Spo03618 (gene)

Overview
NameSpo03618
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr2 : 416993 .. 428018 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTATCACTGTGGAGAGAAAGCTGCTGGTGAGGAGGCGGCGGCGATGCGGTGGCGAGGCGCGCAAGGCGCTGGGCGATGCGATGCGAAGGTCCGGTTCTGTTTGATTTTAACTCTTTTTAATTTAAATTTGCTTTAATTGGGTGATATTTGTTGTTAATATTCTGGGTTTGTCAATTATTTGTATGTTGCTTGAATTGACGTTGTTTTAATTTGGTGAGATTTTTGAGGGTTTCAGGAAACAATGTGAAGTCACCCCGTCCAGGGAGCTGTATGTTAGAAATTGGGGTATTCGATTTTTTAGGGTTTCATGTTTGAAATTGAACTCAATTTGAGGATATCAAGTTATTGTTTTGATGCCTTGACGAAGGTAATCCCAATATTTTAGCTTCTAGGTGATTGAAGATGAGGGTTTCTTGGCTGAAATTGATCACAATTTGGGGATTTTAGTTAGTTTATATGATTTTGGCTTCTGGTAATAGATAAAAGTAGGGTTTCAAAAATGTAATTTATACCATTTATATTTGGTGATTACTGGGTTTATATTGAATTTTTTTCTGGTCTTAATTTCGTTGTTCAATTTTTAATGAACATAGGGTGTTAAGTTCAAAATATGCGATGAACATAGGGTGTTAAGTTCAATGAATTTTGCGTGCATGAACTTTATTTGTTAAGTTCCACTGTCAGTTCTTAGGGTGTCTTGAAATCAAAGAATTAAGAGTCTAGACTATGGATGTCTTATAATCTTTGAGAATTTGCAAGATTAAACTTTATTTGTTATGTTGTTATGCGATGCGTGCGAGACAATTCATTAAATCAAAGAATTAAGTTCCACTATCAGTTCTTAGGGTGTCTTGAAATGAAAGAATTAATTTGAATATTTTGAATTTAACAAATAAAATTAACACCACTGGGTTTAATGAATTTCGCGTGCATGAACTTTATTTGTTAAGTTCCAGTGTCAGTTCTTAGGGTGTCTTGAAATCAAAGAATTAAGAGTCTAGACTCTGGATTCTTGAAAACTGTATTTTCATGCTTGATGCTTCTAGCATCTCTGATGGTTAGTCTGGTTTTTTAACTGAATCAGCTGTATGGCTAAAATTCTGAGTTGTACTTGATTTCGTAATTTAAAAAACTGATACTAATCTTTGACATTTGTTAGTGGTAATGATATTTATTTGAAAATTAATGAAGTAAATTAAATTTCTAGCTATTTGTCCTACCAATAAAATTTGAAAATAACAGCATATTTTTTGAAATAAAAGCATGAACATCGATCTGTAATAATTAATTGAAATCAATAAAATCATGCATATTACTATTTGGTTTGAGATATTGATGGGTGCATACCTTACTCTGTTGGTTATTGTATGCCTTGACGAACTTGACACCCAACTTGCGAACTTTAAACGGTTATTCTGATCTGCATAAACCATGAATTATTGTCAAGTACTTAATATTTTGTCAATAAAATATGAAATTAGAGATTTAAATCAAATAAGAAATTATTTAATCAAAAACATTAATTAAAATATGAAATAATTTATTAAACATTAATTTTGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACAAAAAAAAAAAAAACTAAAACAGACACCATATCGATTTTCTTCTCCCCCAAGCTGAGAGGGTGTACGTTAAGGGTGTTTACTAACGTGCGCCACCTTCACCAATGGCGAAGAAGAAGAAGGCTAGCTTGATTGTAACTTCACCAATGGCTTCGGAGGATGTTTCCGCTCAGTCTAACCCTAGAAATGAGTCTCTTTTGGTTCCAGAAGGGGGCCAAAAATCGAACCCATCTGCTGCAAATAGCGCGACGAACTCTGAGAATGAAGAACTTGTTTACTCCAATCTAGTGCACTCCTCGGCTGGTATGATTCCTAAAGCTCTTCATGACACCATTATTGCTTTGAATCAATCGTTGGGGCTCACTGGGGAGGGGAATTTGATTCCTCAGTGTAGTACGGACTCTGTTTTTCGAAACTCTGGTCATGTGGGTGTTATTGGTCAACCATTGAAGCATCAAGCTTCTCCTAGTGGTTCGACACAGGTTCCTAAGGAGGGGGGAACTGTTAAGGAACCATGGGTGAATCTATTTGCTGGGGCTAAGCTTGCTTCCAAAGGAGCTCCCCTGGAATTTGTGACACCTTTGGTTAAAGATGGGAAAAAAGTAGCACAACTGCAGCAATCTGAGCTTGCCACTATGGCTGATAAATGGCAAGCCTCTTTAGTTATGTATGTTGTAGGAGAATCACCAACTTTGGCCTCTGTAAGGAGATTTATGGCTGCTGTGTGGAGTGAAGTTTCTACTCCTCAAGTGTTTTTTCATGATGAAGGGTACTTTATCATTAGATTTGAGTGCATTGAGGATAAGAATCGCATTGTTGCAGGGGGTCCTTACACCTTTTATGGTAAGCCAGTGATCATTAAGCCATGGGCAGCAGATTTCAACTTCTATGAGGAGGTTCTCAAAGTGATTCCCTTGTGGGTTAAATTTCCTAATTTGCCTTTGCATTGCTGGGGGAGTGATTCTCTCAGTAGGATCAGTAGTTTGTTGGGGGTTCCCTTGTGTGCTGATGAGTGTACAACAAAGCAGGAGAGAGTTTCATTTGCCAGGGTTTTGATTGAGATGGATATTACTACTGTGTTACCAGACCATGTTTGGATTGAAGATGCTAGGGGAGTTGTGTTCAAACAGGCTGTAGTGTATGATTGGAAACCCCTCTATTGTAAAAAGTGCAATACAGCAGGCCATGATTGTACCAAGCCCTCTAATGTAGCTCCTAAACCAGCTGTAAAGAAGATTTGGGTGGCTAAGCCAACTCAGCAGCATGTTTCAGCCCCACAGCAACAGACAGGGGGGATCCTTACTCCCCATCATGATCCACCTGTAGTTCAAACTAGTGGTCAAGATTGGAACATTGTAACAAGGAGAACTAGGGGACCTAGCAGGATGAGGAATTTGAGCCCTAGTAATCCTTTCACTGTGCTTTCTGGTGATTTGGGATTCAAGGAGATATCTGGAGAAATGGATAGTGATGGTGTGATTGTGCAGAATACCTCACATGAACCTCATGAAGAAGGTTAACTTATGTACTTGGAATGTGAGAGGCTTTAATGATCCTGTTAAAGCTTCTGAGGTAAAGCATCTGTTGCAAGTTAACAATGTTAATATCATTGCTTTATTAGAAACTAGAGTAAAAATAGCTAAATTTCCTAGGTTGTCTTCTAAACTTGGTAGACACTGGAGTTGGGAGAACAATTATAGCTTGAATCCTAGAGGCAGGATCTGGTTGGGTTGGCAACAATCAGAAGTTGATCTGTCAATTCTGCATACTCATGAGCAGTTTTTGCACTGTGTGATTAGGGATAGAACTGGTGATATTTCTTTCTTCTTTACAGCAGTCTATGGTTTGCATACCATTGAAACTAGGAAGGATCTTTGGCACTCCCTTGTGCTTATTCTCCCTAGTGTTGGTTCTCACCCTTGGCTCTTATCTGGTGACTTTAATTCCCTCTTGTCTGACACTGATAGGATTAATGGCTCTCAGGTTTCTATTGCTGAAACCAAAGATTTTAATGAGTTCATTTTGACTGCTGGTCTTTGTCCCCTACAAAGTGTGGGTCACTATTTCTCATGGCATAAAGGTTCTGGTGATGGGAAAACAGCTAGTAGAATTGATTGGGGGCTTGGTAATGCTGGTTGGATCCATAAGTTTAGTGGTGTTCCTGTTCAATATCTCAACTCTTCCATTTCTGACCACTCTCCACTCTTGGTGAACTGTTTACCTGATAAAATGGAGGGAGGCAAACCTTTTAGATTCCTGAATTACCTTGCAGATCATAGTAAGTTTGCTTCTCTGATAGAGAATAGTTGGGGTACCAGAGGGAAAACAGGTTCTGCTATGTTTAGTTTGTGGTCTAATTTGAACCTTGTGAAGCACAAGTTGAAAGCTCTGCATTCTGAAGAGTTTGCTGGCATCAAAGAGAGAATTGAAATGGCTAGATCTCAGCTAGAGATAGTTCAAACCTCTCTTCAAACTACTCCTTCTCCTGAGTTGTTTGAACAAGAGAGAACTTTCACTGATAATTTGAGGAAATGGCTTAGGGTGGATGAAATTGCTTTGAGGCAAAAATCAAGAATTCAATGGCTCCAAGTGGGGGACTCTAATCACCATTTCTTCTTCTCTTCTATCAAGGAAAGGAATAGGCAAAACAGGATTACAGTTCTGTTTGATGATTGTGGAAACAAATTGGTTGAAGCTGATGCTATTCAGGGTGAAATTGTTGGTTTTTATAAAAAATTGCTTGGGTCAGCTGCTCAGTCCTTGCCTGCAGTTCACATTCCTACTTTGAGAAGTGGTAGTACTCTCAGTATTCCTGCTAAACAATGGCTATCCAGAGAGGTAACCACTTTAGAAATTGACCAAGCTCTTAAAGGGATTGGTGATGACAAAGCCCCTGGCCTTGATGGGTTCAATGCTGTTTTCTTTAAAAGAACTTGGCATGTTATTAAGGCTGATGTGTATAAAGCTGTACTTGAAGTTTTCAGAACTAACACTATGCTGCCTCAATTCAACTGTACTTCCATTACTCTTGTCCCTAAGGTTCCTAACCCTTCTAAGGTTAAGGATTTTAGGCCTATAGCTTGCTGTACTGTTATCTATAAGCTAGTGGCAAAGATTCTCACAACCAGGATGCAGAGTGTTATTGGTGATGTTGTGAATGAAGCTCAATCTGGCTTTATTCCTGGCAGGCAAATCTCTGATAATATTCTCCTAGCAACTGAGCTGATCAAAGGTTATACCAGAACTCACATCTCTCCAAGGTGTCTCATAAAGGTGGATTTGAAGAAAGCTTATGATTCCATTGAGTGGTCTTATCTGAAAAGTGTTATGGTGGAACTTGGGTTTCCTGTGTGCTTTGTGAGGTGGGTTTTCACCTGTATCTCTACTGTTTCTTATAGCATTTTGATCAATGGGAAGCCATCACAACCCTTCAGAGCAAAGAAGGGTTTGAGACAGGGTGATCCAATGTCTCCATTTCTCTTTGCTATTGGTATGGAATATCTTACAAGACACTTACAACAGCTGCAGAATTTGCCAGATTTCAATTTCCACCCTAAGTGTGAGAAGTTGGCCCTCACACACTTGATGTTTGCTGATGATCTTCTTATGTTCTCAAGAGCTGATACTCTGTCAGTTGAGATGCTTTTTGCTGCTTTCAATAATTTTTCAAGAGCTTCAGGTCTTGAAGCTAATTTGGACAAGAGTAACATTTACATTGGTGGGGTTTCTGCTGCTACCAAAGCTGCTATTCTTGATGCAGTTCATATTCCAGAGGGGCAATTTCCCTTTAGGTATCTTGGTGTTCCACTCTCTACTAAAAAACTGGTTTATAACCAATGCAGAACTTTGATTGACAAGGTGGTGGCTAGAGCTAAGTCTTGGACAGCTAGGCATCTCTCTTATGCTGGTAGACTTCAGTTGGTTCAAGCAATCTTGCTTAGTTTGCAAGCTTTCTGGTGTCAAATCTTTATTTTACCTAAGAAAGTGTTAAAGGAAATCCAGAACTTCTGTAGGATTTTCCTTTGGACTGGTCTTACTGATCCTTCCAAAAGATCCATGGTGGCATGGCACTCTCTTTGTCTTCCTAGAAGTGCTGGTGGGTGGAACCTTAAGGAAATGGGGTTATGGAATAAAGCTGCTGTGTCTAAGCTGCTTTGGGCTCTAACTCACAAAAAAGACAGATTGTGGAGCAGATGGGTTCACACCTATTACATTAAAAACAGGCCTCTTTCCACTCAATGGCCAGCTACAATCTCTTGGTCACTGAGGAAGATTCTGGATTCTCACACTCTGATTGATGATGTTGGTGGATGGGATGCTGTTGTGCAGAAAGGGAAATTCTCCATTAAATTGATGTATAAACATCTCCTTGGTGTTCATGACAAAGTTCCCTGGAAAAGAGTGGTCTGTAATAATAAAGCTTCCCCTAAGAGTGTGTTTATCACTTGGCTTGCACTGTGGAACAGACTTCCCACCAGAGATAGGCTGCTAGCTTGGAAGATTGTCACTGCTAACAGTTGTCCACTTTGCTCAACCATGCCTGAATCTACTGGTCACCTATTTTTTGAGTGCTCATATTCTGCTGCTGTGTGGGGAAAGATCCTTCAACAGTTGCAGTTTCACAGAAATCCTGCTCCATTTGATCAGGAACTTGCTTGGATATTGAAAGCTACTAAAAGAACTGGTGATAGATATAAATTGCTGCTGATGTTCTTCTCTGAAAGTGTTTATGGCATTTGGCTTCAGAGAAATGAGATGGTGTTTAACCAACAATGCAGAAGCCCTGCTGATTTAGTGCATGATATCCAGTTTAGGGTGGCTTGTAGGGCCACTGACAGTCAGAAGCTGCTATGCTGAGTTTGTGTTAGAGGTGTCCTTTTTTGCTAGTGTTTAGCTTTGTGCTTGTTGTTTTTGGTGTTCTGGTGGCTTGTGCCTAACACTGTGCTAGTTCTTTTACTAGCCCTCTCCTTTTGGTAATAAAATAACTTTATTTGCCAAAAAAAAAAAAAAAATCGGTTAAAACCATGCCTATTACTATTTTTTGTGTAAAAGATTGTTGGGGAAGATACCGTAAGTCGTTCTTTATTGTATCTCTTTATGTACTTCAAAACCAACTGAAAATCTGCATAAAAACCGATTCAAGTCAATTCTTTTTCAATTCATAATTCTATTAACACAAATTTACGTTATTTCTGTTAAACATAACTTATGTTTTGCAATCTGCAAATAGAGATTAAAAAAATTATATGAGATAATTTAATTAAAAGCATGAATTAAAATATGAAATAATTTATTAAAATCCACAAAAGCACGAAACTTACATACCTTATATTTTCAAATCTGTAAAATAAATAAACGAATAGTGTGTTAGGTAAGCATATTTAATTTACATAGCATAAAAATTCAAAAATTTTCGAATTATTATTATTAAATAATATTTCTTTAATTTGGCAATGCATATTCAAATCAGAAGAATGGCTATGAGAATAATATTTCTTTAACACATACCTTATACGGAGTATTTTTAAATCTGCAAAATAAATAAACAGGTAGTGTGTTAGGTAGACAGATTTAATTTACATAGCATAAAAATTCAAAAGAAGAATTTGTTTATGCATAAAAGTTTTCGAATCTGAAGAATGGCTCTGAATTAAATGGCTCTTATTCATGAATTTGTTTAAAAATTTAGATGTTTAATCTCTGTTGTTGTTATGCATTAAAATTCATGAATTAAAATAATTTGAAATTTGTTTAATTTTTATTTTTATTTTCAGGATTCGTGAGAAAAGTATACTTACGTTACGTGTGTGGGAGCGACTTCAAGAAGTATGGTGATATGGGGTTTTCGAGAATGGCGTTCTTCTGAGAATGATTTTTCAGTGCAGTAGGGTTTTTTTCGAGAATGGCGTTCTTCTGGAGAATTTTTCAGGCTTTTTGGTTTACTGGAGAATTTTAAAGAATTTTTTGTGTACTTGTGATTTTGTTTCCTGATTTGTAATAATTTTCAATTGTAATAATGTGTAGTATTTTCCTTAATTTTCTTTTTCTTTCCCGTTTTAACTCCTAATCAACCAAAATTGGGGTAATTGACATATAAAAGATTTTATTTGGGTACAGCAGTGATTGTACATTAAATGGGCCATTAATCACTTTTTGGGCGTTAGTAATTGGAATCAAATTGATCACTTCTGCCATACACTGTTAAACAACGAAGGGTATTTCTGTAAATTGCCTGGGGGACACGAAAAGTTAATTTACTTAAAAGCCCTCAGGAGCTGGCTTATATAATAGAGATTGAAACTCGTGCGATGCACGGGTTTGTCAATTTTCGTACATATTTGTCTCATTATATCATTGTATACAAATAGGTGTTTTATAAATTATACGTATAATAGAAAGTTAAAATAGGTCTCGTTTCAAGTTGGAGTATAAATGTGTTATTTATATTTAAAATGTTTATGCATAAGACCCTCATAGAAAACCGAGTTATGAAATGGTTAGTTCAATAACAGTAAAACTCGAGTTAGTTATTCAAGCCCGTGCGATGCACAAGTTTGTCAATTTTCGTACATATTGGTCTTATTATATCATCGTATACAAATAGGTATTTTATAAATTATACGTATAATAATAGAAAGTTAGAATAGGTCCCTTTTCAAGTTGGAGTTTAAATGTGTTCTTAATATTTGAAATATTTATGCATATCTTATTTTTTTTAAAGGGGATAATTGTATATATGTTTTTCTCATATTATCTTTAACTTAGTACTTATTTATCTTTTTATTCCCAGCAAATTGTATCTCTTATTATCCTTTATCGGGTAAAAATTTGAATAATATTGGTTAAATATTTATAGTAATGAGGATTCATCAGACCCAAAAAAAAATTGACGAAAAGAAAACACTATAGTATAGTTGGGGTGTTAGCATGATTGATTGTTGATTAAAATATTAATTATGCACTCTATTATAATTAGATTTATTATATATAAATTAAGATCGTTCTTAGTTTTTCGATTCCGTATTGAAATAATAGGAATTTCCCATGTATTGTTATCTTATTCAACCCCCACTATAGTGTTCTTTTTAAAAAAAATACTTCGTACTTTAGAAAGATCTGCCTCTCACGTAACTCTTTTTGTTTACAATTCTATCTTATTTTTTATAAAGGGGTTAATTGTATCTTTTTCTCTGATTATCTTTTACGTAGTACTTATTTATCTTTTTTATTCATATCAAAATTTATCCCTTATTATCTTTTATCGGGTAAAAATCTGAATAATATTAGTTAAATATTTATAGTAATAGTTTTGTAGCTTAGTAGAAATTTTGGAAATCTACAACTTTTAATTAAAAATTTCATGTTTAGGGGTTTAAAATTAAAATTACACTTCTATATTTTTTGGGCGGGTATTTACTTCGGACACATTTGCTTATCGGAGCTTTGGCTTAACACTAAATATTACTCGTAGTATATATATATATATATATATATATATATATATATGGATTTTTTGCCAAAAAGGACCTTTTATAAGCATTTTTTTGCGAGAAAGGACCTTTTATGTCAAAATTGGTGAAATATGACCTAAAATACAATATTTTTTGTTAAGTGGGACCTTTGCCCGGATTCTTGGAGTCAACCCAAGTTTCTGGCGTTGACTTCGACACGTGGCAGCCGGAAACTGCCACGTGTCAATATCCTTATTTTAAAAAAAAAAATTTATTTTTTTTCCCAAAAATCATCGTTTTACTGAAACAGTTTTACCCAAAAAAAAAAATCGATTCTCGATTCTCTTCTCTCTCCTCTGCTCCTTCAACTCGACGCCATTGTTGAAGATTCAAGGTTGAAGGAAAGTGCTTCTTCACTCAAATTGCTTGCCACGAATTGTTACTCAGGCCTCCACGAATCAGGTATGCTATTTCCCCCCCTCAAAATCCTCTTCAATTGTTGTAATTTTGGGTCGAAAAAATTAGGGTTCTTCCCAAATTTGGGGATTTTGTAATTCGTTGTGTATTTGTGTTTTAGATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTATTACTCATAANNNNNNNNNNATATATATATATATATATATATATATATATATATGGATTTTTTGCCAAAAAGGACCTTTTATAAGCATTTTTTTGCGAGAAAGGACCTTTTATGTCAAAATTGGTGAAATATGACCTAAAATACAATATTTTTTGTTAAGTGGGACCTTTGCCCGGATTCTTGGAGTCAACCCAAGTTTCTGGCGTTGACTTCGACACGTGGCAGCCGGAAACTGCCACGTGTCAATATCCTTATTTTAAAAAAAAAAATTTATTTTTTTTCCCAAAAATCATCGTTTTACTGAAACAGTTTTACCCAAAAAAAAAAATCGATTCTCGATTCTCTTCTCTCTCCTCTGCTCCTTCAACTCGACGCCATTGTTGAAGATTCAAGGTTGAAGGAAAGTGCTTCTTCACTCAAATTGCTTGCCACGAATTGTTACTCAGGCCTCCACGAATCAGGTATGCTATTTCCCCCCCTCAAAATCCTCTTCAATTGTTGTAATTTTGGGTCGAAAAAATTAGGGTTCTTCCCAAATTTGGGGATTTTGTAATTCGTTGTGTATTTGTGTTTTAGATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTATTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGCTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTGTTTAA

mRNA sequence

ATGTCGTATCACTGTGGAGAGAAAGCTGCTGGTGAGGAGGCGGCGGCGATGCGGTGGCGAGGCGCGCAAGGCGCTGGGCGATGCGATGCGAAGGTCCGGAAACAATGTGAAGTCACCCCGTCCAGGGAGCTGTATGTTAGAAATTGGGTTAAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCACTGTTACTTTGAAGAAATTAGAGATTCGTGAGAAAAGTATACTTACGTTACGTGTGTGGGAGCGACTTCAAGAAATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTATTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGCTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTGTTTAA

Coding sequence (CDS)

ATGTCGTATCACTGTGGAGAGAAAGCTGCTGGTGAGGAGGCGGCGGCGATGCGGTGGCGAGGCGCGCAAGGCGCTGGGCGATGCGATGCGAAGGTCCGGAAACAATGTGAAGTCACCCCGTCCAGGGAGCTGTATGTTAGAAATTGGGTTAAAAAGCTCGTAGTTGGACCTTGGGGTGGTACGACCGGTCCGCCTTTTGGTGTGCACCGGCCGTCTCGCCTCTTTCGCCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCACTGTTACTTTGAAGAAATTAGAGATTCGTGAGAAAAGTATACTTACGTTACGTGTGTGGGAGCGACTTCAAGAAATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTATTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGCTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTGTTTAA

Protein sequence

MSYHCGEKAAGEEAAAMRWRGAQGAGRCDAKVRKQCEVTPSRELYVRNWVKKLVVGPWGGTTGPPFGVHRPSRLFRRRCAPGLNWPGRASGTVTLKKLEIREKSILTLRVWERLQEIDNVPSKSENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03618.1Spo03618.1mRNA


Homology
[Close]
BLAST of Spo03618.1 vs. NCBI nr
Match: gi|902240620|gb|KNA26028.1| (hypothetical protein SOVF_000970 [Spinacia oleracea])

HSP 1 Score: 321.2 bits (822), Expect = 1.800e-84
Identity = 155/164 (94.51%), Postives = 158/164 (96.34%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N  T SVLLSGWCRMKNLMEAG+IWNEMIDQGLNPDV+THNIMLDGLLKVNKKSDAIKLF
Sbjct: 414 NTKTYSVLLSGWCRMKNLMEAGKIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 473

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           EVMKVKGP PNVRTYTILIRDLCKHSKLNEAVAYFD MTSSGCNPDAAVYTCLIT FGNL
Sbjct: 474 EVMKVKGPAPNVRTYTILIRDLCKHSKLNEAVAYFDEMTSSGCNPDAAVYTCLITGFGNL 533

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMDMVFGLLKE+KEKGYPPDGQLYNALIKLMTNRRMPDDAVRV
Sbjct: 534 KKMDMVFGLLKEMKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 577
[Close]
BLAST of Spo03618.1 vs. NCBI nr
Match: gi|731336637|ref|XP_010679367.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 292.4 bits (747), Expect = 9.000e-76
Identity = 135/164 (82.32%), Postives = 152/164 (92.68%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD++THNIML+GLLKV K+SDAIKLF
Sbjct: 386 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 445

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           E+MK KGP PNVR+YTIL+RDLCKH+K+ EAVAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 446 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 505

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 506 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 549
[Close]
BLAST of Spo03618.1 vs. NCBI nr
Match: gi|731336635|ref|XP_010679366.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 292.4 bits (747), Expect = 9.000e-76
Identity = 135/164 (82.32%), Postives = 152/164 (92.68%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD++THNIML+GLLKV K+SDAIKLF
Sbjct: 429 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 488

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           E+MK KGP PNVR+YTIL+RDLCKH+K+ EAVAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 489 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 548

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 549 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 592
[Close]
BLAST of Spo03618.1 vs. NCBI nr
Match: gi|720008129|ref|XP_010258534.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 262.7 bits (670), Expect = 7.600e-67
Identity = 121/164 (73.78%), Postives = 141/164 (85.98%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           NL T SVLL+GWC++KNLMEAG++WNEMID+GL PD++ HNIML+GLL+  K+S+AIKLF
Sbjct: 415 NLQTYSVLLAGWCKVKNLMEAGKVWNEMIDKGLKPDIVAHNIMLEGLLRGKKRSEAIKLF 474

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           E+MK KGP PNVR+YTILIRDLCK SK+ +AV YFD M   GC PD AVYTCLI  FGN 
Sbjct: 475 EIMKAKGPSPNVRSYTILIRDLCKGSKMEQAVEYFDEMLDCGCQPDPAVYTCLIVGFGNQ 534

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMD V+GLLKE+KEKG PPDG+ YNALIKLMTNR+MPDDAVRV
Sbjct: 535 KKMDKVYGLLKEMKEKGCPPDGRTYNALIKLMTNRQMPDDAVRV 578
[Close]
BLAST of Spo03618.1 vs. NCBI nr
Match: gi|296081511|emb|CBI20034.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 261.2 bits (666), Expect = 2.200e-66
Identity = 123/164 (75.00%), Postives = 137/164 (83.54%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD+I H+ ML+GLLK  KKSDAIKLF
Sbjct: 326 NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 385

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           EVMK KGP PNVRTYTILIRDLCK  K+ EAV YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 386 EVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 445

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 446 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 489
[Close]
BLAST of Spo03618.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2T3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_000970 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.300e-84
Identity = 155/164 (94.51%), Postives = 158/164 (96.34%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N  T SVLLSGWCRMKNLMEAG+IWNEMIDQGLNPDV+THNIMLDGLLKVNKKSDAIKLF
Sbjct: 414 NTKTYSVLLSGWCRMKNLMEAGKIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 473

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           EVMKVKGP PNVRTYTILIRDLCKHSKLNEAVAYFD MTSSGCNPDAAVYTCLIT FGNL
Sbjct: 474 EVMKVKGPAPNVRTYTILIRDLCKHSKLNEAVAYFDEMTSSGCNPDAAVYTCLITGFGNL 533

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMDMVFGLLKE+KEKGYPPDGQLYNALIKLMTNRRMPDDAVRV
Sbjct: 534 KKMDMVFGLLKEMKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 577
[Close]
BLAST of Spo03618.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCN2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g121700 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.200e-76
Identity = 135/164 (82.32%), Postives = 152/164 (92.68%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD++THNIML+GLLKV K+SDAIKLF
Sbjct: 429 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 488

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           E+MK KGP PNVR+YTIL+RDLCKH+K+ EAVAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 489 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 548

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 549 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 592
[Close]
BLAST of Spo03618.1 vs. UniProtKB/TrEMBL
Match: A5AVH1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028672 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.500e-66
Identity = 123/164 (75.00%), Postives = 137/164 (83.54%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD+I H+ ML+GLLK  KKSDAIKLF
Sbjct: 371 NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 430

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           EVMK KGP PNVRTYTILIRDLCK  K+ EAV YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 431 EVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 490

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 491 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 534
[Close]
BLAST of Spo03618.1 vs. UniProtKB/TrEMBL
Match: F6H1T3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00750 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.500e-66
Identity = 123/164 (75.00%), Postives = 137/164 (83.54%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD+I H+ ML+GLLK  KKSDAIKLF
Sbjct: 77  NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 136

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           EVMK KGP PNVRTYTILIRDLCK  K+ EAV YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 137 EVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 196

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 197 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 240
[Close]
BLAST of Spo03618.1 vs. UniProtKB/TrEMBL
Match: B9I9J7_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s11650g PE=4 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 7.600e-66
Identity = 118/164 (71.95%), Postives = 142/164 (86.59%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           NL T +VLL+GWCR+KNLMEAG IWNEM+D+G  PD++THNIML+GLL+  K+SDAIK F
Sbjct: 314 NLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFF 373

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
           EVMK KGP P+VR+YTILIRDLCK +K+ EAV YF  M  SGC+PDAAVYTCL+T +GN 
Sbjct: 374 EVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNH 433

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           K+MDMV+ LLKE+KEKG PPDG+ YNALIKLMT++RMPDDAVR+
Sbjct: 434 KRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRI 477
[Close]
BLAST of Spo03618.1 vs. ExPASy Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.600e-62
Identity = 107/164 (65.24%), Postives = 133/164 (81.10%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T +VLL+GWCR++NL+EA  IWN+MIDQGL PD++ HN+ML+GLL+  KKSDAIKLF
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
            VMK KGP PNVR+YTI+IRD CK S +  A+ YFD M  SG  PDAAVYTCLIT FG  
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+ A R+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
[Close]
BLAST of Spo03618.1 vs. ExPASy Swiss-Prot
Match: PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.800e-60
Identity = 105/164 (64.02%), Postives = 131/164 (79.88%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD++ HN+ML+GLL+  KKSDAIKLF
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
            VMK KGP PNVR+YTI+IRD CK S +  A+ YFD M  SG  PDAAVYTCLIT FG  
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
[Close]
BLAST of Spo03618.1 vs. ExPASy Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.800e-60
Identity = 105/164 (64.02%), Postives = 131/164 (79.88%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD++ HN+ML+GLL+  KKSDAIKLF
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
            VMK KGP PNVR+YTI+IRD CK S +  A+ YFD M  SG  PDAAVYTCLIT FG  
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
[Close]
BLAST of Spo03618.1 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.300e-21
Identity = 56/161 (34.78%), Postives = 88/161 (54.66%), Query Frame = 1 

		  

Query: 129 TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLFEVM 188
           T S+LL GW +  NL +A E++ EMID G +PD++T++IM+D L K  +  +A+ +   M
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298

Query: 189 KVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKM 248
                 P    Y++L+      ++L EAV  F  M  SG   D AV+  LI  F    +M
Sbjct: 299 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358

Query: 249 DMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
             V+ +LKE+K KG  P+ +  N +++ +  R   D+A  V
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
[Close]
BLAST of Spo03618.1 vs. ExPASy Swiss-Prot
Match: PPR27_ARATH (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.200e-21
Identity = 54/151 (35.76%), Postives = 85/151 (56.29%), Query Frame = 1 

		  

Query: 124 SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIK 183
           S NL T ++L+ G+ +  NL  + +++ EM+DQ + P+VI++N +++GL    K S+AI 
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352

Query: 184 LFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFG 243
           + + M   G  PN+ TY  LI   CK+  L EA+  F  +   G  P   +Y  LI  + 
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412

Query: 244 NLKKMDMVFGLLKELKEKGYPPDGQLYNALI 275
            L K+D  F L +E++ +G  PD   YN LI
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
[Close]
BLAST of Spo03618.1 vs. TAIR (Arabidopsis)
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 238.4 bits (607), Expect = 5.400e-63
Identity = 107/164 (65.24%), Postives = 133/164 (81.10%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T +VLL+GWCR++NL+EA  IWN+MIDQGL PD++ HN+ML+GLL+  KKSDAIKLF
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
            VMK KGP PNVR+YTI+IRD CK S +  A+ YFD M  SG  PDAAVYTCLIT FG  
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+ A R+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
[Close]
BLAST of Spo03618.1 vs. TAIR (Arabidopsis)
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 234.2 bits (596), Expect = 1.000e-61
Identity = 105/164 (64.02%), Postives = 131/164 (79.88%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD++ HN+ML+GLL+  KKSDAIKLF
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
            VMK KGP PNVR+YTI+IRD CK S +  A+ YFD M  SG  PDAAVYTCLIT FG  
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
[Close]
BLAST of Spo03618.1 vs. TAIR (Arabidopsis)
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 234.2 bits (596), Expect = 1.000e-61
Identity = 105/164 (64.02%), Postives = 131/164 (79.88%), Query Frame = 1 

		  

Query: 126 NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLF 185
           N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD++ HN+ML+GLL+  KKSDAIKLF
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356

Query: 186 EVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNL 245
            VMK KGP PNVR+YTI+IRD CK S +  A+ YFD M  SG  PDAAVYTCLIT FG  
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416

Query: 246 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
           KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
[Close]
BLAST of Spo03618.1 vs. TAIR (Arabidopsis)
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 7.200e-23
Identity = 56/161 (34.78%), Postives = 88/161 (54.66%), Query Frame = 1 

		  

Query: 129 TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIKLFEVM 188
           T S+LL GW +  NL +A E++ EMID G +PD++T++IM+D L K  +  +A+ +   M
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298

Query: 189 KVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKM 248
                 P    Y++L+      ++L EAV  F  M  SG   D AV+  LI  F    +M
Sbjct: 299 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358

Query: 249 DMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 290
             V+ +LKE+K KG  P+ +  N +++ +  R   D+A  V
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
[Close]
BLAST of Spo03618.1 vs. TAIR (Arabidopsis)
Match: AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 4.600e-22
Identity = 54/151 (35.76%), Postives = 85/151 (56.29%), Query Frame = 1 

		  

Query: 124 SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVITHNIMLDGLLKVNKKSDAIK 183
           S NL T ++L+ G+ +  NL  + +++ EM+DQ + P+VI++N +++GL    K S+AI 
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352

Query: 184 LFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEAVAYFDGMTSSGCNPDAAVYTCLITRFG 243
           + + M   G  PN+ TY  LI   CK+  L EA+  F  +   G  P   +Y  LI  + 
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412

Query: 244 NLKKMDMVFGLLKELKEKGYPPDGQLYNALI 275
            L K+D  F L +E++ +G  PD   YN LI
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
The following BLAST results are available for this feature:
BLAST of Spo03618.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902240620|gb|KNA26028.1|1.8e-8494.5hypothetical protein SOVF_0009... [more]
gi|731336637|ref|XP_010679367.1|9.0e-7682.3PREDICTED: pentatricopeptide r... [more]
gi|731336635|ref|XP_010679366.1|9.0e-7682.3PREDICTED: pentatricopeptide r... [more]
gi|720008129|ref|XP_010258534.1|7.6e-6773.7PREDICTED: pentatricopeptide r... [more]
gi|296081511|emb|CBI20034.3|2.2e-6675.0unnamed protein product [Vitis... [more]
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BLAST of Spo03618.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2T3_SPIOL1.3e-8494.5Uncharacterized protein OS=Spi... [more]
A0A0J8CCN2_BETVU6.2e-7682.3Uncharacterized protein OS=Bet... [more]
A5AVH1_VITVI1.5e-6675.0Putative uncharacterized prote... [more]
F6H1T3_VITVI1.5e-6675.0Putative uncharacterized prote... [more]
B9I9J7_POPTR7.6e-6671.9Uncharacterized protein (Fragm... [more]
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BLAST of Spo03618.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP293_ARATH9.6e-6265.2Pentatricopeptide repeat-conta... [more]
PP382_ARATH1.8e-6064.0Pentatricopeptide repeat-conta... [more]
PP294_ARATH1.8e-6064.0Pentatricopeptide repeat-conta... [more]
PP129_ARATH1.3e-2134.7Pentatricopeptide repeat-conta... [more]
PPR27_ARATH8.2e-2135.7Pentatricopeptide repeat-conta... [more]
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BLAST of Spo03618.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G62470.15.4e-6365.2Pentatricopeptide repeat (PPR)... [more]
AT5G14820.11.0e-6164.0Pentatricopeptide repeat (PPR)... [more]
AT3G62540.11.0e-6164.0Pentatricopeptide repeat (PPR)... [more]
AT1G77360.17.2e-2334.7Tetratricopeptide repeat (TPR)... [more]
AT1G09820.14.6e-2235.7Pentatricopeptide repeat (PPR-... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 132..158
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 160..209
score: 6.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 221..280
score: 7.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 199..232
score: 1.8E-7coord: 234..266
score: 2.3E-4coord: 131..162
score: 2.2E-5coord: 163..197
score: 6.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 196..230
score: 11.608coord: 231..265
score: 9.821coord: 161..195
score: 10.753coord: 266..289
score: 6.708coord: 126..160
score: 10
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 109..289
score: 8.1
NoneNo IPR availablePANTHERPTHR24015:SF429SUBFAMILY NOT NAMEDcoord: 109..289
score: 8.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008152 metabolic process
biological_process GO:0006810 transport
biological_process GO:0001510 RNA methylation
biological_process GO:0006412 translation
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0007030 Golgi organization
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0007033 vacuole organization
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006465 signal peptide processing
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009651 response to salt stress
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006506 GPI anchor biosynthetic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006909 phagocytosis
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006897 endocytosis
biological_process GO:0009790 embryo development
biological_process GO:0042545 cell wall modification
biological_process GO:0051301 cell division
biological_process GO:0008643 carbohydrate transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0080167 response to karrikin
biological_process GO:0006508 proteolysis
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009524 phragmoplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0055029 nuclear DNA-directed RNA polymerase complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0009506 plasmodesma
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0004683 calmodulin-dependent protein kinase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005515 protein binding
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo146870.97Barchart | Table
Spo122530.97Barchart | Table
Spo246250.97Barchart | Table
Spo008980.97Barchart | Table
Spo050290.97Barchart | Table
Spo009360.97Barchart | Table
Spo141940.94Barchart | Table
Spo192060.93Barchart | Table
Spo134590.81Barchart | Table
Spo144410.80Barchart | Table
Spo122020.79Barchart | Table
Spo121760.76Barchart | Table
Spo019290.75Barchart | Table
Spo049230.75Barchart | Table
Spo036080.74Barchart | Table
Spo019140.74Barchart | Table
Spo271020.74Barchart | Table
Spo129420.74Barchart | Table
Spo148490.73Barchart | Table
Spo069620.73Barchart | Table
Spo121280.73Barchart | Table
Spo027310.72Barchart | Table
Spo154200.72Barchart | Table
Spo001750.72Barchart | Table
Spo140080.72Barchart | Table
Spo117330.72Barchart | Table
Spo085400.71Barchart | Table
Spo216910.71Barchart | Table
Spo206770.71Barchart | Table
Spo172680.71Barchart | Table
Spo130310.71Barchart | Table
Spo057310.71Barchart | Table
Spo060300.71Barchart | Table
Spo096740.71Barchart | Table
Spo068050.71Barchart | Table
Spo021070.70Barchart | Table
Spo062940.70Barchart | Table
Spo126630.70Barchart | Table
Spo144380.70Barchart | Table
Spo177240.70Barchart | Table
Spo184510.70Barchart | Table
Spo185750.70Barchart | Table
Spo239080.70Barchart | Table
Spo156030.69Barchart | Table
Spo020850.69Barchart | Table
Spo262660.69Barchart | Table
Spo066810.69Barchart | Table
Spo059900.69Barchart | Table
Spo237170.69Barchart | Table
Spo236640.69Barchart | Table
Spo248570.69Barchart | Table
Spo169450.69Barchart | Table
Spo052280.69Barchart | Table
Spo168210.69Barchart | Table
Spo135790.69Barchart | Table
Spo012310.68Barchart | Table
Spo061990.68Barchart | Table
Spo122010.68Barchart | Table
Spo148560.68Barchart | Table
Spo167860.68Barchart | Table
Spo019980.68Barchart | Table
Spo173720.68Barchart | Table
Spo195580.68Barchart | Table
Spo200710.68Barchart | Table
Spo012040.68Barchart | Table
Spo227600.68Barchart | Table
Spo231480.68Barchart | Table
Spo236100.68Barchart | Table
Spo247120.68Barchart | Table
Spo243090.67Barchart | Table
Spo217840.67Barchart | Table
Spo089690.67Barchart | Table
Spo006150.67Barchart | Table
Spo273470.67Barchart | Table
Spo055140.67Barchart | Table
Spo233290.67Barchart | Table
Spo010480.67Barchart | Table
Spo033810.67Barchart | Table
Spo198740.67Barchart | Table
Spo055570.67Barchart | Table
Spo102220.67Barchart | Table
Spo209570.67Barchart | Table
Spo243230.66Barchart | Table
Spo173400.66Barchart | Table
Spo272260.66Barchart | Table
Spo012610.66Barchart | Table
Spo085720.66Barchart | Table
Spo229060.66Barchart | Table
Spo090150.66Barchart | Table
Spo055350.66Barchart | Table
Spo031770.66Barchart | Table
Spo021840.66Barchart | Table
Spo041460.66Barchart | Table
Spo052250.66Barchart | Table
Spo170210.66Barchart | Table
Spo231230.65Barchart | Table
Spo153620.65Barchart | Table
Spo063140.65Barchart | Table
Spo055310.65Barchart | Table
Spo098030.65Barchart | Table
Spo033060.65Barchart | Table
Spo173710.65Barchart | Table
Spo267450.65Barchart | Table