQKFLQ 
Sbjct: 1   MESTQVSS-IGLNDKEKEALV--NNYASLVDPFLVEALQNPRHRLTILRMELDIQKFLQT 60

Query: 61  PDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCL 120
           P+Q+QFEFQHFPTSYLRLAAHRVAQHYGLQTMVLD L DGAG KIMV+KTAESKYPSVCL
Sbjct: 61  PEQLQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDNLTDGAGAKIMVMKTAESKYPSVCL 120

Query: 121 SDIP-RQSDSNKHDQVKIAIRRRPSGTSSGDAGD-GLKQNSVRSVEERKEEYDKARARIF 180
           SDIP RQS+++K + VKIAIRRRP  TSSGD  D GLK+NSVRSVEERKEEYDKARARIF
Sbjct: 121 SDIPARQSENSKQELVKIAIRRRPCRTSSGDGTDMGLKRNSVRSVEERKEEYDKARARIF 180

Query: 181 SSPNSPVSDDAMSQVSADGKGLYPSKDES---QNFVNDLDKNISVRDVGNSSRVAAIFKD 240
           SSPNSP +D+ M QV  + +GL PSK+E+    NF+ND +KNI VRDVG SSRVAAIFKD
Sbjct: 181 SSPNSPTADETMPQVLVENRGLCPSKEENGGCYNFINDPEKNIIVRDVGTSSRVAAIFKD 240

Query: 241 REKDRYDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDA-GFHQMSQIPRTQTA 300
           REKDR DPDYDRSY RYVKSFPTGQRF+PPF+MPKFQP FVQYDA  F QM QIPR QT+
Sbjct: 241 REKDRSDPDYDRSYVRYVKSFPTGQRFLPPFSMPKFQPPFVQYDASAFPQMGQIPRAQTS 300

Query: 301 LNYGPPSDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQ 343
           LNYG PSDPSM+ Y A+GLNQ SRDAVYMQWPSPAMMYAHSY+QFRHSVFQ
Sbjct: 301 LNYG-PSDPSMSPY-AMGLNQASRDAVYMQWPSPAMMYAHSYEQFRHSVFQ 346

[Close]

BLAST of Spo02891.1 vs. NCBI nr
Match: gi|225440145|ref|XP_002283240.1| (PREDICTED: R3H domain-containing protein 2 [Vitis vinifera])

HSP 1 Score: 405.2 bits (1040), Expect = 1.200e-109
Identity = 214/324 (66.05%), Postives = 262/324 (80.86%), Query Frame = 1

		  
Query: 28  SLVDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHY 87
           S+VDPFLVEALQNPRH   +LRMELDIQ+FLQNPDQ QFEFQHFPTSYLRLAAHRVA HY
Sbjct: 19  SMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRLAAHRVALHY 78

Query: 88  GLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIP-RQSDSNKHDQVKIAIRRRPSGT 147
           GLQTMV D  +DG   +I+V+KTAES+ P++CLS+IP +QS++ K + +KIAIRRRP+ T
Sbjct: 79  GLQTMVQDNSVDGLANRIVVMKTAESRCPAICLSEIPAKQSENEKPEHIKIAIRRRPNKT 138

Query: 148 SSGDAGD-GLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSADGKGLYPSKD 207
           S  +  + G+K++SVR+VEERKEEYDKARARIFS+P SP SDD + Q  ADGK L  + D
Sbjct: 139 SLNETNETGIKRSSVRTVEERKEEYDKARARIFSTPASPDSDDTLPQAPADGKNLCLNGD 198

Query: 208 ESQ---NFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDRYVKSFPTGQRF 267
           E++   N + D +KNIS+RD G SSRV AIF+DREKDR DPDYDRSY+RYV++ PT Q F
Sbjct: 199 ENEGCRNSMADPEKNISIRDSGTSSRV-AIFRDREKDRTDPDYDRSYERYVRNLPTNQSF 258

Query: 268 -MPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPPSDPSMNHYCAIGLNQTSRDAV 327
            + PF+  K Q  F+QYD GF Q+ QI RTQ +L+Y  PS+P MN +CA+GLNQTSRDAV
Sbjct: 259 SLAPFDAQKIQHPFLQYDTGFPQLGQIQRTQASLSY-RPSNPIMNPFCAMGLNQTSRDAV 318

Query: 328 YMQWPSPAMMYAHSYDQFRHSVFQ 343
           Y+QWPS +MMYAHSY+QFRH+VFQ
Sbjct: 319 YLQWPSHSMMYAHSYEQFRHAVFQ 340

[Close]

BLAST of Spo02891.1 vs. NCBI nr
Match: gi|703155041|ref|XP_010111099.1| (R3H domain-containing protein 1 [Morus notabilis])

HSP 1 Score: 394.0 bits (1011), Expect = 2.700e-106
Identity = 214/346 (61.85%), Postives = 259/346 (74.86%), Query Frame = 1

		  
Query: 28  SLVDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHY 87
           S+VDPFLVEALQNPRH   +LRMELDIQ+FL N DQ QFEFQHFPTSYLRLAAHRVAQHY
Sbjct: 18  SMVDPFLVEALQNPRHRLTILRMELDIQRFLHNSDQQQFEFQHFPTSYLRLAAHRVAQHY 77

Query: 88  GLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIP-RQSDSNKHDQVKIAIRRRPSGT 147
           GLQTMV D+  DG G KI+V KTAES+YPSV LS+IP +Q + +K + VK+ IR RP+  
Sbjct: 78  GLQTMVQDSGFDGQGNKILVRKTAESRYPSVRLSEIPAKQLEYDKPENVKLVIRPRPNKA 137

Query: 148 SSGDAGD-GLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSADGKGLYPSKD 207
           S  +A   G K+NS RSVEERKEEYD+ARARIFSSPNSP S+D++S+ S D K +  S D
Sbjct: 138 SVNEANRVGNKRNSFRSVEERKEEYDRARARIFSSPNSPDSNDSLSEASMDVKTVGSSLD 197

Query: 208 E---SQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDR----------- 267
           E   S+N++ DL+KN+ ++D+ +SSRVA IF+DREKDR DPDYDRSY+R           
Sbjct: 198 ENESSRNYIIDLEKNLGIKDISSSSRVA-IFRDREKDRTDPDYDRSYERRNRASRRFAFY 257

Query: 268 -----------YVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPP 327
                      YV++FP  Q F+P FNM K QP FVQYD  F Q+ Q+P TQT+L+YGPP
Sbjct: 258 EMRRKPQGAEAYVRNFPANQNFVPHFNMQKIQPTFVQYDPVFPQIGQMPGTQTSLSYGPP 317

Query: 328 SDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQL 344
           S P MN +CA+GLNQTSRDA YMQW + AMMYAHSY+Q RH+ FQ+
Sbjct: 318 SSPVMNPFCAMGLNQTSRDAAYMQWSTAAMMYAHSYEQSRHAGFQV 362

[Close]

BLAST of Spo02891.1 vs. NCBI nr
Match: gi|567875841|ref|XP_006430510.1| (hypothetical protein CICLE_v10012047mg [Citrus clementina])

HSP 1 Score: 392.5 bits (1007), Expect = 7.900e-106
Identity = 216/350 (61.71%), Postives = 265/350 (75.71%), Query Frame = 1

		  
Query: 19  AALVNNNCVSLVDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRL 78
           AA + N   S+VDPFLVEALQNPRH   +LRMELD+Q+FLQNPDQ  FEFQHFPTSYLRL
Sbjct: 10  AAAIVNERESMVDPFLVEALQNPRHRLTILRMELDVQRFLQNPDQQHFEFQHFPTSYLRL 69

Query: 79  AAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIP--RQSDSNKHDQVK 138
           AAHRV+QHYGL TMV +  I+G G +I+V KTAESKYP+V LS+IP  +  +S+K +++K
Sbjct: 70  AAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIK 129

Query: 139 IAIRRRP-SGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSA 198
           IAIRRRP +G  +G    G K++ VRSVEERKEEYD+ARARIFS P+SP S+D ++QVS 
Sbjct: 130 IAIRRRPNAGCVNGANETGTKRSPVRSVEERKEEYDRARARIFSGPSSPNSEDTLTQVST 189

Query: 199 DGKGLYPSKDESQ---NFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDRY 258
           D K +  ++DE +   N + D +K IS+RD   SSRV AIF+DREKDR DPDYDRSY+RY
Sbjct: 190 DMKNIGFNRDEREIVRNSITDAEKIISIRDGAGSSRV-AIFRDREKDRTDPDYDRSYERY 249

Query: 259 VKSFPTGQRF-MPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPPSDPSMNHYCAI 318
           V+S PT Q F +PPFNM K Q  F+QYD GF Q SQIPRTQ +L++ PPS P M+ YCA+
Sbjct: 250 VRSLPTNQGFSLPPFNMQKVQLPFMQYDTGFPQFSQIPRTQASLSFRPPSSPVMSPYCAV 309

Query: 319 GLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQL---QQQHHERHGTNH 356
           G NQTS +A YMQWPS AMMYAHSY+QFR + FQ+   QQ     +  NH
Sbjct: 310 GPNQTSVEAAYMQWPSAAMMYAHSYEQFRQAAFQVPFCQQPLSFDYSQNH 358

[Close]

BLAST of Spo02891.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAJ5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_208140 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 7.300e-191
Identity = 341/345 (98.84%), Postives = 342/345 (99.13%), Query Frame = 1

		  
Query: 1   MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRH---LLRMELDIQKFLQN 60
           MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRH   +LRMELDIQKFLQN
Sbjct: 1   MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRHRLTILRMELDIQKFLQN 60

Query: 61  PDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCL 120
           PDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCL
Sbjct: 61  PDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCL 120

Query: 121 SDIPRQSDSNKHDQVKIAIRRRPSGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSS 180
           SDIPRQSDSNKHDQVKIAIRRRPSGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSS
Sbjct: 121 SDIPRQSDSNKHDQVKIAIRRRPSGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSS 180

Query: 181 PNSPVSDDAMSQVSADGKGLYPSKDESQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDR 240
           PNSPVSDDAMSQVSADGKGLYPSKDESQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDR
Sbjct: 181 PNSPVSDDAMSQVSADGKGLYPSKDESQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDR 240

Query: 241 YDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPP 300
           YDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPP
Sbjct: 241 YDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPP 300

Query: 301 SDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQ 343
           SDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQ
Sbjct: 301 SDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQ 345

[Close]

BLAST of Spo02891.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CN97_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063400 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 4.500e-140
Identity = 276/351 (78.63%), Postives = 301/351 (85.75%), Query Frame = 1

		  
Query: 1   MESTQASSLIELMEKEKEAALVNNNCVSLVDPFLVEALQNPRH---LLRMELDIQKFLQN 60
           MESTQ SS I L +KEKEA +  NN  SLVDPFLVEALQNPRH   +LRMELDIQKFLQ 
Sbjct: 1   MESTQVSS-IGLNDKEKEALV--NNYASLVDPFLVEALQNPRHRLTILRMELDIQKFLQT 60

Query: 61  PDQVQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCL 120
           P+Q+QFEFQHFPTSYLRLAAHRVAQHYGLQTMVLD L DGAG KIMV+KTAESKYPSVCL
Sbjct: 61  PEQLQFEFQHFPTSYLRLAAHRVAQHYGLQTMVLDNLTDGAGAKIMVMKTAESKYPSVCL 120

Query: 121 SDIP-RQSDSNKHDQVKIAIRRRPSGTSSGDAGD-GLKQNSVRSVEERKEEYDKARARIF 180
           SDIP RQS+++K + VKIAIRRRP  TSSGD  D GLK+NSVRSVEERKEEYDKARARIF
Sbjct: 121 SDIPARQSENSKQELVKIAIRRRPCRTSSGDGTDMGLKRNSVRSVEERKEEYDKARARIF 180

Query: 181 SSPNSPVSDDAMSQVSADGKGLYPSKDES---QNFVNDLDKNISVRDVGNSSRVAAIFKD 240
           SSPNSP +D+ M QV  + +GL PSK+E+    NF+ND +KNI VRDVG SSRVAAIFKD
Sbjct: 181 SSPNSPTADETMPQVLVENRGLCPSKEENGGCYNFINDPEKNIIVRDVGTSSRVAAIFKD 240

Query: 241 REKDRYDPDYDRSYDRYVKSFPTGQRFMPPFNMPKFQPAFVQYDA-GFHQMSQIPRTQTA 300
           REKDR DPDYDRSY RYVKSFPTGQRF+PPF+MPKFQP FVQYDA  F QM QIPR QT+
Sbjct: 241 REKDRSDPDYDRSYVRYVKSFPTGQRFLPPFSMPKFQPPFVQYDASAFPQMGQIPRAQTS 300

Query: 301 LNYGPPSDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQ 343
           LNYG PSDPSM+ Y A+GLNQ SRDAVYMQWPSPAMMYAHSY+QFRHSVFQ
Sbjct: 301 LNYG-PSDPSMSPY-AMGLNQASRDAVYMQWPSPAMMYAHSYEQFRHSVFQ 346

[Close]

BLAST of Spo02891.1 vs. UniProtKB/TrEMBL
Match: A5AMT9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00890 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 8.200e-110
Identity = 214/324 (66.05%), Postives = 262/324 (80.86%), Query Frame = 1

		  
Query: 28  SLVDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHY 87
           S+VDPFLVEALQNPRH   +LRMELDIQ+FLQNPDQ QFEFQHFPTSYLRLAAHRVA HY
Sbjct: 19  SMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRLAAHRVALHY 78

Query: 88  GLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIP-RQSDSNKHDQVKIAIRRRPSGT 147
           GLQTMV D  +DG   +I+V+KTAES+ P++CLS+IP +QS++ K + +KIAIRRRP+ T
Sbjct: 79  GLQTMVQDNSVDGLANRIVVMKTAESRCPAICLSEIPAKQSENEKPEHIKIAIRRRPNKT 138

Query: 148 SSGDAGD-GLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSADGKGLYPSKD 207
           S  +  + G+K++SVR+VEERKEEYDKARARIFS+P SP SDD + Q  ADGK L  + D
Sbjct: 139 SLNETNETGIKRSSVRTVEERKEEYDKARARIFSTPASPDSDDTLPQAPADGKNLCLNGD 198

Query: 208 ESQ---NFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDRYVKSFPTGQRF 267
           E++   N + D +KNIS+RD G SSRV AIF+DREKDR DPDYDRSY+RYV++ PT Q F
Sbjct: 199 ENEGCRNSMADPEKNISIRDSGTSSRV-AIFRDREKDRTDPDYDRSYERYVRNLPTNQSF 258

Query: 268 -MPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPPSDPSMNHYCAIGLNQTSRDAV 327
            + PF+  K Q  F+QYD GF Q+ QI RTQ +L+Y  PS+P MN +CA+GLNQTSRDAV
Sbjct: 259 SLAPFDAQKIQHPFLQYDTGFPQLGQIQRTQASLSY-RPSNPIMNPFCAMGLNQTSRDAV 318

Query: 328 YMQWPSPAMMYAHSYDQFRHSVFQ 343
           Y+QWPS +MMYAHSY+QFRH+VFQ
Sbjct: 319 YLQWPSHSMMYAHSYEQFRHAVFQ 340

[Close]

BLAST of Spo02891.1 vs. UniProtKB/TrEMBL
Match: W9SHI2_9ROSA (R3H domain-containing protein 1 OS=Morus notabilis GN=L484_002650 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.900e-106
Identity = 214/346 (61.85%), Postives = 259/346 (74.86%), Query Frame = 1

		  
Query: 28  SLVDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHY 87
           S+VDPFLVEALQNPRH   +LRMELDIQ+FL N DQ QFEFQHFPTSYLRLAAHRVAQHY
Sbjct: 18  SMVDPFLVEALQNPRHRLTILRMELDIQRFLHNSDQQQFEFQHFPTSYLRLAAHRVAQHY 77

Query: 88  GLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIP-RQSDSNKHDQVKIAIRRRPSGT 147
           GLQTMV D+  DG G KI+V KTAES+YPSV LS+IP +Q + +K + VK+ IR RP+  
Sbjct: 78  GLQTMVQDSGFDGQGNKILVRKTAESRYPSVRLSEIPAKQLEYDKPENVKLVIRPRPNKA 137

Query: 148 SSGDAGD-GLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSADGKGLYPSKD 207
           S  +A   G K+NS RSVEERKEEYD+ARARIFSSPNSP S+D++S+ S D K +  S D
Sbjct: 138 SVNEANRVGNKRNSFRSVEERKEEYDRARARIFSSPNSPDSNDSLSEASMDVKTVGSSLD 197

Query: 208 E---SQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDR----------- 267
           E   S+N++ DL+KN+ ++D+ +SSRVA IF+DREKDR DPDYDRSY+R           
Sbjct: 198 ENESSRNYIIDLEKNLGIKDISSSSRVA-IFRDREKDRTDPDYDRSYERRNRASRRFAFY 257

Query: 268 -----------YVKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPP 327
                      YV++FP  Q F+P FNM K QP FVQYD  F Q+ Q+P TQT+L+YGPP
Sbjct: 258 EMRRKPQGAEAYVRNFPANQNFVPHFNMQKIQPTFVQYDPVFPQIGQMPGTQTSLSYGPP 317

Query: 328 SDPSMNHYCAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQL 344
           S P MN +CA+GLNQTSRDA YMQW + AMMYAHSY+Q RH+ FQ+
Sbjct: 318 SSPVMNPFCAMGLNQTSRDAAYMQWSTAAMMYAHSYEQSRHAGFQV 362

[Close]

BLAST of Spo02891.1 vs. UniProtKB/TrEMBL
Match: V4SXI9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012047mg PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 5.500e-106
Identity = 216/350 (61.71%), Postives = 265/350 (75.71%), Query Frame = 1

		  
Query: 19  AALVNNNCVSLVDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRL 78
           AA + N   S+VDPFLVEALQNPRH   +LRMELD+Q+FLQNPDQ  FEFQHFPTSYLRL
Sbjct: 10  AAAIVNERESMVDPFLVEALQNPRHRLTILRMELDVQRFLQNPDQQHFEFQHFPTSYLRL 69

Query: 79  AAHRVAQHYGLQTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIP--RQSDSNKHDQVK 138
           AAHRV+QHYGL TMV +  I+G G +I+V KTAESKYP+V LS+IP  +  +S+K +++K
Sbjct: 70  AAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIK 129

Query: 139 IAIRRRP-SGTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSA 198
           IAIRRRP +G  +G    G K++ VRSVEERKEEYD+ARARIFS P+SP S+D ++QVS 
Sbjct: 130 IAIRRRPNAGCVNGANETGTKRSPVRSVEERKEEYDRARARIFSGPSSPNSEDTLTQVST 189

Query: 199 DGKGLYPSKDESQ---NFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDRY 258
           D K +  ++DE +   N + D +K IS+RD   SSRV AIF+DREKDR DPDYDRSY+RY
Sbjct: 190 DMKNIGFNRDEREIVRNSITDAEKIISIRDGAGSSRV-AIFRDREKDRTDPDYDRSYERY 249

Query: 259 VKSFPTGQRF-MPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPPSDPSMNHYCAI 318
           V+S PT Q F +PPFNM K Q  F+QYD GF Q SQIPRTQ +L++ PPS P M+ YCA+
Sbjct: 250 VRSLPTNQGFSLPPFNMQKVQLPFMQYDTGFPQFSQIPRTQASLSFRPPSSPVMSPYCAV 309

Query: 319 GLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQL---QQQHHERHGTNH 356
           G NQTS +A YMQWPS AMMYAHSY+QFR + FQ+   QQ     +  NH
Sbjct: 310 GPNQTSVEAAYMQWPSAAMMYAHSYEQFRQAAFQVPFCQQPLSFDYSQNH 358

[Close]

BLAST of Spo02891.1 vs. ExPASy Swiss-Prot
Match: R3HD1_HUMAN (R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 58.9 bits (141), Expect = 1.300e-7
Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 1

		  
Query: 33  FLVEALQN-PRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHYGLQT 92
           FLV  L+N PR    LL++E +I  F+ N +  + +F    TSY R+  HRVA ++GL  
Sbjct: 156 FLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVAAYFGL-- 215

Query: 93  MVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIPRQSDSNKHDQVKIAIRRRPSGTSSGDA 152
              D  +D +G  ++V KT+ ++ P    ++  +  D  +  Q +  ++R  S     D 
Sbjct: 216 ---DHNVDQSGKSVIVNKTSNTRIPDQKFNEHIKD-DKGEDFQKRYILKRDNSSFDKDDN 275

Query: 153 GDGLK---QNSVRSVEERKEEYDKARARIFS 177
              ++       +S+EER+EEY +AR RIFS
Sbjct: 276 QMRIRLKDDRRSKSIEEREEEYQRARDRIFS 299

[Close]

BLAST of Spo02891.1 vs. ExPASy Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 6.400e-7
Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = 1

		  
Query: 33  FLVEALQ-NPRH---LLRMELDIQKFLQNPDQVQFEFQHFP--TSYLRLAAHRVAQHYGL 92
           FLV  L+ NPR    LL++E +I  F+ + +    +F+ FP  TSY R+  HRVA ++G+
Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNN---QFKKFPQMTSYHRMLLHRVAAYFGM 216

Query: 93  QTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIPRQSDSNKHDQVKIAIRRRPSGTSSG 152
                D  +D  G  +++ KT+ ++ P    S+  +  + N   Q +  ++R  +     
Sbjct: 217 -----DHNVDQTGKAVIINKTSSTRIPEQRFSEHIKD-EKNTEFQQRFILKRDDASMDRD 276

Query: 153 D------AGDGLKQNSVRSVEERKEEYDKARARIFS 177
           D        DG +    +S+EER+EEY + R RIF+
Sbjct: 277 DNQMRVPLQDGRRS---KSIEEREEEYQRVRERIFA 300

[Close]

BLAST of Spo02891.1 vs. ExPASy Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.900e-6
Identity = 53/198 (26.77%), Postives = 97/198 (48.99%), Query Frame = 1

		  
Query: 33  FLVEALQ-NPRH---LLRMELDIQKFLQNPDQVQFEFQHFP--TSYLRLAAHRVAQHYGL 92
           FLV  L+ NPR    LL++E +I  F+ + +    +F+ FP  TSY R+  HRVA ++G+
Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNN---QFKKFPQMTSYHRMLLHRVAAYFGM 216

Query: 93  QTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIPRQSDSNKHDQVKIAIRRRPSGTSSG 152
                D  +D  G  +++ KT+ ++ P    S+  +  + N   Q +  ++R  +     
Sbjct: 217 -----DHNVDQTGKAVIINKTSNTRIPEQRFSEHIKD-EKNTEFQQRFILKRDDASMDRD 276

Query: 153 D------AGDGLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSADGKGLYPS 212
           D        DG +    +S+EER+EEY + R RIF+       +  ++ +  + +GL  +
Sbjct: 277 DNQIRVPLQDGRRS---KSIEEREEEYQRVRERIFARETG--QNGYLNDIRGNREGLSRT 336

Query: 213 KDESQNFVNDLDKNISVR 219
               Q+  +   K++  R
Sbjct: 337 SSSRQSSTDSELKSLEPR 340

[Close]

BLAST of Spo02891.1 vs. TAIR (Arabidopsis)
Match: AT3G56680.1 (Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.600e-77
Identity = 166/325 (51.08%), Postives = 216/325 (66.46%), Query Frame = 1

		  
Query: 30  VDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHYGL 89
           VDPFLVEAL N RH   +LRMELD+Q+ LQNP+Q QFEFQHFPTSYLRLAAHRVA HYGL
Sbjct: 24  VDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQHFPTSYLRLAAHRVANHYGL 83

Query: 90  QTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIP--RQSDSNKHDQVKIAIRRRPSGTS 149
            T V ++  DG   +I+V KT ESK+P+V LS+IP  +QS++ K +  K++I+ RPS  S
Sbjct: 84  ATAVQESGADGNENRILVTKTTESKFPAVRLSEIPVAKQSENGKFESRKVSIKTRPSKGS 143

Query: 150 SGDAGDGLK-QNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSADGKGLYPSKDE 209
              AGD  K +  +RSVEERKEEYDKAR RIFS       DD+ S+     +    S+D+
Sbjct: 144 GYGAGDLEKNRGPLRSVEERKEEYDKARERIFSGLTGLSCDDSSSETQVYERNASLSRDD 203

Query: 210 ---SQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDRYVKSFPTGQRF- 269
              S+N   ++ KN+S+R+ G +SRV AIF+DREKDR+DPDYDR + RY++S P  Q F 
Sbjct: 204 KQVSKNAYVEVKKNLSIRESGPTSRV-AIFRDREKDRFDPDYDRRHQRYIRSLPVNQNFN 263

Query: 270 MPPFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPPSDPSMNHYCAIGLNQTSRDAVY 329
           +PPFN+ +    +  Y+ GF   +QIP     L +GP     M+ Y       T+ DA+Y
Sbjct: 264 LPPFNIQQIPTPY--YEMGFTGYNQIPSPPAPLGFGPHPSSIMSPY------GTTMDAMY 323

Query: 330 MQWPSPAMMYAHSYDQFRHSVFQLQ 345
           M WP+ AMMYAH Y+QFR+   Q Q
Sbjct: 324 MHWPNAAMMYAHPYEQFRNGSLQAQ 339

[Close]

BLAST of Spo02891.1 vs. TAIR (Arabidopsis)
Match: AT3G10770.1 (Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 267.3 bits (682), Expect = 1.400e-71
Identity = 166/323 (51.39%), Postives = 213/323 (65.94%), Query Frame = 1

		  
Query: 28  SLVDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHY 87
           ++VDPFLVEALQNPRH   +LRMELDIQKF QNP+Q+QFEF  FPTSYLRLAAHRVAQHY
Sbjct: 9   AMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQHY 68

Query: 88  GLQTMVLDT---LIDGAGTKIMVIKTAESKYPSVCLSDIP-RQSDSNKHDQVKIAIRRRP 147
           GL TM LD      DG+  +I+V KTAES++P VCLS+IP +Q ++ + +  KIAI+ RP
Sbjct: 69  GLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIKPRP 128

Query: 148 S-GTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMS--QVSADGKGL 207
             G+  G +G G++QN +RSVEERKEEYDKARARIF+SP+S  S+D+ S    S + +  
Sbjct: 129 KRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPPSLEVRNT 188

Query: 208 YPSKDESQNFVNDLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYD--------RY 267
             +++E++  VN+   +   RD G +SRV AI +DREKDRYDPDYDRSYD        RY
Sbjct: 189 CINRNETEVAVNNSPVDAVTRDSGRTSRV-AIIRDREKDRYDPDYDRSYDRYVVDPAYRY 248

Query: 268 VKSFPTGQRFMPPFNMPKFQPAFVQYDAGFHQMSQIPR-TQTALNYGPPSDPSMNHYCAI 327
           V+  P+GQ F P        P  + +  GF     +PR  Q  LNYG P +P+++ +   
Sbjct: 249 VRVMPSGQSFSP-------MPIHIPFHDGF--FPHMPRGHQANLNYGHPLNPALSPF--- 308

Query: 328 GLNQTSRDAVYMQWP-SPAMMYA 331
               T   A Y  WP SP M YA
Sbjct: 309 ----THNVASYTPWPNSPVMNYA 314

[Close]

BLAST of Spo02891.1 vs. TAIR (Arabidopsis)
Match: AT2G40960.1 (Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 260.8 bits (665), Expect = 1.300e-69
Identity = 164/325 (50.46%), Postives = 212/325 (65.23%), Query Frame = 1

		  
Query: 30  VDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHYGL 89
           VDPFLVEALQNPRH   +LRMELD+Q+FLQ+PDQ QFEFQHFPTSYLR AAHRVA HYGL
Sbjct: 21  VDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRFAAHRVANHYGL 80

Query: 90  QTMVLDTLIDGAGTKIMVIKTAESKYPSVCLSDIP-RQSDSNKHDQVKIAIRRRPSGTSS 149
            T V D   DG  ++I+V K+++S++P+  LS+IP +QS++ K + +K+ I+ RP+   S
Sbjct: 81  ITSVRDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMKVVIKPRPT-KGS 140

Query: 150 GDAGDGLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQVSADGKGLYPSKDESQ 209
           G  GD LK   ++SVEERKE+YD+ARARIF+   +   +D+ S+ +        S+DE+Q
Sbjct: 141 GMEGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETNPWRVNCSSSRDENQ 200

Query: 210 NFVN---DLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSYDRYVKSFPTGQRF-MP 269
              N   + DKN   R    +SR+ AI +DREKDRYDPDYDRS  RY+ + P  Q   + 
Sbjct: 201 VLKNGNIEADKNNISRKSNPASRI-AILRDREKDRYDPDYDRSNYRYISNLPVDQNLCVA 260

Query: 270 PFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPPSDPSMNHYCAIGLNQTSRD-AVYM 329
            FN+         YD GF   S  P    +LN G  S   M+     GLNQ SRD A+YM
Sbjct: 261 HFNIQTMGTPI--YDMGFRGYS--PTAPPSLNLGQHS--VMSPCVTTGLNQPSRDAAMYM 320

Query: 330 QWP-SPAMMYAHSYDQFRHSVFQLQ 345
           QWP + A+MY HSYD FR+S FQ Q
Sbjct: 321 QWPNAAAVMYTHSYDHFRNSPFQAQ 337

[Close]

BLAST of Spo02891.1 vs. TAIR (Arabidopsis)
Match: AT5G05100.1 (Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 250.0 bits (637), Expect = 2.200e-66
Identity = 163/346 (47.11%), Postives = 213/346 (61.56%), Query Frame = 1

		  
Query: 28  SLVDPFLVEALQNPRH---LLRMELDIQKFLQNPDQVQFEFQHFPTSYLRLAAHRVAQHY 87
           ++VDPFLVEALQNPRH   +LRMELDIQKF Q+P+Q Q+EFQ  PTSYLRL AHRVAQHY
Sbjct: 9   AMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIAHRVAQHY 68

Query: 88  GLQTMVLDTL-IDGAGTKIMVIKTAESKYPSVCLSDIPRQSDS--NKHDQVKIAIRRRPS 147
           GL T  L+   +DG+G +I+  KT ES+YP VCLS+IP +      + +  KIAI+ RP+
Sbjct: 69  GLFTTALEGGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGFKIAIKPRPN 128

Query: 148 -GTSSGDAGDGLKQNSVRSVEERKEEYDKARARIFSSPNSPVSDDAMSQ--------VSA 207
            G     +G G+++N +RSVEERKEEYDKARARIF+SP+S  S+D+ ++        + +
Sbjct: 129 RGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSTRAPPPPYPRLDS 188

Query: 208 DGKGLYPSKDESQNFVN------DLDKNISVRDVGNSSRVAAIFKDREKDRYDPDYDRSY 267
                 PS++E++  VN      D+++N  +RD G +SRVA I +DREKDRYDPDYDR+ 
Sbjct: 189 KHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGRTSRVA-IIRDREKDRYDPDYDRN- 248

Query: 268 DRYVKSFPTGQRFMP-PFNMPKFQPAFVQYDAGFHQMSQIPRTQTALNYGPPSDPSMNHY 327
            RYV+  P  Q F P P  +P        +DA F QM   PRTQ +LNYG P +P+M   
Sbjct: 249 -RYVRVAPPVQNFNPIPIPLPF-------HDAIFPQM---PRTQASLNYGHPLNPAMT-- 308

Query: 328 CAIGLNQTSRDAVYMQWPSPAMMYAHSYDQFRHSVFQLQQQHHERH 352
                        Y +WPS  M YA +              HH RH
Sbjct: 309 ----------APSYTEWPSATMTYAQT--------LNASDVHHFRH 321

The following BLAST results are available for this feature:

BLAST of Spo02891.1 vs. NCBI nr
BLAST of Spo02891.1 vs. UniProtKB/TrEMBL
BLAST of Spo02891.1 vs. ExPASy Swiss-Prot
BLAST of Spo02891.1 vs. TAIR (Arabidopsis)

BLAST of Spo02891.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902101800\|gb\|KNA03546.1\|	1.0e-190	98.8	hypothetical protein SOVF_2081...	[more]
gi\|731324634\|ref\|XP_010673076.1\|	6.4e-140	78.6	PREDICTED: uncharacterized pro...	[more]
gi\|225440145\|ref\|XP_002283240.1\|	1.2e-109	66.0	PREDICTED: R3H domain-containi...	[more]
gi\|703155041\|ref\|XP_010111099.1\|	2.7e-106	61.8	R3H domain-containing protein ...	[more]
gi\|567875841\|ref\|XP_006430510.1\|	7.9e-106	61.7	hypothetical protein CICLE_v10...	[more]

BLAST of Spo02891.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QAJ5_SPIOL	7.3e-191	98.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8CN97_BETVU	4.5e-140	78.6	Uncharacterized protein OS=Bet...	[more]
A5AMT9_VITVI	8.2e-110	66.0	Putative uncharacterized prote...	[more]
W9SHI2_9ROSA	1.9e-106	61.8	R3H domain-containing protein ...	[more]
V4SXI9_9ROSI	5.5e-106	61.7	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo02891.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
R3HD1_HUMAN	1.3e-7	32.4	R3H domain-containing protein ...	[more]
R3HD2_MOUSE	6.4e-7	30.7	R3H domain-containing protein ...	[more]
R3HD2_BOVIN	1.9e-6	26.7	R3H domain-containing protein ...	[more]

BLAST of Spo02891.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G56680.1	1.6e-77	51.0	Single-stranded nucleic acid b...	[more]
AT3G10770.1	1.4e-71	51.3	Single-stranded nucleic acid b...	[more]
AT2G40960.1	1.3e-69	50.4	Single-stranded nucleic acid b...	[more]
AT5G05100.1	2.2e-66	47.1	Single-stranded nucleic acid b...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	GENE3D	3.30.1370.50		coord: 44..114 score: 2.0
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 44..92 score: 1.0
IPR001374	R3H domain	SMART	SM00393	R3H_4	coord: 28..107 score: 2.
IPR001374	R3H domain	PROFILE	PS51061	R3H	coord: 41..110 score: 10
IPR001374	R3H domain	unknown	SSF82708	R3H domain	coord: 24..137 score: 9.22
IPR024771	SUZ domain	PFAM	PF12752	SUZ	coord: 131..178 score: 1.3
IPR024771	SUZ domain	PROFILE	PS51673	SUZ	coord: 111..179 score: 12
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 28..296 score: 3.2E-158coord: 314..344 score: 3.2E
None	No IPR available	PANTHER	PTHR15672:SF15	EXPRESSED PROTEIN	coord: 28..296 score: 3.2E-158coord: 314..344 score: 3.2E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding