Spo13285 (gene)

Overview
NameSpo13285
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSAUR-like auxin-responsive family protein
Locationchr2 : 15121028 .. 15121483 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAAAGTAGGCAAACTTGGAAAATTACTCAAGAAAATGCAATCAATGGGAAGATCAACATCATTTAATAATAATCATCATAATGAGCATACAACTAGTCTAAGCAGAAGAAGCTCAACATCCTCATCAACCATTGTTGCTTCAAAGTACAACAACAACAACAACAACAACTCCTACGACGATGACTCCTCACCGGAACCCTTCTCCGCCACCAATCTTTGCCCGGTTTACGTCGGAAAGTCTCGCCGGAGATACTTGGTTAGCTCGGAAGTCCTTGACCACCCGCTTTTTCGAGAACTCATAGAGCGGTCGTCCTCCGCCGGCGGTGGCGGCGGCGAGGAGGTTTCTGTTGGGTGTGAGGTGGTGTTGTTTGAGCATATGCTTTGGATGCTTGAAAATGCTGACCCTCAACCTGAGTCCTTGGATGAGCTTGTTGACTTCTATGCTTGCTAA

mRNA sequence

ATGACAAAAGTAGGCAAACTTGGAAAATTACTCAAGAAAATGCAATCAATGGGAAGATCAACATCATTTAATAATAATCATCATAATGAGCATACAACTAGTCTAAGCAGAAGAAGCTCAACATCCTCATCAACCATTGTTGCTTCAAAGTACAACAACAACAACAACAACAACTCCTACGACGATGACTCCTCACCGGAACCCTTCTCCGCCACCAATCTTTGCCCGGTTTACGTCGGAAAGTCTCGCCGGAGATACTTGGTTAGCTCGGAAGTCCTTGACCACCCGCTTTTTCGAGAACTCATAGAGCGGTCGTCCTCCGCCGGCGGTGGCGGCGGCGAGGAGGTTTCTGTTGGGTGTGAGGTGGTGTTGTTTGAGCATATGCTTTGGATGCTTGAAAATGCTGACCCTCAACCTGAGTCCTTGGATGAGCTTGTTGACTTCTATGCTTGCTAA

Coding sequence (CDS)

ATGACAAAAGTAGGCAAACTTGGAAAATTACTCAAGAAAATGCAATCAATGGGAAGATCAACATCATTTAATAATAATCATCATAATGAGCATACAACTAGTCTAAGCAGAAGAAGCTCAACATCCTCATCAACCATTGTTGCTTCAAAGTACAACAACAACAACAACAACAACTCCTACGACGATGACTCCTCACCGGAACCCTTCTCCGCCACCAATCTTTGCCCGGTTTACGTCGGAAAGTCTCGCCGGAGATACTTGGTTAGCTCGGAAGTCCTTGACCACCCGCTTTTTCGAGAACTCATAGAGCGGTCGTCCTCCGCCGGCGGTGGCGGCGGCGAGGAGGTTTCTGTTGGGTGTGAGGTGGTGTTGTTTGAGCATATGCTTTGGATGCTTGAAAATGCTGACCCTCAACCTGAGTCCTTGGATGAGCTTGTTGACTTCTATGCTTGCTAA

Protein sequence

MTKVGKLGKLLKKMQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNNNSYDDDSSPEPFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWMLENADPQPESLDELVDFYAC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13285.1Spo13285.1mRNA


Homology
[Close]
BLAST of Spo13285.1 vs. NCBI nr
Match: gi|902172434|gb|KNA08124.1| (hypothetical protein SOVF_165510 [Spinacia oleracea])

HSP 1 Score: 262.7 bits (670), Expect = 4.000e-67
Identity = 134/138 (97.10%), Postives = 134/138 (97.10%), Query Frame = 1 

		  

Query: 14  MQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNNNSYDDDSSPEPFSATN 73
           MQSMGRSTSFNNNHH EHTTSLSRRSSTSSSTIVASKY   NNNNSYDDDSSPEPFSATN
Sbjct: 1   MQSMGRSTSFNNNHHYEHTTSLSRRSSTSSSTIVASKY---NNNNSYDDDSSPEPFSATN 60

Query: 74  LCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWMLE 133
           LCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWMLE
Sbjct: 61  LCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWMLE 120

Query: 134 NADPQPESLDELVDFYAC 152
           NADPQPESLDELVDFYAC
Sbjct: 121 NADPQPESLDELVDFYAC 135
[Close]
BLAST of Spo13285.1 vs. NCBI nr
Match: gi|731352477|ref|XP_010687570.1| (PREDICTED: uncharacterized protein LOC104901673 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 198.0 bits (502), Expect = 1.200e-47
Identity = 110/152 (72.37%), Postives = 121/152 (79.61%), Query Frame = 1 

		  

Query: 1   MTKVGKLGKLLKKMQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNNNSY 60
           MTK GKLGKLLKKMQS+GR TSFN  +++ H +SLSRRSS+SSS          N+ NS 
Sbjct: 1   MTKAGKLGKLLKKMQSIGR-TSFNRENNDHHHSSLSRRSSSSSS----------NDQNSL 60

Query: 61  DDDSSPEPFSA-TNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVG 120
              SSPE FS  TNLCPVYVGKSRRRY+VSSEVLDHPLFREL+ERS   G GG EE+ VG
Sbjct: 61  ---SSPESFSTNTNLCPVYVGKSRRRYMVSSEVLDHPLFRELVERSCGGGYGGVEEICVG 120

Query: 121 CEVVLFEHMLWMLENADPQPESLDELVDFYAC 152
           CEVVLFEH+LWML NADPQPESLDELVDFYAC
Sbjct: 121 CEVVLFEHLLWMLNNADPQPESLDELVDFYAC 138
[Close]
BLAST of Spo13285.1 vs. NCBI nr
Match: gi|870851359|gb|KMT03406.1| (hypothetical protein BVRB_8g190940 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 176.4 bits (446), Expect = 3.700e-41
Identity = 98/139 (70.50%), Postives = 109/139 (78.42%), Query Frame = 1 

		  

Query: 14  MQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNNNSYDDDSSPEPFSA-T 73
           MQS+GR TSFN  +++ H +SLSRRSS+SSS          N+ NS    SSPE FS  T
Sbjct: 1   MQSIGR-TSFNRENNDHHHSSLSRRSSSSSS----------NDQNSL---SSPESFSTNT 60

Query: 74  NLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWML 133
           NLCPVYVGKSRRRY+VSSEVLDHPLFREL+ERS   G GG EE+ VGCEVVLFEH+LWML
Sbjct: 61  NLCPVYVGKSRRRYMVSSEVLDHPLFRELVERSCGGGYGGVEEICVGCEVVLFEHLLWML 120

Query: 134 ENADPQPESLDELVDFYAC 152
            NADPQPESLDELVDFYAC
Sbjct: 121 NNADPQPESLDELVDFYAC 125
[Close]
BLAST of Spo13285.1 vs. NCBI nr
Match: gi|698535089|ref|XP_009764073.1| (PREDICTED: uncharacterized protein LOC104215847 [Nicotiana sylvestris])

HSP 1 Score: 137.5 bits (345), Expect = 1.900e-29
Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 1 

		  

Query: 1   MTKVGKLGKL---LKKMQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNN 60
           M K GKL KL   LKKMQS                    +    + S +VA+ ++++++N
Sbjct: 1   MAKGGKLTKLKSVLKKMQSF-------------------KLGRVNGSAVVATHHSSSSDN 60

Query: 61  NSYDDDSSPEPFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVS 120
           +S+ DD+     S  N+ PVYVGKSRRRYL++S+V+DHPLFREL+E+S    G   E ++
Sbjct: 61  DSFSDDNH---CSNKNVYPVYVGKSRRRYLLNSDVVDHPLFRELVEKS----GDSEEYIT 120

Query: 121 VGCEVVLFEHMLWMLENADPQPESLDELVDFYAC 152
           VGCEVVLFEH+LWMLENADPQPESLDELV+FY+C
Sbjct: 121 VGCEVVLFEHLLWMLENADPQPESLDELVEFYSC 128
[Close]
BLAST of Spo13285.1 vs. NCBI nr
Match: gi|698475274|ref|XP_009785029.1| (PREDICTED: uncharacterized protein LOC104233335 [Nicotiana sylvestris])

HSP 1 Score: 136.3 bits (342), Expect = 4.300e-29
Identity = 81/154 (52.60%), Postives = 104/154 (67.53%), Query Frame = 1 

		  

Query: 1   MTKVGKLGKL---LKKMQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNN 60
           MTK GKL K+   LKKMQS                  LSR +S ++ ++V +      N+
Sbjct: 1   MTKGGKLTKIKSVLKKMQSF----------------KLSRVNSNNTISMVTT------NH 60

Query: 61  NSYDDDSSPEPFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVS 120
           +SYD+DS    +   NL PVYVGKSRR YLVSS+V+DHPLFREL+ER+    G   + ++
Sbjct: 61  SSYDNDSY-NSYENKNLHPVYVGKSRREYLVSSDVVDHPLFRELVERT----GDSDDYIT 120

Query: 121 VGCEVVLFEHMLWMLENADPQPESLDELVDFYAC 152
           VGCEVVLFEH+LWML+NADPQPESL+ELV+FY+C
Sbjct: 121 VGCEVVLFEHLLWMLQNADPQPESLNELVEFYSC 127
[Close]
BLAST of Spo13285.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLL0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165510 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.800e-67
Identity = 134/138 (97.10%), Postives = 134/138 (97.10%), Query Frame = 1 

		  

Query: 14  MQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNNNSYDDDSSPEPFSATN 73
           MQSMGRSTSFNNNHH EHTTSLSRRSSTSSSTIVASKY   NNNNSYDDDSSPEPFSATN
Sbjct: 1   MQSMGRSTSFNNNHHYEHTTSLSRRSSTSSSTIVASKY---NNNNSYDDDSSPEPFSATN 60

Query: 74  LCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWMLE 133
           LCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWMLE
Sbjct: 61  LCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWMLE 120

Query: 134 NADPQPESLDELVDFYAC 152
           NADPQPESLDELVDFYAC
Sbjct: 121 NADPQPESLDELVDFYAC 135
[Close]
BLAST of Spo13285.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EK99_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g190940 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.600e-41
Identity = 98/139 (70.50%), Postives = 109/139 (78.42%), Query Frame = 1 

		  

Query: 14  MQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNNNSYDDDSSPEPFSA-T 73
           MQS+GR TSFN  +++ H +SLSRRSS+SSS          N+ NS    SSPE FS  T
Sbjct: 1   MQSIGR-TSFNRENNDHHHSSLSRRSSSSSS----------NDQNSL---SSPESFSTNT 60

Query: 74  NLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVVLFEHMLWML 133
           NLCPVYVGKSRRRY+VSSEVLDHPLFREL+ERS   G GG EE+ VGCEVVLFEH+LWML
Sbjct: 61  NLCPVYVGKSRRRYMVSSEVLDHPLFRELVERSCGGGYGGVEEICVGCEVVLFEHLLWML 120

Query: 134 ENADPQPESLDELVDFYAC 152
            NADPQPESLDELVDFYAC
Sbjct: 121 NNADPQPESLDELVDFYAC 125
[Close]
BLAST of Spo13285.1 vs. UniProtKB/TrEMBL
Match: K4DC17_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.500e-31
Identity = 89/156 (57.05%), Postives = 103/156 (66.03%), Query Frame = 1 

		  

Query: 1   MTKVGKLGKL---LKKMQS--MGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNN 60
           MTK GKL K+   LKKMQS  +GR  S NN      T  L   +  S        Y ++N
Sbjct: 1   MTKGGKLTKIKSVLKKMQSFKLGRVNSINN------TIMLENNAYNS--------YEDDN 60

Query: 61  NNNSYDDDSSPEPFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEE 120
           NNN+ DD          NL PVYVGKSRRRYLV+S+V+DHPLFRELIER     G   E 
Sbjct: 61  NNNNNDD----------NLHPVYVGKSRRRYLVTSDVIDHPLFRELIERRR---GDSEEY 120

Query: 121 VSVGCEVVLFEHMLWMLENADPQPESLDELVDFYAC 152
           VSVGCEVVLFEH+LWML+NADPQPES+DELV+FY+C
Sbjct: 121 VSVGCEVVLFEHLLWMLQNADPQPESMDELVEFYSC 129
[Close]
BLAST of Spo13285.1 vs. UniProtKB/TrEMBL
Match: M0ZT41_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002896 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.100e-30
Identity = 88/156 (56.41%), Postives = 101/156 (64.74%), Query Frame = 1 

		  

Query: 1   MTKVGKLGKL---LKKMQS--MGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNN 60
           MTK GKL K+   LKKMQS  +GR  S NN +  E+    S               NNNN
Sbjct: 1   MTKGGKLTKIKSVLKKMQSFKIGRVNSINNTNMLENNAYNSFEDD-----------NNNN 60

Query: 61  NNNSYDDDSSPEPFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEE 120
           NNN              NL PVYVGKSRRRYLV+S+V+DHPLFRELIER +S      E 
Sbjct: 61  NNN--------------NLHPVYVGKSRRRYLVTSDVIDHPLFRELIERRTS---DSEEY 120

Query: 121 VSVGCEVVLFEHMLWMLENADPQPESLDELVDFYAC 152
           VSVGCEVVLFEH+LWML+NADPQPES+DELV+FY+C
Sbjct: 121 VSVGCEVVLFEHLLWMLQNADPQPESMDELVEFYSC 128
[Close]
BLAST of Spo13285.1 vs. UniProtKB/TrEMBL
Match: A0A166C1L4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011920 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.900e-28
Identity = 81/154 (52.60%), Postives = 101/154 (65.58%), Query Frame = 1 

		  

Query: 1   MTKVGKLGKL---LKKMQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNN 60
           M K GKL K+   LKK QS G+               L R    S+S+I A+  + ++ +
Sbjct: 1   MAKTGKLTKIKSVLKKWQSFGK---------------LGR----SNSSIAAANTSFSDED 60

Query: 61  NSYDDDSSPEPFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVS 120
           +S+D  SS + F      PVYVGKSRRRYLV+SE+LDHP+FREL+ERS    G   + + 
Sbjct: 61  SSFDQISSRDNF------PVYVGKSRRRYLVNSEILDHPVFRELVERS----GDEDDNIV 120

Query: 121 VGCEVVLFEHMLWMLENADPQPESLDELVDFYAC 152
           V CEVVLFEH+LWMLENADPQPESLDELV+FYAC
Sbjct: 121 VSCEVVLFEHLLWMLENADPQPESLDELVEFYAC 125
[Close]
BLAST of Spo13285.1 vs. TAIR (Arabidopsis)
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 94.0 bits (232), Expect = 8.600e-20
Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = 1 

		  

Query: 49  SKYNNNNNNNSYDDDSSPEPFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSA 108
           +K N      ++   S+   F + +L  VYVG++RR Y VSS+V+ HPLF++L   ++  
Sbjct: 23  TKPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRRTYHVSSDVVSHPLFQQL---AAVD 82

Query: 109 GGGGGEE--VSVGCEVVLFEHMLWMLENAD---PQPESLDELVDFYAC 152
           GG G E+  +SV CEVVLFEH+LWMLENAD    +PES+ ELV+FYAC
Sbjct: 83  GGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESVYELVEFYAC 127
[Close]
BLAST of Spo13285.1 vs. TAIR (Arabidopsis)
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 89.7 bits (221), Expect = 1.600e-18
Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1 

		  

Query: 4   VGKLGKLLKKMQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNNNSYDDD 63
           + K+GKL K   +M +  SF  NHH+          STSS+ +                 
Sbjct: 1   MAKVGKLTKLKSAMKKWPSFAKNHHH----------STSSAAV----------------- 60

Query: 64  SSPEPFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEVSVGCEVV 123
            S E     NL  VYVG++RR Y++  +++ HPLF+EL++RSSS       E+ V CEVV
Sbjct: 61  -SDELSEDNNLHVVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSIEQDREIVVACEVV 117

Query: 124 LFEHMLWMLENADPQPESLDELVDFY 150
           LFEH+LWML++   +  S++EL +FY
Sbjct: 121 LFEHLLWMLKSGQ-EGGSVEELAEFY 117
[Close]
BLAST of Spo13285.1 vs. TAIR (Arabidopsis)
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 77.4 bits (189), Expect = 8.300e-15
Identity = 55/152 (36.18%), Postives = 75/152 (49.34%), Query Frame = 1 

		  

Query: 8   GKLLKKMQSMGRSTSFNNNHHNEHTTSLSRRSSTSSSTIVASKYNNNNNNNSYDDDSSPE 67
           GKL K   ++ +  S   NHH+   T+ +  S  S                         
Sbjct: 5   GKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSK------------------------ 64

Query: 68  PFSATNLCPVYVGKSRRRYLVSSEVLDHPLFRELIERSSS--AGGGGGEEVSVGCEVVLF 127
                +L  VYVGKSRR Y++SS V+ HPLF+EL++RSS         E V V CEVVLF
Sbjct: 65  ---CEDLHVVYVGKSRRPYMLSSHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLF 124

Query: 128 EHMLWMLENA--------DPQPESLDELVDFY 150
           EH+LWML+N+        D +  S++EL +FY
Sbjct: 125 EHLLWMLKNSSSDHGDEDDRERGSVEELAEFY 129
[Close]
BLAST of Spo13285.1 vs. TAIR (Arabidopsis)
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 58.9 bits (141), Expect = 3.100e-9
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 1 

		  

Query: 32  TTSLSRRSSTSSSTIVASKYNNNNNNNSYDDDSSPEPFSATNLCPVYVGKSRRRYLVSSE 91
           +T L R  S S +++ +     +  ++  D D SP P        V VG++++ YL+S +
Sbjct: 18  STQLGR--SYSYTSLRSKSARRDPQDHLQDVDQSPTPSMYQT---VLVGRTKKPYLISKK 77

Query: 92  VLDHPLFRELIERSSSAGGGGGEE----VSVGCEVVLFEHMLWMLENADPQP--ESLDEL 150
            L HPL   L+E+         E+    ++V CEVVLF+H+LWMLE  D     ESLD+ 
Sbjct: 78  HLKHPLLNALVEKQQRYEEDDNEDGSCIITVKCEVVLFDHLLWMLEYGDEVHILESLDDF 136
[Close]
BLAST of Spo13285.1 vs. TAIR (Arabidopsis)
Match: AT1G16510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 48.1 bits (113), Expect = 5.400e-6
Identity = 21/55 (38.18%), Postives = 37/55 (67.27%), Query Frame = 1 

		  

Query: 76  PVYVGKSRRRYLVSSEVLDHPLFRELIERSSSAGGGGGEEV-SVGCEVVLFEHML 130
           PVYVG+   R++VS+E+++HP+F  L+ RS+   G   + V  + C V++FE ++
Sbjct: 60  PVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVV 114
The following BLAST results are available for this feature:
BLAST of Spo13285.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902172434|gb|KNA08124.1|4.0e-6797.1hypothetical protein SOVF_1655... [more]
gi|731352477|ref|XP_010687570.1|1.2e-4772.3PREDICTED: uncharacterized pro... [more]
gi|870851359|gb|KMT03406.1|3.7e-4170.5hypothetical protein BVRB_8g19... [more]
gi|698535089|ref|XP_009764073.1|1.9e-2951.3PREDICTED: uncharacterized pro... [more]
gi|698475274|ref|XP_009785029.1|4.3e-2952.6PREDICTED: uncharacterized pro... [more]
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BLAST of Spo13285.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QLL0_SPIOL2.8e-6797.1Uncharacterized protein OS=Spi... [more]
A0A0J8EK99_BETVU2.6e-4170.5Uncharacterized protein OS=Bet... [more]
K4DC17_SOLLC5.5e-3157.0Uncharacterized protein OS=Sol... [more]
M0ZT41_SOLTU2.1e-3056.4Uncharacterized protein OS=Sol... [more]
A0A166C1L4_DAUCA1.9e-2852.6Uncharacterized protein OS=Dau... [more]
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BLAST of Spo13285.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13285.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G20820.18.6e-2049.0SAUR-like auxin-responsive pro... [more]
AT1G72430.11.6e-1837.6SAUR-like auxin-responsive pro... [more]
AT1G17345.18.3e-1536.1SAUR-like auxin-responsive pro... [more]
AT3G12955.13.1e-933.8SAUR-like auxin-responsive pro... [more]
AT1G16510.15.4e-638.1SAUR-like auxin-responsive pro... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 38..132
score: 1.1
NoneNo IPR availablePANTHERPTHR31374FAMILY NOT NAMEDcoord: 1..151
score: 2.9
NoneNo IPR availablePANTHERPTHR31374:SF5SUBFAMILY NOT NAMEDcoord: 1..151
score: 2.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006073 cellular glucan metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009733 response to auxin
biological_process GO:0006857 oligopeptide transport
biological_process GO:0016310 phosphorylation
biological_process GO:0009741 response to brassinosteroid
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005834 heterotrimeric G-protein complex
cellular_component GO:0048046 apoplast
cellular_component GO:0005618 cell wall
molecular_function GO:0016301 kinase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
RNA-Seq Expression