Spo00417 (gene) | SpinachBase

Overview


Name	Spo00417
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	BnaA04g26250D protein
Location	chr2 : 48391107 .. 48395152 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTTTCACACATCGCATTGGAGTTAAGAGTTGATCGCTTGAAAGTTGAAAGGCTTGAGAAGAAAGAGAGAGAAAAGATGGGAGGGAAAGCGAGGAAGAGGAGAGAGAAAAACTACCTAGCTGCTCATGGCGGCAACAAACTCCTCCCGCCGCCACCCAATACTTCTTCAATTGACGCTTTGCCCTCTAAACTTCGCAAACTCATGTCTCTTGTTTCCTCTCCCGCCCCTACCCGTCAAGGTTTAGTTTTTATTTTCACTCTTCTTTAAATTTTGAATCTTCCCCAAGTACTTTGAAATAATGGGGTTTTTGTGTATGTTTTCAGGGTCTGCAATTGATTTGGGAAATACTCAAAGGAAGAGCAAGAAAGAGGACATCACTGAAAATGTAAGTTTTAAGTTTTGTTTTCTAATCTTCGATTTTTATTGTAATTTGAAGAAACTCGAGCAATTTTTCGATTACCCATTTTTATAAATTGCATATTGGATAATATTGTAGCTTTAATCATTAAATGATAATGTCAACAAAATACTGTTTAATGAAATTGAAGCATTTGCATTGTAGGAGTATGAAGGACTATTGATTCTGTGTAATTTCGGTTTTAGTGTTTGCATATGGTACCTGTAGAGGCATTACTCAAAGCTTGTGTTATCCCTTGCCGGGTTGCGTTTAGAAACTAAATAAGTAAATGGCTCTGGCAAATTCTGAAACCTTAGTCTAGGGTTATAAAATTTCTAATGCTAGTACTCTGTGCTCTGCATTTGATCAGATATTGATTCTGGGCATGATTTGCTATGACTTTGGACCTTGTTGAGTAATTGTTGAACTTCAGAGGGGGGGGGGGGGGGNGGGGGGTTGTTGTTTCCGAAAGGAAGTCGTTAATGGATGGAGTGAGATTGAATGCTAGATTAAAATGGTGTTCTAGTCCTCAAGTTTACTATTTTCTATAAGGTTTTAGGTTGAGAGGTACCTTAATTTGGACTTTAAGAGGATTCTGCAATCCTTTATGCTTCCTCCATTTTTTACAAGTAGGCATTTTACAGCCCCTTTCTGCTCAACTTTCTTTCATCACAAACAAGAAGATTGGATCTCTACTTGTACCGTTGTGTTCCATTTTGGAGTTGTAAGAAAGTGAGACTACATTGAGCCGTCAACTCGTGATTAGCAAACTTTTTTCAACTAAAGCTTACTGTCTATTCTGGTGAAAAGATTTGTCAAATGGTCGGTTGAAAGGATATGGACATTCAATAAGTTATTCATCTTGGAAATTTGTAGAGGCTACTTTGCAGCATCAGTCTCCACTTGACTTTATTATCCTTCTATGTTATTATTGGATTGGCATTGTGTTGCTTATACTGATAGCAAGCGCTGATTACGTTGCTTATACTGTTACCAAGCACTGACTACGTTGCTTATACTGTTACCAAGCACTGACTGTGTTGCTTATACTGAATCACTGATAGCAGGCACTTATTGCGTTTCTTATACTGATACAAGCATGTGCATTGCTTATTTAGTCTTACCTCTTCCTTCTTCCCTCTTGCTTGTGAGATATTCATTGCTAAGAAAGATCTGGATTTAGATGCCCATAAAAGACTTTAATATTGTACTCACGAAATCTTAACCAGGAAAGCTTATGACATTACCAATGAAATCTTGGACACTCGAAAGCTCATGTTAATAAATGAAGGCTCTTGTATTTTTTCGGCTCACCAACATGTTAGATGGAAAAATGGACTCTTTTTTTCGAGACTTTTTTGTTATCTTGGTCCTTAAGCATGTATTTTGTAAAATACTAGATATATGCCCATAAGATGATTTTTCCGACAGATGAATGAATGGTGTTTACGTTATTAAATATATAGCACAGGCATTATGGCATAAAGCGCACATTAGTTGCTTCGCCCCAGATAAGAAGATATAAATGCACAGTATTATCCTTAGCTGAACTTCCTGCTGTCCCTGAGGGAGACAATAAAGATAAAAAAAAGTCGAATATAAATCAATTGAATTACAATCATGAGAGCCAGAACAAACTAACTCCTTGATCAGTAATGTGGTAAAATCATAAGCATTTAGGACAGAGACTGAAATATTGCAACTTAAACTGTGTTTTCGTGCCAAATACTTGCACCAGGTTTTGTAGTTTTAGAAAAGCTTGTTCATAACGGCATCAACAGATCGATCATCAGCTGCTCATAGACAATGAGTTCACCAAAACCCTGATTTTTAATTATTGGGATAAAAAGCCAATTATTTAAGATATTACGCTTGTTAAGTGCAATGCCGATGCAGTGGTATCGACCCTATAGATAAAACCAACACAACACAGTCACACTATCAGACGTTAAAAAGTTTACTAGTTTGTTCAGATGCTACTCTGTATCCTTTCGATGGCCTATGTTGTGTTGAAGCTTGAAAGGATGTCTATATGATCTGGTTGATTACGTAAAGCCCGTGGTGGCAAGAGAAGCGGGGAAAGTACACAGAGAAGACATATCTTTTCTGCTGGATCTTTCCCACAAGTTACTTAACCCAAAGGATCCTTACTGTTCAACCCAATTTTGTTCTTTCTCTGTGTCTGTTGAGGATTATAACTGTATCAAAACACCAAAGTTCTAATTTCTGATAGGAGAAATATGGCCTATGCGAGCATATGTCCTATGATCTACATTATGTTTCCGTAAGTGTAATGATTTTGTAAATTTGAAGTTTGATTGAAAAACTTATTTGCAGAAACCTCTCCCAAAAATTAAGATGGACGGTAAAAGCAGGGGAATTGGAAGTACAAGAATGCCACAAGGAACAGTGATTACTGATGCAAATGACGAGAAAAAGAATAAGAAAAGAAAGAGAAAGCAGGCAAAGGACCTCCGGTTTGAAACGGAGCTGGAAAAGTTGGACGGCGTTTCAACAAGAAAGCAGCGGAAAAAAGAGTAAGTCTTCTCTGTATATTTTGTACTTGAACAGAGTTGGATTGTTGGATTCATCATAATAGCTGTAGAATGACCCAGTAGTGAACACAATAGAATTAAGTGATTACAGAGTTGGATTGTTGCGTTCGTCATAATAGTCTGTAGAAGGACCTAGAAATGATAAAGGGGAAAACCCCGAATAGGAAAGGATGAAAGTTTCCCTGGTAAATCAGAGATGATATGATCTCTCAAGCGATTTGAGTATGATATGTGCTTCTTTTTTTGGGTGCATATGAACTTGTGTGAATCAAGCCATGTTTTGATGCAGGTTTCTAAAAGCTAAGAAAAAGAAACAAAAGAAAAGCAGTTCAGAGCATAATCTTGACCTTCCGAAACATGATGAAGTCAAATTTGGAGAGGTTGCTGAAGCTCCACCAAAGTTGACAATTCCTGTAAGGAGCATCTAATCTACCCATTATTGCAGTGTGTATATTATTAGAACATCTATTAACCAAAGCCGCTCTTTGCTTATGCAGGCATTCAAGAAACCTATGGATGCTTCACTTGAGAGGCGACGTTTGCTGGCTATTGAGGCCTATAGAAATCGTAAAGGGTGGACTAGTAGACCGGGAATTCATCTTCCTCCTGTGAGCTCATCATCCCCAGATTTTGTTTGATATCTGCTATACCGTGGCCACTCTTTTTTTTCTTTTTTTTGTGGTACTAAGACAAGACTGTGTTTACTGTCTGTAAGAACATTTTAGTGCATTCTAATAGCCGGTTAATTGCAGATTTTACATTTTTTTTAGTACTAGCCAAAGCATGAAAGTGTGATGATTTCAAGTATATAAAAAAAAAATAGTTAAAATATAAATCTGAAAAGAAGGATTTATTTTTAGCACATCAGAAAATACTATTCTCAAATCAGGTGAACTCACTATCAAACTATTGGAGTATTGGTATTACATCATGGAGCTTCATAAGAAGAGAGAAGGGGGGGATGTCTAATTTTCCTGGATGTACTCGCGAGGAATAGCACGCACAAATAAACCACCATCAATATGAAGGGTTATCATTGTCCTGTAATTTACAGTACTTTCCTCATCACAGAGTTTGAAAGCAAAATTGCT

mRNA sequence

TCAGTTTCACACATCGCATTGGAGTTAAGAGTTGATCGCTTGAAAGTTGAAAGGCTTGAGAAGAAAGAGAGAGAAAAGATGGGAGGGAAAGCGAGGAAGAGGAGAGAGAAAAACTACCTAGCTGCTCATGGCGGCAACAAACTCCTCCCGCCGCCACCCAATACTTCTTCAATTGACGCTTTGCCCTCTAAACTTCGCAAACTCATGTCTCTTGTTTCCTCTCCCGCCCCTACCCGTCAAGGGTCTGCAATTGATTTGGGAAATACTCAAAGGAAGAGCAAGAAAGAGGACATCACTGAAAATAAACCTCTCCCAAAAATTAAGATGGACGGTAAAAGCAGGGGAATTGGAAGTACAAGAATGCCACAAGGAACAGTGATTACTGATGCAAATGACGAGAAAAAGAATAAGAAAAGAAAGAGAAAGCAGGCAAAGGACCTCCGGTTTGAAACGGAGCTGGAAAAGTTGGACGGCGTTTCAACAAGAAAGCAGCGGAAAAAAGAGTTTCTAAAAGCTAAGAAAAAGAAACAAAAGAAAAGCAGTTCAGAGCATAATCTTGACCTTCCGAAACATGATGAAGTCAAATTTGGAGAGGTTGCTGAAGCTCCACCAAAGTTGACAATTCCTGCATTCAAGAAACCTATGGATGCTTCACTTGAGAGGCGACGTTTGCTGGCTATTGAGGCCTATAGAAATCGTAAAGGGTGGACTAGTAGACCGGGAATTCATCTTCCTCCTGTGAGCTCATCATCCCCAGATTTTGTTTGATATCTGCTATACCGTGGCCACTCTTTTTTTTCTTTTTTTTGTGGTACTAAGACAAGACTGTGTTTACTGTCTGTAAGAACATTTTAGTGCATTCTAATAGCCGGTTAATTGCAGATTTTACATTTTTTTTAGTACTAGCCAAAGCATGAAAGTGTGATGATTTCAAGTATATAAAAAAAAAATAGTTAAAATATAAATCTGAAAAGAAGGATTTATTTTTAGCACATCAGAAAATACTATTCTCAAATCAGGTGAACTCACTATCAAACTATTGGAGTATTGGTATTACATCATGGAGCTTCATAAGAAGAGAGAAGGGGGGGATGTCTAATTTTCCTGGATGTACTCGCGAGGAATAGCACGCACAAATAAACCACCATCAATATGAAGGGTTATCATTGTCCTGTAATTTACAGTACTTTCCTCATCACAGAGTTTGAAAGCAAAATTGCT

Coding sequence (CDS)

ATGGGAGGGAAAGCGAGGAAGAGGAGAGAGAAAAACTACCTAGCTGCTCATGGCGGCAACAAACTCCTCCCGCCGCCACCCAATACTTCTTCAATTGACGCTTTGCCCTCTAAACTTCGCAAACTCATGTCTCTTGTTTCCTCTCCCGCCCCTACCCGTCAAGGGTCTGCAATTGATTTGGGAAATACTCAAAGGAAGAGCAAGAAAGAGGACATCACTGAAAATAAACCTCTCCCAAAAATTAAGATGGACGGTAAAAGCAGGGGAATTGGAAGTACAAGAATGCCACAAGGAACAGTGATTACTGATGCAAATGACGAGAAAAAGAATAAGAAAAGAAAGAGAAAGCAGGCAAAGGACCTCCGGTTTGAAACGGAGCTGGAAAAGTTGGACGGCGTTTCAACAAGAAAGCAGCGGAAAAAAGAGTTTCTAAAAGCTAAGAAAAAGAAACAAAAGAAAAGCAGTTCAGAGCATAATCTTGACCTTCCGAAACATGATGAAGTCAAATTTGGAGAGGTTGCTGAAGCTCCACCAAAGTTGACAATTCCTGCATTCAAGAAACCTATGGATGCTTCACTTGAGAGGCGACGTTTGCTGGCTATTGAGGCCTATAGAAATCGTAAAGGGTGGACTAGTAGACCGGGAATTCATCTTCCTCCTGTGAGCTCATCATCCCCAGATTTTGTTTGA

Protein sequence

MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDLGNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDANDEKKNKKRKRKQAKDLRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGEVAEAPPKLTIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00417.1	Spo00417.1	mRNA

Homology

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BLAST of Spo00417.1 vs. NCBI nr
Match: gi|902193098|gb|KNA12207.1| (hypothetical protein SOVF_127230 [Spinacia oleracea])

HSP 1 Score: 436.4 bits (1121), Expect = 3.000e-119
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL 60
           MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL
Sbjct: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL 60

Query: 61  GNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDANDEKKNKKRKRKQAKD 120
           GNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDANDEKKNKKRKRKQAKD
Sbjct: 61  GNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDANDEKKNKKRKRKQAKD 120

Query: 121 LRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGEVAEAPPKL 180
           LRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGEVAEAPPKL
Sbjct: 121 LRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGEVAEAPPKL 180

Query: 181 TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV 230
           TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV
Sbjct: 181 TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV 229

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BLAST of Spo00417.1 vs. NCBI nr
Match: gi|731361341|ref|XP_010692302.1| (PREDICTED: coiled-coil domain-containing protein 137 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 241.1 bits (614), Expect = 1.900e-60
Identity = 148/240 (61.67%), Postives = 172/240 (71.67%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTR--QGSAI 60
           M GK +KRREKNYLA+HGG   LPPPPN SSIDALPSKLR++M+  SS + T   Q S++
Sbjct: 1   MVGKGKKRREKNYLASHGGYNRLPPPPNASSIDALPSKLRQIMAFASSTSLTCTFQDSSM 60

Query: 61  DLGN---TQRKSKKEDITENKPLPKIKMDGKSRGIGSTRM-----PQGTVITDANDEKKN 120
           D  N   TQ+K  KED  +NKP  + +++ KS   G  R+     PQ  V  +AN+E   
Sbjct: 61  DSKNISTTQKKGNKEDTAKNKPHLESELNNKSSEAGEERVNKTTVPQEIVSKEANEETVK 120

Query: 121 KKRKRKQAKDLRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKF 180
           KKRK+KQA DLRFE ELEKL  VS RKQRKKEFLKAKKKK KK   E  LDLPK D VKF
Sbjct: 121 KKRKKKQANDLRFEAELEKLGVVSKRKQRKKEFLKAKKKKIKKGKPEEILDLPKQDVVKF 180

Query: 181 GEVAEAPPKLTI-PAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV 230
           GEV EAPPKL+  PA KK +DAS ER RL AIEAYR+RKGWT+RPG HLPPV S+SPD +
Sbjct: 181 GEVVEAPPKLSFNPAHKKTLDASRERLRLQAIEAYRSRKGWTNRPGSHLPPV-STSPDLL 239

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BLAST of Spo00417.1 vs. NCBI nr
Match: gi|296089095|emb|CBI38798.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 208.0 bits (528), Expect = 1.800e-50
Identity = 126/245 (51.43%), Postives = 165/245 (67.35%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTR-QGSAID 60
           MGGK R+RREKNY AAHGG++ LPPPP+ S +DALPSKLRKLM+  S   P R QGSA  
Sbjct: 1   MGGKGRRRREKNYRAAHGGHERLPPPPDLSKLDALPSKLRKLMAFTSPSTPQRPQGSAKA 60

Query: 61  LGNTQRKSKKEDITENKPLPKIKMDGKSRGIGST------------RMPQGTVITDANDE 120
             + ++K K+ D  E K  PK +++ K+  I +                 GTV +  + E
Sbjct: 61  SIDKEKKGKRGDAEEKKLHPKDELNYKTTKIDAAGDGDHFMTSQDMEDNDGTVPSSTH-E 120

Query: 121 KKNKKRKRKQAKDLRFETELEKLDGV-STRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHD 180
           K  +KRKRKQ KDLRFE ELEK+ G+ S R++RKK++L+++KKK KK+ +E NLD P+H+
Sbjct: 121 KGKRKRKRKQVKDLRFEAELEKVAGLGSKRRERKKKYLESRKKKHKKAKTEENLDFPRHE 180

Query: 181 EVKFGEVAEAPPKL-----TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPV 227
           ++KFGEV EAPPKL      + A K   DAS ER RL A++AYR RKGW SRPGIHLPP 
Sbjct: 181 KIKFGEVVEAPPKLVAVPKALKALKTVQDASQERLRLQAVDAYRKRKGWVSRPGIHLPPP 240

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BLAST of Spo00417.1 vs. NCBI nr
Match: gi|731421014|ref|XP_002275558.2| (PREDICTED: RNA polymerase-associated protein LEO1 [Vitis vinifera])

HSP 1 Score: 208.0 bits (528), Expect = 1.800e-50
Identity = 126/245 (51.43%), Postives = 165/245 (67.35%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTR-QGSAID 60
           MGGK R+RREKNY AAHGG++ LPPPP+ S +DALPSKLRKLM+  S   P R QGSA  
Sbjct: 9   MGGKGRRRREKNYRAAHGGHERLPPPPDLSKLDALPSKLRKLMAFTSPSTPQRPQGSAKA 68

Query: 61  LGNTQRKSKKEDITENKPLPKIKMDGKSRGIGST------------RMPQGTVITDANDE 120
             + ++K K+ D  E K  PK +++ K+  I +                 GTV +  + E
Sbjct: 69  SIDKEKKGKRGDAEEKKLHPKDELNYKTTKIDAAGDGDHFMTSQDMEDNDGTVPSSTH-E 128

Query: 121 KKNKKRKRKQAKDLRFETELEKLDGV-STRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHD 180
           K  +KRKRKQ KDLRFE ELEK+ G+ S R++RKK++L+++KKK KK+ +E NLD P+H+
Sbjct: 129 KGKRKRKRKQVKDLRFEAELEKVAGLGSKRRERKKKYLESRKKKHKKAKTEENLDFPRHE 188

Query: 181 EVKFGEVAEAPPKL-----TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPV 227
           ++KFGEV EAPPKL      + A K   DAS ER RL A++AYR RKGW SRPGIHLPP 
Sbjct: 189 KIKFGEVVEAPPKLVAVPKALKALKTVQDASQERLRLQAVDAYRKRKGWVSRPGIHLPPP 248

[Close]

BLAST of Spo00417.1 vs. NCBI nr
Match: gi|703085935|ref|XP_010092872.1| (hypothetical protein L484_022467 [Morus notabilis])

HSP 1 Score: 191.4 bits (485), Expect = 1.700e-45
Identity = 120/229 (52.40%), Postives = 153/229 (66.81%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL 60
           MGG+ RKRREKNY AAHGG   LPPPP++S +DALP KLR+++S  SS     QGSA + 
Sbjct: 1   MGGRGRKRREKNYRAAHGGYSRLPPPPDSSQVDALPFKLRQIISFTSS---LSQGSAKES 60

Query: 61  GNTQRKSKKED-ITENKPLPKIKMDGKSRGIGSTRM--PQGT-----VITDANDEKKNKK 120
            + ++K K ED  +E K  PK ++  +S GI    +  PQ T      + ++  EKK KK
Sbjct: 61  KDVEKKRKNEDGASELKSRPKDEIISESAGIRDVNLKTPQHTDDGDDTLKNSMSEKKKKK 120

Query: 121 RKRKQAKDLRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGE 180
           RKRKQ +DLRFE  LEK    S R++RKK++L+AKK K KK+ +E  LD P  +E+KFG+
Sbjct: 121 RKRKQVEDLRFEAALEKSGTSSKRRERKKKYLEAKKNKHKKAKTEDKLDFPGREEIKFGD 180

Query: 181 VAEAPPKL-TIP-AFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLP 220
           + +APPKL  IP A K   DAS  R RL AIE YR R+GWTSRPGIHLP
Sbjct: 181 IVQAPPKLAAIPKASKNTQDASKVRVRLQAIEDYRKRRGWTSRPGIHLP 226

[Close]

BLAST of Spo00417.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QY65_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127230 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.100e-119
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL 60
           MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL
Sbjct: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL 60

Query: 61  GNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDANDEKKNKKRKRKQAKD 120
           GNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDANDEKKNKKRKRKQAKD
Sbjct: 61  GNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDANDEKKNKKRKRKQAKD 120

Query: 121 LRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGEVAEAPPKL 180
           LRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGEVAEAPPKL
Sbjct: 121 LRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGEVAEAPPKL 180

Query: 181 TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV 230
           TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV
Sbjct: 181 TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV 229

[Close]

BLAST of Spo00417.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGN6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019630 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.300e-60
Identity = 148/240 (61.67%), Postives = 172/240 (71.67%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTR--QGSAI 60
           M GK +KRREKNYLA+HGG   LPPPPN SSIDALPSKLR++M+  SS + T   Q S++
Sbjct: 1   MVGKGKKRREKNYLASHGGYNRLPPPPNASSIDALPSKLRQIMAFASSTSLTCTFQDSSM 60

Query: 61  DLGN---TQRKSKKEDITENKPLPKIKMDGKSRGIGSTRM-----PQGTVITDANDEKKN 120
           D  N   TQ+K  KED  +NKP  + +++ KS   G  R+     PQ  V  +AN+E   
Sbjct: 61  DSKNISTTQKKGNKEDTAKNKPHLESELNNKSSEAGEERVNKTTVPQEIVSKEANEETVK 120

Query: 121 KKRKRKQAKDLRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKF 180
           KKRK+KQA DLRFE ELEKL  VS RKQRKKEFLKAKKKK KK   E  LDLPK D VKF
Sbjct: 121 KKRKKKQANDLRFEAELEKLGVVSKRKQRKKEFLKAKKKKIKKGKPEEILDLPKQDVVKF 180

Query: 181 GEVAEAPPKLTI-PAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPDFV 230
           GEV EAPPKL+  PA KK +DAS ER RL AIEAYR+RKGWT+RPG HLPPV S+SPD +
Sbjct: 181 GEVVEAPPKLSFNPAHKKTLDASRERLRLQAIEAYRSRKGWTNRPGSHLPPV-STSPDLL 239

[Close]

BLAST of Spo00417.1 vs. UniProtKB/TrEMBL
Match: D7U7L9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01660 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.200e-50
Identity = 126/245 (51.43%), Postives = 165/245 (67.35%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTR-QGSAID 60
           MGGK R+RREKNY AAHGG++ LPPPP+ S +DALPSKLRKLM+  S   P R QGSA  
Sbjct: 1   MGGKGRRRREKNYRAAHGGHERLPPPPDLSKLDALPSKLRKLMAFTSPSTPQRPQGSAKA 60

Query: 61  LGNTQRKSKKEDITENKPLPKIKMDGKSRGIGST------------RMPQGTVITDANDE 120
             + ++K K+ D  E K  PK +++ K+  I +                 GTV +  + E
Sbjct: 61  SIDKEKKGKRGDAEEKKLHPKDELNYKTTKIDAAGDGDHFMTSQDMEDNDGTVPSSTH-E 120

Query: 121 KKNKKRKRKQAKDLRFETELEKLDGV-STRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHD 180
           K  +KRKRKQ KDLRFE ELEK+ G+ S R++RKK++L+++KKK KK+ +E NLD P+H+
Sbjct: 121 KGKRKRKRKQVKDLRFEAELEKVAGLGSKRRERKKKYLESRKKKHKKAKTEENLDFPRHE 180

Query: 181 EVKFGEVAEAPPKL-----TIPAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPV 227
           ++KFGEV EAPPKL      + A K   DAS ER RL A++AYR RKGW SRPGIHLPP 
Sbjct: 181 KIKFGEVVEAPPKLVAVPKALKALKTVQDASQERLRLQAVDAYRKRKGWVSRPGIHLPPP 240

[Close]

BLAST of Spo00417.1 vs. UniProtKB/TrEMBL
Match: W9R002_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022467 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.200e-45
Identity = 120/229 (52.40%), Postives = 153/229 (66.81%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL 60
           MGG+ RKRREKNY AAHGG   LPPPP++S +DALP KLR+++S  SS     QGSA + 
Sbjct: 1   MGGRGRKRREKNYRAAHGGYSRLPPPPDSSQVDALPFKLRQIISFTSS---LSQGSAKES 60

Query: 61  GNTQRKSKKED-ITENKPLPKIKMDGKSRGIGSTRM--PQGT-----VITDANDEKKNKK 120
            + ++K K ED  +E K  PK ++  +S GI    +  PQ T      + ++  EKK KK
Sbjct: 61  KDVEKKRKNEDGASELKSRPKDEIISESAGIRDVNLKTPQHTDDGDDTLKNSMSEKKKKK 120

Query: 121 RKRKQAKDLRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGE 180
           RKRKQ +DLRFE  LEK    S R++RKK++L+AKK K KK+ +E  LD P  +E+KFG+
Sbjct: 121 RKRKQVEDLRFEAALEKSGTSSKRRERKKKYLEAKKNKHKKAKTEDKLDFPGREEIKFGD 180

Query: 181 VAEAPPKL-TIP-AFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLP 220
           + +APPKL  IP A K   DAS  R RL AIE YR R+GWTSRPGIHLP
Sbjct: 181 IVQAPPKLAAIPKASKNTQDASKVRVRLQAIEDYRKRRGWTSRPGIHLP 226

[Close]

BLAST of Spo00417.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KEN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076790 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.800e-44
Identity = 117/235 (49.79%), Postives = 150/235 (63.83%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL 60
           MGGK  +RRE+NY AAHGG   LPPPP+TS  D LPSKLRKLMS  SS +   +  + D+
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQPDTLPSKLRKLMSFTSSRSQEPEKVSEDI 60

Query: 61  GNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDAND------EKKNKKRK 120
              QRK K+E +  +K   +    G     G+++MPQ     D N+      EKKNKKRK
Sbjct: 61  ---QRKRKREAVNTDKKSNQKDASGSKANGGNSQMPQRMGSDDDNNVHSKSSEKKNKKRK 120

Query: 121 RKQAKDLRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNLDLPKHDEVKFGEVA 180
           RKQ  DLRFE  LE+      +++R K++ +AKK K KK+ +E  LD PKH+++KFG+V 
Sbjct: 121 RKQVTDLRFEDSLEESSRRLKKRERWKKYQEAKKNKHKKAKTEEYLDFPKHEKIKFGDVV 180

Query: 181 EAPPK-LTIP-AFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPVSSSSPD 228
           EAP K L +P AFK    AS ER+RL AI  YRNRKGWTSRPGI +P ++ S  D
Sbjct: 181 EAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTISPAD 232

[Close]

BLAST of Spo00417.1 vs. TAIR (Arabidopsis)
Match: AT2G45520.1 (unknown protein)

HSP 1 Score: 161.4 bits (407), Expect = 6.700e-40
Identity = 104/225 (46.22%), Postives = 139/225 (61.78%), Query Frame = 1


		  
Query: 1   MGGKARKRREKNYLAAHGGNKLLPPPPNTSSIDALPSKLRKLMSLVSSPAPTRQGSAIDL 60
           MGGK +KRREKNYLAAHGG   LPPPP+ S  D +PS LR LM+  S   P+   S   +
Sbjct: 1   MGGKGKKRREKNYLAAHGGPARLPPPPDRSKQDDVPSTLRILMNYTS---PSPHDSTKQV 60

Query: 61  GNTQRKSKKEDITENKPLPKIKMDGKSRGIGSTRMPQGTVITDANDEKKNKKRKRKQAKD 120
              + K KK ++     +P  + DG                 D+  EKK KKRKR Q  D
Sbjct: 61  VEKKEKLKKAEVV----VPATESDGD----------------DSVVEKKKKKRKRNQMTD 120

Query: 121 LRFETELEKLDGVSTRKQRKKEFLKAKKKKQKKSSSEHNL--DLPKHDEVKFGEVAEAPP 180
           LRFE EL ++DG S RK+RKK++ +AKK+K+ K  +E  L  + PKH++++FG+V +AP 
Sbjct: 121 LRFENELAEIDGRSKRKERKKKYWEAKKQKKNKGKTEDTLRENFPKHEQIRFGDVVQAPL 180

Query: 181 KLTI--PAFKKPMDASLERRRLLAIEAYRNRKGWTSRPGIHLPPV 222
           KL +   A K  + AS ER RL AI+AYR+RKGWT+RPG+ +P V
Sbjct: 181 KLAVVPKARKSTLSASQERLRLQAIDAYRSRKGWTARPGVPIPAV 202

The following BLAST results are available for this feature:

BLAST of Spo00417.1 vs. NCBI nr
BLAST of Spo00417.1 vs. UniProtKB/TrEMBL
BLAST of Spo00417.1 vs. ExPASy Swiss-Prot
BLAST of Spo00417.1 vs. TAIR (Arabidopsis)

BLAST of Spo00417.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902193098\|gb\|KNA12207.1\|	3.0e-119	100.	hypothetical protein SOVF_1272...	[more]
gi\|731361341\|ref\|XP_010692302.1\|	1.9e-60	61.6	PREDICTED: coiled-coil domain-...	[more]
gi\|296089095\|emb\|CBI38798.3\|	1.8e-50	51.4	unnamed protein product [Vitis...	[more]
gi\|731421014\|ref\|XP_002275558.2\|	1.8e-50	51.4	PREDICTED: RNA polymerase-asso...	[more]
gi\|703085935\|ref\|XP_010092872.1\|	1.7e-45	52.4	hypothetical protein L484_0224...	[more]

BLAST of Spo00417.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QY65_SPIOL	2.1e-119	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BGN6_BETVU	1.3e-60	61.6	Uncharacterized protein OS=Bet...	[more]
D7U7L9_VITVI	1.2e-50	51.4	Putative uncharacterized prote...	[more]
W9R002_9ROSA	1.2e-45	52.4	Uncharacterized protein OS=Mor...	[more]
A0A0A0KEN1_CUCSA	3.8e-44	49.7	Uncharacterized protein OS=Cuc...	[more]

BLAST of Spo00417.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo00417.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G45520.1	6.7e-40	46.2	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 101..124 scor
None	No IPR available	PANTHER	PTHR37218	FAMILY NOT NAMED	coord: 2..228 score: 8.1
None	No IPR available	PANTHER	PTHR37218:SF1	EXPRESSED PROTEIN	coord: 2..228 score: 8.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031048	chromatin silencing by small RNA
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0009117	nucleotide metabolic process
biological_process	GO:0010289	homogalacturonan biosynthetic process
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0071702	organic substance transport
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0009630	gravitropism
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005768	endosome
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005802	trans-Golgi network
molecular_function	GO:0005488	binding
molecular_function	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08968	0.77	Barchart \| Table
Spo10935	0.72	Barchart \| Table
Spo03077	0.71	Barchart \| Table
Spo22458	0.71	Barchart \| Table
Spo05897	0.71	Barchart \| Table
Spo03846	0.70	Barchart \| Table
Spo25422	0.70	Barchart \| Table
Spo05076	0.69	Barchart \| Table
Spo09882	0.69	Barchart \| Table
Spo00391	0.69	Barchart \| Table
Spo04262	0.69	Barchart \| Table
Spo17547	0.68	Barchart \| Table
Spo14468	0.68	Barchart \| Table
Spo20924	0.68	Barchart \| Table
Spo06383	0.68	Barchart \| Table
Spo01200	0.67	Barchart \| Table
Spo00579	0.67	Barchart \| Table
Spo01507	0.67	Barchart \| Table
Spo01615	0.67	Barchart \| Table
Spo07694	0.67	Barchart \| Table
Spo11993	0.67	Barchart \| Table
Spo12921	0.67	Barchart \| Table
Spo14364	0.67	Barchart \| Table
Spo16973	0.67	Barchart \| Table
Spo22471	0.67	Barchart \| Table
Spo24990	0.67	Barchart \| Table
Spo26381	0.67	Barchart \| Table
Spo15003	0.66	Barchart \| Table
Spo17235	0.66	Barchart \| Table
Spo04279	0.66	Barchart \| Table
Spo00137	0.66	Barchart \| Table
Spo00407	0.66	Barchart \| Table
Spo22869	0.66	Barchart \| Table
Spo13514	0.66	Barchart \| Table
Spo01146	0.65	Barchart \| Table
Spo04587	0.65	Barchart \| Table
Spo04898	0.65	Barchart \| Table
Spo15482	0.65	Barchart \| Table
Spo25072	0.65	Barchart \| Table
Spo11779	0.65	Barchart \| Table
Spo27217	0.65	Barchart \| Table
Spo18179	0.65	Barchart \| Table
Spo23355	0.65	Barchart \| Table