Spo06668 (gene)

Overview
NameSpo06668
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 49124156 .. 49125235 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTGAATCAATATTTGTCAAGTGCAGTTTTAGAAGAGAGCTATAGTTGCTTAAAAAGTACCTTATTTGTGAAAATGCGTGTATCAACAATTTTAGGATCAAATTTAAATTGTGTTAGTGGCTTGATGTGTTTGATAATTGATATCCGGGTTAATTTATCACCTTTGCTATTTACAATCCGATAAACGTTGCTGTTTTCGTGATATTTAGGTGGCTTTCACAAGCATTAAGTCAATGGACATAATGCAAGATCAATTTCAAGTTTTGTAGTTGGATGTTTCAAACCGTTTTTCTGCGTGTATTTTCGGTGTTTTTTGGTTGGTATGGTACTTATTTTGAAAAAAACGTTGGAAATAACAACATTAAAATGAGTGTTTATTATTGCTTAAATCTATTTGGTCATTTGTGCGGCTGGTGTAGCGAGCGAATAGAAAGCTGACAGGAAGCAGCGTTACGTTCTGGCAACGCAGCGATTGCACGCGTCTTTGGGTAGCCACGCTAACGGCTGTGAAAAGAATCAAATTTCGAATTCCCCCTTTCTCTCTTGGCACAGAGTACCTCTTAAAATTATTAGGTTTTCTTTATTGAATTAAAAAGGCAACTTGCAGATATTACTGACTATCATTTAACTTTATTTGGGATTGGATTTCGTCTCCAAACATATTTTTGGGCTTTTATTATTCAAAAACTAAGACTGTGTTATTTTAGACTGAATTAAACTAGTTAAAATTGAATTGAATTGAATTGAATTGAATTGATTTATAATGAGCAATAAGTTTTCATTCAATTTTCTTGATACTCTCCCGAGAATAAGATAGATATTTTAATAGAAAGTAGTTAAGATCCTACTTGATAAATTTGTGTTCCTAGGCCGGAAATAGTAATTTTCTATTTTCGATGTTTCCCTACTTTGTTCATGTTTGTTTTGTTAATTTCAATAAAACTAAAATGATTTAATGCAGCGAGTTCTCCAGGTGGGATTAGTTCTAGTTGAGTTTTTTGAGTTTAGTACAATATTGATGGAGGACCGTCGAATTGGTTCGTTGATAAAGATTTATACGAGGTTGCAACAATAG

mRNA sequence

ATGATCTTGAATCAATATTTGTCAAGTGCAGTTTTAGAAGAGAGCTATAGTTGCTTAAAAAGTACCTTATTTGTGAAAATGCGTGTATCAACAATTTTAGGATCAAATTTAAATTGTGTTAGTGGCTTGATGTGTTTGATAATTGATATCCGGCGAGTTCTCCAGGTGGGATTAGTTCTAGTTGAGTTTTTTGAGTTTAGTACAATATTGATGGAGGACCGTCGAATTGGTTCGTTGATAAAGATTTATACGAGGTTGCAACAATAG

Coding sequence (CDS)

ATGATCTTGAATCAATATTTGTCAAGTGCAGTTTTAGAAGAGAGCTATAGTTGCTTAAAAAGTACCTTATTTGTGAAAATGCGTGTATCAACAATTTTAGGATCAAATTTAAATTGTGTTAGTGGCTTGATGTGTTTGATAATTGATATCCGGCGAGTTCTCCAGGTGGGATTAGTTCTAGTTGAGTTTTTTGAGTTTAGTACAATATTGATGGAGGACCGTCGAATTGGTTCGTTGATAAAGATTTATACGAGGTTGCAACAATAG

Protein sequence

MILNQYLSSAVLEESYSCLKSTLFVKMRVSTILGSNLNCVSGLMCLIIDIRRVLQVGLVLVEFFEFSTILMEDRRIGSLIKIYTRLQQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo06668.1Spo06668.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo06668.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06668.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06668.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06668.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0009107 lipoate biosynthetic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0051301 cell division
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0046838 phosphorylated carbohydrate dephosphorylation
biological_process GO:0006486 protein glycosylation
biological_process GO:0008152 metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009249 protein lipoylation
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009987 cellular process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0005983 starch catabolic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006432 phenylalanyl-tRNA aminoacylation
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0009328 phenylalanine-tRNA ligase complex
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0044446 intracellular organelle part
cellular_component GO:0005829 cytosol
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0004826 phenylalanine-tRNA ligase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:2001070 starch binding
molecular_function GO:0050308 sugar-phosphatase activity
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0016992 lipoate synthase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0019003 GDP binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo098420.73Barchart | Table
Spo173860.72Barchart | Table
Spo140840.72Barchart | Table
Spo018410.72Barchart | Table
Spo214310.71Barchart | Table
Spo038650.71Barchart | Table
Spo074150.71Barchart | Table
Spo022310.71Barchart | Table
Spo149420.71Barchart | Table
Spo163140.71Barchart | Table
Spo145890.70Barchart | Table
Spo056030.70Barchart | Table
Spo238560.70Barchart | Table
Spo233550.70Barchart | Table
Spo165840.70Barchart | Table
Spo154240.70Barchart | Table
Spo105680.70Barchart | Table
Spo048850.70Barchart | Table
Spo041040.69Barchart | Table
Spo015310.69Barchart | Table
Spo163860.69Barchart | Table
Spo012160.69Barchart | Table
Spo106610.69Barchart | Table
Spo078820.69Barchart | Table
Spo164210.69Barchart | Table
Spo198400.69Barchart | Table
Spo096990.69Barchart | Table
Spo235070.69Barchart | Table
Spo172350.68Barchart | Table
Spo172090.68Barchart | Table
Spo187090.68Barchart | Table
Spo229700.68Barchart | Table
Spo204970.68Barchart | Table
Spo065800.68Barchart | Table
Spo066670.68Barchart | Table
Spo092140.68Barchart | Table
Spo105000.68Barchart | Table
Spo110690.68Barchart | Table
Spo273520.68Barchart | Table
Spo030020.68Barchart | Table
Spo054440.67Barchart | Table
Spo020650.67Barchart | Table
Spo049850.67Barchart | Table
Spo018010.67Barchart | Table
Spo047030.67Barchart | Table
Spo208580.67Barchart | Table
Spo109660.67Barchart | Table
Spo250130.67Barchart | Table
Spo111900.67Barchart | Table
Spo262140.67Barchart | Table
Spo208520.67Barchart | Table
Spo113550.67Barchart | Table
Spo123640.67Barchart | Table
Spo027470.67Barchart | Table
Spo125940.67Barchart | Table
Spo201870.67Barchart | Table
Spo162180.67Barchart | Table
Spo139450.67Barchart | Table
Spo199360.67Barchart | Table
Spo196900.67Barchart | Table
Spo146950.67Barchart | Table
Spo185490.67Barchart | Table
Spo008120.67Barchart | Table
Spo021750.67Barchart | Table
Spo064640.67Barchart | Table
Spo234340.67Barchart | Table
Spo237710.67Barchart | Table
Spo133180.66Barchart | Table
Spo013130.66Barchart | Table
Spo013560.66Barchart | Table
Spo021150.66Barchart | Table
Spo022800.66Barchart | Table
Spo027490.66Barchart | Table
Spo028550.66Barchart | Table
Spo031490.66Barchart | Table
Spo050930.66Barchart | Table
Spo051270.66Barchart | Table
Spo070790.66Barchart | Table
Spo086800.66Barchart | Table
Spo099930.66Barchart | Table
Spo112430.66Barchart | Table
Spo113150.66Barchart | Table
Spo125070.66Barchart | Table
Spo134920.66Barchart | Table
Spo149950.66Barchart | Table
Spo150890.66Barchart | Table
Spo166870.66Barchart | Table
Spo168040.66Barchart | Table
Spo171230.66Barchart | Table
Spo202400.66Barchart | Table
Spo221850.66Barchart | Table
Spo229400.66Barchart | Table
Spo236110.66Barchart | Table
Spo256140.66Barchart | Table
Spo268330.66Barchart | Table
Spo268340.66Barchart | Table
Spo003970.65Barchart | Table
Spo022540.65Barchart | Table
Spo093670.65Barchart | Table
Spo091230.65Barchart | Table
Spo238890.65Barchart | Table
Spo245900.65Barchart | Table
Spo247810.65Barchart | Table
Spo248410.65Barchart | Table
Spo206390.65Barchart | Table
Spo037350.65Barchart | Table
Spo013970.65Barchart | Table
Spo192450.65Barchart | Table
Spo175470.65Barchart | Table
Spo172200.65Barchart | Table