Spo21002 (gene)

Overview
NameSpo21002
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNudC domain-containing protein, putative
Locationchr1 : 42357411 .. 42360730 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGGGAAGTGTATTCGGCAAATTTTCCTAATTGCCCAAAATAGTCGGGTGATTGAACTCATTTTATACTTTATAGTATTCTCACAATCTCACTTGGTCCCCCGTCCTCTCCATCGGGAATAATCTGGAAGTTCATATTATAGCCCGGAAACGCCCAAATAACACTTCACCACTTCGCCGGAACCCTAATTTCCGAAATATTCATGGCCGAAAAATTGGCTCCCGATAAGCGCCATGTCTTTGTTCACAACGGTATCCCTTTACCCCTCTTTGTTTCTTGTGAATTCGATCGACTGATTAGTTTGATTGCAAATTTTGACTTTCAATTGGATTTTCCCAATTTATCAGGTCAGAAGGTGTTTGAATGGGATCAAACCCTAGATGAGGTTAACATGTACATAACATTACCTCCAAATGTGCCTACAAAGCAATTTTTTAGCAAAATTCAGTCTAAGCATGTCGAAGTTGGGATTAAAGGCAATCCTCCTTATCTTAATGTTAGTATTTGCATAAAGTTGTTATTTTTAGTTGATTTATCATTTCCTATTTTTCCAGATGGAAATGCTTATTTGATTGTTGATGATGTAATTTTGTTGTGGTTTTTCAGCATGATTTGGAGCATCCTGTGAAGACTGACTCCTCTTTCTGGACTTTGGGTAAGTTTTCGTTCTGTAAGCAGTTTTCTAGATTGTGAAATTGTATGCCAAGTGAATTGAATCATATAGTTAAGGAATTCATCAAATTGGTTATAAAAATGGTACTCTGAACAGTCTAAACACTCGACATTAGAAGTGGCTAATACAAAAGAAAACGTAAAATACTCGTATATGAGTTAATGTGTGGTTGCAAGTGGTGTTATGGACTTGTTCAGGGCTTGGTCGGCGATTCACTTTGTGTGAAAGCCACCTTAGGACTTAGGTAGATTCCCTTCTCTTATGTTTTCAAATTTCAACTGTGTCATAACCTTGTTTATAAATTGATGTCAAAGTACGTCATGCTTAAAAAGTCCAGAGGATCGTTCTTGCTGAACTATGTTATTTGTGCTTAGTTCTATGGAAACATGTAGTTACATGTATGCAGCTGGGTTTGGCTTTCTTGTGAGATGTGCAGTGTTATTGGTTTAATCAGTGTAGTGTCTTGTTTTGTTGTCTGATTGCTGGATGATACGTTGTTCGTAGATGTTGAACTATCTTTTTGAATGTCAGAGGACGATACGATGCATATAACCTTGCAAAAGAGGGAGAAAGGCCTAACATGGTCTTCACCTATCGTTGGTCAAGGTCAGCTGGATGCTTATGCTGCAGATCAAGAGCAGAAGCGCTTGATGCTCCAGCGTTTTCAAGAAGAGGTAATTTGTTATCATTGTATTCTTTTTTCAAATTGTAGACTTGTAGTATCTGCTACAGTTATGCATATCTAGTTGTGCTTCATTAATAGAGGTTATCAGGTAAAGTTTCACTAAGGACATGCTTGGATTGAGGGTAATGTATTAAAGGGGTAATAAAAGTCAAACTAAGGTAATTGAAGGTGATGACGAGGGATGAAGTGGTGGCAAAGGAAACAAGCTAGTGTTGGCAAGAGGAAAATAAAAGTGAAGGAGGAACAAATACCTCATCATGGGGGGAGTAGTTACCCACCATCCCACTAGGGTGATTATTACCCTCATTTGGGGGTAATTACTTCCCCCCTTCCTCCCTTCTCCTCACAACACCACCACTACCACAACTTCTCATCACAATACCACCACACCACCCTCCTTGCAACCACCTCAATTCACCTTCATTGTCCTTTTATTATGGTGGTTTGACTTTTATTACCTCCATAATCCATTACACCCAATCCAAGCGTGCCCTAAGTGGAAATTCTTGCGATAATCTAAAATAAGAAATATTTTGGAAAGTGGAAACCTATCCATTGGAATAGCAATACGATTTGTCTTGCCAGAAAATGAAAAAACAATAGTGGCAAATCTCAATTTATTTTTGGGTTTTGCTTAAAGAGTTCTTTGTGCTTTCGTCAGGTGAAAATATTTAGAAACTAATTGGCAATGCTGTTTTTAGGGTGATCGTTTGCTTCATTGCTTGTTTATATCTTGATTGTTGTTCAGTTATCATTTTAAAAAAAAATTTGTTTGTTTTATTGGGGTGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGCGAGTAATTGATATGGCTGATAAGGTAGTTAAACAAAATATTTTAGCTATAATGCGTTATCGTTTCATGATTAGGAGCCCTGGCAATCAACTTATTGACATGTCCTTCATTGGGGGTGTAGACCTCTTCATTCTTCAATGTTTTTTCTAATGTTTTATGCAGTTGGACAATTCAAAATTTGTTACATCTCTATATCATGCTTTAAGACACGTCTTGATCAATCCAACAGTGAACATTTGATTGAAAGGGCACTGAGATGGATGATATATTTGATACTGGCTTGTCTTCTATGTAAGTGGATGGAGAATTCACGATCAAGATCAAACAAGTTGGACCTAACTTCAGAACTTTCATCCCTAGCAATTGACACCAACATGTGAGACGAACACACCAAATTGTTCCATCTGTTGGTTTGAGGACCTAATCAAGTAATCATATATTTTGATGTTTGAACTGAGCTGGCATGTTTTGAAACATGGAGTTAGGACAAATTCTATGACATAGCTAAGCAATCTTTCGGGTCATTAGAATAATGGGTATTATATAGAATCCTAGGAAGCTCAAGTTGAAATCCGCCTCTGTAGTTCTACCTTTTGGCTTCAGTTCCCTGTTTCTTTACCCCTGAGTAGAAAGCCTTGGTATATACAGATTATTGCTCTATCCTGTTGAGATTTGTTGGGCTTTGGTTGAATTGGAGTGGTTATAATTGCTTTTGGGTTAATGTCTCATGTCACCTTTTTGGCTGGAGTATTTGTTACTTGCCACAAAACAGTCATGCTCCTATATTCCCTGATAGGAACAGGTTATTTGCATCCAAGGCCGCTGCTTGAAAACATCTTTGATCTTTTCACACTAGGTATAATAGTGTGATTATCTGTTCTGATTGTTTTGCTGTGTCGTGGGACTTTCAAATGCTTTGTTTATGTATGCCCTGTCTGATGCAGCTGCTCGATTTGTCCATATATTTCAGTTTACTTATAATTGGATAATTAGTTGTGAGGTGTGGTCCATGGTGCATCAACTTTTCAACCGTCTTAAGTACTTGCTTTTTTTCTCGCAGAACCCTGGTTTTGACTTCTCGCAAGCAGATTTCAGTGGAAACTGTCCAGATCCAAGAACCTTCATGGGCGGAATTCGCTAG

mRNA sequence

AGAGGGAAGTGTATTCGGCAAATTTTCCTAATTGCCCAAAATAGTCGGGTGATTGAACTCATTTTATACTTTATAGTATTCTCACAATCTCACTTGGTCCCCCGTCCTCTCCATCGGGAATAATCTGGAAGTTCATATTATAGCCCGGAAACGCCCAAATAACACTTCACCACTTCGCCGGAACCCTAATTTCCGAAATATTCATGGCCGAAAAATTGGCTCCCGATAAGCGCCATGTCTTTGTTCACAACGGTCAGAAGGTGTTTGAATGGGATCAAACCCTAGATGAGGTTAACATGTACATAACATTACCTCCAAATGTGCCTACAAAGCAATTTTTTAGCAAAATTCAGTCTAAGCATGTCGAAGTTGGGATTAAAGGCAATCCTCCTTATCTTAATCATGATTTGGAGCATCCTGTGAAGACTGACTCCTCTTTCTGGACTTTGGAGGACGATACGATGCATATAACCTTGCAAAAGAGGGAGAAAGGCCTAACATGGTCTTCACCTATCGTTGGTCAAGGTCAGCTGGATGCTTATGCTGCAGATCAAGAGCAGAAGCGCTTGATGCTCCAGCGTTTTCAAGAAGAGAACCCTGGTTTTGACTTCTCGCAAGCAGATTTCAGTGGAAACTGTCCAGATCCAAGAACCTTCATGGGCGGAATTCGCTAG

Coding sequence (CDS)

ATGGCCGAAAAATTGGCTCCCGATAAGCGCCATGTCTTTGTTCACAACGGTCAGAAGGTGTTTGAATGGGATCAAACCCTAGATGAGGTTAACATGTACATAACATTACCTCCAAATGTGCCTACAAAGCAATTTTTTAGCAAAATTCAGTCTAAGCATGTCGAAGTTGGGATTAAAGGCAATCCTCCTTATCTTAATCATGATTTGGAGCATCCTGTGAAGACTGACTCCTCTTTCTGGACTTTGGAGGACGATACGATGCATATAACCTTGCAAAAGAGGGAGAAAGGCCTAACATGGTCTTCACCTATCGTTGGTCAAGGTCAGCTGGATGCTTATGCTGCAGATCAAGAGCAGAAGCGCTTGATGCTCCAGCGTTTTCAAGAAGAGAACCCTGGTTTTGACTTCTCGCAAGCAGATTTCAGTGGAAACTGTCCAGATCCAAGAACCTTCATGGGCGGAATTCGCTAG

Protein sequence

MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21002.1Spo21002.1mRNA


Homology
BLAST of Spo21002.1 vs. NCBI nr
Match: gi|902240181|gb|KNA25916.1| (hypothetical protein SOVF_002380 [Spinacia oleracea])

HSP 1 Score: 334.3 bits (856), Expect = 1.100e-88
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG
Sbjct: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK
Sbjct: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. NCBI nr
Match: gi|731348579|ref|XP_010685559.1| (PREDICTED: nudC domain-containing protein 2 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 305.1 bits (780), Expect = 7.200e-80
Identity = 141/156 (90.38%), Postives = 147/156 (94.23%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MA+KLAPDK H FVHNGQKVFEWDQTLDEVNMYI LPPNVPTKQF+SKIQSKHVEVGIKG
Sbjct: 1   MADKLAPDKLHAFVHNGQKVFEWDQTLDEVNMYIALPPNVPTKQFYSKIQSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYL+HDL+HPVKTDSSFWTLEDDTMHITLQKR+KG TWSSPIVGQGQLD   AD EQK
Sbjct: 61  NPPYLSHDLQHPVKTDSSFWTLEDDTMHITLQKRDKGQTWSSPIVGQGQLDPLNADLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSG+CPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGDCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. NCBI nr
Match: gi|351723663|ref|NP_001236519.1| (uncharacterized protein LOC100306544 [Glycine max])

HSP 1 Score: 296.2 bits (757), Expect = 3.300e-77
Identity = 136/156 (87.18%), Postives = 145/156 (92.95%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YITLPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+GQGQLD YA D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. NCBI nr
Match: gi|1012364928|gb|KYP76110.1| (NudC domain-containing protein 2 [Cajanus cajan])

HSP 1 Score: 294.7 bits (753), Expect = 9.700e-77
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YITLPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+G+GQLDAY+ D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGEGQLDAYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA F+GNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. NCBI nr
Match: gi|747055869|ref|XP_011074183.1| (PREDICTED: nudC domain-containing protein 2 [Sesamum indicum])

HSP 1 Score: 294.3 bits (752), Expect = 1.300e-76
Identity = 136/156 (87.18%), Postives = 142/156 (91.03%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH F+HNGQKVFEWDQTL+EVNMYITLPPNVP K F  KI SKHVEVGIKG
Sbjct: 1   MAEKLAPEKRHSFMHNGQKVFEWDQTLEEVNMYITLPPNVPKKLFCCKIDSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL HPVKTDSSFWTLEDD MHITLQKR+KG TWSSPI+GQGQLD Y  D EQK
Sbjct: 61  NPPYLNHDLMHPVKTDSSFWTLEDDIMHITLQKRDKGQTWSSPIMGQGQLDPYTTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSG+CPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGSCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2D9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_002380 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 7.700e-89
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG
Sbjct: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK
Sbjct: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVD2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g172190 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 5.000e-80
Identity = 141/156 (90.38%), Postives = 147/156 (94.23%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MA+KLAPDK H FVHNGQKVFEWDQTLDEVNMYI LPPNVPTKQF+SKIQSKHVEVGIKG
Sbjct: 1   MADKLAPDKLHAFVHNGQKVFEWDQTLDEVNMYIALPPNVPTKQFYSKIQSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYL+HDL+HPVKTDSSFWTLEDDTMHITLQKR+KG TWSSPIVGQGQLD   AD EQK
Sbjct: 61  NPPYLSHDLQHPVKTDSSFWTLEDDTMHITLQKRDKGQTWSSPIVGQGQLDPLNADLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSG+CPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGDCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: C6SZU0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G063100 PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.300e-77
Identity = 136/156 (87.18%), Postives = 145/156 (92.95%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YITLPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+GQGQLD YA D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: A0A151U9W1_CAJCA (NudC domain-containing protein 2 OS=Cajanus cajan GN=KK1_020334 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.800e-77
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YITLPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+G+GQLDAY+ D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGEGQLDAYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA F+GNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PF32_GLYSO (NudC domain-containing protein 2 OS=Glycine soja GN=glysoja_030299 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 8.900e-77
Identity = 135/156 (86.54%), Postives = 144/156 (92.31%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YI LPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYIALPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+GQGQLD YA D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: NUDC2_HUMAN (NudC domain-containing protein 2 OS=Homo sapiens GN=NUDCD2 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.700e-17
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 1

		  

Query: 22  EWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFWT 81
           +W QTL+EV + + +PP    +     +QS+HV + + G    L   L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSVGGRE-ILKGKLFDSTIADEGTWT 79

Query: 82  LEDDTMH---ITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KR+    W+S +  +   D +  DQ Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 ADFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144

BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: NUDC2_MOUSE (NudC domain-containing protein 2 OS=Mus musculus GN=Nudcd2 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.700e-17
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 1

		  

Query: 22  EWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFWT 81
           +W QTL+EV + + +PP    +     +QS+HV + + G    L   L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKGKLFDSTIADEGTWT 79

Query: 82  LEDDTMH---ITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KR+    W+S +  +   D +  DQ Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 ADFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144

BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: NUDC2_RAT (NudC domain-containing protein 2 OS=Rattus norvegicus GN=Nudcd2 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.700e-17
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 1

		  

Query: 22  EWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFWT 81
           +W QTL+EV + + +PP    +     +QS+HV + + G    L   L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKGKLFDSTIADEGTWT 79

Query: 82  LEDDTMH---ITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KR+    W+S +  +   D +  DQ Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 ADFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144

BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: NUDC1_DANRE (NudC domain-containing protein 1 OS=Danio rerio GN=nudcd1 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.300e-9
Identity = 35/121 (28.93%), Postives = 60/121 (49.59%), Query Frame = 1

		  

Query: 7   PDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLN 66
           P  + + V N   ++ W QT ++V + + LP          K+    + V +    P L+
Sbjct: 267 PPVQDMEVGNSDPIYFWQQTEEDVTLCVRLPEGTTKDDIRFKLTVDCLRVRVGDYAPLLD 326

Query: 67  HDLEHPVKTDSSFWTLEDD-TMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQ 126
             L  PV  ++S WT+ DD ++ ++LQKR +G  WS  ++G  +   Y  + EQK  + Q
Sbjct: 327 GQLFAPVDPEASTWTMNDDKSLEVSLQKRSEGPLWSEVVLGD-RRGEYLMNDEQKSQLQQ 386

BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: BOB1_ARATH (Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.000e-9
Identity = 38/158 (24.05%), Postives = 66/158 (41.77%), Query Frame = 1

		  

Query: 21  FEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFW 80
           + W Q L EV + I +P     +    +I+   ++VG+KG  P ++ +L   VK D  +W
Sbjct: 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYW 206

Query: 81  TLEDD-TMHITLQKREKGLTWSSPIVGQGQLDAYAADQE--------------------- 140
            +ED   + I L K ++   W   + G+ ++D    + E                     
Sbjct: 207 NIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFD 266

Query: 141 --------------QKRLMLQRFQEENPGFDFSQADFS 143
                         QK+ +L++F  E+P  DFS A F+
Sbjct: 267 QRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKFN 304

BLAST of Spo21002.1 vs. TAIR (Arabidopsis)
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 290.8 bits (743), Expect = 5.000e-79
Identity = 134/156 (85.90%), Postives = 141/156 (90.38%), Query Frame = 1

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH F+HNGQKVFEWDQTL+EVNMYITLPPNV  K F  KIQSKH+EVGIKG
Sbjct: 1   MAEKLAPEKRHDFIHNGQKVFEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTD SFWTLEDD MHITLQKREKG TW+SPI+GQGQLD YA D EQK
Sbjct: 61  NPPYLNHDLSAPVKTDCSFWTLEDDIMHITLQKREKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSGNCPDPR+FMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR 156

BLAST of Spo21002.1 vs. TAIR (Arabidopsis)
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.700e-10
Identity = 38/158 (24.05%), Postives = 66/158 (41.77%), Query Frame = 1

		  

Query: 21  FEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFW 80
           + W Q L EV + I +P     +    +I+   ++VG+KG  P ++ +L   VK D  +W
Sbjct: 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYW 206

Query: 81  TLEDD-TMHITLQKREKGLTWSSPIVGQGQLDAYAADQE--------------------- 140
            +ED   + I L K ++   W   + G+ ++D    + E                     
Sbjct: 207 NIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFD 266

Query: 141 --------------QKRLMLQRFQEENPGFDFSQADFS 143
                         QK+ +L++F  E+P  DFS A F+
Sbjct: 267 QRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKFN 304

The following BLAST results are available for this feature:
BLAST of Spo21002.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902240181|gb|KNA25916.1|1.1e-88100.hypothetical protein SOVF_0023... [more]
gi|731348579|ref|XP_010685559.1|7.2e-8090.3PREDICTED: nudC domain-contain... [more]
gi|351723663|ref|NP_001236519.1|3.3e-7787.1uncharacterized protein LOC100... [more]
gi|1012364928|gb|KYP76110.1|9.7e-7785.9NudC domain-containing protein... [more]
gi|747055869|ref|XP_011074183.1|1.3e-7687.1PREDICTED: nudC domain-contain... [more]
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BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2D9_SPIOL7.7e-89100.Uncharacterized protein OS=Spi... [more]
A0A0J8BVD2_BETVU5.0e-8090.3Uncharacterized protein OS=Bet... [more]
C6SZU0_SOYBN2.3e-7787.1Uncharacterized protein OS=Gly... [more]
A0A151U9W1_CAJCA6.8e-7785.9NudC domain-containing protein... [more]
A0A0B2PF32_GLYSO8.9e-7786.5NudC domain-containing protein... [more]
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BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NUDC2_HUMAN8.7e-1738.1NudC domain-containing protein... [more]
NUDC2_MOUSE8.7e-1738.1NudC domain-containing protein... [more]
NUDC2_RAT8.7e-1738.1NudC domain-containing protein... [more]
NUDC1_DANRE2.3e-928.9NudC domain-containing protein... [more]
BOB1_ARATH3.0e-924.0Protein BOBBER 1 OS=Arabidopsi... [more]
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BLAST of Spo21002.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G58740.15.0e-7985.9HSP20-like chaperones superfam... [more]
AT5G53400.11.7e-1024.0HSP20-like chaperones superfam... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007052CS domainPFAMPF04969CScoord: 21..93
score: 6.2
IPR007052CS domainPROFILEPS51203CScoord: 16..104
score: 16
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 19..149
score: 3.2
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 20..135
score: 1.55
NoneNo IPR availablePANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 1..156
score: 3.4
NoneNo IPR availablePANTHERPTHR12356:SF18NUDC DOMAIN-CONTAINING PROTEIN 2coord: 1..156
score: 3.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006167 AMP biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0006979 response to oxidative stress
biological_process GO:0033388 putrescine biosynthetic process from arginine
biological_process GO:0006560 proline metabolic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0009414 response to water deprivation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0046786 viral replication complex formation and maintenance
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009735 response to cytokinin
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006166 purine ribonucleoside salvage
biological_process GO:0006972 hyperosmotic response
biological_process GO:0006508 proteolysis
biological_process GO:0010200 response to chitin
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0046836 glycolipid transport
biological_process GO:0006952 defense response
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019521 D-gluconate metabolic process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0010337 regulation of salicylic acid metabolic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0000165 MAPK cascade
biological_process GO:0044211 CTP salvage
biological_process GO:0050832 defense response to fungus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006096 glycolytic process
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0006007 glucose catabolic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0033587 shikimate biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0007033 vacuole organization
biological_process GO:0055085 transmembrane transport
biological_process GO:0009651 response to salt stress
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0007030 Golgi organization
biological_process GO:0006816 calcium ion transport
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009987 cellular process
biological_process GO:0016043 cellular component organization
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0015031 protein transport
biological_process GO:0009853 photorespiration
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0008152 metabolic process
biological_process GO:0044206 UMP salvage
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0006621 protein retention in ER lumen
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0015886 heme transport
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0043087 regulation of GTPase activity
biological_process GO:0016120 carotene biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0007165 signal transduction
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005768 endosome
cellular_component GO:0005576 extracellular region
cellular_component GO:0000785 chromatin
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005777 peroxisome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016020 membrane
cellular_component GO:0010008 endosome membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0009705 plant-type vacuole membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0000502 proteasome complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
molecular_function GO:0016874 ligase activity
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0005488 binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0016881 acid-amino acid ligase activity
molecular_function GO:0046923 ER retention sequence binding
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005515 protein binding
molecular_function GO:0003856 3-dehydroquinate synthase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0004849 uridine kinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0051996 squalene synthase activity
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0051861 glycolipid binding
molecular_function GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity
molecular_function GO:0008194 UDP-glycosyltransferase activity
molecular_function GO:0050661 NADP binding
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0004001 adenosine kinase activity
molecular_function GO:0004668 protein-arginine deiminase activity
molecular_function GO:0047632 agmatine deiminase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004310 farnesyl-diphosphate farnesyltransferase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0047617 acyl-CoA hydrolase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0015439 heme-transporting ATPase activity
molecular_function GO:0004324 ferredoxin-NADP+ reductase activity
molecular_function GO:0017089 glycolipid transporter activity
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0045435 lycopene epsilon cyclase activity
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
RNA-Seq Expression