Spo10558 (gene) | SpinachBase

Overview


Name	Spo10558
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Clavata3/esr-related 25 family protein
Location	chr1 : 39466928 .. 39471651 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGATGCATGAAAATACACAATTCAAAGCAAAAGTGTAGTGTTGGTATTGGGAACTCACCACTATAAAGCAAGAGGAGCCTTGTCTCCATGTCACGTTCCAAACCACCTAAGATCTTCATCTCATCCCCCCCCCCCCCCCCCCCCCNAGCTTTTCTCTCTCCTCTAAGTTCGAGAAAGTGTTACAAAATCCTATAAAGATATCAACAATAAAAACCAACCATGCAAACATCCTTCAAGACAAGTTATTATTAGACACAATCTCCTTAACAAGAAAGAATTCTTTCCTTGCCTTTTCTAGCTATTCCTCATTCATTTCCTCTCTTTCAAGTTAGAGAAAAACCCTAAACACAAATAAATCTTAGACTAATTAAGTAATTAATCACTAATTACTTTCTTAATCTCTCTTTTCGGCCCGCGCCCTAACCAATTATCTTACACATCAATTCTTCCTCATTATGCAATAATCATTGATTTTCGATCTTCCTTGCTCTAGCTAGCTAGTTTCCCAAAACTTATATATAGAGGAGGAGAACAAATTAGAGAAGTTGGAATATGAGTAGTAGGAAGTTTAATAAGTCTATGAATGGATTATTAAGAGTAATTACGTTAGTAAGCTTTTTGTGGCTTTCTTTGTTTGGAGTTTTAGCAAGTAGAGGAACAACGACGACGACGATGACAACAACAACAACAACAACAAAATCTCAGGACAAGCATAATGTGAAACATGAAGTAACCACGGTTGGAAGAGGGAAGTTATCGGCGCGTTCGAAGGTGGATATTAACTACATGAGCAAAAGAAAAGTACCTAATGGTCCTGATCCTATACATAACAGGTGTGTTAATAGCTGCTAGAATGTTAATTTCATTCTAATATTCAGGTTTTATCTCCCTCTTTTGATTGTTTAGGTTTAAATCTTTGTTAGAAGGACTTCCTAATTCACAATTTTCCATTATGTTCTAAATAATTCTGAAATTTTCTTTTATTATGTACTTCTTGCATGGAAATTAAACGAAACCCTGGGCCAAATACATGCATGAATAATTGAATACATATCCATGTGTTTTTCAGGAGTTCTATTATGCACTCGGGTGCAATTTCTGCTCAAAAATAAATTTTGCTCATTTAAAAGTTTTGAAATGAGTGAAAAATATACCGTTATTTTCCTTATTATCGTTTATTTGCGATTATATATAGGATTTCTCTGAAATAATGTAATAATTATTTGTGACATTTTCTTTACACTATAATTGATTTTGTAGTTTTTTTTTCACGACCCCATACTAAAATTTCTAGGATTTTTATGTCCCTTAATTATATAGTTTAGATATTCCATAAAAATAAAAAATAAAAACAAAAAAAAACTACATGTATACCCTTATCATACTCGTTTGAGAATAATGTAAAGTAATTTATTATTTATCTTATCTTGAGAAGCATTCTATGATTTGTCTATATCACATGTGTGCCCTGAAGTAAACAAAGAATATTGGCCTTCTATATATACGGAGTAGTTCAATATACTATTTTCATAGCTAAACAAATTTTCTCTTAAAAAAGCAAGTATATATTCTCGTAATTTTCATGTTATTAAAGGGCATGCATAAAATGAAAAACTTCCATATATAGTCATATAGAGGCGTGCATAAATATAACGCGAAAGTTTTTTATTACTACGAGTTTTAATTTTAACATCTTTGTTATGTCAAATTATATTGTTGCGATTGCTTCCTTGCAGTACGTGAATACTGCCTTGGAAAAATCATCAGGTTGCCCATGACTAAAGTCGTCGTAAATCGTAATGGGTGAGCTAAACTCATTTTACTAAAGTACCCCTGAATTTCAATATTCACCAACCAAAGCAAATGAAAAGCAAACTCAGCTTGTTGTATGCTTTATTATATTCCAAGTAGAATATAAATTTGGTTAAAGTTAATTAACATATAATTTTGGTTCCACTTTGAATAGAATGAAGCTTTTGCAGAAACTAACGTACTCTTTAATTTTATTTGTGCAACAATCTTTTTTCTTCTTTACAATATCTTACAGAGAAGAACCTGTTAGCTAAGTAATTGTTTTTAATAAAGATATTAAAGAGGTTATTTTCTGAAACAAGCATCTTCTTTAAAGTAACTTGCAAAAACTTAGCATTTTCAAGTTGCTTTTGTTGCCTTATCAAAGTAGAAGCCTCTCTTTTCAGTCTCTGTAACTAGTACGTAGTACTAGCATATATACTCCTCCGTTCTCTAGAACTCTGTGGATTGTAGTTGTAACGTTGGTTTGGATATGGGGATTAATAGTGGGTGTTAGGCGTTGTGGACTTATTTTGACTGAATTTATATTATCTAAATTTATCTGAATTTAACTGAACTTCTCTAAACTTATTTTATCTGGAAAAAAAAAACTAATTTTGTCTGAAATAAACTTATTTGTGTGTGAAAATGTCTGACAAAAACATATTTTTGCTGAACTTATATTATCTGAACTTATTTGATCTTACTTTGTCTATAATAAGTCAAAAGAAGTCGAACAGAACAGAGCCTAAGTAATAGATTAAACCAAAGTAAAGGGAAAAGTTATAATTTGAATAGTGAGTTGTTGCCAAAAATAACAGCGATGCAATTAAAATTAAATTGTCATTTGAAAAAAGTGTTGCAGCTGTTAGAAAACAAAGGAAGTATCAACTAACAAATGTACTACGGCCGGAGTAATTGAGAATCCTTGAGTTTGTACATAGAGTTACTAGTAAGAATACATAATTAATGCTTAATTAGTGAACAAATCCATTCTTAATTGACTATTTATTCCCTTTTTGACGGCCAAACCCTCCACAATTTTGAACGGGGTACATGTTTTGAACTGGGAAAGCTGGTCAAAGAATGCTTTAATAAGCAAAGGCAACACATAAACAGTCCTCAAAGTTGTTTTCTCTTGCAAAATGTACTCTATCTAGCGTCGTGTATGTACACATGGATCTATGTTCACCTAAATGGCGTGTGTTATACATGAGCCGGCGTCATTCACTTTGGAAACGTGAACGTGTGGCCGACCCGACCTCGTAATCCAAAAAGATCATTCTATTTAATTTTGCCCTAGCTTAATCGTTCCGTGCTTATTAAATTGACTAAAGATTTTCCTTTCCTTCAACCAATTCGGTTGTCTGAAACTCTGAACTCCCCGATCACTCTCCGCAGTCTCGCTCCCTTTTTGGAATACGCGGTCGGGTTAGCTGGTTGTTTAGAGAGACCAAGAATAAACACGGGCGTTCCCTCGTGTTCGTAACAATCACTTTAAACCGCGGAAAGAACGAAAGATGTGCTCAAAAATTTAAGTTATGCAGTTGATTATATACTCCCTCTGTATTTATTTAAGAGATACACTTGCCTTTTCCGGCCGTATTTATTTAAGAGATACATTTGCCATTTTTAGTAACTTATCTACCCCACCATCTAATTAAATAATATATATACACCTCACCCCCACCCCCACTCCCTAAAATGACATGGTCCCCACTTGTTTTTCTTATTAAAATATCTACTTAACCCCACTTGTTTTATTACTTTATTTCATTCAATTATTTTTCTTATTACCCGTGCCCGGCCAAGTGTATCTCTTAAATAAATACGGAGGGAGTATGTAACGTTAACGTGTTAACCTTTGTGCGTGTAGTTGAGGGTAATTCCCTTTGGGCTTACTCGTGCGAAATGTACATACTCCGTATGATAGATATTATTAATTCCACTTCTTTGAAGTTCTTTCTGAAATTTTCTTTGGATATCTCATACTCCACAAGAATTCGGCCATGGATGCATATTTATTTGGTGGGTCCTTCAAATTAGACATCGAATAATCGCCAATTTCGACTTGTTCCAAGACTTGCTAGTTTGAAGAGTAACATGACTATGTAGTAAAGATTTATTTTCTCCCATTACATAAAAATATAATAATTTATCCAAAATGGATTTGAATAATGTCTCATCCGTTAAATATGAAGTATAATCTAAAATTAATTGTAACAACTTTTATCCGTATATCGCGACATGTGTCAGCCATCTTTTATATTTACATGACAGCGAAATAAATGAGAAAGGAAATCAATAATGTTTAGCTAGTACGGAATAACAAATATGCCAAAACAAAATAAATTTCCCATCGAATTAAAACAAATGCCCACACCAAACTAGTGTAAAGAAAATCGTACCTAAAAAAAGAAATTGAGAGTAACATTTTTATTTCAATTAACGAAAATAGACTTTTGGTTACATTGCCATGTACAATTTGTACCTCACTTCATACTATGTACAAAGTATAGCTAGGATGAATCAATAATTACTAATTACATAATTACTCCAGTAATTAGTCTTAATGTCTTACTATAATCTTCTTTTTTCTTTTGCTTTATCCAGGAGAGCTGGGAATTCAAGACGACCACCTGGACAAGCTTAGTGGACAAAAACAACCTGAGAGGAGTGAGAAGCTTCATCAATTATAAATAGCTCACCATATGATGAAGATCACGTGCATATCATCTTTTTTCAAATATTTTAGGAGTATTGTTTTTGTGAAATAGAACCCCCAAAAAAATTGAAAGTTCATTAAAGGAAAGCATCGCATGTTTGGATTGGATTTTATAAGTTTTGATCTGGCCTAATTTGAACTATTGTAAAATACATGTTTAAATATAGGTTTGAGTCCTACTCGTAGTCCTTTACCATTACATAGTGA

mRNA sequence

TAGATGCATGAAAATACACAATTCAAAGCAAAAGTGTAGTGTTGGTATTGGGAACTCACCACTATAAAGCAAGAGGAGCCTTGTCTCCATGTCACGTTCCAAACCACCTAAGATCTTCATCTCATCCCCCCCCCCCCCCCCCCCCCNAGCTTTTCTCTCTCCTCTAAGTTCGAGAAAGTGTTACAAAATCCTATAAAGATATCAACAATAAAAACCAACCATGCAAACATCCTTCAAGACAAGTTATTATTAGACACAATCTCCTTAACAAGAAAGAATTCTTTCCTTGCCTTTTCTAGCTATTCCTCATTCATTTCCTCTCTTTCAAGTTAGAGAAAAACCCTAAACACAAATAAATCTTAGACTAATTAAGTAATTAATCACTAATTACTTTCTTAATCTCTCTTTTCGGCCCGCGCCCTAACCAATTATCTTACACATCAATTCTTCCTCATTATGCAATAATCATTGATTTTCGATCTTCCTTGCTCTAGCTAGCTAGTTTCCCAAAACTTATATATAGAGGAGGAGAACAAATTAGAGAAGTTGGAATATGAGTAGTAGGAAGTTTAATAAGTCTATGAATGGATTATTAAGAGTAATTACGTTAGTAAGCTTTTTGTGGCTTTCTTTGTTTGGAGTTTTAGCAAGTAGAGGAACAACGACGACGACGATGACAACAACAACAACAACAACAAAATCTCAGGACAAGCATAATGTGAAACATGAAGTAACCACGGTTGGAAGAGGGAAGTTATCGGCGCGTTCGAAGGTGGATATTAACTACATGAGCAAAAGAAAAGTACCTAATGGTCCTGATCCTATACATAACAGGAGAGCTGGGAATTCAAGACGACCACCTGGACAAGCTTAGTGGACAAAAACAACCTGAGAGGAGTGAGAAGCTTCATCAATTATAAATAGCTCACCATATGATGAAGATCACGTGCATATCATCTTTTTTCAAATATTTTAGGAGTATTGTTTTTGTGAAATAGAACCCCCAAAAAAATTGAAAGTTCATTAAAGGAAAGCATCGCATGTTTGGATTGGATTTTATAAGTTTTGATCTGGCCTAATTTGAACTATTGTAAAATACATGTTTAAATATAGGTTTGAGTCCTACTCGTAGTCCTTTACCATTACATAGTGA

Coding sequence (CDS)

ATGAGTAGTAGGAAGTTTAATAAGTCTATGAATGGATTATTAAGAGTAATTACGTTAGTAAGCTTTTTGTGGCTTTCTTTGTTTGGAGTTTTAGCAAGTAGAGGAACAACGACGACGACGATGACAACAACAACAACAACAACAAAATCTCAGGACAAGCATAATGTGAAACATGAAGTAACCACGGTTGGAAGAGGGAAGTTATCGGCGCGTTCGAAGGTGGATATTAACTACATGAGCAAAAGAAAAGTACCTAATGGTCCTGATCCTATACATAACAGGAGAGCTGGGAATTCAAGACGACCACCTGGACAAGCTTAG

Protein sequence

MSSRKFNKSMNGLLRVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEVTTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo10558.1	Spo10558.1	mRNA

Homology

[Close]

BLAST of Spo10558.1 vs. NCBI nr
Match: gi|902208021|gb|KNA15823.1| (hypothetical protein SOVF_094570 [Spinacia oleracea])

HSP 1 Score: 126.3 bits (316), Expect = 3.100e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1


		  
Query: 43  TTTTTTKSQDKHNVKHEVTTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRP 102
           TTTTTTKSQDKHNVKHEVTTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRP
Sbjct: 2   TTTTTTKSQDKHNVKHEVTTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRP 61

Query: 103 PGQA 107
           PGQA
Sbjct: 62  PGQA 65

[Close]

BLAST of Spo10558.1 vs. NCBI nr
Match: gi|870855478|gb|KMT07211.1| (hypothetical protein BVRB_6g155330 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 122.5 bits (306), Expect = 4.500e-25
Identity = 71/106 (66.98%), Postives = 80/106 (75.47%), Query Frame = 1


		  
Query: 2   SSRKFNKSMNGLL-RVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEV 61
           S R F+KS+  LL RV  LVS LWLS+ GVLASRG TTT+ T +         H   H+V
Sbjct: 3   SGRLFDKSIKSLLKRVFLLVSLLWLSVVGVLASRGPTTTSPTIS---------HVKNHQV 62

Query: 62  TTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA 107
            T+GRGKL AR++VDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA
Sbjct: 63  DTIGRGKLLARTEVDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA 99

[Close]

BLAST of Spo10558.1 vs. NCBI nr
Match: gi|255558316|ref|XP_002520185.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Ricinus communis])

HSP 1 Score: 77.4 bits (189), Expect = 1.700e-11
Identity = 51/95 (53.68%), Postives = 61/95 (64.21%), Query Frame = 1


		  
Query: 13  LLRVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEVTTVGRGKLSARS 72
           L  VI ++ F+WL     L S      T TTT  T +     N KHEV  +GR KL    
Sbjct: 14  LYGVIAMLGFVWLLSVATLES---AAATKTTTPLTVQLSTTGNPKHEVD-IGREKLVYDP 73

Query: 73  KVDINYM-SKRKVPNGPDPIHNRRAGNSRRPPGQA 107
           ++D+NYM SKRKVPNGPDPIHNRRAGNS+RPPG+A
Sbjct: 74  ELDLNYMMSKRKVPNGPDPIHNRRAGNSKRPPGRA 104

[Close]

BLAST of Spo10558.1 vs. NCBI nr
Match: gi|590693811|ref|XP_007044437.1| (Clavata3/esr-related 26, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 76.3 bits (186), Expect = 3.700e-11
Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1


		  
Query: 2   SSRKFNKSMNGLLRVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEVT 61
           +S  F+K++ G L V+    F+ + L G L S    T T T  T T+ S  K  ++    
Sbjct: 10  TSSLFSKALFGTLVVL---GFILVLLVGTLQSEENETKT-TLRTETSSSTGK--LQEHAK 69

Query: 62  TVGRGK--LSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA 107
            +GRGK  +    ++D+NYMSKR+VPNGPDPIHNRRAGNSRRPPGQA
Sbjct: 70  VLGRGKSLIDGHPQLDLNYMSKRRVPNGPDPIHNRRAGNSRRPPGQA 110

[Close]

BLAST of Spo10558.1 vs. NCBI nr
Match: gi|224107855|ref|XP_002314627.1| (hypothetical protein POPTR_0010s04900g [Populus trichocarpa])

HSP 1 Score: 76.3 bits (186), Expect = 3.700e-11
Identity = 49/99 (49.49%), Postives = 62/99 (62.63%), Query Frame = 1


		  
Query: 9   SMNGLLRVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEVTTVGRGKL 68
           S   LL  I  V F+ L L G L S  T+  T +   +   +Q+     HE   +GR KL
Sbjct: 11  SFKVLLGGIATVVFVMLLLVGALESGATSKMTTSRLNSVQATQNDLKDDHEKDVIGREKL 70

Query: 69  SARSKVDINYM-SKRKVPNGPDPIHNRRAGNSRRPPGQA 107
              S++D+NYM SKR+VPNGPDPIHNRRAGNS+RPPG+A
Sbjct: 71  VYNSELDLNYMMSKRRVPNGPDPIHNRRAGNSKRPPGRA 109

[Close]

BLAST of Spo10558.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8E6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_094570 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.200e-26
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1


		  
Query: 43  TTTTTTKSQDKHNVKHEVTTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRP 102
           TTTTTTKSQDKHNVKHEVTTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRP
Sbjct: 2   TTTTTTKSQDKHNVKHEVTTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRP 61

Query: 103 PGQA 107
           PGQA
Sbjct: 62  PGQA 65

[Close]

BLAST of Spo10558.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EVI3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155330 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.100e-25
Identity = 71/106 (66.98%), Postives = 80/106 (75.47%), Query Frame = 1


		  
Query: 2   SSRKFNKSMNGLL-RVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEV 61
           S R F+KS+  LL RV  LVS LWLS+ GVLASRG TTT+ T +         H   H+V
Sbjct: 3   SGRLFDKSIKSLLKRVFLLVSLLWLSVVGVLASRGPTTTSPTIS---------HVKNHQV 62

Query: 62  TTVGRGKLSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA 107
            T+GRGKL AR++VDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA
Sbjct: 63  DTIGRGKLLARTEVDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA 99

[Close]

BLAST of Spo10558.1 vs. UniProtKB/TrEMBL
Match: B9S2G6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0699300 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.200e-11
Identity = 51/95 (53.68%), Postives = 61/95 (64.21%), Query Frame = 1


		  
Query: 13  LLRVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEVTTVGRGKLSARS 72
           L  VI ++ F+WL     L S      T TTT  T +     N KHEV  +GR KL    
Sbjct: 14  LYGVIAMLGFVWLLSVATLES---AAATKTTTPLTVQLSTTGNPKHEVD-IGREKLVYDP 73

Query: 73  KVDINYM-SKRKVPNGPDPIHNRRAGNSRRPPGQA 107
           ++D+NYM SKRKVPNGPDPIHNRRAGNS+RPPG+A
Sbjct: 74  ELDLNYMMSKRKVPNGPDPIHNRRAGNSKRPPGRA 104

[Close]

BLAST of Spo10558.1 vs. UniProtKB/TrEMBL
Match: B9HU81_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s04900g PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.600e-11
Identity = 49/99 (49.49%), Postives = 62/99 (62.63%), Query Frame = 1


		  
Query: 9   SMNGLLRVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEVTTVGRGKL 68
           S   LL  I  V F+ L L G L S  T+  T +   +   +Q+     HE   +GR KL
Sbjct: 11  SFKVLLGGIATVVFVMLLLVGALESGATSKMTTSRLNSVQATQNDLKDDHEKDVIGREKL 70

Query: 69  SARSKVDINYM-SKRKVPNGPDPIHNRRAGNSRRPPGQA 107
              S++D+NYM SKR+VPNGPDPIHNRRAGNS+RPPG+A
Sbjct: 71  VYNSELDLNYMMSKRRVPNGPDPIHNRRAGNSKRPPGRA 109

[Close]

BLAST of Spo10558.1 vs. UniProtKB/TrEMBL
Match: A0A061EDD3_THECC (Clavata3/esr-related 26, putative isoform 1 OS=Theobroma cacao GN=TCM_010103 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.600e-11
Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1


		  
Query: 2   SSRKFNKSMNGLLRVITLVSFLWLSLFGVLASRGTTTTTMTTTTTTTKSQDKHNVKHEVT 61
           +S  F+K++ G L V+    F+ + L G L S    T T T  T T+ S  K  ++    
Sbjct: 10  TSSLFSKALFGTLVVL---GFILVLLVGTLQSEENETKT-TLRTETSSSTGK--LQEHAK 69

Query: 62  TVGRGK--LSARSKVDINYMSKRKVPNGPDPIHNRRAGNSRRPPGQA 107
            +GRGK  +    ++D+NYMSKR+VPNGPDPIHNRRAGNSRRPPGQA
Sbjct: 70  VLGRGKSLIDGHPQLDLNYMSKRRVPNGPDPIHNRRAGNSRRPPGQA 110

[Close]

BLAST of Spo10558.1 vs. TAIR (Arabidopsis)
Match: AT3G28455.1 (CLAVATA3/ESR-RELATED 25)

HSP 1 Score: 49.7 bits (117), Expect = 1.300e-6
Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 1


		  
Query: 74  VDINYMSKRKVPNGPDPIHNRRAGNSRRPP 104
           V++ ++SKRKVPNGPDPIHNR+A  SRRPP
Sbjct: 50  VNLFHVSKRKVPNGPDPIHNRKAETSRRPP 79

The following BLAST results are available for this feature:

BLAST of Spo10558.1 vs. NCBI nr
BLAST of Spo10558.1 vs. UniProtKB/TrEMBL
BLAST of Spo10558.1 vs. ExPASy Swiss-Prot
BLAST of Spo10558.1 vs. TAIR (Arabidopsis)

BLAST of Spo10558.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902208021\|gb\|KNA15823.1\|	3.1e-26	100.	hypothetical protein SOVF_0945...	[more]
gi\|870855478\|gb\|KMT07211.1\|	4.5e-25	66.9	hypothetical protein BVRB_6g15...	[more]
gi\|255558316\|ref\|XP_002520185.1\|	1.7e-11	53.6	PREDICTED: CLAVATA3/ESR (CLE)-...	[more]
gi\|590693811\|ref\|XP_007044437.1\|	3.7e-11	48.6	Clavata3/esr-related 26, putat...	[more]
gi\|224107855\|ref\|XP_002314627.1\|	3.7e-11	49.4	hypothetical protein POPTR_001...	[more]

BLAST of Spo10558.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R8E6_SPIOL	2.2e-26	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8EVI3_BETVU	3.1e-25	66.9	Uncharacterized protein OS=Bet...	[more]
B9S2G6_RICCO	1.2e-11	53.6	Putative uncharacterized prote...	[more]
B9HU81_POPTR	2.6e-11	49.4	Uncharacterized protein OS=Pop...	[more]
A0A061EDD3_THECC	2.6e-11	48.6	Clavata3/esr-related 26, putat...	[more]

BLAST of Spo10558.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo10558.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G28455.1	1.3e-6	73.3	CLAVATA3/ESR-RELATED 25	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34277	FAMILY NOT NAMED	coord: 1..106 score: 8.9
None	No IPR available	PANTHER	PTHR34277:SF2	CLAVATA3/ESR (CLE)-RELATED PROTEIN 26	coord: 1..106 score: 8.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004672	protein kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16827	0.69	Barchart \| Table
Spo05530	0.68	Barchart \| Table
Spo23771	0.67	Barchart \| Table
Spo21388	0.67	Barchart \| Table
Spo19793	0.67	Barchart \| Table
Spo26037	0.66	Barchart \| Table
Spo18637	0.66	Barchart \| Table
Spo23386	0.66	Barchart \| Table
Spo19807	0.65	Barchart \| Table
Spo13972	0.65	Barchart \| Table