Spo20601 (gene) | SpinachBase

Overview


Name	Spo20601
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Genomic DNA, chrom
Location	chr2 : 44622150 .. 44625131 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCTTGTCTACTCTTTGTCTACTGTAACTCCCGTTCCCCGTTGTCATTTAAAATCTGAATTTCAGGCTAAACATCATATGCAAAATAATTCCTCTTTGCTTTGGCGCCCTGAGTCTGCATTTATTCAGTATAGATACGAAATTCCAAATGGTATTAGTACTAGTACTTGCTTTGGGAAGCCTTACAATTCCTTTAGTGCCGTCTTAGCAACAAAGGCCGTGAAAGCTGATAACGGTGAGGTATCATCATTAGATGAAGAGGAAACTACTATTGATTTGGATTGGGGTGATGAGGAAGATGAGGGATCTCCATGGGAAGGGGCCATTGTCTATAAACGAAATTCTTCAATCTCTCACATGGAATACTGCACTACTTTAGAAAGACTTGGTTTAGGCAAGACTTCATCGGAACTGTCAAGGTCTAGGGCGTCAGCCATGGGATTACGTGTGACTAAAGCTGTGAAGGATTATACAGATGGAACACCTGTACTTATCTCTGTTGATGTTACCAGAAAGAAGCATAAATTAAGACTTGATGGCATCATGAGAACAGTTCTCTCCCTTGCTTGCAACAGGTACTTGATTCATACTTCATCGTTTTGAATACATAACGTTGCATGTTGCATCTCGTACCTCAAATTTCTCCTGACTGCTGTTTCATGCTGTCAAAAATAAAAAGATGAAGCAATCAGGATAATTAAGAGGATAGGATGGTTGTGGCCTGTCAGCCTGTGTGTCTTAGAATCTTAGTGAGTGAAGCTTACAACATCCACTTGAACAGGAAGTTATTTAAAAGGCGTTATCATGTTGCATGCTTACAATCCATTTTCTTGGTAATCAAATCTTATTTCTCCATTGATTTTAAAGGTGCGGTGAACCAGCAGTTGAGAGTATATTCTCCAATTTCTCACTACTGTTAACTGAGGAACCCGTGGAGGAGCCAGACGTCATAAACATGGGATTTATGTTTGGTGAAGATAAATTGAAGAGTTCCACTGGAACTGTTAACGAGGAAGATGATGATGATGCATCGATTGATCTGGAGGACAGGCTTCATTTCCCCCCAGAGGAAAAAGAAATTGACATTTCCAAGCACATCCGAGACATGATACATCTAGAGATCACCATGAACGCAGTATGTGATCCCAAATGCAAAGGCATGTGTTTTAATTGTGGTACAAATTTGAATATTGGTATATGCAGTTGTAGCAAACAGGAGACAAATGATGTGGGTTATGGACCACTCGGTGAATTAAGAAAGCAGATGCAGCAAACATGATTATCTTATCAGCTATATATAGCTCTTGTATGAAGGAATGCGGTTAGTACTATGACTGCATTCTCTCTTTGTACACCTGAAAATCGGGGTTTGTCCCAAGAAATGAGGAAATAGTTTTGTTTGTGAATACATGCTTAGTTACGGCTGCAGTTAACAGGATTCTGTTTAATGATACATCATGTCAACCTCAGGAGCTCGATCTTTGCTGTTGGAATAATATCTGTTACTAATTTGAGTTTACAATGAAAATATTCGGGATCAAGCTGTGAAAAACAATGGTTACTCATATCCTATCCATTTTCTCTCAGTTTATTTGGACATTGCAGGAAGCAATGCTATAACAACAGCAGGTCAGCAGCTATACTTGAAGAAACTACAGTTAAAACCGGTGTGTACTCCCTTCCTCCCAAAATTATTGTGCGCTAGGTAGGGATCGAACCCATGACCTTCTGGTTAGAAACACAATCTATCCACCACTGAGCTACAGACACAATTGATGCCACTAGAGGTTACTTCTAAGTTATATTTCTATTTAAACTGTAATTCATGTCAAAAATAATTTACAAAGCAAACCGCCATCTGAGATAGCGGTTTCGTTTTAAAGCAAACCGCTATCTCACAAGAGGTTACTTCTAAGTTATATTTCGTTTTTGCTTTAAAATGAAACCGCTATCTCATATGGCGGTTCAATGCTGAACCGGAAAAAAAAAATTACTTCTCTTTCTCCCTTGCTTACGTGGACGGTATGGTGGAAAATAACTTAGAAAGTAACGTATTTAGGGAATTGGATCTTTATGCAATATTGAAGGAAATCGCTCATAAAATTATAGTCCTGTTTCTAATTTTGGCTTCTAAGGTCCTCACTTTCTCATGTACTATATTAATTAAAAAGTATTGAAAACCCCACCCATGTACTTTATTCCACTTTCCTATGTACTATATTCTCTTTCACATGTACTTTATTCCACTTTTTCATGTACTATAATCCATTTTCTTAAAATCCGTGTTTTTGGTCAAACAGGACTATAATTATGGGACGGAGGGAGTATGAGAAAGCTCTGTCAGCCGCGGAATCCATAAGACAGGCAAGGACGCGGCTCTGATGCAGCAGCCTCACCACATTGAGCTCCATTGGCAGCATCCGTCCGTCATTCCTGGTACTATTTACCATCAGAAACCACTAAATATATTTGCAGTGTTCTTATTATCTCGATACTTAGCCGGCTGATTTAGGCTAATCCTACGAATTCCATTATACTTGGTACAAGATACAGCCTACACGAAACACAATAAGCAATATCTAAGCAAATTTAACAATAAAAGTCATTTTGGATGAAATGTTGCAACCAAGTTATCTCTTGTGATGGAATAAATTGGGCAAATTCAATTACCTCCATTTCCATATTTACAGATTCGAAAGTCAGTTAGGGGGAAATTCTGATATCTGTCAGGCTTAATTGGGCGCTCACCAGAATATTATGCCAGGGTAAATCTTGCGACAGGTGACAGTCTACAAAGTGGAGCGATCACAAGTCCATCAAGCTCACTTGCATGCCAAATCAGTGCTAGAAAATGGAAAACGGAGCAAATTTTGTTTGCATCCTTTGGAGTCTTATTAGTTTTTCTATTCTTATTTCTTTTTTAATTTCGTTGTGTTCTTTAGTAGATTAATCCTATATTAAATAAAATATATACTTCCT

mRNA sequence

ATGTCCCTTGTCTACTCTTTGTCTACTGTAACTCCCGTTCCCCGTTGTCATTTAAAATCTGAATTTCAGGCTAAACATCATATGCAAAATAATTCCTCTTTGCTTTGGCGCCCTGAGTCTGCATTTATTCAGTATAGATACGAAATTCCAAATGGTATTAGTACTAGTACTTGCTTTGGGAAGCCTTACAATTCCTTTAGTGCCGTCTTAGCAACAAAGGCCGTGAAAGCTGATAACGGTGAGGTATCATCATTAGATGAAGAGGAAACTACTATTGATTTGGATTGGGGTGATGAGGAAGATGAGGGATCTCCATGGGAAGGGGCCATTGTCTATAAACGAAATTCTTCAATCTCTCACATGGAATACTGCACTACTTTAGAAAGACTTGGTTTAGGCAAGACTTCATCGGAACTGTCAAGGTCTAGGGCGTCAGCCATGGGATTACGTGTGACTAAAGCTGTGAAGGATTATACAGATGGAACACCTGTACTTATCTCTGTTGATGTTACCAGAAAGAAGCATAAATTAAGACTTGATGGCATCATGAGAACAGTTCTCTCCCTTGCTTGCAACAGGTGCGGTGAACCAGCAGTTGAGAGTATATTCTCCAATTTCTCACTACTGTTAACTGAGGAACCCGTGGAGGAGCCAGACGTCATAAACATGGGATTTATGTTTGGTGAAGATAAATTGAAGAGTTCCACTGGAACTGTTAACGAGGAAGATGATGATGATGCATCGATTGATCTGGAGGACAGGCTTCATTTCCCCCCAGAGGAAAAAGAAATTGACATTTCCAAGCACATCCGAGACATGATACATCTAGAGATCACCATGAACGCAGTATGTGATCCCAAATGCAAAGGCATGTGTTTTAATTGTGGTACAAATTTGAATATTGGTATATGCAGTTGTAGCAAACAGGAGACAAATGATGTGGGTTATGGACCACTCGGTGAATTAAGAAAGCAGATGCAGCAAACATGATTATCTTATCAGCTATATATAGCTCTTGTATGAAGGAATGCGGTTAGTACTATGACTGCATTCTCTCTTTGTACACCTGAAAATCGGGGTTTGTCCCAAGAAATGAGGAAATAGTTTTGTTTGTGAATACATGCTTAGTTACGGCTGCAGTTAACAGGATTCTGTTTAATGATACATCATGTCAACCTCAGGAGCTCGATCTTTGCTGTTGGAATAATATCTGTTACTAATTTGAGTTTACAATGAAAATATTCGGGATCAAGCTGTGAAAAACAATGGTTACTCATATCCTATCCATTTTCTCTCAGTTTATTTGGACATTGCAGGAAGCAATGCTATAACAACAGCAGGTCAGCAGCTATACTTGAAGAAACTACAGTTAAAACCGGACTATAATTATGGGACGGAGGGAGTATGAGAAAGCTCTGTCAGCCGCGGAATCCATAAGACAGGCAAGGACGCGGCTCTGATGCAGCAGCCTCACCACATTGAGCTCCATTGGCAGCATCCGTCCGTCATTCCTGATTCGAAAGTCAGTTAGGGGGAAATTCTGATATCTGTCAGGCTTAATTGGGCGCTCACCAGAATATTATGCCAGGGTAAATCTTGCGACAGGTGACAGTCTACAAAGTGGAGCGATCACAAGTCCATCAAGCTCACTTGCATGCCAAATCAGTGCTAGAAAATGGAAAACGGAGCAAATTTTGTTTGCATCCTTTGGAGTCTTATTAGTTTTTCTATTCTTATTTCTTTTTTAATTTCGTTGTGTTCTTTAGTAGATTAATCCTATATTAAATAAAATATATACTTCCT

Coding sequence (CDS)

ATGTCCCTTGTCTACTCTTTGTCTACTGTAACTCCCGTTCCCCGTTGTCATTTAAAATCTGAATTTCAGGCTAAACATCATATGCAAAATAATTCCTCTTTGCTTTGGCGCCCTGAGTCTGCATTTATTCAGTATAGATACGAAATTCCAAATGGTATTAGTACTAGTACTTGCTTTGGGAAGCCTTACAATTCCTTTAGTGCCGTCTTAGCAACAAAGGCCGTGAAAGCTGATAACGGTGAGGTATCATCATTAGATGAAGAGGAAACTACTATTGATTTGGATTGGGGTGATGAGGAAGATGAGGGATCTCCATGGGAAGGGGCCATTGTCTATAAACGAAATTCTTCAATCTCTCACATGGAATACTGCACTACTTTAGAAAGACTTGGTTTAGGCAAGACTTCATCGGAACTGTCAAGGTCTAGGGCGTCAGCCATGGGATTACGTGTGACTAAAGCTGTGAAGGATTATACAGATGGAACACCTGTACTTATCTCTGTTGATGTTACCAGAAAGAAGCATAAATTAAGACTTGATGGCATCATGAGAACAGTTCTCTCCCTTGCTTGCAACAGGTGCGGTGAACCAGCAGTTGAGAGTATATTCTCCAATTTCTCACTACTGTTAACTGAGGAACCCGTGGAGGAGCCAGACGTCATAAACATGGGATTTATGTTTGGTGAAGATAAATTGAAGAGTTCCACTGGAACTGTTAACGAGGAAGATGATGATGATGCATCGATTGATCTGGAGGACAGGCTTCATTTCCCCCCAGAGGAAAAAGAAATTGACATTTCCAAGCACATCCGAGACATGATACATCTAGAGATCACCATGAACGCAGTATGTGATCCCAAATGCAAAGGCATGTGTTTTAATTGTGGTACAAATTTGAATATTGGTATATGCAGTTGTAGCAAACAGGAGACAAATGATGTGGGTTATGGACCACTCGGTGAATTAAGAAAGCAGATGCAGCAAACATGA

Protein sequence

MSLVYSLSTVTPVPRCHLKSEFQAKHHMQNNSSLLWRPESAFIQYRYEIPNGISTSTCFGKPYNSFSAVLATKAVKADNGEVSSLDEEETTIDLDWGDEEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSRASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIFSNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKEIDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELRKQMQQT

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo20601.1	Spo20601.1	mRNA

Homology

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BLAST of Spo20601.1 vs. NCBI nr
Match: gi|902219058|gb|KNA18209.1| (hypothetical protein SOVF_072910 [Spinacia oleracea])

HSP 1 Score: 605.1 bits (1559), Expect = 7.100e-170
Identity = 301/302 (99.67%), Postives = 301/302 (99.67%), Query Frame = 1


		  
Query: 28  MQNNSSLLWRPESAFIQYRYEIPNGISTSTCFGKPYNSFSAVLATKAVKADNGEVSSLDE 87
           MQNNSSLLWRPESAFIQYRYEIPNGISTSTCFGKPYNSFSAVLATKAVKADNGEVSSL E
Sbjct: 1   MQNNSSLLWRPESAFIQYRYEIPNGISTSTCFGKPYNSFSAVLATKAVKADNGEVSSLYE 60

Query: 88  EETTIDLDWGDEEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSRASAM 147
           EETTIDLDWGDEEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSRASAM
Sbjct: 61  EETTIDLDWGDEEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSRASAM 120

Query: 148 GLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIFSNFS 207
           GLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIFSNFS
Sbjct: 121 GLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIFSNFS 180

Query: 208 LLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKEIDIS 267
           LLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKEIDIS
Sbjct: 181 LLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKEIDIS 240

Query: 268 KHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELRKQMQ 327
           KHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELRKQMQ
Sbjct: 241 KHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELRKQMQ 300

Query: 328 QT 330
           QT
Sbjct: 301 QT 302

[Close]

BLAST of Spo20601.1 vs. NCBI nr
Match: gi|731354704|ref|XP_010688741.1| (PREDICTED: uncharacterized protein LOC104902609 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 513.8 bits (1322), Expect = 2.200e-142
Identity = 255/329 (77.51%), Postives = 286/329 (86.93%), Query Frame = 1


		  
Query: 1   MSLVYSLSTVTPVPRCHLKSEFQAKHHMQNNSSLLWRPESAFIQYRYEIPNGISTSTCFG 60
           MSLVYSLS+V+P      KS  QAK  M NN + LWRPESA++Q R  +P GISTS C G
Sbjct: 1   MSLVYSLSSVSP------KSVVQAKPQMPNNPTFLWRPESAYLQCRCRMPAGISTSACLG 60

Query: 61  KPYNSFSAVLATKAVKADNGEVSSLDEEETTIDLDWGDEEDEGSPWEGAIVYKRNSSISH 120
           KPYN  +  LATKA+K D+GEV S +E+E TID DW DEEDEGSPWEGAIVY+RN SISH
Sbjct: 61  KPYNFSNVFLATKALKIDDGEVLSFEEDEDTIDFDWADEEDEGSPWEGAIVYRRNPSISH 120

Query: 121 MEYCTTLERLGLGKTSSELSRSRASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLD 180
           +EYCTTLERLGLGK SSELSRS+ASAMGLRVTKAVKD+T+GTPVLISVDVTRKKHKLRLD
Sbjct: 121 LEYCTTLERLGLGKISSELSRSKASAMGLRVTKAVKDFTNGTPVLISVDVTRKKHKLRLD 180

Query: 181 GIMRTVLSLACNRCGEPAVESIFSNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVN 240
           GI+RTV+SL+CNRCGEPAVES+FSNF+LLLTEEPVEEPDVINMG +FGEDKLKSS  T N
Sbjct: 181 GIIRTVISLSCNRCGEPAVESVFSNFTLLLTEEPVEEPDVINMGLVFGEDKLKSSARTAN 240

Query: 241 --EEDDDDASIDLEDRLHFPPEEKEIDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGTN 300
             EE+DDDASID+EDRLHFPPE KEIDISKH+RDM+HLEIT+NAVCD KCKG+C  CGTN
Sbjct: 241 EEEEEDDDASIDIEDRLHFPPEIKEIDISKHLRDMLHLEITINAVCDSKCKGLCLKCGTN 300

Query: 301 LNIGICSCSKQETNDVGYGPLGELRKQMQ 328
           LNIG+C+CSKQE  DVGYGPLG+LRKQMQ
Sbjct: 301 LNIGVCNCSKQEIKDVGYGPLGDLRKQMQ 323

[Close]

BLAST of Spo20601.1 vs. NCBI nr
Match: gi|641834009|gb|KDO53012.1| (hypothetical protein CISIN_1g021267mg [Citrus sinensis])

HSP 1 Score: 364.4 bits (934), Expect = 2.100e-97
Identity = 174/245 (71.02%), Postives = 209/245 (85.31%), Query Frame = 1


		  
Query: 88  EETTIDLDWGD----EEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSR 147
           E+ T   DW D    EED GSPWEGAI+YKRN SI+H+EYCTTLERLGLGK S+E+SRSR
Sbjct: 70  EDETESYDWEDQEDVEEDAGSPWEGAIIYKRNPSITHLEYCTTLERLGLGKLSTEVSRSR 129

Query: 148 ASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIF 207
           ASAMGLRVTKAVKDY +GTPV IS+DVT+KK KLRLDGI+RTVL+L CNRCGEPA +S+F
Sbjct: 130 ASAMGLRVTKAVKDYPNGTPVQISIDVTKKKQKLRLDGIIRTVLTLGCNRCGEPAAQSVF 189

Query: 208 SNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKE 267
           S+FS+LL+E+P+EEP++I++G MFGEDK KSSTG  +EE+DDDASID +DRL+FP EEKE
Sbjct: 190 SDFSVLLSEQPIEEPEIIHIGMMFGEDKSKSSTGNGSEEEDDDASIDWDDRLYFPLEEKE 249

Query: 268 IDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELR 327
           IDISK+IRDM+HLEIT+N +CDP CKG+C  CGTNLN   C+CSK+E     YGPLG LR
Sbjct: 250 IDISKNIRDMVHLEITINVICDPSCKGICLKCGTNLNTSTCNCSKEEVKGKTYGPLGNLR 309

Query: 328 KQMQQ 329
           KQM++
Sbjct: 310 KQMER 314

[Close]

BLAST of Spo20601.1 vs. NCBI nr
Match: gi|568862373|ref|XP_006484658.1| (PREDICTED: uncharacterized protein LOC102619910 isoform X2 [Citrus sinensis])

HSP 1 Score: 364.4 bits (934), Expect = 2.100e-97
Identity = 174/245 (71.02%), Postives = 209/245 (85.31%), Query Frame = 1


		  
Query: 88  EETTIDLDWGD----EEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSR 147
           E+ T   DW D    EED GSPWEGAI+YKRN SI+H+EYCTTLERLGLGK S+E+SRSR
Sbjct: 70  EDETESYDWEDQEDVEEDAGSPWEGAIIYKRNPSITHLEYCTTLERLGLGKLSTEVSRSR 129

Query: 148 ASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIF 207
           ASAMGLRVTKAVKDY +GTPV IS+DVT+KK KLRLDGI+RTVL+L CNRCGEPA +S+F
Sbjct: 130 ASAMGLRVTKAVKDYPNGTPVQISIDVTKKKQKLRLDGIIRTVLTLGCNRCGEPATQSVF 189

Query: 208 SNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKE 267
           S+FS+LL+E+P+EEP++I++G MFGEDK KSSTG  +EE+DDDASID +DRL+FP EEKE
Sbjct: 190 SDFSVLLSEQPIEEPEIIDIGMMFGEDKSKSSTGNGSEEEDDDASIDWDDRLYFPLEEKE 249

Query: 268 IDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELR 327
           IDISK+IRDM+HLEIT+N +CDP CKG+C  CGTNLN   C+CSK+E     YGPLG LR
Sbjct: 250 IDISKNIRDMVHLEITINVICDPSCKGICLKCGTNLNTSTCNCSKEEVKGKTYGPLGNLR 309

Query: 328 KQMQQ 329
           KQM++
Sbjct: 310 KQMER 314

[Close]

BLAST of Spo20601.1 vs. NCBI nr
Match: gi|568862371|ref|XP_006484657.1| (PREDICTED: uncharacterized protein LOC102619910 isoform X1 [Citrus sinensis])

HSP 1 Score: 364.4 bits (934), Expect = 2.100e-97
Identity = 174/245 (71.02%), Postives = 209/245 (85.31%), Query Frame = 1


		  
Query: 88  EETTIDLDWGD----EEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSR 147
           E+ T   DW D    EED GSPWEGAI+YKRN SI+H+EYCTTLERLGLGK S+E+SRSR
Sbjct: 93  EDETESYDWEDQEDVEEDAGSPWEGAIIYKRNPSITHLEYCTTLERLGLGKLSTEVSRSR 152

Query: 148 ASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIF 207
           ASAMGLRVTKAVKDY +GTPV IS+DVT+KK KLRLDGI+RTVL+L CNRCGEPA +S+F
Sbjct: 153 ASAMGLRVTKAVKDYPNGTPVQISIDVTKKKQKLRLDGIIRTVLTLGCNRCGEPATQSVF 212

Query: 208 SNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKE 267
           S+FS+LL+E+P+EEP++I++G MFGEDK KSSTG  +EE+DDDASID +DRL+FP EEKE
Sbjct: 213 SDFSVLLSEQPIEEPEIIDIGMMFGEDKSKSSTGNGSEEEDDDASIDWDDRLYFPLEEKE 272

Query: 268 IDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELR 327
           IDISK+IRDM+HLEIT+N +CDP CKG+C  CGTNLN   C+CSK+E     YGPLG LR
Sbjct: 273 IDISKNIRDMVHLEITINVICDPSCKGICLKCGTNLNTSTCNCSKEEVKGKTYGPLGNLR 332

Query: 328 KQMQQ 329
           KQM++
Sbjct: 333 KQMER 337

[Close]

BLAST of Spo20601.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGX2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072910 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 5.000e-170
Identity = 301/302 (99.67%), Postives = 301/302 (99.67%), Query Frame = 1


		  
Query: 28  MQNNSSLLWRPESAFIQYRYEIPNGISTSTCFGKPYNSFSAVLATKAVKADNGEVSSLDE 87
           MQNNSSLLWRPESAFIQYRYEIPNGISTSTCFGKPYNSFSAVLATKAVKADNGEVSSL E
Sbjct: 1   MQNNSSLLWRPESAFIQYRYEIPNGISTSTCFGKPYNSFSAVLATKAVKADNGEVSSLYE 60

Query: 88  EETTIDLDWGDEEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSRASAM 147
           EETTIDLDWGDEEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSRASAM
Sbjct: 61  EETTIDLDWGDEEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSRASAM 120

Query: 148 GLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIFSNFS 207
           GLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIFSNFS
Sbjct: 121 GLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIFSNFS 180

Query: 208 LLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKEIDIS 267
           LLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKEIDIS
Sbjct: 181 LLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKEIDIS 240

Query: 268 KHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELRKQMQ 327
           KHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELRKQMQ
Sbjct: 241 KHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELRKQMQ 300

Query: 328 QT 330
           QT
Sbjct: 301 QT 302

[Close]

BLAST of Spo20601.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EI41_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g203330 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.500e-142
Identity = 255/329 (77.51%), Postives = 286/329 (86.93%), Query Frame = 1


		  
Query: 1   MSLVYSLSTVTPVPRCHLKSEFQAKHHMQNNSSLLWRPESAFIQYRYEIPNGISTSTCFG 60
           MSLVYSLS+V+P      KS  QAK  M NN + LWRPESA++Q R  +P GISTS C G
Sbjct: 1   MSLVYSLSSVSP------KSVVQAKPQMPNNPTFLWRPESAYLQCRCRMPAGISTSACLG 60

Query: 61  KPYNSFSAVLATKAVKADNGEVSSLDEEETTIDLDWGDEEDEGSPWEGAIVYKRNSSISH 120
           KPYN  +  LATKA+K D+GEV S +E+E TID DW DEEDEGSPWEGAIVY+RN SISH
Sbjct: 61  KPYNFSNVFLATKALKIDDGEVLSFEEDEDTIDFDWADEEDEGSPWEGAIVYRRNPSISH 120

Query: 121 MEYCTTLERLGLGKTSSELSRSRASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLD 180
           +EYCTTLERLGLGK SSELSRS+ASAMGLRVTKAVKD+T+GTPVLISVDVTRKKHKLRLD
Sbjct: 121 LEYCTTLERLGLGKISSELSRSKASAMGLRVTKAVKDFTNGTPVLISVDVTRKKHKLRLD 180

Query: 181 GIMRTVLSLACNRCGEPAVESIFSNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVN 240
           GI+RTV+SL+CNRCGEPAVES+FSNF+LLLTEEPVEEPDVINMG +FGEDKLKSS  T N
Sbjct: 181 GIIRTVISLSCNRCGEPAVESVFSNFTLLLTEEPVEEPDVINMGLVFGEDKLKSSARTAN 240

Query: 241 --EEDDDDASIDLEDRLHFPPEEKEIDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGTN 300
             EE+DDDASID+EDRLHFPPE KEIDISKH+RDM+HLEIT+NAVCD KCKG+C  CGTN
Sbjct: 241 EEEEEDDDASIDIEDRLHFPPEIKEIDISKHLRDMLHLEITINAVCDSKCKGLCLKCGTN 300

Query: 301 LNIGICSCSKQETNDVGYGPLGELRKQMQ 328
           LNIG+C+CSKQE  DVGYGPLG+LRKQMQ
Sbjct: 301 LNIGVCNCSKQEIKDVGYGPLGDLRKQMQ 323

[Close]

BLAST of Spo20601.1 vs. UniProtKB/TrEMBL
Match: A0A067EP66_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021267mg PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.500e-97
Identity = 174/245 (71.02%), Postives = 209/245 (85.31%), Query Frame = 1


		  
Query: 88  EETTIDLDWGD----EEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSR 147
           E+ T   DW D    EED GSPWEGAI+YKRN SI+H+EYCTTLERLGLGK S+E+SRSR
Sbjct: 70  EDETESYDWEDQEDVEEDAGSPWEGAIIYKRNPSITHLEYCTTLERLGLGKLSTEVSRSR 129

Query: 148 ASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIF 207
           ASAMGLRVTKAVKDY +GTPV IS+DVT+KK KLRLDGI+RTVL+L CNRCGEPA +S+F
Sbjct: 130 ASAMGLRVTKAVKDYPNGTPVQISIDVTKKKQKLRLDGIIRTVLTLGCNRCGEPAAQSVF 189

Query: 208 SNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKE 267
           S+FS+LL+E+P+EEP++I++G MFGEDK KSSTG  +EE+DDDASID +DRL+FP EEKE
Sbjct: 190 SDFSVLLSEQPIEEPEIIHIGMMFGEDKSKSSTGNGSEEEDDDASIDWDDRLYFPLEEKE 249

Query: 268 IDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELR 327
           IDISK+IRDM+HLEIT+N +CDP CKG+C  CGTNLN   C+CSK+E     YGPLG LR
Sbjct: 250 IDISKNIRDMVHLEITINVICDPSCKGICLKCGTNLNTSTCNCSKEEVKGKTYGPLGNLR 309

Query: 328 KQMQQ 329
           KQM++
Sbjct: 310 KQMER 314

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BLAST of Spo20601.1 vs. UniProtKB/TrEMBL
Match: V4TGN4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032158mg PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.500e-97
Identity = 174/245 (71.02%), Postives = 209/245 (85.31%), Query Frame = 1


		  
Query: 88  EETTIDLDWGD----EEDEGSPWEGAIVYKRNSSISHMEYCTTLERLGLGKTSSELSRSR 147
           E+ T   DW D    EED GSPWEGAI+YKRN SI+H+EYCTTLERLGLGK S+E+SRSR
Sbjct: 70  EDETESYDWEDQEDVEEDAGSPWEGAIIYKRNPSITHLEYCTTLERLGLGKLSTEVSRSR 129

Query: 148 ASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKLRLDGIMRTVLSLACNRCGEPAVESIF 207
           ASAMGLRVTKAVKDY +GTPV IS+DVT+KK KLRLDGI+RTVL+L CNRCGEPA +S+F
Sbjct: 130 ASAMGLRVTKAVKDYPNGTPVQISIDVTKKKQKLRLDGIIRTVLTLGCNRCGEPAAQSVF 189

Query: 208 SNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTGTVNEEDDDDASIDLEDRLHFPPEEKE 267
           S+FS+LL+E+P+EEP++I++G MFGEDK KSSTG  +EE+DDDASID +DRL+FP EEKE
Sbjct: 190 SDFSVLLSEQPIEEPEIIDIGMMFGEDKSKSSTGNGSEEEDDDASIDWDDRLYFPLEEKE 249

Query: 268 IDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGTNLNIGICSCSKQETNDVGYGPLGELR 327
           IDISK+IRDM+HLEIT+N +CDP CKG+C  CGTNLN   C+CSK+E     YGPLG LR
Sbjct: 250 IDISKNIRDMVHLEITINVICDPSCKGICLKCGTNLNTSTCNCSKEEVKGKTYGPLGNLR 309

Query: 328 KQMQQ 329
           KQM++
Sbjct: 310 KQMER 314

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BLAST of Spo20601.1 vs. UniProtKB/TrEMBL
Match: D7U1Q0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00430 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.400e-95
Identity = 196/331 (59.21%), Postives = 233/331 (70.39%), Query Frame = 1


		  
Query: 1   MSLVYSLSTVTPVPRCHLKSEFQAKHHMQNNSSLLWRPESAFIQYRYEIPNGISTSTCFG 60
           MS V+S+S++ P         +++K     +      P  AF   +  I  GI   T   
Sbjct: 1   MSSVFSISSMVPSSNISHFKLYKSKCKSSPD------PNCAFTHCK--ISRGIPLITKSI 60

Query: 61  KPYNSFSAVLATKAVKADNGEVSSLDEEETTIDLDWGDE---EDEGSPWEGAIVYKRNSS 120
            P +      A K     N E  S DEE T    DW DE   ED GSPWEGA+VYKRN S
Sbjct: 61  HPISRNKPHSALKFTARYNFE--SFDEENTK-KFDWNDEREIEDTGSPWEGAVVYKRNPS 120

Query: 121 ISHMEYCTTLERLGLGKTSSELSRSRASAMGLRVTKAVKDYTDGTPVLISVDVTRKKHKL 180
           I H+E+CTTLERLGLGK S+E+S+SRAS MGLRVTKA KDY  GTPV IS+DVTRKKHKL
Sbjct: 121 ILHVEHCTTLERLGLGKLSTEISKSRASVMGLRVTKAAKDYPQGTPVHISIDVTRKKHKL 180

Query: 181 RLDGIMRTVLSLACNRCGEPAVESIFSNFSLLLTEEPVEEPDVINMGFMFGEDKLKSSTG 240
           RLDG++RTV++L CNRCGEPA E IFSNFSLLLTEEP+EE +VINMG +FGED  K  T 
Sbjct: 181 RLDGLLRTVITLGCNRCGEPAAECIFSNFSLLLTEEPIEEQEVINMGVIFGEDD-KLKTS 240

Query: 241 TVNEEDDDDASIDLEDRLHFPPEEKEIDISKHIRDMIHLEITMNAVCDPKCKGMCFNCGT 300
           T + E+DD+ASIDL+D L+FPPEE EIDISKHIRDM+HLEIT+NAVCD +CKG+C  CG 
Sbjct: 241 TESSEEDDEASIDLDDWLYFPPEETEIDISKHIRDMVHLEITINAVCDSRCKGICLKCGI 300

Query: 301 NLNIGICSCSKQETNDVGYGPLGELRKQMQQ 329
           NLN   C+CSK+E  + GYGPLG LRKQ+QQ
Sbjct: 301 NLNTASCNCSKEEVKEKGYGPLGVLRKQIQQ 319

[Close]

BLAST of Spo20601.1 vs. TAIR (Arabidopsis)
Match: AT3G19810.1 (Protein of unknown function (DUF177))

HSP 1 Score: 337.4 bits (864), Expect = 9.800e-93
Identity = 184/334 (55.09%), Postives = 231/334 (69.16%), Query Frame = 1


		  
Query: 1   MSLVYSLSTVTPVPRCHLKSEFQAKHHMQNNSSLLWRPESAFIQYRYEIPNGISTSTCFG 60
           MSLV SLS V P+P+             Q+  S L + E+  +      P G    T   
Sbjct: 1   MSLVCSLSCVAPLPQTK-----------QSRPSFL-KLETCTLSL--SSPAGYPNFTTGI 60

Query: 61  KPYNSFSAVLATKAVKADNGEVSSLDE---EETTIDLDWGDEE---DEGSPWEGAIVYKR 120
           + + S+      K  +     +    E   E +TID+DW D+E   D GSPWEG+++Y+R
Sbjct: 61  RKHISYLFTEPIKLPRLAKSRILVSQESFTETSTIDMDWEDQEEIEDTGSPWEGSVMYRR 120

Query: 121 NSSISHMEYCTTLERLGLGKTSSELSRSRASAMGLRVTKAVKDYTDGTPVLISVDVTRKK 180
           N+S++H+EYCTTLERLGLG+ S+++S+ RASAMGLRVTK VKDY DGTPV +SVDV RKK
Sbjct: 121 NASVTHVEYCTTLERLGLGRLSTDVSKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKK 180

Query: 181 HKLRLDGIMRTVLSLACNRCGEPAVESIFSNFSLLLTEEPVEEPDVINMGFMFGEDKLKS 240
            KLRLDGI+RTV++L CNRCGE   ESIFSNFSLLLTEEPVEEPDVI++GF FG DK + 
Sbjct: 181 KKLRLDGIVRTVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGNDKEEG 240

Query: 241 STGTVNEEDDDDASIDLEDRLHFPPEEKEIDISKHIRDMIHLEITMNAVCDPKCKGMCFN 300
                +++D+DD+ ID ED+LHFPPE KEIDISKHIRD++HLEIT+ A+CD  CKGMC  
Sbjct: 241 E----DDDDNDDSWIDWEDKLHFPPEVKEIDISKHIRDLVHLEITITAICDSACKGMCLK 300

Query: 301 CGTNLNIGICSCSKQETNDVGYGPLGELRKQMQQ 329
           CG NLN   C C ++E  D GYGPLG LR+QMQQ
Sbjct: 301 CGANLNKRKCDCGREE-KDKGYGPLGNLREQMQQ 315

The following BLAST results are available for this feature:

BLAST of Spo20601.1 vs. NCBI nr
BLAST of Spo20601.1 vs. UniProtKB/TrEMBL
BLAST of Spo20601.1 vs. ExPASy Swiss-Prot
BLAST of Spo20601.1 vs. TAIR (Arabidopsis)

BLAST of Spo20601.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902219058\|gb\|KNA18209.1\|	7.1e-170	99.6	hypothetical protein SOVF_0729...	[more]
gi\|731354704\|ref\|XP_010688741.1\|	2.2e-142	77.5	PREDICTED: uncharacterized pro...	[more]
gi\|641834009\|gb\|KDO53012.1\|	2.1e-97	71.0	hypothetical protein CISIN_1g0...	[more]
gi\|568862373\|ref\|XP_006484658.1\|	2.1e-97	71.0	PREDICTED: uncharacterized pro...	[more]
gi\|568862371\|ref\|XP_006484657.1\|	2.1e-97	71.0	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo20601.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RGX2_SPIOL	5.0e-170	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8EI41_BETVU	1.5e-142	77.5	Uncharacterized protein OS=Bet...	[more]
A0A067EP66_CITSI	1.5e-97	71.0	Uncharacterized protein OS=Cit...	[more]
V4TGN4_9ROSI	1.5e-97	71.0	Uncharacterized protein OS=Cit...	[more]
D7U1Q0_VITVI	1.4e-95	59.2	Putative uncharacterized prote...	[more]

BLAST of Spo20601.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo20601.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G19810.1	9.8e-93	55.0	Protein of unknown function (D...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003772	Protein of unknown function DUF177	PFAM	PF02620	DUF177	coord: 179..322 score: 2.3
None	No IPR available	PANTHER	PTHR34374	FAMILY NOT NAMED	coord: 10..329 score: 2.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0042793	plastid transcription
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0009451	RNA modification
biological_process	GO:0006396	RNA processing
biological_process	GO:0006457	protein folding
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0006412	translation
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0048481	plant ovule development
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0051607	defense response to virus
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016020	membrane
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16904	0.70	Barchart \| Table
Spo05510	0.69	Barchart \| Table
Spo27291	0.68	Barchart \| Table
Spo08533	0.67	Barchart \| Table
Spo14310	0.66	Barchart \| Table
Spo03609	0.66	Barchart \| Table
Spo09784	0.65	Barchart \| Table
Spo20889	0.65	Barchart \| Table
Spo21501	0.65	Barchart \| Table
Spo24153	0.65	Barchart \| Table
Spo05733	0.65	Barchart \| Table