Spo18862 (gene)

Overview
NameSpo18862
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDUF1499 family protein
Locationchr2 : 47876360 .. 47878719 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAAAGTCTAAACACATATGGAGTAAGCTTTTTTTTTTCTTTTCAATTAGGCCTAATCAACATCTCCTTGGCCCAAGGAACCTTGGGGCCTCTATTTTCACCCAACAAGACAACCCATACTCCAAACCACTCATTAGCATTAAAAAAAAAATAAAAAAAAATTACTCCAAACCACTCAACACACACTTTTCAAAAGTCAAACATTCCTCCCAAGATTGGAGCTTGAAGCTTGTAATAATGGCATCAATGGCACATTCAATCAGTCACCATTTAACCCGCAAAAACACCATTCAACAACCAAAAACCCATCAATGTATGAACCTCCGCATCATTTCTTGTCAACAACATCAACCGCAACAACAACAACACAACCACCAGCGAAAACAGCAGCAGCAGAACAAGCCTGATGCCCAAATTAATCGGAGGGAAGTAATTCTCAGAAGCAGTGAACTTGCTACAATTGCAGCAATCTTCCATTTCAGGTTGTTTTTTCTCAATACCATTTTCCTTAATTATATGCTCAATAAGTATTTGTTGCTAATTTGATTTAAATTCTAATTTTAATCTGAATTGAACAGTGGAACAAAACCAAGCTATCTGGGTGTGCAAAAGAACCCACCTTCATTGGCTTTATGTCCCGCTACTAAAAACTGTCTTTCTACTTCTGAAAGTTCATCTGACACTGCCCATTATGCCCCTCCTTGGTAAGTTCAATTTGTTTGTTTCCATCATTTTCCAATTTTCAATTAGTTACTCAGTCACTACTGTAGGTTAGACAATTAGGCACTTAGGCACTTAGGCTAGCTTTGCTTGTTATTTACGGAGTAGTTAGTTACTCCCTCCTTAGTAGTTACTAGTTAGTACGACTTGAATTAGTTGTCATATTGATGTTATAACTTGGACTAATTATGTGACAACTAAATTTGAACGGAGGTGGTAATTCGAAAATGTATTTTCCACCCGTTTGTTATCCCCGTGAGGTTCGTTACATGTAGAATTTAATTAAGTTGTCATTTAGTTAATGGTAGGAACTCTAGGAAGTAAGGACTACTACATAATTTTTTAGGAAAGAATTTTTTTTCCATGTGTAAACATTTTATAGGAAGTACGAAATGTTGTTTGATTAAGTTGAATATGGGAAGTTTTATCAAAAAAAAAAAAAAAAAAGTTGAATATGGGAAGTAACTTCCTAGTGGGACTTAGGTAGGCCGTAGGCAGTGACTTCCCATGTTTTTGTAGACCAAACAATACCAATATACCACAATGTTCTACTTCCTAGAAAGTTTTAATTTTCACGATTTTTTAATGTCAACCAAAAAACACCTAAAAGTATTTATCTCCATTGGGGTAGAAATGTCATAAGATTTGAGAAGGTGAATTTGGAGATTTTGTTGGTTAATTAAGACATCCAAATGTTTGTTTCAATATCAAAAGGTTTCTGATTTTAGACTAGATAAAGATGGTCCATGCTAATGGGATTTGTTATAATTGCACCTGGCAGGAACTACAACCCTGAAGATGGGAGAGGAAGCAAGAATCCTGTTAGCAGAGAAGTAGCAATGCAGGAGCTTCTTGCTGTTGTAAGGTTTCCTTACAAAACAGTCCATTAAAATTACTGGCGTTTTCGTGGTAAATTAACGCGTAATCAATGCATTTGCAGATTGAATCAACAAAACCAGATAGATTCACACCCAAGACTATGGAGAAAAGAGATGATTATGTGCGTGTGGAGTATGAAAGTCCAATAATGGGGGTAAGTTATTAGCACAAAAATGTACAAGTACTGCTTGATAGAAGCATTGGTACAACTATTGACTTGCAGAACATGTGCTTTCATTTGTGTAGTTTGTTGACGATGTTGAGTTCTGGTTTCCACCGGGAAAGAAGTCAATTGTGCAGTATCGTTCTGCATCTCGTCTAGGGAGTTTTGATTTCGATGTGAATCGAAAAAGAATCAAGGTGAGAAGGGGTGTCATTATGTAGTCAGTTTCAGATTCCATGTTAGTTTTGGTTTAGATTATCTTGTATATATTCTCTTCAGAATGGTTCCTGACGAGTGGTTATTGATGCAGGCGTTGAGGCAAGGGCTGGAGAAGAAAGGATGGGCTTCAGAAAATACTTACTAATTATAGTTCATGAAGTCTCATTGTAAGTAGGAGATTCCGTTATTCCCATAGTTTCCAATCCATTTCCTCCTACAAATGAACAATTATTATAGAACAAGAAATGCCAAAGTGGATTCTAACTATTGAAAAGACTTAGCCAAAGAGGTGAAAACATATTTGTTTGTACACCATCTTCTGGATTTGAATGTACTGCTTGCTTCTGAAGAAAGAATACTTCCAAGTTGAATCTTCCG

mRNA sequence

TCTAAAGTCTAAACACATATGGAGTAAGCTTTTTTTTTTCTTTTCAATTAGGCCTAATCAACATCTCCTTGGCCCAAGGAACCTTGGGGCCTCTATTTTCACCCAACAAGACAACCCATACTCCAAACCACTCATTAGCATTAAAAAAAAAATAAAAAAAAATTACTCCAAACCACTCAACACACACTTTTCAAAAGTCAAACATTCCTCCCAAGATTGGAGCTTGAAGCTTGTAATAATGGCATCAATGGCACATTCAATCAGTCACCATTTAACCCGCAAAAACACCATTCAACAACCAAAAACCCATCAATGTATGAACCTCCGCATCATTTCTTGTCAACAACATCAACCGCAACAACAACAACACAACCACCAGCGAAAACAGCAGCAGCAGAACAAGCCTGATGCCCAAATTAATCGGAGGGAAGTAATTCTCAGAAGCAGTGAACTTGCTACAATTGCAGCAATCTTCCATTTCAGTGGAACAAAACCAAGCTATCTGGGTGTGCAAAAGAACCCACCTTCATTGGCTTTATGTCCCGCTACTAAAAACTGTCTTTCTACTTCTGAAAGTTCATCTGACACTGCCCATTATGCCCCTCCTTGGAACTACAACCCTGAAGATGGGAGAGGAAGCAAGAATCCTGTTAGCAGAGAAGTAGCAATGCAGGAGCTTCTTGCTGTTATTGAATCAACAAAACCAGATAGATTCACACCCAAGACTATGGAGAAAAGAGATGATTATGTGCGTGTGGAGTATGAAAGTCCAATAATGGGGTTTGTTGACGATGTTGAGTTCTGGTTTCCACCGGGAAAGAAGTCAATTGTGCAGTATCGTTCTGCATCTCGTCTAGGGAGTTTTGATTTCGATGTGAATCGAAAAAGAATCAAGGCGTTGAGGCAAGGGCTGGAGAAGAAAGGATGGGCTTCAGAAAATACTTACTAATTATAGTTCATGAAGTCTCATTGTAAGTAGGAGATTCCGTTATTCCCATAGTTTCCAATCCATTTCCTCCTACAAATGAACAATTATTATAGAACAAGAAATGCCAAAGTGGATTCTAACTATTGAAAAGACTTAGCCAAAGAGGTGAAAACATATTTGTTTGTACACCATCTTCTGGATTTGAATGTACTGCTTGCTTCTGAAGAAAGAATACTTCCAAGTTGAATCTTCCG

Coding sequence (CDS)

ATGGCATCAATGGCACATTCAATCAGTCACCATTTAACCCGCAAAAACACCATTCAACAACCAAAAACCCATCAATGTATGAACCTCCGCATCATTTCTTGTCAACAACATCAACCGCAACAACAACAACACAACCACCAGCGAAAACAGCAGCAGCAGAACAAGCCTGATGCCCAAATTAATCGGAGGGAAGTAATTCTCAGAAGCAGTGAACTTGCTACAATTGCAGCAATCTTCCATTTCAGTGGAACAAAACCAAGCTATCTGGGTGTGCAAAAGAACCCACCTTCATTGGCTTTATGTCCCGCTACTAAAAACTGTCTTTCTACTTCTGAAAGTTCATCTGACACTGCCCATTATGCCCCTCCTTGGAACTACAACCCTGAAGATGGGAGAGGAAGCAAGAATCCTGTTAGCAGAGAAGTAGCAATGCAGGAGCTTCTTGCTGTTATTGAATCAACAAAACCAGATAGATTCACACCCAAGACTATGGAGAAAAGAGATGATTATGTGCGTGTGGAGTATGAAAGTCCAATAATGGGGTTTGTTGACGATGTTGAGTTCTGGTTTCCACCGGGAAAGAAGTCAATTGTGCAGTATCGTTCTGCATCTCGTCTAGGGAGTTTTGATTTCGATGTGAATCGAAAAAGAATCAAGGCGTTGAGGCAAGGGCTGGAGAAGAAAGGATGGGCTTCAGAAAATACTTACTAA

Protein sequence

MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18862.1Spo18862.1mRNA


Homology
[Close]
BLAST of Spo18862.1 vs. NCBI nr
Match: gi|902231493|gb|KNA22274.1| (hypothetical protein SOVF_035180 [Spinacia oleracea])

HSP 1 Score: 472.6 bits (1215), Expect = 3.900e-130
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1 

		  

Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI 60
           MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI
Sbjct: 1   MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI 60

Query: 61  NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY 120
           NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY
Sbjct: 61  NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY 120

Query: 121 APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM 180
           APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM
Sbjct: 121 APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM 180

Query: 181 GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY
Sbjct: 181 GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 236
[Close]
BLAST of Spo18862.1 vs. NCBI nr
Match: gi|731361270|ref|XP_010692264.1| (PREDICTED: uncharacterized protein LOC104905415 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 353.2 bits (905), Expect = 3.500e-94
Identity = 183/240 (76.25%), Postives = 197/240 (82.08%), Query Frame = 1 

		  

Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMN----LRIISCQQHQPQQQQHNHQRKQQQQNKP 60
           MASMA+SIS+H   KN IQ+  THQ +N    LRI SCQ+ Q QQ               
Sbjct: 25  MASMAYSISYHYNHKNIIQR-NTHQSINFPLQLRIFSCQEEQQQQ--------------- 84

Query: 61  DAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSD 120
             ++NRREVILRSSELAT+ AIFHFSGTKPSYLGVQKNPPSLALCPATKNC+STSE+SSD
Sbjct: 85  --KLNRREVILRSSELATLGAIFHFSGTKPSYLGVQKNPPSLALCPATKNCISTSENSSD 144

Query: 121 TAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYE 180
             HY PPWNYNPE GRGSK PVSREVAMQELLAVIESTKPD FTP+ M+K+DDYVRVEYE
Sbjct: 145 LTHYTPPWNYNPEGGRGSKKPVSREVAMQELLAVIESTKPDNFTPRIMDKKDDYVRVEYE 204

Query: 181 SPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           SPIMGFVDDVEFWFPPG KSIV YRSASRLGSFDFDVNRKRIKALR+ LE KGWASENTY
Sbjct: 205 SPIMGFVDDVEFWFPPGNKSIVGYRSASRLGSFDFDVNRKRIKALRKELENKGWASENTY 246
[Close]
BLAST of Spo18862.1 vs. NCBI nr
Match: gi|870847755|gb|KMT00103.1| (hypothetical protein BVRB_1g019270 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 353.2 bits (905), Expect = 3.500e-94
Identity = 183/240 (76.25%), Postives = 197/240 (82.08%), Query Frame = 1 

		  

Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMN----LRIISCQQHQPQQQQHNHQRKQQQQNKP 60
           MASMA+SIS+H   KN IQ+  THQ +N    LRI SCQ+ Q QQ               
Sbjct: 1   MASMAYSISYHYNHKNIIQR-NTHQSINFPLQLRIFSCQEEQQQQ--------------- 60

Query: 61  DAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSD 120
             ++NRREVILRSSELAT+ AIFHFSGTKPSYLGVQKNPPSLALCPATKNC+STSE+SSD
Sbjct: 61  --KLNRREVILRSSELATLGAIFHFSGTKPSYLGVQKNPPSLALCPATKNCISTSENSSD 120

Query: 121 TAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYE 180
             HY PPWNYNPE GRGSK PVSREVAMQELLAVIESTKPD FTP+ M+K+DDYVRVEYE
Sbjct: 121 LTHYTPPWNYNPEGGRGSKKPVSREVAMQELLAVIESTKPDNFTPRIMDKKDDYVRVEYE 180

Query: 181 SPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           SPIMGFVDDVEFWFPPG KSIV YRSASRLGSFDFDVNRKRIKALR+ LE KGWASENTY
Sbjct: 181 SPIMGFVDDVEFWFPPGNKSIVGYRSASRLGSFDFDVNRKRIKALRKELENKGWASENTY 222
[Close]
BLAST of Spo18862.1 vs. NCBI nr
Match: gi|661878472|emb|CDP17774.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 308.5 bits (789), Expect = 9.900e-81
Identity = 155/204 (75.98%), Postives = 174/204 (85.29%), Query Frame = 1 

		  

Query: 30  RIISCQQHQPQQQQHNHQRKQQQQNKPDAQINRREVILRSSELATIAAIFHFSGTKPSYL 89
           RII  +Q QPQ Q      + Q QN+   Q  RRE++LRSSELA + AIFHFSGTKP+YL
Sbjct: 30  RIIRAEQLQPQPQP-----QPQPQNQ---QAGRREIVLRSSELAVLGAIFHFSGTKPNYL 89

Query: 90  GVQKNPPSLALCPATKNCLSTSESSSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLA 149
           G+QKNPPSLALCPAT NC+STSE++SD  HYAPPWNYNPE+GRGS NPVSREVAMQELL 
Sbjct: 90  GIQKNPPSLALCPATNNCVSTSENTSDLTHYAPPWNYNPEEGRGSTNPVSREVAMQELLE 149

Query: 150 VIESTKPDRFTPKTMEKRDDYVRVEYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSF 209
            I+STKPD F P+ +E++DDYVRVEYESPIMGFVDDVEFWFPPGKKS+VQYRSASRLG+F
Sbjct: 150 AIKSTKPDNFNPRIVEQKDDYVRVEYESPIMGFVDDVEFWFPPGKKSLVQYRSASRLGNF 209

Query: 210 DFDVNRKRIKALRQGLEKKGWASE 234
           DFDVNRKRIKALR  LEKKGWASE
Sbjct: 210 DFDVNRKRIKALRLKLEKKGWASE 225
[Close]
BLAST of Spo18862.1 vs. NCBI nr
Match: gi|747090997|ref|XP_011093210.1| (PREDICTED: uncharacterized protein LOC105173228 [Sesamum indicum])

HSP 1 Score: 303.5 bits (776), Expect = 3.200e-79
Identity = 159/237 (67.09%), Postives = 177/237 (74.68%), Query Frame = 1 

		  

Query: 1   MASMAHSISHHLTRKNTIQQPKT--HQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDA 60
           MASMA S +H  T K     PK+  +    L I+S  Q      Q  H +          
Sbjct: 1   MASMASSSTHFYTHKTYKTNPKSSLNPLFKLSILSHHQEDEPPIQTTHPK---------- 60

Query: 61  QINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTA 120
              RRE++LR SE+A + AIFHFSGTKP+YLGVQKNP  LALCPAT NC+STSE+ SD  
Sbjct: 61  --GRREIMLRCSEVAVLGAIFHFSGTKPNYLGVQKNPGGLALCPATNNCVSTSENISDLT 120

Query: 121 HYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESP 180
           HYAPPWNYNPE+GRGSK PVSRE AM+ELL VI+STKPD FTPK  EKRDDYVRVEYESP
Sbjct: 121 HYAPPWNYNPEEGRGSKKPVSREQAMEELLQVIKSTKPDNFTPKIAEKRDDYVRVEYESP 180

Query: 181 IMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENT 236
           IMGFVDDVEFWFPPGKK IVQYRSASR G+FDFD+NRKRIKALR  LEKKGWASEN+
Sbjct: 181 IMGFVDDVEFWFPPGKKPIVQYRSASRFGNFDFDINRKRIKALRLALEKKGWASENS 225
[Close]
BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_035180 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 2.800e-130
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1 

		  

Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI 60
           MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI
Sbjct: 1   MASMAHSISHHLTRKNTIQQPKTHQCMNLRIISCQQHQPQQQQHNHQRKQQQQNKPDAQI 60

Query: 61  NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY 120
           NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY
Sbjct: 61  NRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAHY 120

Query: 121 APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM 180
           APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM
Sbjct: 121 APPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPIM 180

Query: 181 GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY
Sbjct: 181 GFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 236
[Close]
BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJ74_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019270 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.400e-94
Identity = 183/240 (76.25%), Postives = 197/240 (82.08%), Query Frame = 1 

		  

Query: 1   MASMAHSISHHLTRKNTIQQPKTHQCMN----LRIISCQQHQPQQQQHNHQRKQQQQNKP 60
           MASMA+SIS+H   KN IQ+  THQ +N    LRI SCQ+ Q QQ               
Sbjct: 1   MASMAYSISYHYNHKNIIQR-NTHQSINFPLQLRIFSCQEEQQQQ--------------- 60

Query: 61  DAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSD 120
             ++NRREVILRSSELAT+ AIFHFSGTKPSYLGVQKNPPSLALCPATKNC+STSE+SSD
Sbjct: 61  --KLNRREVILRSSELATLGAIFHFSGTKPSYLGVQKNPPSLALCPATKNCISTSENSSD 120

Query: 121 TAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYE 180
             HY PPWNYNPE GRGSK PVSREVAMQELLAVIESTKPD FTP+ M+K+DDYVRVEYE
Sbjct: 121 LTHYTPPWNYNPEGGRGSKKPVSREVAMQELLAVIESTKPDNFTPRIMDKKDDYVRVEYE 180

Query: 181 SPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           SPIMGFVDDVEFWFPPG KSIV YRSASRLGSFDFDVNRKRIKALR+ LE KGWASENTY
Sbjct: 181 SPIMGFVDDVEFWFPPGNKSIVGYRSASRLGSFDFDVNRKRIKALRKELENKGWASENTY 222
[Close]
BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A068VB46_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003890001 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.900e-81
Identity = 155/204 (75.98%), Postives = 174/204 (85.29%), Query Frame = 1 

		  

Query: 30  RIISCQQHQPQQQQHNHQRKQQQQNKPDAQINRREVILRSSELATIAAIFHFSGTKPSYL 89
           RII  +Q QPQ Q      + Q QN+   Q  RRE++LRSSELA + AIFHFSGTKP+YL
Sbjct: 30  RIIRAEQLQPQPQP-----QPQPQNQ---QAGRREIVLRSSELAVLGAIFHFSGTKPNYL 89

Query: 90  GVQKNPPSLALCPATKNCLSTSESSSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLA 149
           G+QKNPPSLALCPAT NC+STSE++SD  HYAPPWNYNPE+GRGS NPVSREVAMQELL 
Sbjct: 90  GIQKNPPSLALCPATNNCVSTSENTSDLTHYAPPWNYNPEEGRGSTNPVSREVAMQELLE 149

Query: 150 VIESTKPDRFTPKTMEKRDDYVRVEYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSF 209
            I+STKPD F P+ +E++DDYVRVEYESPIMGFVDDVEFWFPPGKKS+VQYRSASRLG+F
Sbjct: 150 AIKSTKPDNFNPRIVEQKDDYVRVEYESPIMGFVDDVEFWFPPGKKSLVQYRSASRLGNF 209

Query: 210 DFDVNRKRIKALRQGLEKKGWASE 234
           DFDVNRKRIKALR  LEKKGWASE
Sbjct: 210 DFDVNRKRIKALRLKLEKKGWASE 225
[Close]
BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A061DTW5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_005508 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.500e-77
Identity = 146/189 (77.25%), Postives = 162/189 (85.71%), Query Frame = 1 

		  

Query: 48  RKQQQQNKPDAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNC 107
           + QQ  N+ D QI RRE+ILRSSELA I AIF FSG KP YLGVQKNPP+LALCPATKNC
Sbjct: 37  QSQQSDNQSDNQIPRREIILRSSELAVIGAIFSFSGKKPDYLGVQKNPPALALCPATKNC 96

Query: 108 LSTSESSSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKR 167
           +STSE+ SD  HY PPWNYN   GR  K PV+REVAM+ELL VI+STKPD+FTPK +EK+
Sbjct: 97  VSTSENVSDLTHYTPPWNYN--GGRNRKKPVTREVAMEELLQVIKSTKPDKFTPKIVEKK 156

Query: 168 DDYVRVEYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEK 227
           DDYVRVEYES I+GFVDDVEFWFPPGK SIV+YRSASR+GSFDFDVNRKRIKALRQ LEK
Sbjct: 157 DDYVRVEYESLILGFVDDVEFWFPPGKNSIVEYRSASRIGSFDFDVNRKRIKALRQELEK 216

Query: 228 KGWASENTY 237
           KGWASE T+
Sbjct: 217 KGWASEETF 223
[Close]
BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Match: A0A061DU26_THECC (Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_005508 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.000e-77
Identity = 144/183 (78.69%), Postives = 159/183 (86.89%), Query Frame = 1 

		  

Query: 54  NKPDAQINRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSES 113
           N+ D QI RRE+ILRSSELA I AIF FSG KP YLGVQKNPP+LALCPATKNC+STSE+
Sbjct: 1   NQSDNQIPRREIILRSSELAVIGAIFSFSGKKPDYLGVQKNPPALALCPATKNCVSTSEN 60

Query: 114 SSDTAHYAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRV 173
            SD  HY PPWNYN   GR  K PV+REVAM+ELL VI+STKPD+FTPK +EK+DDYVRV
Sbjct: 61  VSDLTHYTPPWNYN--GGRNRKKPVTREVAMEELLQVIKSTKPDKFTPKIVEKKDDYVRV 120

Query: 174 EYESPIMGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASE 233
           EYES I+GFVDDVEFWFPPGK SIV+YRSASR+GSFDFDVNRKRIKALRQ LEKKGWASE
Sbjct: 121 EYESLILGFVDDVEFWFPPGKNSIVEYRSASRIGSFDFDVNRKRIKALRQELEKKGWASE 180

Query: 234 NTY 237
            T+
Sbjct: 181 ETF 181
[Close]
BLAST of Spo18862.1 vs. TAIR (Arabidopsis)
Match: AT3G60810.1 (unknown protein)

HSP 1 Score: 254.2 bits (648), Expect = 7.800e-68
Identity = 127/177 (71.75%), Postives = 144/177 (81.36%), Query Frame = 1 

		  

Query: 60  INRREVILRSSELATIAAIFHFSGTKPSYLGVQKNPPSLALCPATKNCLSTSESSSDTAH 119
           I RR++ILRSSELA I AIF  SG KP YLGVQKN   LALCPAT NC+STSE+ SD  H
Sbjct: 43  IGRRDIILRSSELAMIGAIFQLSGKKPDYLGVQKNE-RLALCPATNNCISTSENISDRVH 102

Query: 120 YAPPWNYNPEDGRGSKNPVSREVAMQELLAVIESTKPDRFTPKTMEKRDDYVRVEYESPI 179
           YAPPWNYN     G K PV+R+VAM+ELL VI+S KPD+FTP+ +EK+DDYV VEYESPI
Sbjct: 103 YAPPWNYNG----GRKTPVNRQVAMKELLNVIKSVKPDKFTPRIVEKKDDYVHVEYESPI 162

Query: 180 MGFVDDVEFWFPPGKKSIVQYRSASRLGSFDFDVNRKRIKALRQGLEKKGWASENTY 237
           +G VDDVEF F PGK S V+YRSASR G+FDFDVNRKRIKALRQ LEKKGW SEN++
Sbjct: 163 LGLVDDVEFLFTPGKNSKVEYRSASRKGNFDFDVNRKRIKALRQELEKKGWVSENSF 214
The following BLAST results are available for this feature:
BLAST of Spo18862.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902231493|gb|KNA22274.1|3.9e-130100.hypothetical protein SOVF_0351... [more]
gi|731361270|ref|XP_010692264.1|3.5e-9476.2PREDICTED: uncharacterized pro... [more]
gi|870847755|gb|KMT00103.1|3.5e-9476.2hypothetical protein BVRB_1g01... [more]
gi|661878472|emb|CDP17774.1|9.9e-8175.9unnamed protein product [Coffe... [more]
gi|747090997|ref|XP_011093210.1|3.2e-7967.0PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo18862.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RTN3_SPIOL2.8e-130100.Uncharacterized protein OS=Spi... [more]
A0A0J8BJ74_BETVU2.4e-9476.2Uncharacterized protein OS=Bet... [more]
A0A068VB46_COFCA6.9e-8175.9Uncharacterized protein OS=Cof... [more]
A0A061DTW5_THECC3.5e-7777.2Uncharacterized protein isofor... [more]
A0A061DU26_THECC6.0e-7778.6Uncharacterized protein isofor... [more]
back to top
BLAST of Spo18862.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo18862.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G60810.17.8e-6871.7unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010865Protein of unknown function DUF1499PFAMPF07386DUF1499coord: 98..224
score: 1.7
NoneNo IPR availablePANTHERPTHR34801FAMILY NOT NAMEDcoord: 8..236
score: 3.2E
NoneNo IPR availablePANTHERPTHR34801:SF1SUBFAMILY NOT NAMEDcoord: 8..236
score: 3.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0006772 thiamine metabolic process
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009229 thiamine diphosphate biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0044260 cellular macromolecule metabolic process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0016301 kinase activity
molecular_function GO:0030975 thiamine binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004788 thiamine diphosphokinase activity
RNA-Seq Expression