Spo24847.1 (mRNA) | SpinachBase

Overview


Name	Spo24847.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Phytosulfokines 3 (Phytosulfokine-alpha) (PSK-alpha) (Phytosulfokine-a) (Phytosulfokine-beta) (PSK-beta) (Phytosulfokine-b) (Precursor)
Location	SpoScf_00403 : 431311 .. 433562 (+)
Sequence length	1530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATGAGGGGATGAGAGCCTTCATCAAACGTGGATTATCTTAAAATAGATTAGATTGTATGATATCCAGTGGGAAGGAAATCAACGATTTAGCTTAAATTAATATCCGCCGCAAGTTTTTATTGCTAAATATAAGAATTTGCATGCTAATTTAATTAAAAGTTCGTTATCTAATTAATTAATTAGATTCTCACACCATCTGTCTTTCTAAGGTTCACACCAGCCCATACCAACCGTACGTTATTTCAGGCCCTATATAAACTCCCTATCTCTCTCTCTCCTTATAATCTCACACCCAATTCTTCAACATATTTCAAAGAGCCAAAGAAAAACAAAGTTGTATAAAATTAATTCATTATAATTAATTAATTAATTGATTATAATAATGGCAAAATTCAGCACCCTTTTTATTATAGCTCTCCTTGTTTGCTCCATCACTCTTATACATGCAGCTCGTCCTACGCCAGAATCTCAGCCTGCGGTAATAATTCTTACTTTTCATATTCGATTTTAATAAGAGTGTTTGGTTTGGAGTAAAACGTTTTCGTGGAAAAATGAGTTTTCCGTTCTCAATGCCTTTAGGTTGTTTGTTTTAAAATGGGATGGAAAATAATTTTTCGATAACTCTTTCAAGGATGAAAAATATTTTTCATTTGAACTATTTGAAAATGAAACTATTTTTTCTCTTTTCTGTCTTTCCATCCAGTGGCGAAGCTAGGGGGTGACGGGTAGGGTCATCCACTTCCCCAAGATTTTAAAAATAGTTGTAAAGAGTGTTTTGATAGAGCTTTGTGTGCATTTGCTTTGAGTTCAATTTCAAGCAAACACAATTTTATTTAATAATTTCTGACTCCGCCATTGTTCCCATCAATCCTCATCCATATACTCCCATTTTCTTTCCTCTATAAATTTTCTCGTAAAGAACCAAGCAAGGAAATGAGTGTGGAATTATGTTTTTCCCTCGAAAAATGTTTTCCACTAAAATTAATTTTTCATTGAAAATGTACTACACCAAATCACACGAAGCCTAACATACATGTTCTTTGCATGAATTAACATATAGTACTTACTCTCTCTGTCCGAAATTAATTGTTATGCATTGTTTGATACTCGAACATTTAATAGTATTATAATGTTATGCCATTTTACTAATTAGAAAATGGATGATTAATAACTAATCTTGATATAAAACATGACATGCAGGCAACACAGATGTTGAACAAGGCTGATATTTCTGATGACTGTAGTCCTGGAGAACAAGAAGAAGACTGCTTGGTGAGGAGGGAACTCGTGGCTCATACTGATTATATCTACACTCAGTCACAAAATCCTTGAACTAATATTAATTAATTAAGTTGATCGTTTGTATTATTAATGTAGTAACCTCGATAAATATACATCAATATCAATTCATGATGAATTGATGACCTTAATTTCACAAAATGTAACGGCGGCACATAAATTAAAGAATCTCATTTGTTGAATAACTTTGTGTACACATTTTGACCAATTTTACATTTACTAAGCCTCTATTTGGCACAATCTTTCTATTTTTAATCATTTTACGTACGATTTTGTTTGGTTTGACAAGGATAAAAATCATTTTTGAAAATATTTTACGCCAAATCAAACAAAGCCATAAATGAATTATACAAAGTCATGTACCAACACTTGTAAAAGAAAACGCCGATTATAGTTATCATTTTACACAATTTAATGGTGATTCCATGTCACAACCTCAATCTAATGAACGGCAGCGTCGAACGCCATGATTATAGGCCGGGTCATGTTCAACTTCTCAAAATCAGATCTTCAAGTCATTATGTAAATCAAACTGATAGATTATATGTAAATATTATTCACATTATTTTGTAATCTTGTATTTTCGGAGAATTTCATCAGAATTGTACGGGAACGGATCGCCCCATCCCTTTATCCACCAGCTTAGTCTGAGGAGGATCAGGTCTTGGAGTTGACCAAGTGTATTGGATTTGTTTTCAAAGATTCTTGTGTTTCTCTCCTTCCATATAGTCCATACTGTAATGAAGAAGACGGCCACCCATATTTTCTTGAAAAAGCCTCCCTTGCTTGGAAAGACCCACTGATCAAAGGCGGCTCTAATGGTGGCAGGGAACACCCACCGGAAACCCCATAAATCAAGCCACCATATCCATAATTGCCGAGAGGTAATGCAATGCAGTAGCAAATGATTGTAATCTTGTATTTTAGGTTAGCATATATTTAATCATTAG

mRNA sequence

ATTATGAGGGGATGAGAGCCTTCATCAAACGTGGATTATCTTAAAATAGATTAGATTGTATGATATCCAGTGGGAAGGAAATCAACGATTTAGCTTAAATTAATATCCGCCGCAAGTTTTTATTGCTAAATATAAGAATTTGCATGCTAATTTAATTAAAAGTTCGTTATCTAATTAATTAATTAGATTCTCACACCATCTGTCTTTCTAAGGTTCACACCAGCCCATACCAACCGTACGTTATTTCAGGCCCTATATAAACTCCCTATCTCTCTCTCTCCTTATAATCTCACACCCAATTCTTCAACATATTTCAAAGAGCCAAAGAAAAACAAAGTTGTATAAAATTAATTCATTATAATTAATTAATTAATTGATTATAATAATGGCAAAATTCAGCACCCTTTTTATTATAGCTCTCCTTGTTTGCTCCATCACTCTTATACATGCAGCTCGTCCTACGCCAGAATCTCAGCCTGCGGCAACACAGATGTTGAACAAGGCTGATATTTCTGATGACTGTAGTCCTGGAGAACAAGAAGAAGACTGCTTGGTGAGGAGGGAACTCGTGGCTCATACTGATTATATCTACACTCAGTCACAAAATCCTTGAACTAATATTAATTAATTAAGTTGATCGTTTGTATTATTAATGTAGTAACCTCGATAAATATACATCAATATCAATTCATGATGAATTGATGACCTTAATTTCACAAAATGTAACGGCGGCACATAAATTAAAGAATCTCATTTGTTGAATAACTTTGTGTACACATTTTGACCAATTTTACATTTACTAAGCCTCTATTTGGCACAATCTTTCTATTTTTAATCATTTTACGTACGATTTTGTTTGGTTTGACAAGGATAAAAATCATTTTTGAAAATATTTTACGCCAAATCAAACAAAGCCATAAATGAATTATACAAAGTCATGTACCAACACTTGTAAAAGAAAACGCCGATTATAGTTATCATTTTACACAATTTAATGGTGATTCCATGTCACAACCTCAATCTAATGAACGGCAGCGTCGAACGCCATGATTATAGGCCGGGTCATGTTCAACTTCTCAAAATCAGATCTTCAAGTCATTATGTAAATCAAACTGATAGATTATATGTAAATATTATTCACATTATTTTGTAATCTTGTATTTTCGGAGAATTTCATCAGAATTGTACGGGAACGGATCGCCCCATCCCTTTATCCACCAGCTTAGTCTGAGGAGGATCAGGTCTTGGAGTTGACCAAGTGTATTGGATTTGTTTTCAAAGATTCTTGTGTTTCTCTCCTTCCATATAGTCCATACTGTAATGAAGAAGACGGCCACCCATATTTTCTTGAAAAAGCCTCCCTTGCTTGGAAAGACCCACTGATCAAAGGCGGCTCTAATGGTGGCAGGGAACACCCACCGGAAACCCCATAAATCAAGCCACCATATCCATAATTGCCGAGAGGTAATGCAATGCAGTAGCAAATGATTGTAATCTTGTATTTTAGGTTAGCATATATTTAATCATTAG

Coding sequence (CDS)

ATGGCAAAATTCAGCACCCTTTTTATTATAGCTCTCCTTGTTTGCTCCATCACTCTTATACATGCAGCTCGTCCTACGCCAGAATCTCAGCCTGCGGCAACACAGATGTTGAACAAGGCTGATATTTCTGATGACTGTAGTCCTGGAGAACAAGAAGAAGACTGCTTGGTGAGGAGGGAACTCGTGGCTCATACTGATTATATCTACACTCAGTCACAAAATCCTTGA

Protein sequence

MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDCLVRRELVAHTDYIYTQSQNP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24847	Spo24847	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24847.1	Spo24847.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24847.1.exon.1	Spo24847.1.exon.1	exon
Spo24847.1.exon.2	Spo24847.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24847.1.utr5p.1	Spo24847.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24847.1.CDS.1	Spo24847.1.CDS.1	CDS
Spo24847.1.CDS.2	Spo24847.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24847.1.utr3p.1	Spo24847.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo24847.1 vs. NCBI nr
Match: gi|902143104|gb|KNA04820.1| (hypothetical protein SOVF_196180 [Spinacia oleracea])

HSP 1 Score: 151.0 bits (380), Expect = 8.400e-34
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDCLVRRE 60
          MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDCLVRRE
Sbjct: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDCLVRRE 60

Query: 61 LVAHTDYIYTQSQNP 76
          LVAHTDYIYTQSQNP
Sbjct: 61 LVAHTDYIYTQSQNP 75

[Close]

BLAST of Spo24847.1 vs. NCBI nr
Match: gi|23466395|tpg|DAA00288.1| (TPA_exp: putative phytosulfokine peptide precursor [Mesembryanthemum crystallinum])

HSP 1 Score: 75.5 bits (184), Expect = 4.500e-11
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCS-PGEQEEDCLVRR 60
          M+K +TL +IALLVCSITLI+A RP P S     +    A++ ++ S  G  +E+CL+RR
Sbjct: 1  MSKLTTLLVIALLVCSITLINAGRPNPTSLINEGKETEHAEMDENESCQGLNDEECLMRR 60

Query: 61 ELVAHTDYIYTQSQNP 76
           LVAHTDYIYTQ  NP
Sbjct: 61 TLVAHTDYIYTQHHNP 76

[Close]

BLAST of Spo24847.1 vs. NCBI nr
Match: gi|727466951|ref|XP_010515341.1| (PREDICTED: phytosulfokines 3 [Camelina sativa])

HSP 1 Score: 72.0 bits (175), Expect = 4.900e-10
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQ-----EEDC 60
          MAKF+T+FIIALL+CS TL +AAR TP +  A+++  +  +I  D    E      EE+C
Sbjct: 1  MAKFTTIFIIALLLCS-TLTYAARLTPTATTASSRENSVKEIEGDMVEEESCNGIGEEEC 60

Query: 61 LVRRELVAHTDYIYTQSQNP 76
          L+RR LV HTDYIYTQ+  P
Sbjct: 61 LIRRSLVVHTDYIYTQNHKP 79

[Close]

BLAST of Spo24847.1 vs. NCBI nr
Match: gi|731328501|ref|XP_010675086.1| (PREDICTED: phytosulfokines-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 71.2 bits (173), Expect = 8.400e-10
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVC-SITLIHAARPTPESQPAATQMLN-KADISDDCSPGEQEEDCLVR 60
          M+K +TL IIALLVC + T+ +AARP P  +    +  N K D ++ C  G  EE+CL+R
Sbjct: 1  MSKCTTLLIIALLVCFASTVTYAARPIPAFRHKDMEFENLKVDDNESCQ-GVNEEECLMR 60

Query: 61 RELVAHTDYIYTQSQNP 76
          R LVAHTDYIYTQ QNP
Sbjct: 61 RTLVAHTDYIYTQHQNP 76

[Close]

BLAST of Spo24847.1 vs. NCBI nr
Match: gi|727444268|ref|XP_010503644.1| (PREDICTED: phytosulfokines 3-like [Camelina sativa])

HSP 1 Score: 70.5 bits (171), Expect = 1.400e-9
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQ-----EEDC 60
          MAKF+T+FIIALL+CS TL +AAR TP +  A+++  +  +I  D    E      EE+C
Sbjct: 1  MAKFTTIFIIALLLCS-TLTYAARLTPTATTASSRENSVKEIEGDMVEEESCNGIGEEEC 60

Query: 61 LVRRELVAHTDYIYTQSQNP 76
           +RR LV HTDYIYTQ+  P
Sbjct: 61 FIRRSLVVHTDYIYTQNHKP 79

[Close]

BLAST of Spo24847.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QC37_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_196180 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.800e-34
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDCLVRRE 60
          MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDCLVRRE
Sbjct: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDCLVRRE 60

Query: 61 LVAHTDYIYTQSQNP 76
          LVAHTDYIYTQSQNP
Sbjct: 61 LVAHTDYIYTQSQNP 75

[Close]

BLAST of Spo24847.1 vs. UniProtKB/TrEMBL
Match: Q7PCA5_MESCR (Putative phytosulfokine peptide OS=Mesembryanthemum crystallinum GN=PSK1 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.100e-11
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCS-PGEQEEDCLVRR 60
          M+K +TL +IALLVCSITLI+A RP P S     +    A++ ++ S  G  +E+CL+RR
Sbjct: 1  MSKLTTLLVIALLVCSITLINAGRPNPTSLINEGKETEHAEMDENESCQGLNDEECLMRR 60

Query: 61 ELVAHTDYIYTQSQNP 76
           LVAHTDYIYTQ  NP
Sbjct: 61 TLVAHTDYIYTQHHNP 76

[Close]

BLAST of Spo24847.1 vs. UniProtKB/TrEMBL
Match: D7LSY3_ARALL (ATPSK4 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906292 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.300e-9
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQ-----EEDC 60
          MAKF+T+FI+ALL+CS TL +AAR TP +  A+++  +  +I  D    E      EE+C
Sbjct: 1  MAKFTTIFIMALLLCS-TLTYAARLTPTTTTASSRENSVKEIEGDNVEEESCIGIGEEEC 60

Query: 61 LVRRELVAHTDYIYTQSQNP 76
          L+RR LV HTDYIYTQ+  P
Sbjct: 61 LIRRSLVVHTDYIYTQNHKP 79

[Close]

BLAST of Spo24847.1 vs. UniProtKB/TrEMBL
Match: R0HIL1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018336mg PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.700e-9
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQ-----EEDC 60
          M KF+T+FI+ALL+CS TL +AAR TP +  A+++ ++  +I  D +  E      EE+C
Sbjct: 1  MTKFTTIFIVALLLCS-TLTYAARLTPTTATASSRDISVKEIEADKAEEESCNGIGEEEC 60

Query: 61 LVRRELVAHTDYIYTQS 73
          L+RR LVAHTDYIYTQ+
Sbjct: 61 LIRRTLVAHTDYIYTQN 76

[Close]

BLAST of Spo24847.1 vs. UniProtKB/TrEMBL
Match: R0EUY1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027468mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.900e-9
Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 1


		  
Query: 1  MAKFSTLF--IIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDC-LV 60
          MAKF+T+F  IIALL+CS     +ARPTP S       + K +  D+   G  EE+C L+
Sbjct: 1  MAKFNTIFFFIIALLICSTLTYTSARPTPTSVYPEEISIKKLEQGDENCEGVGEEECVLI 60

Query: 61 RRELVAHTDYIYTQSQNP 76
          RR LVAHTDYIYTQ+ +P
Sbjct: 61 RRTLVAHTDYIYTQNHSP 78

[Close]

BLAST of Spo24847.1 vs. ExPASy Swiss-Prot
Match: PSK3_ARATH (Phytosulfokines 3 OS=Arabidopsis thaliana GN=PSK3 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 5.800e-11
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDD------CSPGEQEED 60
          M KF+T+FI+ALL+CS TL +AAR TP +  A ++  +  +I  D      C+ G  EE+
Sbjct: 1  MGKFTTIFIMALLLCS-TLTYAARLTPTTTTALSRENSVKEIEGDKVEEESCN-GIGEEE 60

Query: 61 CLVRRELVAHTDYIYTQSQNP 76
          CL+RR LV HTDYIYTQ+  P
Sbjct: 61 CLIRRSLVLHTDYIYTQNHKP 79

[Close]

BLAST of Spo24847.1 vs. ExPASy Swiss-Prot
Match: PSK5_ARATH (Phytosulfokines 5 OS=Arabidopsis thaliana GN=PSK5 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.100e-8
Identity = 41/78 (52.56%), Postives = 48/78 (61.54%), Query Frame = 1


		  
Query: 1  MAKFST-LFIIALLVCSITLIHA-ARPTPESQPAATQMLNKADISDDCSPGEQEEDC-LV 60
          M KF+T L IIALL+CS TL HA AR  P S         K +  +    G  EE+C L+
Sbjct: 1  MVKFTTFLCIIALLLCS-TLTHASARLNPTSVYPEENSFKKLEQGEVICEGVGEEECFLI 60

Query: 61 RRELVAHTDYIYTQSQNP 76
          RR LVAHTDYIYTQ+ NP
Sbjct: 61 RRTLVAHTDYIYTQNHNP 77

[Close]

BLAST of Spo24847.1 vs. ExPASy Swiss-Prot
Match: PSK4_ARATH (Putative phytosulfokines 4 OS=Arabidopsis thaliana GN=PSK4 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.000e-8
Identity = 36/85 (42.35%), Postives = 45/85 (52.94%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPE------SQPAATQMLNKAD-----ISDDCSPG 60
          MA  STL  IALL+C+  L  +ARP P       + PA T  L   +     ++ +    
Sbjct: 1  MANLSTLITIALLLCATMLTCSARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDK 60

Query: 61 EQEEDCLVRRELVAHTDYIYTQSQN 75
          E +EDCLVRR L AH DYIYT   N
Sbjct: 61 EDDEDCLVRRTLTAHLDYIYTHKNN 85

[Close]

BLAST of Spo24847.1 vs. ExPASy Swiss-Prot
Match: PSK_ASPOF (Phytosulfokines OS=Asparagus officinalis GN=PSK PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.000e-7
Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 1


		  
Query: 2  AKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDDCSPGEQEEDCLVRREL 61
          +K  TL +IALL  S++L  AARP   +    +  +    + D+   G  EE+CL+RR L
Sbjct: 3  SKAITLLLIALLF-SLSLAQAARPLQPADSTKSVHVIPEKVHDEACEGVGEEECLMRRTL 62

Query: 62 VAHTDYIYTQSQNP 76
           AH DYIYTQ  NP
Sbjct: 63 TAHVDYIYTQDHNP 75

[Close]

BLAST of Spo24847.1 vs. ExPASy Swiss-Prot
Match: PSK4_ORYSJ (Phytosulfokines 4 OS=Oryza sativa subsp. japonica GN=PSK4 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.800e-7
Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 1


		  
Query: 2  AKFSTLFIIALLVCSITLIHAARPTPESQ--PAATQMLNKADISDDCSPGEQEEDCLVRR 61
          A  + L I A    S T+  A RPTP +     A Q   +++I   C  GE EE+CL RR
Sbjct: 10 AALAVLLIFA--ASSATVAMAGRPTPTTSLDEEAAQAAAQSEIGGGCKEGEGEEECLARR 69

Query: 62 ELVAHTDYIYTQSQN 75
           L AHTDYIYTQ  +
Sbjct: 70 TLTAHTDYIYTQQHH 82

[Close]

BLAST of Spo24847.1 vs. TAIR (Arabidopsis)
Match: AT3G49780.1 (phytosulfokine 4 precursor)

HSP 1 Score: 67.8 bits (164), Expect = 3.300e-12
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISDD------CSPGEQEED 60
          M KF+T+FI+ALL+CS TL +AAR TP +  A ++  +  +I  D      C+ G  EE+
Sbjct: 1  MGKFTTIFIMALLLCS-TLTYAARLTPTTTTALSRENSVKEIEGDKVEEESCN-GIGEEE 60

Query: 61 CLVRRELVAHTDYIYTQSQNP 76
          CL+RR LV HTDYIYTQ+  P
Sbjct: 61 CLIRRSLVLHTDYIYTQNHKP 79

[Close]

BLAST of Spo24847.1 vs. TAIR (Arabidopsis)
Match: AT5G65870.1 (phytosulfokine 5 precursor)

HSP 1 Score: 59.3 bits (142), Expect = 1.200e-9
Identity = 41/78 (52.56%), Postives = 48/78 (61.54%), Query Frame = 1


		  
Query: 1  MAKFST-LFIIALLVCSITLIHA-ARPTPESQPAATQMLNKADISDDCSPGEQEEDC-LV 60
          M KF+T L IIALL+CS TL HA AR  P S         K +  +    G  EE+C L+
Sbjct: 1  MVKFTTFLCIIALLLCS-TLTHASARLNPTSVYPEENSFKKLEQGEVICEGVGEEECFLI 60

Query: 61 RRELVAHTDYIYTQSQNP 76
          RR LVAHTDYIYTQ+ NP
Sbjct: 61 RRTLVAHTDYIYTQNHNP 77

[Close]

BLAST of Spo24847.1 vs. TAIR (Arabidopsis)
Match: AT4G37720.1 (phytosulfokine 6 precursor)

HSP 1 Score: 57.8 bits (138), Expect = 3.400e-9
Identity = 36/85 (42.35%), Postives = 45/85 (52.94%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPE------SQPAATQMLNKAD-----ISDDCSPG 60
          MA  STL  IALL+C+  L  +ARP P       + PA T  L   +     ++ +    
Sbjct: 1  MANLSTLITIALLLCATMLTCSARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDK 60

Query: 61 EQEEDCLVRRELVAHTDYIYTQSQN 75
          E +EDCLVRR L AH DYIYT   N
Sbjct: 61 EDDEDCLVRRTLTAHLDYIYTHKNN 85

[Close]

BLAST of Spo24847.1 vs. TAIR (Arabidopsis)
Match: AT2G22860.1 (phytosulfokine 2 precursor)

HSP 1 Score: 54.7 bits (130), Expect = 2.900e-8
Identity = 36/85 (42.35%), Postives = 46/85 (54.12%), Query Frame = 1


		  
Query: 1  MAKFSTLFIIALLVCSITLIHAARPTPESQPAATQMLNKADISD------------DCSP 60
          MA  S L  IALL+CS TL+  ARP P    + T   +  ++              D + 
Sbjct: 1  MANVSALLTIALLLCS-TLMCTARPEPAISISITTAADPCNMEKKIEGKLDDMHMVDENC 60

Query: 61 GEQEEDCLVRRELVAHTDYIYTQSQ 74
          G  +EDCL+RR LVAHTDYIYTQ +
Sbjct: 61 GADDEDCLMRRTLVAHTDYIYTQKK 84

The following BLAST results are available for this feature:

BLAST of Spo24847.1 vs. NCBI nr
BLAST of Spo24847.1 vs. UniProtKB/TrEMBL
BLAST of Spo24847.1 vs. ExPASy Swiss-Prot
BLAST of Spo24847.1 vs. TAIR (Arabidopsis)

BLAST of Spo24847.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902143104\|gb\|KNA04820.1\|	8.4e-34	100.	hypothetical protein SOVF_1961...	[more]
gi\|23466395\|tpg\|DAA00288.1\|	4.5e-11	53.9	TPA_exp: putative phytosulfoki...	[more]
gi\|727466951\|ref\|XP_010515341.1\|	4.9e-10	51.2	PREDICTED: phytosulfokines 3 [...	[more]
gi\|731328501\|ref\|XP_010675086.1\|	8.4e-10	54.5	PREDICTED: phytosulfokines-lik...	[more]
gi\|727444268\|ref\|XP_010503644.1\|	1.4e-9	50.0	PREDICTED: phytosulfokines 3-l...	[more]

BLAST of Spo24847.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QC37_SPIOL	5.8e-34	100.	Uncharacterized protein OS=Spi...	[more]
Q7PCA5_MESCR	3.1e-11	53.9	Putative phytosulfokine peptid...	[more]
D7LSY3_ARALL	1.3e-9	50.0	ATPSK4 OS=Arabidopsis lyrata s...	[more]
R0HIL1_9BRAS	1.7e-9	50.6	Uncharacterized protein OS=Cap...	[more]
R0EUY1_9BRAS	2.9e-9	51.2	Uncharacterized protein OS=Cap...	[more]

BLAST of Spo24847.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PSK3_ARATH	5.8e-11	49.3	Phytosulfokines 3 OS=Arabidops...	[more]
PSK5_ARATH	2.1e-8	52.5	Phytosulfokines 5 OS=Arabidops...	[more]
PSK4_ARATH	6.0e-8	42.3	Putative phytosulfokines 4 OS=...	[more]
PSK_ASPOF	1.0e-7	43.2	Phytosulfokines OS=Asparagus o...	[more]
PSK4_ORYSJ	1.8e-7	44.0	Phytosulfokines 4 OS=Oryza sat...	[more]

BLAST of Spo24847.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G49780.1	3.3e-12	49.3	phytosulfokine 4 precursor	[more]
AT5G65870.1	1.2e-9	52.5	phytosulfokine 5 precursor	[more]
AT4G37720.1	3.4e-9	42.3	phytosulfokine 6 precursor	[more]
AT2G22860.1	2.9e-8	42.3	phytosulfokine 2 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009438	Phytosulfokine	PFAM	PF06404	PSK	coord: 38..74 score: 2.5
None	No IPR available	PANTHER	PTHR33285	FAMILY NOT NAMED	coord: 1..75 score: 6.5
None	No IPR available	PANTHER	PTHR33285:SF1	GROWTH FACTOR PROTEIN-RELATED	coord: 1..75 score: 6.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell proliferation
biological_process	GO:0040007	growth
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0031012	extracellular matrix
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0008083	growth factor activity