Spo17932 (gene)

Overview
NameSpo17932
Typegene
OrganismSpinacia oleracea (Spinach)
Description50S ribosomal protein L14, chloroplastic
Locationchr2 : 19143311 .. 19147631 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCAACCTCAGACCCATTTGAATGTAGGTGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGTATTATAAGATGATGAAGTACAATATTTGAATGAAATAGTAGATTGTGTATCACGTATATAGCTTTTATTTTTTATTTTTTATTAATTAATAATAATAATTTTTTATTCCTTTATCTGGAAATCAGAGGTCAAGGAGCCATTCCTTTGACTCGTACTGATGAGAATTTGACTCCACGAGAAATGGAACAAAAAGCGGCTGAATTGGCCTATTTCTTGCGTGTACCAATTGAAGTATTTTGAAAAATGGGCTGAAATTATGAATGCTTTCTTAACTTGGCGTAAGATAAAAAATCTAGAATATTTTTTTCTACGGCATACCTTAATCTCATCAGAACGCCCACTCGGGTCAAAACAGACGTATACAGAACAACCAAAAGGGAAAACTTTTTATGCCTACAAATAATAGGTCTTTAAATGGAAATCCATTCAATTCCGTAACAAAAAAAATAGTATTTTTTTTGTCCAGTAAGTATTTGTAATTGATATATAAAATACAAATACTTAATGTAAATTTTTTATGTTATCTCTTTTTCAGTAATACTTTCTTTTGTTCGCTTTAATGATCAAATAATTGGATTTATTATAATTTATAACGATAATTATCCAAACTCTTTTGTGTTTTGCCACCCATTTTTATCATCACATTCAGGCCTTCAATTCTTTTTTTGTGCTATGATTAACTTGTGCAATTTTTAAAAATATTTTCTATTTTGGTAGAAAGTGAGTTCTTTCATCTTGAAATCGAAATAATATCACTTAATTGAAAAATGAAGTGGTTCTGCCGCGTATTCATTAACAATTTATAGATGAAAAAAAAAATGGAAAAAAAGAAAGTATTTATTCCTTTTCTATATCTTATATCTATAGTATTTTTACCCTGGTGGATCTATCTATCATTTCAAAAAAGTCTGGAATCTTGGGTTACTACTTGGTGGAATACTAAGCAATCTGAAACTTTTTTGAATGATATTCAAGAAAAAAAGCTTCTCGAAAAATTCATCGAATTAGAGGAGCTCCGCTTGTTGGACGAAATGATAAAGGAATATCCAGAAACACAGTTACAAAAACTCGGTATAGGAATCCACAATGAAACGATTCAATTGATCAAGATGCACAATGAGGATTGTATCCATATGATTTTGCACTTCTCGACAAATTTAATCTGTTTCCTTATTCTAGGCGGTTATTCCATTCTGGGAAATAAAGAACTTATTCTTCTTAATTCTTGGGTTCAGGAATTCCTATATAACTTAAGCGACACAATAAAAGCTTTTTCTATTCTTTTAGTAACCGATTTATGTATCGGATTTCATTCACCCTAGGGTTGGGAACTACTAATTGAATCTATCTACAAAGATTTTGGATTTGCCGATAACGATCAAATTATATCGAGTCTTGTTTCCACTTTTCCATTCATTCTAGATACAATTTTGAAATATTGGATATTCCGTTCTTTAAATCGTGTATCCCCATCGCTTGTAGTGATTTATCATTCAATGAATGACTGAAAAGAAGAAAAAGGGTATACGGATATAAATCCAATTCAAATTTCTAATTCGAATGTTTGTTGCTTTGTACATAAAAATAATCAAAACATTACAAATTGCACCCCCTCTTTACTATTTCTACCCGTCTCAGGCGGGGAGTTCCTCCGATATTCCAGTAATATTTTTTTATTAAATTCAGTTTTCAGTTAAAGTAAATAGCAGAATCGTGGATAGGGGACTTTACTAGCAACCTACCCAATTTATTGTATAAATTTTCGGAATCAATGGTTGGACTATGCAAACTATAAATACCTTTTCTTGGATAAAAGAACAGATTACTCGATCCATTTCCATATCACTTATATTATATATAATAACTCGGTCATCCATTGCGAATGCCTATCCCATTTTCGCACAGCAAGGTTATGAAAATCCATGAGAGGCGACGGGACGTATTGTATGTGCCAATTGCCATTTAGCTAATAAGCCCGTGGATATTGAGGTTCCACAAGCGGTCCTTCCAGATACTGTATTTGAAGCAGTTGTTCGAATTCCTTATGATATGCAATTAAAACAAGTTTTAGCTAACGGTAAAAAGGGTGGCTTGAATGTGGGGGCTGTTCTTATTTTACCTGAGGGATTTGAATTAGCCCCACCCGATCGTATTTCTCCAGAGATGAAAGAAAAAATAGGGAATCTTTCTTTTCAGAGCTATCGCCCAATAAACAAAATATTCTTGTGATAGGTCCTGTTCCTGGGCAAAAATATAGTGAAATTACCTTTCCTATTCTTGCCCCGGACCCTGCCACTAAAAAAGACGTTCACTTCTTAAAATATCCGATATATGTAGGTGGTAACAGGGGAAGGGGTCAAATTTATCCTGACGGAAGCAAGAGTAATAATACAGTTTATAATTCCACAGCAACAAGTATAGTAAAGAAAATTGTACGAAAAGAAAAGGGCGGATACGAAATAAACATAGCGGATGCCTCGGATGGACGTGAAGTGGTTGATATTATCCCTCGAGGACCAGAGCTTCTTGTTTCCGAGGGTGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGGTTTGGTCAGGGAGACGCAGAAGTAGTACTTCAAGACCCACTGCGCATACAAGGTCTTTTATTTTTCTTTGCGTCTGTTATTTTAGCACAAATCTTTTTGGTTCTTAAAAAGAAACAATTCGAGAAGGTTCAATTGTCCGAAATGAATTTCTAGATTCGTGTATTTATCAAGCTTGTAACAATAACAAAATTTTTGTTGACAATTATTTGACAATTTTGGATGATCAATAAATCAAAAAATTCTGAGAAGGTTTTTTTTGTTTGTTTATACTTTTCTTGTATATCTACGAGAAGGTTGGAATTACTTGTACGAGATTATTAGTTATAATATCTATTGGATTGCGAAGAAGACTATTTTCCTTTTTTCCAATCGAAATTCGACTAGATGCTAGACTAAAGGGGAAATGTAACGAAAAGAATAATGAGGGGACCAAATGATTCTAGGGGGAGTTCTTTTCCTTCCTGGTCTTCGACACACGACAAGGAATTTTACACATACTTGTCGTGTGTCGAAATTGTAATGAGTCTTGATTCTCCTCGTCAAAGACTTAGTCGGAATTTTTTCTTAGTATTACACGTATAAGGAGTGGACAAACTGAAAAAAAAGGAGAGAGGTAAATTTTATGGAACAAATGGAACTTCTTGCATTCTAGTTAATCTAGAAAAATAAAGCTTCTATTGTGTCATTCAGTAAATCAAGTGATTACCTCTTTTTTTAACTTAACAATTTAGGAAGGATCAACAAGTACTATCAAGGAANGGGATTTAATGTTAATTTAACTAACAAAGCGAAAAACATCCTAGATCTAGAACCCATACAAAAGTATAGATTAAACGAATACATACATTTGATGCGTGTACTCCCACTAGCCTTATGAACACGAACGAGAACTCCACTTGTAGTTCCTCTACAGTAGTCCATTAACACGTTCAGATCCTCCATGATTCTGGTAGCTTAGATCTTCCACAAGGTATTTGGCTTTTGGGAAAAATCAACTTTGGAGGCACTCAGAGAATTAGGTTCTTTGTGTCTCTAGGGTTAGATGTGTGTAGTATGGAAAACCAAGTGGAGTAGGTTAATCCTTAAGGTTATATCCCAAACTGGCCAAAGGCACAAGGCCCAGTGACCGTCCAACTTGCTCATAAGCCCACACGGGCACAGCTCACAGGCGTTGGGCCTTGGGTCACGTGCTATGCGATTGCTGCTATTGTTTCTTCGTGCGCGCCCAGCCGCAAGGCCATGGGGCTTCTGCTCGCGTATAGGAAGCGTTGTGCACCTGCGGGCCAAGCGCATATGCGCGATTGGCTCGTGGGCCTCAACGTTACTCATTCCTCCTCGTGTTTGTGTCTAATGCCTTACTGTCATTATTGA

mRNA sequence

ATGATTCAACCTCAGACCCATTTGAATGTAGGTGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGCACAAGGCCCAGTGACCGTCCAACTTGCTCATAAGCCCACACGGGCACAGCTCACAGGCGTTGGGCCTTGGGTCACGTGCTATGCGATTGCTGCTATTGTTTCTTCGTGCGCGCCCAGCCGCAAGGCCATGGGGCTTCTGCTCGCGTATAGGAAGCGTTGTGCACCTGCGGGCCAAGCGCATATGCGCGATTGGCTCGTGGGCCTCAACGTTACTCATTCCTCCTCGTGTTTGTGTCTAATGCCTTACTGTCATTATTGA

Coding sequence (CDS)

ATGATTCAACCTCAGACCCATTTGAATGTAGGTGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGCACAAGGCCCAGTGACCGTCCAACTTGCTCATAAGCCCACACGGGCACAGCTCACAGGCGTTGGGCCTTGGGTCACGTGCTATGCGATTGCTGCTATTGTTTCTTCGTGCGCGCCCAGCCGCAAGGCCATGGGGCTTCTGCTCGCGTATAGGAAGCGTTGTGCACCTGCGGGCCAAGCGCATATGCGCGATTGGCTCGTGGGCCTCAACGTTACTCATTCCTCCTCGTGTTTGTGTCTAATGCCTTACTGTCATTATTGA

Protein sequence

MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRAVVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEAQGPVTVQLAHKPTRAQLTGVGPWVTCYAIAAIVSSCAPSRKAMGLLLAYRKRCAPAGQAHMRDWLVGLNVTHSSSCLCLMPYCHY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17932.1Spo17932.1mRNA


Homology
[Close]
BLAST of Spo17932.1 vs. NCBI nr
Match: gi|11497563|ref|NP_054971.1| (ribosomal protein L14 [Spinacia oleracea])

HSP 1 Score: 231.5 bits (589), Expect = 1.300e-57
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. NCBI nr
Match: gi|902181471|gb|KNA09754.1| (hypothetical protein SOVF_150420, partial [Spinacia oleracea])

HSP 1 Score: 229.2 bits (583), Expect = 6.600e-57
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARE MCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARESMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. NCBI nr
Match: gi|910354353|ref|YP_009160839.1| (ribosomal protein L14 (chloroplast) [Haloxylon ammodendron])

HSP 1 Score: 228.0 bits (580), Expect = 1.500e-56
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. NCBI nr
Match: gi|982898198|ref|YP_009221844.1| (ribosomal protein L14 (chloroplast) [Mesembryanthemum crystallinum])

HSP 1 Score: 227.3 bits (578), Expect = 2.500e-56
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. NCBI nr
Match: gi|12312|emb|CAA31717.1| (ribosomal protein L14 [Spinacia oleracea])

HSP 1 Score: 226.9 bits (577), Expect = 3.300e-56
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAA-VIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAA VIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
[Close]
BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR25_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_150420 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.600e-57
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARE MCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARESMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K9G2_9CARY (50S ribosomal protein L14, chloroplastic OS=Haloxylon persicum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.000e-56
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K8A5_9CARY (50S ribosomal protein L14, chloroplastic OS=Haloxylon ammodendron GN=rpl14 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.000e-56
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: A0A0G2R7W9_MESCR (50S ribosomal protein L14, chloroplastic OS=Mesembryanthemum crystallinum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.700e-56
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Match: H2BC32_9CARY (50S ribosomal protein L14, chloroplastic (Fragment) OS=Didierea madagascariensis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.700e-56
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_SPIOL (50S ribosomal protein L14, chloroplastic OS=Spinacia oleracea GN=rpl14 PE=1 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 8.300e-60
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_PLAOC (50S ribosomal protein L14, chloroplastic OS=Platanus occidentalis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PN PLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLSFTKIVSLAPE 120
[Close]
BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_EUCGG (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl14 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQ+HLNV DNSGARELMCIRIIGASNRRYA IGD+IVAVIKEA+PNTPLERSEVIRA
Sbjct: 1   MIQPQSHLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKEALPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPE 120
[Close]
BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_COFAR (50S ribosomal protein L14, chloroplastic OS=Coffea arabica GN=rpl14 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PN PLERSEV+RA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVVRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTRIFGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPE 120
[Close]
BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Match: RK14_CITSI (50S ribosomal protein L14, chloroplastic OS=Citrus sinensis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.100e-55
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNV DNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKEL+RDNGMIIRYDDNAAV+ID EGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPE 120
[Close]
BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: ATCG00780.1 (ribosomal protein L14)

HSP 1 Score: 211.8 bits (538), Expect = 3.800e-55
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQT+LNV DNSGARELMCIRIIGASNRRYA IGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKR+NG IIRYDDNAAV+IDQEGNPKGTR+FGAI RELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPE 120
[Close]
BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.600e-19
Identity = 53/124 (42.74%), Postives = 79/124 (63.71%), Query Frame = 1 

		  

Query: 2   IQPQTHLNVGDNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRAV 61
           IQ  T L V DNSGA+++MCI+ +    ++ AR+GD IVA +KEA+PN  +++  V+  V
Sbjct: 48  IQMGTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGV 107

Query: 62  VVRTCKELKRDNGMIIRYDDNAAVIIDQ-------EGNPKGTRIFGAIARELR-QKFAKI 118
           VVR   +  R +G  +R+DDNA V++D        +  P GTR+FG +  ELR +K  KI
Sbjct: 108 VVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKI 167
[Close]
BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.300e-12
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1 

		  

Query: 8   LNVGDNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N  DN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLA 118
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136
[Close]
BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.300e-12
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1 

		  

Query: 8   LNVGDNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N  DN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLA 118
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136
[Close]
BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.300e-12
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1 

		  

Query: 8   LNVGDNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N  DN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLA 118
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136
The following BLAST results are available for this feature:
BLAST of Spo17932.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|11497563|ref|NP_054971.1|1.3e-5799.1ribosomal protein L14 [Spinaci... [more]
gi|902181471|gb|KNA09754.1|6.6e-5798.3hypothetical protein SOVF_1504... [more]
gi|910354353|ref|YP_009160839.1|1.5e-5696.6ribosomal protein L14 (chlorop... [more]
gi|982898198|ref|YP_009221844.1|2.5e-5695.8ribosomal protein L14 (chlorop... [more]
gi|12312|emb|CAA31717.1|3.3e-5698.3ribosomal protein L14 [Spinaci... [more]
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BLAST of Spo17932.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QR25_SPIOL4.6e-5798.3Uncharacterized protein (Fragm... [more]
A0A0K0K9G2_9CARY1.0e-5696.650S ribosomal protein L14, chl... [more]
A0A0K0K8A5_9CARY1.0e-5696.650S ribosomal protein L14, chl... [more]
A0A0G2R7W9_MESCR1.7e-5695.850S ribosomal protein L14, chl... [more]
H2BC32_9CARY1.7e-5695.850S ribosomal protein L14, chl... [more]
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BLAST of Spo17932.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RK14_SPIOL8.3e-6099.150S ribosomal protein L14, chl... [more]
RK14_PLAOC1.2e-5591.650S ribosomal protein L14, chl... [more]
RK14_EUCGG1.2e-5590.850S ribosomal protein L14, chl... [more]
RK14_COFAR1.2e-5591.650S ribosomal protein L14, chl... [more]
RK14_CITSI2.1e-5590.850S ribosomal protein L14, chl... [more]
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BLAST of Spo17932.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
ATCG00780.13.8e-5590.0ribosomal protein L14[more]
AT5G46160.12.6e-1942.7Ribosomal protein L14p/L23e fa... [more]
AT1G04480.15.3e-1234.2Ribosomal protein L14p/L23e fa... [more]
AT2G33370.15.3e-1234.2Ribosomal protein L14p/L23e fa... [more]
AT3G04400.15.3e-1234.2Ribosomal protein L14p/L23e fa... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PGENE3D2.40.150.20coord: 1..119
score: 4.3
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 1..121
score: 24
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 1..121
score: 3.0
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 1..119
score: 1.6
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 1..121
score: 1.4
IPR000218Ribosomal protein L14PunknownSSF50193Ribosomal protein L14coord: 1..119
score: 2.88
IPR005745Ribosomal protein L14P, bacterial-typeTIGRFAMsTIGR01067TIGR01067coord: 1..119
score: 8.3
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 60..86
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0009736 cytokinin-activated signaling pathway
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0010104 regulation of ethylene-activated signaling pathway
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006396 RNA processing
biological_process GO:0016567 protein ubiquitination
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0015979 photosynthesis
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0006412 translation
cellular_component GO:0000785 chromatin
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0005634 nucleus
cellular_component GO:0000786 nucleosome
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0009507 chloroplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0003682 chromatin binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0003712 transcription coregulator activity
RNA-Seq Expression