Spo10627 (gene)

Overview
NameSpo10627
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPhot
Locationchr1 : 40333403 .. 40334464 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTATAGCCGTTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATAGTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCCTTAGGGGGTTGGTTTACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTAACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTTGCTCTTCATGGTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGGTCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATGCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGTCGCTCTGCTATGCGCTATTCATGGTGCTACCGTTGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGACTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTCTTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

mRNA sequence

ATGACTATAGCCGTTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATAGTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCCTTAGGGGGTTGGTTTACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTAACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTTGCTCTTCATGGTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGGTCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATGCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGTCGCTCTGCTATGCGCTATTCATGGTGCTACCGTTGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGACTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTCTTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

Coding sequence (CDS)

ATGACTATAGCCGTTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATAGTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCCTTAGGGGGTTGGTTTACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTAACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTTGCTCTTCATGGTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGGTCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATGCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGTCGCTCTGCTATGCGCTATTCATGGTGCTACCGTTGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGACTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTCTTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

Protein sequence

MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo10627.1Spo10627.1mRNA


Homology
[Close]
BLAST of Spo10627.1 vs. NCBI nr
Match: gi|11497520|ref|NP_054928.1| (photosystem II protein D2 [Spinacia oleracea])

HSP 1 Score: 721.8 bits (1862), Expect = 5.600e-205
Identity = 350/353 (99.15%), Postives = 350/353 (99.15%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. NCBI nr
Match: gi|7525028|ref|NP_051054.1| (photosystem II protein D2 [Arabidopsis thaliana])

HSP 1 Score: 718.4 bits (1853), Expect = 6.200e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. NCBI nr
Match: gi|377581198|gb|AFB70737.1| (photosystem II D2 protein, partial (chloroplast) [Mollugo verticillata])

HSP 1 Score: 718.0 bits (1852), Expect = 8.100e-204
Identity = 348/353 (98.58%), Postives = 348/353 (98.58%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIAVGKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLW FVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. NCBI nr
Match: gi|377829870|ref|YP_005296095.1| (psbD gene product (chloroplast) [Pentactina rupicola])

HSP 1 Score: 717.6 bits (1851), Expect = 1.100e-203
Identity = 347/353 (98.30%), Postives = 348/353 (98.58%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLW FVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           F LIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. NCBI nr
Match: gi|139389637|ref|YP_001123194.1| (PSII D2 protein [Arabis hirsuta])

HSP 1 Score: 717.2 bits (1850), Expect = 1.400e-203
Identity = 347/353 (98.30%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFEL+RSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELSRSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A0U5CLC7_9BRAS (Photosystem II D2 protein OS=Arabidopsis pedemontana GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A109RTK3_CAPBU (Photosystem II D2 protein OS=Capsella bursa-pastoris GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A0U2JIX2_9BRAS (Photosystem II D2 protein OS=Schrenkiella parvula GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A0U2SJ90_9BRAS (Photosystem II D2 protein OS=Eutrema heterophyllum GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Match: A0A0P0KLX6_9ROSI (Photosystem II D2 protein OS=Ostrya rehderiana GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 4.300e-204
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_SPIOL (Photosystem II D2 protein OS=Spinacia oleracea GN=psbD PE=1 SV=3)

HSP 1 Score: 721.8 bits (1862), Expect = 3.500e-207
Identity = 350/353 (99.15%), Postives = 350/353 (99.15%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_CAPBU (Photosystem II D2 protein OS=Capsella bursa-pastoris GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 3.900e-206
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_ARATH (Photosystem II D2 protein OS=Arabidopsis thaliana GN=psbD PE=1 SV=3)

HSP 1 Score: 718.4 bits (1853), Expect = 3.900e-206
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_DRANE (Photosystem II D2 protein OS=Draba nemorosa GN=psbD PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 3.900e-206
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Match: PSBD_ARAHI (Photosystem II D2 protein OS=Arabis hirsuta GN=psbD PE=3 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 8.600e-206
Identity = 347/353 (98.30%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFEL+RSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELSRSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. TAIR (Arabidopsis)
Match: ATCG00270.1 (photosystem II reaction center protein D)

HSP 1 Score: 718.4 bits (1853), Expect = 2.200e-207
Identity = 348/353 (98.58%), Postives = 349/353 (98.87%), Query Frame = 1 

		  

Query: 1   MTIAVGKFTKDEKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60
           MTIA+GKFTKDEKDLFD MDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIF 180
           FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIY LGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFEDGDGANTFRTFNPTQ 240
           RFILFFQGFHNWTLNPFHMMGVAGVLG ALLCAIHGATVENTLFEDGDGANTFR FNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 354
           SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Sbjct: 301 SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL 353
[Close]
BLAST of Spo10627.1 vs. TAIR (Arabidopsis)
Match: ATCG00020.1 (photosystem II reaction center protein A)

HSP 1 Score: 146.4 bits (368), Expect = 3.400e-35
Identity = 89/300 (29.67%), Postives = 159/300 (53.00%), Query Frame = 1 

		  

Query: 10  KDEKDLFDSMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 69
           ++ + L+    +W+   +  +++GW G+L+ P    A   +             G+    
Sbjct: 8   RESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67

Query: 70  ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALI 129
           + S L G N ++ A+   + ++      +W   +  +   W   GG +  + LH    + 
Sbjct: 68  SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 127

Query: 130 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYALGQSGWFFAPSFGVAAIFRFIL 189
            +M R++EL+  + +RP+ A+A+S P+A   +VFLIY +GQ  +      G++  F F++
Sbjct: 128 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 187

Query: 190 FFQGFHNWTLNPFHMMGVAGVLGVALLCAIHGATVENTLFE---DGDGANTFRTFNPTQA 249
            FQ  HN  ++PFHM+GVAGV G +L  A+HG+ V ++L     + + AN    F   Q 
Sbjct: 188 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG--QE 247

Query: 250 EETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 300
           EETY++V A+ ++ ++     +F+N R LHFF+   PV G+W +ALG+  +A NL  ++F
Sbjct: 248 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
The following BLAST results are available for this feature:
BLAST of Spo10627.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|11497520|ref|NP_054928.1|5.6e-20599.1photosystem II protein D2 [Spi... [more]
gi|7525028|ref|NP_051054.1|6.2e-20498.5photosystem II protein D2 [Ara... [more]
gi|377581198|gb|AFB70737.1|8.1e-20498.5photosystem II D2 protein, par... [more]
gi|377829870|ref|YP_005296095.1|1.1e-20398.3psbD gene product (chloroplast... [more]
gi|139389637|ref|YP_001123194.1|1.4e-20398.3PSII D2 protein [Arabis hirsut... [more]
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BLAST of Spo10627.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0U5CLC7_9BRAS4.3e-20498.5Photosystem II D2 protein OS=A... [more]
A0A109RTK3_CAPBU4.3e-20498.5Photosystem II D2 protein OS=C... [more]
A0A0U2JIX2_9BRAS4.3e-20498.5Photosystem II D2 protein OS=S... [more]
A0A0U2SJ90_9BRAS4.3e-20498.5Photosystem II D2 protein OS=E... [more]
A0A0P0KLX6_9ROSI4.3e-20498.5Photosystem II D2 protein OS=O... [more]
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BLAST of Spo10627.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PSBD_SPIOL3.5e-20799.1Photosystem II D2 protein OS=S... [more]
PSBD_CAPBU3.9e-20698.5Photosystem II D2 protein OS=C... [more]
PSBD_ARATH3.9e-20698.5Photosystem II D2 protein OS=A... [more]
PSBD_DRANE3.9e-20698.5Photosystem II D2 protein OS=D... [more]
PSBD_ARAHI8.6e-20698.3Photosystem II D2 protein OS=A... [more]
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BLAST of Spo10627.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
ATCG00270.12.2e-20798.5photosystem II reaction center... [more]
ATCG00020.13.4e-3529.6photosystem II reaction center... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000484Photosynthetic reaction centre, L/MPRINTSPR00256REACTNCENTREcoord: 197..223
score: 9.4E-9coord: 142..164
score: 9.4E-9coord: 109..137
score: 9.
IPR000484Photosynthetic reaction centre, L/MGENE3D1.20.85.10coord: 10..187
score: 9.3E-50coord: 191..322
score: 1.5
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 29..318
score: 8.8
IPR000484Photosynthetic reaction centre, L/MPROSITEPS00244REACTION_CENTERcoord: 191..217
scor
IPR000484Photosynthetic reaction centre, L/MunknownSSF81483Bacterial photosystem II reaction centre, L and M subunitscoord: 16..352
score: 7.59E
IPR005868Photosystem II D2 proteinHAMAPMF_01383PSII_PsbD_D2coord: 1..353
score: 59
IPR005868Photosystem II D2 proteinTIGRFAMsTIGR01152TIGR01152coord: 1..353
score: 4.6E
NoneNo IPR availablePANTHERPTHR33149FAMILY NOT NAMEDcoord: 1..353
score: 2.4E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0008152 metabolic process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0055085 transmembrane transport
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0015979 photosynthesis
biological_process GO:0009769 photosynthesis, light harvesting in photosystem II
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0006412 translation
biological_process GO:0009853 photorespiration
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0010207 photosystem II assembly
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0034968 histone lysine methylation
biological_process GO:0006554 lysine catabolic process
biological_process GO:0046487 glyoxylate metabolic process
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005840 ribosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0009573 chloroplast ribulose bisphosphate carboxylase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0030076 light-harvesting complex
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0009507 chloroplast
cellular_component GO:0044425 membrane part
cellular_component GO:0009522 photosystem I
cellular_component GO:0009579 thylakoid
cellular_component GO:0016020 membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009523 photosystem II
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0018024 histone-lysine N-methyltransferase activity
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016984 ribulose-bisphosphate carboxylase activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0009678 hydrogen-translocating pyrophosphatase activity
molecular_function GO:0004427 inorganic diphosphatase activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0030785 [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo247170.97Barchart | Table
Spo170100.94Barchart | Table
Spo224450.94Barchart | Table
Spo062010.93Barchart | Table
Spo247080.92Barchart | Table
Spo062000.91Barchart | Table
Spo247070.90Barchart | Table
Spo042770.90Barchart | Table
Spo028510.89Barchart | Table
Spo042780.89Barchart | Table
Spo255550.87Barchart | Table
Spo261260.87Barchart | Table
Spo161960.83Barchart | Table
Spo255380.82Barchart | Table
Spo058750.82Barchart | Table
Spo164840.82Barchart | Table
Spo017480.81Barchart | Table
Spo164850.80Barchart | Table
Spo119040.80Barchart | Table
Spo180440.80Barchart | Table
Spo164900.79Barchart | Table
Spo084400.79Barchart | Table
Spo225720.78Barchart | Table
Spo247180.78Barchart | Table
Spo247190.77Barchart | Table
Spo261270.77Barchart | Table
Spo195600.77Barchart | Table
Spo190780.76Barchart | Table
Spo250040.76Barchart | Table
Spo006260.76Barchart | Table
Spo139570.75Barchart | Table
Spo094130.75Barchart | Table
Spo255370.75Barchart | Table
Spo195300.73Barchart | Table
Spo179230.72Barchart | Table
Spo073550.72Barchart | Table
Spo214390.72Barchart | Table
Spo211710.72Barchart | Table
Spo219460.71Barchart | Table
Spo109470.71Barchart | Table
Spo019720.70Barchart | Table
Spo067570.70Barchart | Table
Spo054120.69Barchart | Table
Spo219630.69Barchart | Table
Spo168950.69Barchart | Table
Spo063830.68Barchart | Table
Spo195610.68Barchart | Table
Spo163840.68Barchart | Table
Spo164860.68Barchart | Table
Spo242020.68Barchart | Table
Spo022030.68Barchart | Table
Spo215950.67Barchart | Table
Spo148160.67Barchart | Table
Spo139590.67Barchart | Table
Spo130530.67Barchart | Table
Spo085240.67Barchart | Table
Spo092600.66Barchart | Table
Spo162660.66Barchart | Table
Spo199750.66Barchart | Table
Spo176180.66Barchart | Table
Spo195180.66Barchart | Table
Spo039730.66Barchart | Table
Spo265260.66Barchart | Table
Spo024980.66Barchart | Table
Spo024850.66Barchart | Table
Spo181790.66Barchart | Table
Spo138740.66Barchart | Table
Spo119930.65Barchart | Table