Spo11834 (gene) | SpinachBase

Overview


Name	Spo11834
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr2 : 45415576 .. 45420844 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAGCTCACCAGTTGAGCCAGGAGGACCAAAAGCTATGACTGGTTCATTCACATTCCTTTTGCGACGTTTACCAGAATCAAGTGGAAGTGGATCGAGCGATCTCTCTTGCTCTGCTCGTTCTGCTGCCCGGTAAAGTAATGTTTGGTCGGCGACCCATGTAGCTGGATATATGAACTCTGTTTTTTTTTCAGAAAAACATGCTACATTCAGATAGTGATTGATTGCTTTTCAGATTCATTTTTTAATAATGTTGAGATGCAATTTAAGTTCTATGTATAAGATATGAAGTTGCTAACCAAATCCTTCGGCTGGTTGAATGCAGCGATTGATATACGGTAACGATCTAGTTATTTATTCTGTTTTGTATGTTTTCATATGCGTCCCTTGTTTGTGTATATATAGTACGTTGAAATCAGTTGGCAATTCTCTATTTGTTAGTGATCTAGTTGTTTTTTAGGCCTGGTTGAATCTGAAACATAACCATCAGAGGACTTTCCTTGAAGGCTACTCAGGAATTATTTTATAAATATGAACAACTCGCTATTCAACAAACACTTCTTTTAATTTCCTATGCAATATGGCTATCCCCTCCTCCTTTTGTAGTAAATCAAAAGTTTGAGTTCATTGCCTTATCGTAGAAGTACTTGTACTAATTCTAAACAATCTTGTAGGACTTTTCACTTTCTGCACTATTTTTCGATACTCTTTTGCTAAGGTCCTCCAGTTTACAGGGTTTTAACGTGTGATTTGGTCGAAGAAGAGGAAGTTTAAAGGAACCAAAAAGGAAACATAGAGCTAACGAACCTGAAGTTGTACTTACAAAAAAAGTATTTTGGAAGAGAATTAAAAGCTAAGGCAAATGGTTATTCGCCTTTGACAAGAAAACCTAGCTCTCTTCTCTGAGTTTCAGAAGAAATTCAAATCAGCTAAGCTGCGAATGCCACCAAATTGATTGAGGGAATAAAATGAAGCTCGTCATCTAATTTTCATGAGCTGCATAATATAGTATTATATGCTAGACTGCTTGTATTCCCAAGCCCTACTGTATTAGTAGTATTATTTTTCATATAGGTTGATAAGGGATGGATTAAGAAATAATCAGAGAATTTTTTTCATTGGCCACTTATCTCTCCTTGTAACATGAACTGAGGATCCTGATAAGTTTTTATGTATTAAGTGTAAAGTCTTGAGTTTGTAAGAAGTTTATGTAATATACAAAAGTATTATTGTTTTAGCATAATATAAGTAGCATTGAAGCAGGTGCATTGTTAGTCTCCTACAAGAATATCCAGAATTGAATGCAAATGCATTTCCATTTTTCAATCTATCCATTAACAACTAACAAAACTACCTAAATCGACATAAAAAGACACCTTATTATTGGTTTAACTTTTAAATGATTTTCTAAAACCTATGTTGGATACATAGTGAGAGGAACATCATCAATTACTGGAATGATCTATCTGGTGAGAAAGGAACACACTAGACCTGCAGCAGAACCACAACAACTACACAAAACGAAGCAATTACCTACTTTCAATGAGACCATATACACCAACAACAACTGATTAAAACAGGGCCAACACCCAACACTTGGACAGAACGAAACCAGCAGCCAAGAATCACCAACACCCGAACACCCAAAAAAAACTAGCAGCACATAAATTGCAACGGAAAGTACCAATATTTAGAATTAAAATCATCTAAAATAACCCATCAATCGATCACAAAATTGATTGATATTGTGGAATAAACCAAAAGAATCTGTAACTAAAGCATACGGTGCTTCATCCCTAATTAACTGAATCATACGATATCCTTAAGTAAAAAATACACACATGAATAAAATCAACACAATTTGTAACTTAGAAAACCCTAATTTAGGCCTCAAAACCACACAAAAAATTCAATTCGTAACTAGTTAATTAAACAACATAATTGTGAAATTTAAGACCTAATTCAAAGATATACATACCAACTAACCTGTTTCTTCTCGCCAATTAAGAAACGCAATTGGCCAATGTCTCTTTATCTCCAATTCTTAGACCCGATTTCCAATTCATAAAAGCCAATCTCCAATTCACCTTTGCTTCAGAAACGATGATGGAGAGGATCGAAAAGAAGGAAGTAGATGAAAGAGAAGAAGAAAAAAAACAGATGAAAGAAAAAAAACTAGGGTTCGGGACTTCGGGGGTGAAACTGAAGGGTTGGGATTTGGGAAGGAGGGAAACCAGATCTATGAAAACTTTCGATACTTACGTAGGTTTTCATTTTTTTTCTTATTTTTTTAAGATACTAATTACTAACCCATTGCAATTTTTCGTCAAAATATTTTTTTTTTAAAAAAAGTGTTGCAATAAAACAACCTTAATATACAATTGTTGCCATAGTTTTTCTATAGCAACATTTTTTCAAAGTCGAACTCTCCTGGAATTAATAATTATTTAACTGTTGCAATAACTATGATATAGTAACGCCAGTGAAACTGTTGCATAAAAGGGCGTTGCTATAGGCCTGTTTTGTAGTAGTGTTTTTTCTTCAGAATAAATAATGTTTTTGCTTGCATGTTAATATTTTACACGAGTATATGCTAATCGAATTCAAATAGTTTACTTTACTTCACCTTCTAAATTTAATTTTCTAATGTTAACAACCAAATCATCTTATTCTTTTTTCACTACATTAGGCTAAGTTTCTATGAAGTTTTATAATAATTGTGTTAATGTATTATATTGGGTTATTTGACCAAAAAGATTTTGTGTACGCTTTAGACGGAGTTTACTATGTTCGTTCTGTGTTCTTGAGTAATTAATTATGCTTAACAGTTATGTATTCATCTAATTAATAGGTCAAACGTCATTGTATGATGTATTAGTACTATATAATATATTTGGTATCTGTTAATATTCAATAATACTTTCATTGTTTATATAAGGATTTTTTGATATTTACCACCTTATAAGTTTCATGTTTTTGTATTTACCACCTTATAAGTTCAAAATTTACATTTACCACCTATAATTTATCAAATGTTTTACCTTTACCACCACTTAACAGATTTCATCCATTTTTCCATCCACTTGGGCCCACTCAACTAAATAATTAATTTCCCTCCTTTTTATCCTATTTCCTCACGTTTCAGTTTCCACGACATTAGGATCAAATTTGAGATCTCTCCTCCATCTATGCCTGAGACGTTTCTCTGGTTCAATATCAAAGAAAAAAAAAGTTAGAAGTTTCAAGGAGAATAATTAACACAATGGGTTTTTGTTCTCCATTATAGGAGAATGGCGCTAATATATTCATCGTCATCAATCTATCTAATTAACAGGTACTAATTCTCAAATTTTCTTTCTTTTTAATCTAGGGTTCATATGGAAATTGGGGATTTTTATTTTTTCACTTTTTTGTTGGAATTGTTTGTAGATATAATCAAGTTAATCCATAATAAACTAATTGAGATTGTTAATCTGTCTAAATAAGTAGGTATAGTTCTCAATTTTGTGTCTTATAAAATTTAGGGTTCATACATAAATCGAATTAGGGGTATTCAAATTTTCACTTAATTGTTAAAATTGTTGGTAGATAGCATCAATTTACTATATGATAAACTAACCGAAATTGTTAATTGTTGTTGGATTGTTAGGAAAATGACTCCATACTCGAAGTTAAGTCACCTTAATAACAAAGTAAGATTTAAGTGTGCAAAGCTTACCTCTTGGACCGGAGAAATTTTGGAGCATACATTTCTAGCTTTTCCTGTTGTATGAATGAGAAGAGGTTTTGACAAATTTTACTGGGTGGATGAAGACATCACTGACTGGCAAAGAGATGTTACAAATCAGCTAGTGTTGGATAAGAAGCTCCTGCAAATTGACTTGGCTATAATGCAAATGGAACTCAACTGTTTGACGGGGAACTGAGGGTTAAGTGCAAGAGTTTAAGCAATGCATTGATCAAGATTAAGAAGGGGAAAGGGACAACACCTGATGGCATGATGGTTATTGGCATATTTTGTGTTTTGGTACTAGTAGTTGTTGTTGTTGTTATCGTCATGGTTCTTTTTTAGGTTGATGTATGATCTATGAATTGCAAGGTTGTGCATTACATTGAATGAAATGAATCAAGTTCTTGGTTTTGAATATTGTGGAATATTTCTTTTTCAATGAAATGAATTATTCTGTTATCGGTTGTGTATTACATTTGATAGTGTGTAGTTGTTAAACCTCAGTGGTGTTGTGCGTGGTTGTTGGGTTGTGCTGTTGTTGTTGTTGTTGTAATTATGTCTTCCCGGCATGATAATTGTGGCAAAGAACACAATGCTGGCCAAAGTCAAGCTTGGTCAACTTTGGCCAGAATTGTTGCATGCAAATAGATCAACGAAATGCGGGCAACAACAATCCTGCAATCTGATGCAAACAGAATAACAACAATAAGTGTTCCCAAATATGAATGTACGTGATCCTGTACAATTTATTGCTGTATTTTTTTACCCTTTTTTCTTTAATAAAAAAGTGTATTGTTCAAATTTATGTGTTGCAACAATATTAATAAGCTAACAAGAGCTTCAAAAGCAGCAACAACGAGAAGCACAAACGGAAGAAACAAATAGCAACAAGCAGAAGCATCCATACACATCAACTCTTGTCAAAAGCTAAAGTCAACTAAGCTGTGAGGGAACATCAGATCTGATCTAGCAGATCACTTGAACAACAGCAGCTCAGGCTTGAACAAGTACACGTAAGACACTTGTTTACATAGTGAGGTAGATGTCATACACCATAGTTCAAAATAAGTTCAAATGACACTTGTTTACATGGAGTTAAGATTCTTTGTCTTCCTAGTTGGGAGTTTTTCCCTAAGTGGTTGTTGCTGCTGTTGTATTGGTTGATGTTGTGCTTGATTATGCTTCTGTCTTTTAGCAGGAAGAGCTGTAGTAGTAGAAGCATTTGATCGAGGACCTTGGCTACATGTTTGGATGGAAGGACCAGCGGCATCTCCAACAAGCTGTTGGAGAGACAGAAAAAAGGAAGCAAGTTAGACATACCAAAAAAAAAAAAAAACAGAAACAAAGAAGCAAGGTATCGTGAATTTGTCCTGAAATCATACCTTACTCAGTACCCTAGTCTCTTTCTTTTTTCTTTGATCCTTGACCCAAGGAGTATCCAATGGAGGTCTGCCACCTATTCCCTTGGGAATAACAGTAGGTGCAGTAACATAATTCTTGCACGATCTCTTGTTATGTCCTAATATCCCGCACTTGC

mRNA sequence

ATGTTAAGCTCACCAGTTGAGCCAGGAGGACCAAAAGCTATGACTGGTTCATTCACATTCCTTTTGCGACGTTTACCAGAATCAAGTGGAAGTGGATCGAGCGATCTCTCTTGCTCTGCTCGTTCTGCTGCCCGGAGAATGGCGCTAATATATTCATCGTCATCAATCTATCTAATTAACAGGAAAATGACTCCATACTCGAAGTTAAGTCACCTTAATAACAAAGTAAGATTTAAGTGTGCAAAGCTTACCTCTTGGACCGGAGAAATTTTGGAGCATACATTTCTAGCTTTTCCTGTTGTATGAATGAGAAGAGGTTTTGACAAATTTTACTGGGTGGATGAAGACATCACTGACTGGCAAAGAGATGTTACAAATCAGCTAGTGTTGGATAAGAAGCTCCTGCAAATTGACTTGGCTATAATGCAAATGGAACTCAACTGTTTGACGGGGAACTGAGGGTTAAGTGCAAGAGTTTAAGCAATGCATTGATCAAGATTAAGAAGGGGAAAGGGACAACACCTGATGGCATGATGGTTATTGGCATATTTTGTGTTTTGGTACTAGTAGTTGTTGTTGTTGTTATCGTCATGGTTCTTTTTTAGGTTGATGTATGATCTATGAATTGCAAGGTTGTGCATTACATTGAATGAAATGAATCAAGTTCTTGGTTTTGAATATTGTGGAATATTTCTTTTTCAATGAAATGAATTATTCTGTTATCGGTTGTGTATTACATTTGATAGTGTGTAGTTGTTAAACCTCAGTGGTGTTGTGCGTGGTTGTTGGGTTGTGCTGTTGTTGTTGTTGTTGTAATTATGTCTTCCCGGCATGATAATTGTGGCAAAGAACACAATGCTGGCCAAAGTCAAGCTTGGTCAACTTTGGCCAGAATTGTTGCATGCAAATAGATCAACGAAATGCGGGCAACAACAATCCTGCAATCTGATGCAAACAGAATAACAACAATAAGTGTTCCCAAATATGAATCAACAACGAGAAGCACAAACGGAAGAAACAAATAGCAACAAGCAGAAGCATCCATACACATCAACTCTTGTCAAAAGCTAAAGTCAACTAAGCTGTGAGGGAACATCAGATCTGATCTAGCAGATCACTTGAACAACAGCAGCTCAGGCTTGAACAAGTACACCAGGAAGAGCTGTAGTAGTAGAAGCATTTGATCGAGGACCTTGGCTACATGTTTGGATGGAAGGACCAGCGGCATCTCCAACAAGCTGTTGGAGAGACAGAAAAAAGGAAGCAAGTTAGACATACCAAAAAAAAAAAAAAACAGAAACAAAGAAGCAAGGTATCGTGAATTTGTCCTGAAATCATACCTTACTCAGTACCCTAGTCTCTTTCTTTTTTCTTTGATCCTTGACCCAAGGAGTATCCAATGGAGGTCTGCCACCTATTCCCTTGGGAATAACAGTAGGTGCAGTAACATAATTCTTGCACGATCTCTTGTTATGTCCTAATATCCCGCACTTGC

Coding sequence (CDS)

ATGTTAAGCTCACCAGTTGAGCCAGGAGGACCAAAAGCTATGACTGGTTCATTCACATTCCTTTTGCGACGTTTACCAGAATCAAGTGGAAGTGGATCGAGCGATCTCTCTTGCTCTGCTCGTTCTGCTGCCCGGAGAATGGCGCTAATATATTCATCGTCATCAATCTATCTAATTAACAGGAAAATGACTCCATACTCGAAGTTAAGTCACCTTAATAACAAAGTAAGATTTAAGTGTGCAAAGCTTACCTCTTGGACCGGAGAAATTTTGGAGCATACATTTCTAGCTTTTCCTGTTGTATGA

Protein sequence

MLSSPVEPGGPKAMTGSFTFLLRRLPESSGSGSSDLSCSARSAARRMALIYSSSSIYLINRKMTPYSKLSHLNNKVRFKCAKLTSWTGEILEHTFLAFPVV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11834.1	Spo11834.1	mRNA

Homology

The following BLAST results are available for this feature:

BLAST of Spo11834.1 vs. NCBI nr
BLAST of Spo11834.1 vs. UniProtKB/TrEMBL
BLAST of Spo11834.1 vs. ExPASy Swiss-Prot
BLAST of Spo11834.1 vs. TAIR (Arabidopsis)

BLAST of Spo11834.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo11834.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo11834.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo11834.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0050896	response to stimulus
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009555	pollen development
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0045277	respiratory chain complex IV
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0044425	membrane part
cellular_component	GO:0005746	mitochondrial respiratory chain
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016746	transferase activity, transferring acyl groups
molecular_function	GO:0004672	protein kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08114	0.73	Barchart \| Table
Spo23332	0.70	Barchart \| Table
Spo23712	0.70	Barchart \| Table
Spo11960	0.69	Barchart \| Table
Spo13171	0.69	Barchart \| Table
Spo05915	0.68	Barchart \| Table
Spo00878	0.68	Barchart \| Table
Spo19938	0.68	Barchart \| Table
Spo11524	0.68	Barchart \| Table
Spo13583	0.67	Barchart \| Table
Spo00667	0.67	Barchart \| Table
Spo00247	0.66	Barchart \| Table
Spo04383	0.66	Barchart \| Table
Spo16996	0.66	Barchart \| Table
Spo17337	0.66	Barchart \| Table
Spo22403	0.66	Barchart \| Table
Spo24331	0.66	Barchart \| Table
Spo25985	0.66	Barchart \| Table
Spo25659	0.65	Barchart \| Table
Spo11317	0.65	Barchart \| Table
Spo01925	0.65	Barchart \| Table
Spo28267	0.65	Barchart \| Table
Spo17880	0.65	Barchart \| Table
Spo21254	0.65	Barchart \| Table
Spo21446	0.65	Barchart \| Table