Spo00400 (gene) | SpinachBase

Overview


Name	Spo00400
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	CRS2-associated factor 1
Location	chr2 : 48805911 .. 48811413 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTTTAAAGAAATGATGATCGTGGTCTCAAACGGAAAAAAAAAAATAGAAAAAAGAAAAAGAAATAACCCATGTTCATCTTTCTCATTCCCCGCCAAAACCTCCGCCACCGTATTTGTCTCTCCTCCGTTCGCCGCCACCTTTCAACCACCTCCTCCAAACTCCTCACCAAATACTCCTTCACTCCTCCTCCCTCTCTCCCACCTCAAAACCAAAACCAAAACCCTAACCCTAACCCTAAACCATCCTCTCAAAACCTCCAATCTCCAAACAAAATCCGCAAAAAGCCTCTATACCGCCCTCCCTCAACCCTAGAAACCGGCGAGAAGCCATTGAGATCAAATCTACCCTTCGATTTCCGGTACAGTTACACTGAAAGTAACCCCTCAGTAAGGCCCATTGGGCTCCGGGGTCCTAAATACTCCCCATTTGGTCCGGGCCGGGTTAAACGAGAATGGACCGGGGTTTGCGCTCCGGTGAAGAGCCCGAAAGTGAGGTCTGTAGATGGGGAAGTGGAGGATGATTCCGAGTTGGTGGAGAAGAGGAGGTTGATGAGAGAGACACTTCTTGGGCAGCCATTGACTGATGCTGAGAAGAAGATTCTTGTTGATATGTGTGAGAGGAGTAAAGTTAAGAAACAAGTTAACCTGGGTAATTGGAGTGTTTTTTTTGTGTTTTTTGGTATCTGAATTTGTGGATGGTTATTTTTTGGCACTAAAAGTGTTTGATGAAATGCCTAGCTGAATTTTGATGTTCTTTTCGCCTTTTTCTGTCAAATTCATTTTTTGGTCCTTTGTATTGGAATATCTGGATAAATTCTGGATAGTTTGATCGTAGACTTATATTTTCTTCTGAATGTTTGCATTTTCGTTTTCAAATTTTATAGCCATGTTTGGTTTTGATGAATTCCCGGAAATTGTTTGGGATGTGAGGTGTTTTGATGATTTTTTTGTAATGTTTGTGTTCAAAAGATTGATGTTTTTAAAAAAATAAATTGGATTTTCTGGATGAGGATACCATGCTTAATTAGTCTAACTACCCTAATATCTAATACACATATGTACTCATACCTTTGAACTAATGATTGGTTAGTCATAGATTTTATAAAGCTAGAAACTCCAAATCAAATGGTGTACACTACTGAGATTGTTGTGTTGTCTTTTAGGGAGAGACGGTCTGACTCACAATATGTTGAATGATATTCACAATCACTGGAAGGATGCTGAGGCAATCAGGATTAAGTGCATGGGTGTGCCAACTATTGACATGGAGAATGTCTTAACCCAGCTTGAGGTTTGTTTTCTACTTCGTATTATACGAGTTACAACCACAGGTATCAACTATGGAGTATCGTTGTTGTAAATTTGTACTAATGTGTGGGTTTAGAATGACTTCTTGGATGGATTATGAAACATCATTCAATTTGTAAGACTGAAACACAAGGCAAAAAATGATGCAAGAGTTTTCAGTTTTGAGAATCCAAAAATAGTAAATACTACGTAAGAGTTTACACAATTAGCTTTAAATCAAATCTGTATAGACTTCTCCTGTTAATTTTGGAAACTGACAACTGAGAAGTGAGAACTAGGATCTAGTTATTCTGGTTTTGAATGACCTCAGTTAAACTGAACTGACAGCACTATCATTGAGAGCCATAATCAGATGATAAATTTCTTCTGAAAATGGCCAAAGTTAAAAGATTTTAAGTCAAAGAGATCTCTGAATTTCCCTCTACAGCCTCTGATTTTTTTTTTTCCCATTTTGTGTCTTGTTAAGAGAGAGGTCCTATGCAGTTCGGTGAAACATATGTGAAAAAGAATTTGGGGCTGTAGTGTTGGTGCTTCCCCACCCCCCCCCTTCCATCCTTGGTAACGAGGGTTGAAAGACTTCACGTATGTTTTCTTCTCGTTCCCTTTTTACTTTTCTCCTTTGTTTCTCACTTTCTATCCTGTCATACGAATACAATAATGTTATGCATGCTTTTAACCCTTGTTGCTGAGGGTGTAAGAAGCTGTGCGTGTAGCTTATAGTATATAGTTTGTTCATTGTAGGATAAGACATTTGGCAAGATCATCCACAGGCAAAGTGGTCTTCTTGTTCTGTACAGAGGTAGGAACTATAAATCCAAGAAGAGGCCTGTGATTCCATTAATGCTTTGGAAACCCCAAGAGCCTGTGTATCCAAAGCTAATTAAAACTACAGTTGAGGGATTAAGCATTGAAGAGACAAAGGTATTGAGAAAAAGAGGATTAGCTGTTCCTGCATTGACTAAACTCGGTAATTTTCTATTCTGATGAATTCGTTATGGTTTTTTTTTTTCTTTTCATTTTTACGACTGTTCTAATTCTTGCTATGGAAAATGCAGGTAGAAATGGATACTATGGTAACCTTGTAACTATGATCCGAGATGCTTTTCTCGTGGAAGAGCTGGTCCGGGTAGACTGCACTGGTCTTGACAAGAGTGATCACAAGAAAATAGCCGTAAAACTTAGGGTAATTTCTCTTTTCTTTGTCGTGTTTTTATTTGTGCTTAGCAAATTTTGCATATCTTCTGGCTAATGCGATGGAGCTAAGGGGGCATTTGGTTCGCAGAGGGTAAAGGGAATGGAATCAACAAAGGGAAAGAAAGGGAATGAGAATGATTCCCTTTGATTTAGAATATTGTTTGGGGAACACAAAGAGAATGAGGAGAAGAAAGTAGAGGAGAACCCATCGCCGGAGAAGAAGCCGGTGAAACCAAAGAAACCCATCGCCGGAGAAACCAAAGAAACCCATCCCCGCCTCTTCTCCCTCGTGGACCTAGCCGTCGCCTCTTCTCCTTCGCAGCCGCCGCCTCTTCTCCTTCGCAGCCGCCGCCTTTCCCACTCCTTTTCGCACATTCTAATTGGCAAATTTGTGGTTTTAATGGTCAAATTCGACCATGAAAACACCAGATCTGGTGTTTTTATGGTCGAATTTGACTATTTAAAGCCATGATTAAGAGGTTGCTTGAGCGGCGATGGTGAAACTCGGCGGCGACGGAGCGGTGAACTCGAACAGCGACGGAGGCGGTGAAGCTTGAGTGGCGACGGAGCTTCCGAAGGGGGTGAAGGTTGAGCGCCGATGGAGGTGGTGGTTGAGCGCCGACGGAGATGGTGGTTGAGCGACGACGAAGGTGTGTTCAAGATAGGGTCAGAGGAGGGAGAGAGGGTGTGGGGAAGGGAAGGGGGAAGGGAAGGGGGGAATGGAATGGGAAAGTGTGGGGGGGGGGTGGGGAATGAGTGTAGAAGGTTTTAGGGTGAACTCAATAATGAAAAAGGTAAAGGGAATGAAGAAATAGTCATAACAAACAACAACATAGGGAATGATATCCTCTCATTCCCATTCCCTTTGATTATTACCCCCAACCAAACGCCCCCTAATGGTTACTTTGACAACATCGACGCTTAATCTTTATCCCACTTATATGACAACATTGAATCTCACGATGGGCAAGGAAATGCTGATTTTTGTTTTACTTAAAAAGTAAAAGCATAGTTGGGCACAGGGAAAGAGAAAGATCAGCTTAGGATGCTGATAGATCAGCATTGCAGTTCATATTTTGCAGTAAAGAAACTAGATGGTTGTAGCTAGGGTTTGGCATCCCTAGCATTTGTTTACTTACACCGATTAGCATCATTTTGATATCTCTCCTTGGATCTATCAGAAACAACCCACGTAAACGTTAATATAGTTTCTCCGTGACAATCCCTCAAAAAAAAAAGTTTCTCCGTGACAACCTTTCTGTAATCTTTGTTATCTCTTATAGAATGGTTGTCCAAGCTAAGTTAGCTAACCTTTTCTTTCTTTGACATTCTTTTATCAAAGATCTGCTGTCATTCCTTTCTGTGAAGCTTAGTGAATATAGCTTCTTACCTTTAATATTTCCAAGAACTGATTAACATTTCCAATATTAATCTTGTCTTTACTTTAAACATATTTTTTGTAATGCACATGAATGGCCTGAATTTTACAATTTGATCTTTAGTTCCTCTGCACTTCAAATTATGAGCATTAGCATTGTACATTTATACACCTACAAGTTATGGCGTCCCACACCATATCACTTTATATCAATATCCTGTAGTGCATCTTACCAAGATGTCCGTCTACAAATTGTCACCTGTAAGGGCGGCTGTAAAATACTGACTAGAAGTAGCTCAGGGGGACTACTAGATTTGAACACTGGTATTTTTCATTTTGCTGCTACACCTCATACAGCTTCCTCTAGAAATATTTTGTGTGTAAATTGTCATCTCGCTCGACGCTTTCACCAAATACAACACTTCGTGAACATGGCTAACAATCTCGCTGTTGTTGGCTTGGCTGTTTCTAAATTTGAATTTTTTTGTGGAATTAGATTTTTTGTAGTTATGTTTCTTGAACTGTAAAGTAGTATATAACCAATTAATTAACCTTATTCCTGTAAGATGCATATGGTTGTCTGCTGCTGTTAATACAATATTTTATCTACTTAACAATGGTGTATTGGGTTCCTCTGAATCTCTGGTTGTTTGTCACCAAATTTTTATCAGGACTTGGTGCCATGTATCCCTGTTACGCTTATGAAGGAACAGATTGTAGTGTGGAGAGGACCGCACCATGAACCTGCGGGGAATGGAACTTTTCTTTCAGCACGGGATTCTGTCGAGAATTCCATTGACAACTTGGTTTGGGATTCTTGACGACACGAGCTTGAATACGGAGTTGCTACAAGTTCAAGGGAGATCTGGGAGCAGTTTAGTATTTGCTTAATGTCACAGAAGCTCTGGTGACGCAGAAGAATTTACAGTACATGGGTTAATGAAATCAACTTCAATAAAAGCATGTGGCTTTATGCCTTTATTCAGATCTGATGTCAGGATAGTCTGCTGGATCTGTTTGCTTATTACTCTAATCTTGAATGAAAAATGAGGTGGGTTTTCGACCTTTTTAAAAGTTCCAGCAGCCTGGTATGTACCTTATAACAAAATAAAATAAAAATCTTTGATTTACTTCGAGCATGTTCATTCATTATTTGCTAGTCGGGTTAAAGTTGCCATCCTTTTTTAGCATGGTTTCATGTTCGGATCTTCAGAATTCTTTCATATCAATCTTCTCGAAGGACGACACTTGTGGAAGAAGAATATGAATCAGGAATTGGAAATTGCTGATTTGAAAGGAACTTCGATGCAATGTTGTGGGATATGACTCGTTTTTATAGTTTCTGCAATTTTGTTAACTTTGTAAATTATGCCATGTGTTTAGTTTTTCTTTTAGTTGTACTCCATTGTTTGACTTGTTGTGAATATTGTATGTAATTGTTGCCGATTTGGTCAAAGAAGTGGAGTAGTTGGATGCGGCATGCCATGTGTATTATTTGAATCTTTTTCAGGTAATATATTGCTTTACCAATTCACAAATACTTTTTCCTTAGTCTTATTTTATCCTAGTCTGAGCAATCAAACCTCATAGATTTTTTTGCCGATTTTAGCTTATTTACCGA

mRNA sequence

AACTTTAAAGAAATGATGATCGTGGTCTCAAACGGAAAAAAAAAAATAGAAAAAAGAAAAAGAAATAACCCATGTTCATCTTTCTCATTCCCCGCCAAAACCTCCGCCACCGTATTTGTCTCTCCTCCGTTCGCCGCCACCTTTCAACCACCTCCTCCAAACTCCTCACCAAATACTCCTTCACTCCTCCTCCCTCTCTCCCACCTCAAAACCAAAACCAAAACCCTAACCCTAACCCTAAACCATCCTCTCAAAACCTCCAATCTCCAAACAAAATCCGCAAAAAGCCTCTATACCGCCCTCCCTCAACCCTAGAAACCGGCGAGAAGCCATTGAGATCAAATCTACCCTTCGATTTCCGGTACAGTTACACTGAAAGTAACCCCTCAGTAAGGCCCATTGGGCTCCGGGGTCCTAAATACTCCCCATTTGGTCCGGGCCGGGTTAAACGAGAATGGACCGGGGTTTGCGCTCCGGTGAAGAGCCCGAAAGTGAGGTCTGTAGATGGGGAAGTGGAGGATGATTCCGAGTTGGTGGAGAAGAGGAGGTTGATGAGAGAGACACTTCTTGGGCAGCCATTGACTGATGCTGAGAAGAAGATTCTTGTTGATATGTGTGAGAGGAGTAAAGTTAAGAAACAAGTTAACCTGGGGAGAGACGGTCTGACTCACAATATGTTGAATGATATTCACAATCACTGGAAGGATGCTGAGGCAATCAGGATTAAGTGCATGGGTGTGCCAACTATTGACATGGAGAATGTCTTAACCCAGCTTGAGGATAAGACATTTGGCAAGATCATCCACAGGCAAAGTGGTCTTCTTGTTCTGTACAGAGGTAGGAACTATAAATCCAAGAAGAGGCCTGTGATTCCATTAATGCTTTGGAAACCCCAAGAGCCTGTGTATCCAAAGCTAATTAAAACTACAGTTGAGGGATTAAGCATTGAAGAGACAAAGGTATTGAGAAAAAGAGGATTAGCTGTTCCTGCATTGACTAAACTCGGTAGAAATGGATACTATGGTAACCTTGTAACTATGATCCGAGATGCTTTTCTCGTGGAAGAGCTGGTCCGGGTAGACTGCACTGGTCTTGACAAGAGTGATCACAAGAAAATAGCCGTAAAACTTAGGGACTTGGTGCCATGTATCCCTGTTACGCTTATGAAGGAACAGATTGTAGTGTGGAGAGGACCGCACCATGAACCTGCGGGGAATGGAACTTTTCTTTCAGCACGGGATTCTGTCGAGAATTCCATTGACAACTTGGTTTGGGATTCTTGACGACACGAGCTTGAATACGGAGTTGCTACAAGTTCAAGGGAGATCTGGGAGCAGTTTAGTATTTGCTTAATGTCACAGAAGCTCTGGTGACGCAGAAGAATTTACAGTACATGGGTTAATGAAATCAACTTCAATAAAAGCATGTGGCTTTATGCCTTTATTCAGATCTGATGTCAGGATAGTCTGCTGGATCTGTTTGCTTATTACTCTAATCTTGAATGAAAAATGAGAATTCTTTCATATCAATCTTCTCGAAGGACGACACTTGTGGAAGAAGAATATGAATCAGGAATTGGAAATTGCTGATTTGAAAGGAACTTCGATGCAATGTTGTGGGATATGACTCGTTTTTATAGTTTCTGCAATTTTGTTAACTTTGTAAATTATGCCATGTGTTTAGTTTTTCTTTTAGTTGTACTCCATTGTTTGACTTGTTGTGAATATTGTATGTAATTGTTGCCGATTTGGTCAAAGAAGTGGAGTAGTTGGATGCGGCATGCCATGTGTATTATTTGAATCTTTTTCAGGTAATATATTGCTTTACCAATTCACAAATACTTTTTCCTTAGTCTTATTTTATCCTAGTCTGAGCAATCAAACCTCATAGATTTTTTTGCCGATTTTAGCTTATTTACCGA

Coding sequence (CDS)

ATGTTCATCTTTCTCATTCCCCGCCAAAACCTCCGCCACCGTATTTGTCTCTCCTCCGTTCGCCGCCACCTTTCAACCACCTCCTCCAAACTCCTCACCAAATACTCCTTCACTCCTCCTCCCTCTCTCCCACCTCAAAACCAAAACCAAAACCCTAACCCTAACCCTAAACCATCCTCTCAAAACCTCCAATCTCCAAACAAAATCCGCAAAAAGCCTCTATACCGCCCTCCCTCAACCCTAGAAACCGGCGAGAAGCCATTGAGATCAAATCTACCCTTCGATTTCCGGTACAGTTACACTGAAAGTAACCCCTCAGTAAGGCCCATTGGGCTCCGGGGTCCTAAATACTCCCCATTTGGTCCGGGCCGGGTTAAACGAGAATGGACCGGGGTTTGCGCTCCGGTGAAGAGCCCGAAAGTGAGGTCTGTAGATGGGGAAGTGGAGGATGATTCCGAGTTGGTGGAGAAGAGGAGGTTGATGAGAGAGACACTTCTTGGGCAGCCATTGACTGATGCTGAGAAGAAGATTCTTGTTGATATGTGTGAGAGGAGTAAAGTTAAGAAACAAGTTAACCTGGGGAGAGACGGTCTGACTCACAATATGTTGAATGATATTCACAATCACTGGAAGGATGCTGAGGCAATCAGGATTAAGTGCATGGGTGTGCCAACTATTGACATGGAGAATGTCTTAACCCAGCTTGAGGATAAGACATTTGGCAAGATCATCCACAGGCAAAGTGGTCTTCTTGTTCTGTACAGAGGTAGGAACTATAAATCCAAGAAGAGGCCTGTGATTCCATTAATGCTTTGGAAACCCCAAGAGCCTGTGTATCCAAAGCTAATTAAAACTACAGTTGAGGGATTAAGCATTGAAGAGACAAAGGTATTGAGAAAAAGAGGATTAGCTGTTCCTGCATTGACTAAACTCGGTAGAAATGGATACTATGGTAACCTTGTAACTATGATCCGAGATGCTTTTCTCGTGGAAGAGCTGGTCCGGGTAGACTGCACTGGTCTTGACAAGAGTGATCACAAGAAAATAGCCGTAAAACTTAGGGACTTGGTGCCATGTATCCCTGTTACGCTTATGAAGGAACAGATTGTAGTGTGGAGAGGACCGCACCATGAACCTGCGGGGAATGGAACTTTTCTTTCAGCACGGGATTCTGTCGAGAATTCCATTGACAACTTGGTTTGGGATTCTTGA

Protein sequence

MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSSQNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPFGPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVDMCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00400.1	Spo00400.1	mRNA

Homology

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BLAST of Spo00400.1 vs. NCBI nr
Match: gi|902206435|gb|KNA15468.1| (hypothetical protein SOVF_098070 [Spinacia oleracea])

HSP 1 Score: 812.4 bits (2097), Expect = 3.600e-232
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 1

		  
Query: 1   MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSS 60
           MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSS
Sbjct: 1   MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSS 60

Query: 61  QNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPF 120
           QNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPF
Sbjct: 61  QNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPF 120

Query: 121 GPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVD 180
           GPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVD
Sbjct: 121 GPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVD 180

Query: 181 MCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTF 240
           MCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTF
Sbjct: 181 MCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTF 240

Query: 241 GKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRK 300
           GKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRK
Sbjct: 241 GKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRK 300

Query: 301 RGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCI 360
           RGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCI
Sbjct: 301 RGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCI 360

Query: 361 PVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS 404
           PVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS
Sbjct: 361 PVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS 403

[Close]

BLAST of Spo00400.1 vs. NCBI nr
Match: gi|731361392|ref|XP_010692330.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 616.3 bits (1588), Expect = 3.800e-173
Identity = 313/410 (76.34%), Postives = 345/410 (84.15%), Query Frame = 1

		  
Query: 1   MFIFLIPRQNLRHRICLSSVR----RHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNP 60
           MFI +I R+N  +   LSS+     RHLST+SSKL TKYSFT PPSL PQN    P+ NP
Sbjct: 1   MFISIIHRKNFHNHHSLSSLLLLHYRHLSTSSSKLHTKYSFTSPPSLHPQNSLSKPSQNP 60

Query: 61  KPSSQNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPK 120
                  QS   I +KP YRPPS+LETG+KPLRSNLPFDFRYSYTESNPSVRPIGLR PK
Sbjct: 61  -------QSQTLISEKPPYRPPSSLETGQKPLRSNLPFDFRYSYTESNPSVRPIGLREPK 120

Query: 121 YSPFGPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSE---LVEKRRLMRETLLGQPLTDA 180
           YSPFGPGRV REWTGVCAPVKSPKVRSVDG+V+DD +   L EK+RLMRE +LG  LTDA
Sbjct: 121 YSPFGPGRVAREWTGVCAPVKSPKVRSVDGKVDDDDDDPKLEEKKRLMREKVLGDALTDA 180

Query: 181 EKKILVDMCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLT 240
           E KILVD C+R K K+Q+NLGRDGLTHNMLNDIHNHWK  EAIRIKCMGVPTIDM+NV T
Sbjct: 181 EIKILVDKCQRGKTKRQINLGRDGLTHNMLNDIHNHWKHTEAIRIKCMGVPTIDMKNVFT 240

Query: 241 QLEDKTFGKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIE 300
           QLEDKTFGKIIHR  GLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPK+IKTT+EGLSIE
Sbjct: 241 QLEDKTFGKIIHRHGGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKMIKTTIEGLSIE 300

Query: 301 ETKVLRKRGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKL 360
           ETKVLRKRG+AVPALTKL RNGYYGNLV M+RDAFLVEELVR+DCTGLDKSD KKI VKL
Sbjct: 301 ETKVLRKRGIAVPALTKLVRNGYYGNLVAMVRDAFLVEELVRIDCTGLDKSDLKKIGVKL 360

Query: 361 RDLVPCIPVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS 404
           RDLVPCIPVT +KEQIVVWRGP++E   +G F + R+  E ++D+LVWDS
Sbjct: 361 RDLVPCIPVTFVKEQIVVWRGPNYELVEDGLFRTEREPFEKTVDDLVWDS 403

[Close]

BLAST of Spo00400.1 vs. NCBI nr
Match: gi|698491505|ref|XP_009792167.1| (PREDICTED: CRS2-associated factor 1, mitochondrial isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 522.7 bits (1345), Expect = 5.700e-145
Identity = 260/392 (66.33%), Postives = 308/392 (78.57%), Query Frame = 1

		  
Query: 5   LIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSSQNLQ 64
           ++P    RH    ++     +T SS L +KYSF PPPSL PQ        NP  +  + Q
Sbjct: 12  ILPLSVTRHLFSTAAPAATTTTASSNLYSKYSFVPPPSLKPQ--------NPNSTQPHSQ 71

Query: 65  SPNKIRKKPLYRPPSTLE-TGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPFGPG 124
           SP+K + KP YRPPS+L+ TGEKP++S LPFDFR+SYTES+  VRPIGLR PKYSPFGPG
Sbjct: 72  SPSKKQPKPRYRPPSSLDRTGEKPVQSRLPFDFRFSYTESSTEVRPIGLREPKYSPFGPG 131

Query: 125 RVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVDMCE 184
           ++ R WTGVCAPV  PKV    G  ED+  + EKRR+MRE + G+PLT+AE+K L + C+
Sbjct: 132 KLDRVWTGVCAPVVDPKV----GSAEDEKTVEEKRRVMRERIQGEPLTNAERKALAETCQ 191

Query: 185 RSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKI 244
           R K K+QVNLGRDGLTHNMLNDIHN+WK AEA+RIKCMGVPT+DM+NV TQLEDKTFGKI
Sbjct: 192 RHKTKRQVNLGRDGLTHNMLNDIHNNWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTFGKI 251

Query: 245 IHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGL 304
           IHR  GLLVLYRGRNY  KKRPVIPLMLWKP EPVYP+LIKTT++GLSIEETK +RK GL
Sbjct: 252 IHRHGGLLVLYRGRNYHPKKRPVIPLMLWKPHEPVYPRLIKTTIDGLSIEETKEMRKNGL 311

Query: 305 AVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVT 364
           AVPALTKL +NGYYG+LV M+RDAFL EELVR+DC GL KSD+KKI  KLRDLVPCI VT
Sbjct: 312 AVPALTKLAKNGYYGSLVPMVRDAFLTEELVRMDCKGLPKSDYKKIGCKLRDLVPCILVT 371

Query: 365 LMKEQIVVWRGPHHEPAGNGTFLSARDSVENS 396
             KEQIVVWRG ++EP+ NG FL+ R+  ++S
Sbjct: 372 FDKEQIVVWRGKNYEPSANGFFLTEREPFDDS 391

[Close]

BLAST of Spo00400.1 vs. NCBI nr
Match: gi|645254005|ref|XP_008232837.1| (PREDICTED: CRS2-associated factor 1, mitochondrial isoform X1 [Prunus mume])

HSP 1 Score: 520.0 bits (1338), Expect = 3.700e-144
Identity = 263/399 (65.91%), Postives = 312/399 (78.20%), Query Frame = 1

		  
Query: 3   IFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSSQN 62
           +FL     L     L  + RHLS  S KL  +YSF PPPSL P  Q QNPN N       
Sbjct: 1   MFLTKLSRLNPNPLLLILTRHLSNPS-KLHDRYSFKPPPSLSPNTQGQNPNHN------- 60

Query: 63  LQSPNKIRKKPLYRPPSTLE-TGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPFG 122
             +P K ++KP YRPPS+L+ TG+KP+ S+LPFDFRYSYTES+P+VRPIGLR PKYSPFG
Sbjct: 61  --NPKK-KQKPQYRPPSSLDRTGQKPIHSDLPFDFRYSYTESSPTVRPIGLREPKYSPFG 120

Query: 123 PGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVDM 182
           PGR+ REW GVCAP   PKVRSV G  E+D +L EKR+  R+ + G+PLT AE+KILVD 
Sbjct: 121 PGRIDREWIGVCAPAVDPKVRSVQG-AEEDPKLEEKRKRRRQKVQGEPLTPAERKILVDK 180

Query: 183 CERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFG 242
           C+R K K+Q+NLGRDGLTHNMLNDI NHWK  EA+RIKC+GVPT+DM+NV TQLEDKTFG
Sbjct: 181 CQRPKTKRQINLGRDGLTHNMLNDIQNHWKHDEAVRIKCLGVPTVDMKNVCTQLEDKTFG 240

Query: 243 KIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKR 302
           KIIHR  G+LVLYRGRNYK KKRPVIPLMLW+P EP+YP+LIKTT++GLSIEETK +RKR
Sbjct: 241 KIIHRHGGVLVLYRGRNYKPKKRPVIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKR 300

Query: 303 GLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIP 362
           GLAVPALTKL +NGYYG+LV+M+RDAF+  ELVR+DC GL+KSD+KKI  KLRDLVPCI 
Sbjct: 301 GLAVPALTKLAKNGYYGSLVSMVRDAFICCELVRIDCQGLEKSDYKKIGCKLRDLVPCIL 360

Query: 363 VTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLV 401
           VT  KEQIVVWRG  ++P  +G FL  R+  +N   +LV
Sbjct: 361 VTFEKEQIVVWRGKDYKPLEDGYFLPDRELFDNPEGDLV 387

[Close]

BLAST of Spo00400.1 vs. NCBI nr
Match: gi|565344816|ref|XP_006339500.1| (PREDICTED: CRS2-associated factor 1, mitochondrial isoform X1 [Solanum tuberosum])

HSP 1 Score: 519.6 bits (1337), Expect = 4.800e-144
Identity = 265/389 (68.12%), Postives = 311/389 (79.95%), Query Frame = 1

		  
Query: 15  ICLSSVRRHLSTT---SSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSSQNLQSPNKIRK 74
           + LS+ R  LSTT   SS L +KYSF PPPSL PQN          PSS   QSP K + 
Sbjct: 13  LSLSTTRHLLSTTAAASSNLYSKYSFVPPPSLKPQN----------PSS--TQSPPKKQP 72

Query: 75  KPLYRPPSTLE-TGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPFGPGRVKREWT 134
           KP YRPPS+L+ TGEKPL+S LPFDFR+SYTES+  VRPIGLR PKYSPFGPG++ R WT
Sbjct: 73  KPRYRPPSSLDRTGEKPLQSKLPFDFRFSYTESSTDVRPIGLREPKYSPFGPGKLDRVWT 132

Query: 135 GVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVDMCERSKVKKQ 194
           GVCAPV  PKV    G  ED+  + EKRR+ RE + G+PLT+AE+K LV+ C+R K K+Q
Sbjct: 133 GVCAPVVDPKV----GSPEDEKTVEEKRRVARERIQGEPLTNAERKALVERCQRHKTKRQ 192

Query: 195 VNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIHRQSGL 254
           VNLGRDGLTHNMLNDIHN+WK +EA+RIKCMGVPT+DM+NV TQLEDKTFGKIIHR  GL
Sbjct: 193 VNLGRDGLTHNMLNDIHNNWKHSEAVRIKCMGVPTVDMKNVCTQLEDKTFGKIIHRHGGL 252

Query: 255 LVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGLAVPALTK 314
           LVLYRGRNY  KKRPVIPLMLWKP EPVYP+LIKTT++GLSIEETK +RKRGLAVPALTK
Sbjct: 253 LVLYRGRNYHPKKRPVIPLMLWKPHEPVYPRLIKTTIDGLSIEETKEMRKRGLAVPALTK 312

Query: 315 LGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQIV 374
           L +NGYYG+LV M+RDAFL EELVR+DC GL KSD+KKI  KLRDLVPCI VT  KEQIV
Sbjct: 313 LAKNGYYGSLVPMVRDAFLTEELVRIDCKGLQKSDYKKIGCKLRDLVPCILVTFDKEQIV 372

Query: 375 VWRGPHHEPAGNGTFLSARDSVENSIDNL 400
           VWRG +++P+ +G FL+ R+  ++S ++L
Sbjct: 373 VWRGQNYKPSEDGFFLTEREPFDHSGNDL 385

[Close]

BLAST of Spo00400.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7F7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_098070 PE=4 SV=1)

HSP 1 Score: 812.4 bits (2097), Expect = 2.500e-232
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 1

		  
Query: 1   MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSS 60
           MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSS
Sbjct: 1   MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSS 60

Query: 61  QNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPF 120
           QNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPF
Sbjct: 61  QNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPF 120

Query: 121 GPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVD 180
           GPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVD
Sbjct: 121 GPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVD 180

Query: 181 MCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTF 240
           MCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTF
Sbjct: 181 MCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTF 240

Query: 241 GKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRK 300
           GKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRK
Sbjct: 241 GKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRK 300

Query: 301 RGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCI 360
           RGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCI
Sbjct: 301 RGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCI 360

Query: 361 PVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS 404
           PVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS
Sbjct: 361 PVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS 403

[Close]

BLAST of Spo00400.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFL6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019830 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 2.600e-173
Identity = 313/410 (76.34%), Postives = 345/410 (84.15%), Query Frame = 1

		  
Query: 1   MFIFLIPRQNLRHRICLSSVR----RHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNP 60
           MFI +I R+N  +   LSS+     RHLST+SSKL TKYSFT PPSL PQN    P+ NP
Sbjct: 1   MFISIIHRKNFHNHHSLSSLLLLHYRHLSTSSSKLHTKYSFTSPPSLHPQNSLSKPSQNP 60

Query: 61  KPSSQNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPK 120
                  QS   I +KP YRPPS+LETG+KPLRSNLPFDFRYSYTESNPSVRPIGLR PK
Sbjct: 61  -------QSQTLISEKPPYRPPSSLETGQKPLRSNLPFDFRYSYTESNPSVRPIGLREPK 120

Query: 121 YSPFGPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSE---LVEKRRLMRETLLGQPLTDA 180
           YSPFGPGRV REWTGVCAPVKSPKVRSVDG+V+DD +   L EK+RLMRE +LG  LTDA
Sbjct: 121 YSPFGPGRVAREWTGVCAPVKSPKVRSVDGKVDDDDDDPKLEEKKRLMREKVLGDALTDA 180

Query: 181 EKKILVDMCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLT 240
           E KILVD C+R K K+Q+NLGRDGLTHNMLNDIHNHWK  EAIRIKCMGVPTIDM+NV T
Sbjct: 181 EIKILVDKCQRGKTKRQINLGRDGLTHNMLNDIHNHWKHTEAIRIKCMGVPTIDMKNVFT 240

Query: 241 QLEDKTFGKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIE 300
           QLEDKTFGKIIHR  GLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPK+IKTT+EGLSIE
Sbjct: 241 QLEDKTFGKIIHRHGGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKMIKTTIEGLSIE 300

Query: 301 ETKVLRKRGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKL 360
           ETKVLRKRG+AVPALTKL RNGYYGNLV M+RDAFLVEELVR+DCTGLDKSD KKI VKL
Sbjct: 301 ETKVLRKRGIAVPALTKLVRNGYYGNLVAMVRDAFLVEELVRIDCTGLDKSDLKKIGVKL 360

Query: 361 RDLVPCIPVTLMKEQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS 404
           RDLVPCIPVT +KEQIVVWRGP++E   +G F + R+  E ++D+LVWDS
Sbjct: 361 RDLVPCIPVTFVKEQIVVWRGPNYELVEDGLFRTEREPFEKTVDDLVWDS 403

[Close]

BLAST of Spo00400.1 vs. UniProtKB/TrEMBL
Match: M0ZFY9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401000006 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 3.400e-144
Identity = 265/389 (68.12%), Postives = 311/389 (79.95%), Query Frame = 1

		  
Query: 15  ICLSSVRRHLSTT---SSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSSQNLQSPNKIRK 74
           + LS+ R  LSTT   SS L +KYSF PPPSL PQN          PSS   QSP K + 
Sbjct: 13  LSLSTTRHLLSTTAAASSNLYSKYSFVPPPSLKPQN----------PSS--TQSPPKKQP 72

Query: 75  KPLYRPPSTLE-TGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPFGPGRVKREWT 134
           KP YRPPS+L+ TGEKPL+S LPFDFR+SYTES+  VRPIGLR PKYSPFGPG++ R WT
Sbjct: 73  KPRYRPPSSLDRTGEKPLQSKLPFDFRFSYTESSTDVRPIGLREPKYSPFGPGKLDRVWT 132

Query: 135 GVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVDMCERSKVKKQ 194
           GVCAPV  PKV    G  ED+  + EKRR+ RE + G+PLT+AE+K LV+ C+R K K+Q
Sbjct: 133 GVCAPVVDPKV----GSPEDEKTVEEKRRVARERIQGEPLTNAERKALVERCQRHKTKRQ 192

Query: 195 VNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIHRQSGL 254
           VNLGRDGLTHNMLNDIHN+WK +EA+RIKCMGVPT+DM+NV TQLEDKTFGKIIHR  GL
Sbjct: 193 VNLGRDGLTHNMLNDIHNNWKHSEAVRIKCMGVPTVDMKNVCTQLEDKTFGKIIHRHGGL 252

Query: 255 LVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGLAVPALTK 314
           LVLYRGRNY  KKRPVIPLMLWKP EPVYP+LIKTT++GLSIEETK +RKRGLAVPALTK
Sbjct: 253 LVLYRGRNYHPKKRPVIPLMLWKPHEPVYPRLIKTTIDGLSIEETKEMRKRGLAVPALTK 312

Query: 315 LGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQIV 374
           L +NGYYG+LV M+RDAFL EELVR+DC GL KSD+KKI  KLRDLVPCI VT  KEQIV
Sbjct: 313 LAKNGYYGSLVPMVRDAFLTEELVRIDCKGLQKSDYKKIGCKLRDLVPCILVTFDKEQIV 372

Query: 375 VWRGPHHEPAGNGTFLSARDSVENSIDNL 400
           VWRG +++P+ +G FL+ R+  ++S ++L
Sbjct: 373 VWRGQNYKPSEDGFFLTEREPFDHSGNDL 385

[Close]

BLAST of Spo00400.1 vs. UniProtKB/TrEMBL
Match: A0A0V0IIF2_SOLCH (Putative CRS2-associated factor 1, mitochondrial-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 6.300e-143
Identity = 263/390 (67.44%), Postives = 310/390 (79.49%), Query Frame = 1

		  
Query: 15  ICLSSVRRHLSTT----SSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSSQNLQSPNKIR 74
           + LS+ R   STT    SS L +KYSF PPPSL PQ+          PSS   QSP K +
Sbjct: 13  LSLSATRHLFSTTTAAASSNLYSKYSFVPPPSLKPQS----------PSS--TQSPPKKQ 72

Query: 75  KKPLYRPPSTLE-TGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPFGPGRVKREW 134
            KP YRPPS+L+ TGEKPL+S LPFDFR+SYTES+  VRPIGLR PKYSPFGPG++ R W
Sbjct: 73  PKPRYRPPSSLDRTGEKPLQSKLPFDFRFSYTESSTDVRPIGLREPKYSPFGPGKLDRVW 132

Query: 135 TGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVDMCERSKVKK 194
           TGVCAPV  PKV    G  ED+  + EKRR+ RE + G+PLT+AE+K LV+ C+R K K+
Sbjct: 133 TGVCAPVVDPKV----GSPEDEKTVEEKRRVARERIQGEPLTNAERKALVERCQRHKTKR 192

Query: 195 QVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIHRQSG 254
           QVNLGRDGLTHNMLNDIHN+WK +EA+RIKCMGVPT+DM+NV TQLEDKTFGKIIHR  G
Sbjct: 193 QVNLGRDGLTHNMLNDIHNNWKHSEAVRIKCMGVPTVDMKNVCTQLEDKTFGKIIHRHGG 252

Query: 255 LLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGLAVPALT 314
           LLVLYRGRNY  KKRPVIPLMLWKP EPVYP+LIKTT++GLSIEETK +RKRGLAVPALT
Sbjct: 253 LLVLYRGRNYHPKKRPVIPLMLWKPHEPVYPRLIKTTIDGLSIEETKEMRKRGLAVPALT 312

Query: 315 KLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQI 374
           KL +NGYYG+LV M+RDAFL EELVR+DC GL KSD+KKI  KLRDLVPCI VT  KEQI
Sbjct: 313 KLAKNGYYGSLVPMVRDAFLXEELVRIDCKGLQKSDYKKIGCKLRDLVPCILVTFDKEQI 372

Query: 375 VVWRGPHHEPAGNGTFLSARDSVENSIDNL 400
           VVWRG +++P+ +G FL+ R+  ++S ++L
Sbjct: 373 VVWRGQNYKPSEDGFFLTEREXFDHSGNDL 386

[Close]

BLAST of Spo00400.1 vs. UniProtKB/TrEMBL
Match: D7U7P9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01220 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 1.100e-142
Identity = 261/397 (65.74%), Postives = 311/397 (78.34%), Query Frame = 1

		  
Query: 13  HRICLSSVRRHLSTT-----SSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSSQNLQSPN 72
           H   ++   R LS++     SS+LL  YSF  P S       QNPNPNP+PS+       
Sbjct: 15  HSAAVTLSTRRLSSSAPPSPSSRLLDHYSFKSPVS-----PFQNPNPNPEPST------- 74

Query: 73  KIRKKPLYRPPSTLE-TGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPFGPGRVK 132
           K ++KP YRPPS+L+ TG+KPLRS+LPFDFRYSYTES+P+VRPIGLR PKYSPFGPG + 
Sbjct: 75  KKKQKPPYRPPSSLDRTGKKPLRSDLPFDFRYSYTESSPAVRPIGLREPKYSPFGPGLLD 134

Query: 133 REWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVDMCERSK 192
           REWTGVCAP   PKVRSVDG+  +D +L EKRR MRE  LG+PLT AE+KILV+ C+R +
Sbjct: 135 REWTGVCAPAVDPKVRSVDGK--EDPKLEEKRRRMREKTLGEPLTAAERKILVEKCQRHR 194

Query: 193 VKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIHR 252
            K+Q+NLGRDGLTHNMLNDIHNHWK AEA+RIKCMGVPT+DM+NV TQLEDKT GK+IHR
Sbjct: 195 TKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIHR 254

Query: 253 QSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGLAVP 312
           Q GLLVLYRGRNY  KKRPVIPLMLW+P EP+YP+LIKT ++GLSIEETK +RKRGLAVP
Sbjct: 255 QGGLLVLYRGRNYHPKKRPVIPLMLWRPHEPIYPRLIKTVIDGLSIEETKEMRKRGLAVP 314

Query: 313 ALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVTLMK 372
           ALTKL +NGYYG+LV M+RDAFL +EL+R+DC GL++ D+KKI  KLRD VPCI VT  K
Sbjct: 315 ALTKLAKNGYYGSLVPMVRDAFLTDELIRIDCQGLERRDYKKIGCKLRDFVPCILVTFEK 374

Query: 373 EQIVVWRGPHHEPAGNGTFLSARDSVENSIDNLVWDS 404
           EQIVVWRG  ++P   G F   R+S++N      WDS
Sbjct: 375 EQIVVWRGKDYKPTEAGQFPIERESLDN------WDS 391

[Close]

BLAST of Spo00400.1 vs. ExPASy Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.800e-130
Identity = 235/401 (58.60%), Postives = 301/401 (75.06%), Query Frame = 1

		  
Query: 1   MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSS 60
           MF+  + R N      L+      + +SS+L   Y+F  PP L   + ++NP+ N K + 
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISSSRLRDLYNFQSPPPLS-SSASENPDFNQKNN- 60

Query: 61  QNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPF 120
                 NK + KP YRPPS+LE G K + S+LPFDFR+SYTES  +VRPIGLR PKYSPF
Sbjct: 61  ------NKKKPKPQYRPPSSLE-GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPF 120

Query: 121 GPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVD 180
           GP R+ REWTGVCAP  +PKV SVDG   +D +L EKRR +RE + G  LT+AE+K LV+
Sbjct: 121 GPDRLDREWTGVCAPAVNPKVESVDGV--EDPKLEEKRRKVREKIQGASLTEAERKFLVE 180

Query: 181 MCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTF 240
           +C+R+K K+QVNLGRDGLTHNMLND++NHWK AEA+R+KC+GVPT+DM+NV+  LEDKTF
Sbjct: 181 LCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTF 240

Query: 241 GKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRK 300
           G+++ + SG LVLYRGRNY  KKRP IPLMLWKP EPVYP+LIKTT++GLSI+ETK +RK
Sbjct: 241 GQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRK 300

Query: 301 RGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCI 360
           +GLAVPALTKL +NGYYG+LV M+RDAFLV ELVR+DC GL++ D+KKI  KLRDLVPCI
Sbjct: 301 KGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCI 360

Query: 361 PVTLMKEQIVVWRGPHHEPAGN----GTFLSARDSVENSID 398
            VT  KEQ+V+WRG  ++P        +F+    S+++ +D
Sbjct: 361 LVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDVD 390

[Close]

BLAST of Spo00400.1 vs. ExPASy Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 7.500e-121
Identity = 220/362 (60.77%), Postives = 269/362 (74.31%), Query Frame = 1

		  
Query: 29  SKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSSQNLQSPNKIRKKPLYRPPSTLETGEKPL 88
           S LL +Y F PP SL P +           +S +  +  +  KKP YRPPS+L+ G +P 
Sbjct: 23  SGLLDRYGFVPPASLTPHS-----------ASDDGGAKKRRPKKPPYRPPSSLDRGGRPA 82

Query: 89  -RSNLPFDFRYSYTESNPSVRPIGLRGPKYSPFGPGRVKREWTGVCAPVKSPKVRSVDGE 148
            RS+LPFDFR+SYTES+P  +PIGLR PKYSPFGPGR+ R WTG+CAP     +R  D  
Sbjct: 83  ARSDLPFDFRFSYTESSPGDKPIGLREPKYSPFGPGRLDRPWTGLCAPAVDTTLR--DAH 142

Query: 149 VED-----DSELVEKRRLMRETLLGQPLTDAEKKILVDMCERSKVKKQVNLGRDGLTHNM 208
            +D     + EL E RR  RE +LG+PLT AE+  LV  C++S+ KKQ+NLGRDGLTHNM
Sbjct: 143 ADDPAPAAERELEEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNM 202

Query: 209 LNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIHRQSGLLVLYRGRNYKSK 268
           LNDIHNHWK+ EA+R+KC+GVPT+DM+NV  QLEDKT G IIHR  G L+LYRGR+Y  K
Sbjct: 203 LNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPK 262

Query: 269 KRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGLAVPALTKLGRNGYYGNLVT 328
           KRPVIPLMLWKP EPVYP+LIKTT+EGL++EETK +RK+GL VP LTKL +NGYY +LV 
Sbjct: 263 KRPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVP 322

Query: 329 MIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQIVVWRGPHHEPAGN 385
           M+RDAFL +ELVR+D  GL KSD++KI VKLRDLVPCI V+  KEQI+VWRG  +    N
Sbjct: 323 MVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDY----N 367

[Close]

BLAST of Spo00400.1 vs. ExPASy Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 4.100e-87
Identity = 161/326 (49.39%), Postives = 223/326 (68.40%), Query Frame = 1

		  
Query: 53  NPNPKPSSQNLQSPNKIRKKPLYRPPSTLETGEK---PLRSNLPFDFRYSYTESNPSVRP 112
           +P   P S+  + P + +K+   +   + E       P+ S+LPFDFRYSY+E+NP + P
Sbjct: 35  DPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIEP 94

Query: 113 IGLRGPK-YSPFGPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQ 172
           IG R PK +SPFGPGR+ R+WTG  A + SP++        D S+ VE+R      +LG+
Sbjct: 95  IGFREPKRFSPFGPGRLDRKWTGTTA-LASPEI--------DQSQWVEERA----RVLGE 154

Query: 173 PLTDAEKKILVDMCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDM 232
            LT+ E   L++    S   +Q+NLG+ G+THNM++DIHNHWK AEA+RIKC+GVPT+DM
Sbjct: 155 TLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDM 214

Query: 233 ENVLTQLEDKTFGKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVE 292
           +N+   LE+K+ GKI++R   +LVLYRGRNY  K RP+IPLMLWKP  P+YP+L+K   +
Sbjct: 215 DNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVAD 274

Query: 293 GLSIEETKVLRKRGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKK 352
           GL  EETK +R RGL  PAL KL RNG Y N+V  +R+ F  EE+VR+DCT +  SD K+
Sbjct: 275 GLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKR 334

Query: 353 IAVKLRDLVPCIPVTLMKEQIVVWRG 375
           I VKL+++VPC+P+    EQI++WRG
Sbjct: 335 IGVKLKEMVPCVPILFKDEQIILWRG 347

[Close]

BLAST of Spo00400.1 vs. ExPASy Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 307.8 bits (787), Expect = 1.800e-82
Identity = 161/338 (47.63%), Postives = 217/338 (64.20%), Query Frame = 1

		  
Query: 44  PPQNQNQNPNPNPKPSSQNLQSPNKIRKKP------LYRPPSTLETGEKPLRSNLPFDFR 103
           PP +   +  P  + + +  ++P+K +KK         RPP       +P  S+LPFDFR
Sbjct: 32  PPFSDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPP-------EPASSDLPFDFR 91

Query: 104 YSYTESNPSVRPIGLRGP-KYSPFGPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVE 163
           YSY+E++P+ RPIG R P ++SPFGPGR+ R W GV A                  E   
Sbjct: 92  YSYSETDPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAAAR-------------GEGAG 151

Query: 164 KRRLMRETLLGQPLTDAEKKILVDMCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAI 223
                RE +LG+PL + E   LV+    S   +Q+NLG+ G+THNM++DIHNHWK AEA+
Sbjct: 152 AAATSREEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAV 211

Query: 224 RIKCMGVPTIDMENVLTQLEDKTFGKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQE 283
           RIKC+GVPT+DM+N+   LEDKT GK+I+R   +L+LYRGRNY  K+RP IPLMLWKP  
Sbjct: 212 RIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLA 271

Query: 284 PVYPKLIKTTVEGLSIEETKVLRKRGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRV 343
           P+YP+L++   +GL+ E+TK LR  GL    L KL RNG Y N+V  +R+AF   E+VR+
Sbjct: 272 PIYPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRL 331

Query: 344 DCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQIVVWRG 375
           DC+ +  SD KKI VKLRDLVPC+P+    EQI++WRG
Sbjct: 332 DCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRG 349

[Close]

BLAST of Spo00400.1 vs. ExPASy Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.600e-70
Identity = 142/300 (47.33%), Postives = 188/300 (62.67%), Query Frame = 1

		  
Query: 93  PFDFRYSYTESNPSVRPIGLRGPKYSPFGPGRVKREWTGVCAPVKSPK--------VRSV 152
           PF+F+YSYTE+ P  RP+ LR   + PFGP    R WTG     KS K        V   
Sbjct: 91  PFEFQYSYTEA-PRARPVALREAPFMPFGPEATPRPWTGRKPLPKSRKELPEFDSFVLPA 150

Query: 153 DGE-----VEDDSELV-----EKRRLMRETLLGQPLTDAEKKILVDMCERSKVKKQVNLG 212
            G+     V+     +       + + RE +LG+PLT  E   LV    +S  K+Q+N+G
Sbjct: 151 PGKKGVKPVQSPGPFLAGMEPRYQSVSREDILGEPLTKEEVSELVKGSLKS--KRQLNMG 210

Query: 213 RDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIHRQSGLLVLY 272
           RDGLTHNML +IH+HWK     +IKC GV TIDM+N+  QLE+K  GK+IHRQ G++ L+
Sbjct: 211 RDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNICHQLEEKVGGKVIHRQGGVIFLF 270

Query: 273 RGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGLAVPALTKLGRN 332
           RGRNY  + RP  PLMLWKP  PVYP+L+     GL+ +E   +R RG  +P + KLG+N
Sbjct: 271 RGRNYNYRTRPCFPLMLWKPVAPVYPRLVTKVPGGLTPDEATEMRTRGHQLPPICKLGKN 330

Query: 333 GYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQIVVWRG 375
           G Y NLV  +R+AF   +LVRVDC+GL+KSD +KI  KL+DLVPCI ++   E I++WRG
Sbjct: 331 GVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRG 387

[Close]

BLAST of Spo00400.1 vs. TAIR (Arabidopsis)
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 467.2 bits (1201), Expect = 1.000e-131
Identity = 235/401 (58.60%), Postives = 301/401 (75.06%), Query Frame = 1

		  
Query: 1   MFIFLIPRQNLRHRICLSSVRRHLSTTSSKLLTKYSFTPPPSLPPQNQNQNPNPNPKPSS 60
           MF+  + R N      L+      + +SS+L   Y+F  PP L   + ++NP+ N K + 
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISSSRLRDLYNFQSPPPLS-SSASENPDFNQKNN- 60

Query: 61  QNLQSPNKIRKKPLYRPPSTLETGEKPLRSNLPFDFRYSYTESNPSVRPIGLRGPKYSPF 120
                 NK + KP YRPPS+LE G K + S+LPFDFR+SYTES  +VRPIGLR PKYSPF
Sbjct: 61  ------NKKKPKPQYRPPSSLE-GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPF 120

Query: 121 GPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQPLTDAEKKILVD 180
           GP R+ REWTGVCAP  +PKV SVDG   +D +L EKRR +RE + G  LT+AE+K LV+
Sbjct: 121 GPDRLDREWTGVCAPAVNPKVESVDGV--EDPKLEEKRRKVREKIQGASLTEAERKFLVE 180

Query: 181 MCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTF 240
           +C+R+K K+QVNLGRDGLTHNMLND++NHWK AEA+R+KC+GVPT+DM+NV+  LEDKTF
Sbjct: 181 LCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTF 240

Query: 241 GKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRK 300
           G+++ + SG LVLYRGRNY  KKRP IPLMLWKP EPVYP+LIKTT++GLSI+ETK +RK
Sbjct: 241 GQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRK 300

Query: 301 RGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCI 360
           +GLAVPALTKL +NGYYG+LV M+RDAFLV ELVR+DC GL++ D+KKI  KLRDLVPCI
Sbjct: 301 KGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCI 360

Query: 361 PVTLMKEQIVVWRGPHHEPAGN----GTFLSARDSVENSID 398
            VT  KEQ+V+WRG  ++P        +F+    S+++ +D
Sbjct: 361 LVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDVD 390

[Close]

BLAST of Spo00400.1 vs. TAIR (Arabidopsis)
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 323.2 bits (827), Expect = 2.300e-88
Identity = 161/326 (49.39%), Postives = 223/326 (68.40%), Query Frame = 1

		  
Query: 53  NPNPKPSSQNLQSPNKIRKKPLYRPPSTLETGEK---PLRSNLPFDFRYSYTESNPSVRP 112
           +P   P S+  + P + +K+   +   + E       P+ S+LPFDFRYSY+E+NP + P
Sbjct: 35  DPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIEP 94

Query: 113 IGLRGPK-YSPFGPGRVKREWTGVCAPVKSPKVRSVDGEVEDDSELVEKRRLMRETLLGQ 172
           IG R PK +SPFGPGR+ R+WTG  A + SP++        D S+ VE+R      +LG+
Sbjct: 95  IGFREPKRFSPFGPGRLDRKWTGTTA-LASPEI--------DQSQWVEERA----RVLGE 154

Query: 173 PLTDAEKKILVDMCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDM 232
            LT+ E   L++    S   +Q+NLG+ G+THNM++DIHNHWK AEA+RIKC+GVPT+DM
Sbjct: 155 TLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDM 214

Query: 233 ENVLTQLEDKTFGKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVE 292
           +N+   LE+K+ GKI++R   +LVLYRGRNY  K RP+IPLMLWKP  P+YP+L+K   +
Sbjct: 215 DNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVAD 274

Query: 293 GLSIEETKVLRKRGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKK 352
           GL  EETK +R RGL  PAL KL RNG Y N+V  +R+ F  EE+VR+DCT +  SD K+
Sbjct: 275 GLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKR 334

Query: 353 IAVKLRDLVPCIPVTLMKEQIVVWRG 375
           I VKL+++VPC+P+    EQI++WRG
Sbjct: 335 IGVKLKEMVPCVPILFKDEQIILWRG 347

[Close]

BLAST of Spo00400.1 vs. TAIR (Arabidopsis)
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 261.9 bits (668), Expect = 6.400e-70
Identity = 156/366 (42.62%), Postives = 218/366 (59.56%), Query Frame = 1

		  
Query: 41  PSLP-----PQNQNQNPNPN-----PKPSSQNLQSPNKIRKKPLYRPPSTLETGEKPLRS 100
           PSLP     P  +++   P+     PK   +   SP ++  KP  +     E G   + +
Sbjct: 91  PSLPSARSIPGRRSKYSKPDSGPNRPKNKPRVPDSPPQLDAKPEVK---LSEDGLTYVIN 150

Query: 101 NLPFDFRYSYTESNPSVRPIGLRGPKYSPFGPGRVKREWTGVCAPVKSPKVRSVDGEVED 160
             PF+F+YSYTE+ P V+P+ LR P Y+PFGP  + R WTG     ++P  +S     E 
Sbjct: 151 GAPFEFKYSYTET-PKVKPLKLREPAYAPFGPTTMGRPWTG-----RAPLPQSQKTPREF 210

Query: 161 DS---ELVEKRRL-------------------MRETLLGQPLTDAEKKILVDMCERSKVK 220
           DS     V K+ L                    +E +LG+PLT  E + LV  C   K  
Sbjct: 211 DSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTSC--LKTT 270

Query: 221 KQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIHRQS 280
           +Q+N+GRDGLTHNMLN+IH+ WK     +IKC GV T+DM+NV  QLE+K  GK+I+R+ 
Sbjct: 271 RQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRG 330

Query: 281 GLLVLYRGRNYKSKKRPVIPLMLWKPQEPVYPKLIKTTVEGLSIEETKVLRKRGLAVPAL 340
           G+L L+RGRNY  + RP  PLMLWKP  PVYP+LI+   EGL+ +E   +R++G  +  +
Sbjct: 331 GVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPI 390

Query: 341 TKLGRNGYYGNLVTMIRDAFLVEELVRVDCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQ 375
            KLG+NG Y +LV  +++AF V ELVR+DC G+  SD +KI  KL+DLVPC+ V+   EQ
Sbjct: 391 CKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQ 445

[Close]

BLAST of Spo00400.1 vs. TAIR (Arabidopsis)
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 228.0 bits (580), Expect = 1.000e-59
Identity = 111/218 (50.92%), Postives = 148/218 (67.89%), Query Frame = 1

		  
Query: 157 KRRLMRETLLGQPLTDAEKKILVDMCERSKVKKQVNLGRDGLTHNMLNDIHNHWKDAEAI 216
           K  + RE +LG+PL   EK +L+         +QVNLGRDG THNML  IH+HWK     
Sbjct: 190 KEGMNREEVLGEPLKRWEKGMLIK--PHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVC 249

Query: 217 RIKCMGVPTIDMENVLTQLEDKTFGKIIHRQSGLLVLYRGRNYKSKKRPVIPLMLWKPQE 276
           +++C GVPT+DM NV   LE+KT G+IIHR  G++ L+RGRNY  + RP  PLMLWKP  
Sbjct: 250 KVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAA 309

Query: 277 PVYPKLIKTTVEGLSIEETKVLRKRGLAVPALTKLGRNGYYGNLVTMIRDAFLVEELVRV 336
           PVYPKLI+   EGL+ EE    R +G ++  + KL +NG Y +LV  +RDAF +  LV+V
Sbjct: 310 PVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKV 369

Query: 337 DCTGLDKSDHKKIAVKLRDLVPCIPVTLMKEQIVVWRG 375
           DC GL+ SD+KKI  KL++LVPC+ ++   EQI++WRG
Sbjct: 370 DCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRG 405

[Close]

BLAST of Spo00400.1 vs. TAIR (Arabidopsis)
Match: AT3G01370.1 (CRM family member 2)

HSP 1 Score: 61.6 bits (148), Expect = 1.300e-9
Identity = 25/75 (33.33%), Postives = 45/75 (60.00%), Query Frame = 1

		  
Query: 186 KVKKQVNLGRDGLTHNMLNDIHNHWKDAEAIRIKCMGVPTIDMENVLTQLEDKTFGKIIH 245
           ++ K++ +G+ G+T  ++N IH  W+  E ++I C  +  ++M+     LE KT G +I 
Sbjct: 180 RLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIW 239

Query: 246 RQSGLLVLYRGRNYK 261
           R    ++LYRG NY+
Sbjct: 240 RSGSKILLYRGVNYQ 254

The following BLAST results are available for this feature:

BLAST of Spo00400.1 vs. NCBI nr
BLAST of Spo00400.1 vs. UniProtKB/TrEMBL
BLAST of Spo00400.1 vs. ExPASy Swiss-Prot
BLAST of Spo00400.1 vs. TAIR (Arabidopsis)

BLAST of Spo00400.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902206435\|gb\|KNA15468.1\|	3.6e-232	100.	hypothetical protein SOVF_0980...	[more]
gi\|731361392\|ref\|XP_010692330.1\|	3.8e-173	76.3	PREDICTED: CRS2-associated fac...	[more]
gi\|698491505\|ref\|XP_009792167.1\|	5.7e-145	66.3	PREDICTED: CRS2-associated fac...	[more]
gi\|645254005\|ref\|XP_008232837.1\|	3.7e-144	65.9	PREDICTED: CRS2-associated fac...	[more]
gi\|565344816\|ref\|XP_006339500.1\|	4.8e-144	68.1	PREDICTED: CRS2-associated fac...	[more]

BLAST of Spo00400.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9R7F7_SPIOL	2.5e-232	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BFL6_BETVU	2.6e-173	76.3	Uncharacterized protein OS=Bet...	[more]
M0ZFY9_SOLTU	3.4e-144	68.1	Uncharacterized protein OS=Sol...	[more]
A0A0V0IIF2_SOLCH	6.3e-143	67.4	Putative CRS2-associated facto...	[more]
D7U7P9_VITVI	1.1e-142	65.7	Putative uncharacterized prote...	[more]

BLAST of Spo00400.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
CAF1M_ARATH	1.8e-130	58.6	CRS2-associated factor 1, mito...	[more]
CAF1M_ORYSJ	7.5e-121	60.7	CRS2-associated factor 1, mito...	[more]
CAF2M_ARATH	4.1e-87	49.3	CRS2-associated factor 2, mito...	[more]
CAF2M_ORYSJ	1.8e-82	47.6	CRS2-associated factor 2, mito...	[more]
CAF1P_MAIZE	1.6e-70	47.3	CRS2-associated factor 1, chlo...	[more]

BLAST of Spo00400.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT4G31010.1	1.0e-131	58.6	RNA-binding CRS1 / YhbY (CRM) ...	[more]
AT5G54890.1	2.3e-88	49.3	RNA-binding CRS1 / YhbY (CRM) ...	[more]
AT2G20020.1	6.4e-70	42.6	RNA-binding CRS1 / YhbY (CRM) ...	[more]
AT1G23400.1	1.0e-59	50.9	RNA-binding CRS1 / YhbY (CRM) ...	[more]
AT3G01370.1	1.3e-9	33.3	CRM family member 2	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	GENE3D	3.30.110.60		coord: 169..264 score: 8.5E-21coord: 290..378 score: 3.1
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 170..255 score: 1.7E-18coord: 291..373 score: 2.9
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 290..373 score: 2.6E-10coord: 170..255 score: 1.7
IPR001890	RNA-binding, CRM domain	PROFILE	PS51295	CRM	coord: 288..384 score: 15.488coord: 168..266 score: 1
IPR001890	RNA-binding, CRM domain	unknown	SSF75471	YhbY-like	coord: 290..377 score: 1.44E-18coord: 169..265 score: 6.8
None	No IPR available	PANTHER	PTHR31846	FAMILY NOT NAMED	coord: 11..395 score: 6.6E
None	No IPR available	PANTHER	PTHR31846:SF9	CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL	coord: 11..395 score: 6.6E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006397	mRNA processing
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0097031	obsolete mitochondrial respiratory chain complex I biogenesis
biological_process	GO:0097034	obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0010048	vernalization response
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0009536	plastid
molecular_function	GO:0003723	RNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02278	0.75	Barchart \| Table
Spo22715	0.74	Barchart \| Table
Spo17161	0.72	Barchart \| Table
Spo23767	0.72	Barchart \| Table
Spo04908	0.72	Barchart \| Table
Spo22507	0.72	Barchart \| Table
Spo18828	0.72	Barchart \| Table
Spo00013	0.71	Barchart \| Table
Spo02513	0.71	Barchart \| Table
Spo12302	0.71	Barchart \| Table
Spo21802	0.71	Barchart \| Table
Spo01305	0.71	Barchart \| Table
Spo17491	0.70	Barchart \| Table
Spo20952	0.70	Barchart \| Table
Spo28098	0.69	Barchart \| Table
Spo06398	0.69	Barchart \| Table
Spo10916	0.69	Barchart \| Table
Spo11424	0.69	Barchart \| Table
Spo11951	0.69	Barchart \| Table
Spo19863	0.69	Barchart \| Table
Spo20387	0.69	Barchart \| Table
Spo09149	0.68	Barchart \| Table
Spo09060	0.68	Barchart \| Table
Spo02915	0.68	Barchart \| Table
Spo12959	0.68	Barchart \| Table
Spo22814	0.68	Barchart \| Table
Spo05640	0.68	Barchart \| Table
Spo06146	0.68	Barchart \| Table
Spo17712	0.68	Barchart \| Table
Spo23886	0.67	Barchart \| Table
Spo13029	0.67	Barchart \| Table
Spo14523	0.67	Barchart \| Table
Spo15630	0.67	Barchart \| Table
Spo06949	0.67	Barchart \| Table
Spo19218	0.67	Barchart \| Table
Spo24679	0.67	Barchart \| Table
Spo06670	0.66	Barchart \| Table
Spo20055	0.66	Barchart \| Table
Spo19712	0.66	Barchart \| Table
Spo11436	0.66	Barchart \| Table
Spo04377	0.66	Barchart \| Table
Spo02221	0.65	Barchart \| Table
Spo05733	0.65	Barchart \| Table
Spo09940	0.65	Barchart \| Table